{"meta":{"query_hash":"e0b24d53482f","filters":{"topic":"Bacterial Infections and Vaccines"},"cohort_total":1642,"direct_labels_cover":6,"predictions_cover":1642,"exported":1642,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/e0b24d53482f","api":"https://metacan.xera.ac/api/v1/cohort?topic=Bacterial+Infections+and+Vaccines"},"results":[{"id":"W1019393731","doi":"10.1093/pch/18.10.543","title":"How best to describe the risk of meningococcal B infection?","year":2013,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Meningococcal disease; Meningococcal Infections; Virology; Neisseria meningitidis; Biology; Genetics","score_opus":0.013298735112081015,"score_gpt":0.24849646308749107,"score_spread":0.23519772797541005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1019393731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9816717,0.0019626291,0.00068817823,0.01292084,0.0016044949,0.0006964749,0.000051223138,0.000056317564,0.0003481239],"genre_scores_gemma":[0.996868,0.0017156824,0.000121483026,0.0004158791,0.0003540268,0.000068688685,0.000019665675,0.000013997192,0.00042258846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989177,0.00025766954,0.00027905218,0.00018990475,0.000020129217,0.00033555905],"domain_scores_gemma":[0.99915355,0.00015541037,0.00022291842,0.00027995525,0.00013299705,0.000055152705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037559864,0.00013315958,0.0002393193,0.00013681024,0.0005446242,0.000038525683,0.00012752984,0.00012805375,0.0001858455],"category_scores_gemma":[0.00018463879,0.00008774925,0.00009745139,0.00039582216,0.000043156713,0.00009929542,0.0000783789,0.00035490017,0.0004136841],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052213472,0.0006619822,0.8233058,0.00009845453,0.00030040919,1.2368224e-7,0.002001571,0.000040979154,0.016469944,0.005278253,0.10493074,0.04685952],"study_design_scores_gemma":[0.0008993479,0.00084896147,0.65248275,0.000022645741,0.00008116008,0.000028245464,0.00021575016,0.0000034348598,0.002628638,0.00025341148,0.34230992,0.00022574859],"about_ca_topic_score_codex":0.008137053,"about_ca_topic_score_gemma":0.00038988117,"teacher_disagreement_score":0.2373792,"about_ca_system_score_codex":0.000040842067,"about_ca_system_score_gemma":0.000072084375,"threshold_uncertainty_score":0.99846786},"labels":[],"label_agreement":null},{"id":"W1054027755","doi":"10.1093/femspd/ftv057","title":"What to do about pertussis vaccines? Linking what we know about pertussis vaccine effectiveness, immunology and disease transmission to create a better vaccine: Graphical Abstract Figure.","year":2015,"lang":"en","type":"review","venue":"Pathogens and Disease","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; Public Health Ontario; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Bordetella pertussis; Whooping cough; Pertussis vaccine; Medicine; Immunization; Transmission (telecommunications); Immunology; Population; Immunity; Vaccine efficacy; Disease; Virology; Herd immunity; Vaccination; Biology; Immune system; Environmental health; Computer science; Bacteria","score_opus":0.016500503560987947,"score_gpt":0.288519291969749,"score_spread":0.2720187884087611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1054027755","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.051805075,0.94064736,0.00007497478,0.0022261075,0.002162118,0.0022665632,0.0006538125,0.00015446721,0.000009540714],"genre_scores_gemma":[0.006159357,0.9900995,0.00004290505,0.0005476349,0.00047085708,0.00091209897,0.0012341767,0.00017966043,0.00035380537],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.994694,0.0009369118,0.001191673,0.001960405,0.00010427923,0.0011127619],"domain_scores_gemma":[0.9958835,0.00056618516,0.00036083974,0.001080665,0.00032371387,0.0017850572],"candidate_categories":["metaepi_narrow"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0006661393,0.0015142312,0.0029401626,0.00091999554,0.0007464224,0.00088249194,0.0004541905,0.0010243971,0.0008342705],"category_scores_gemma":[0.00035356058,0.0010988225,0.0009139072,0.00062263047,0.00006965239,0.00089097524,0.0004512432,0.0008276821,0.00027366457],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001994738,0.0004955914,0.0015541201,0.0072453883,0.00077207375,0.00010797276,0.0002427966,0.0000015267408,0.0018666614,0.000045254135,0.0014960347,0.9841778],"study_design_scores_gemma":[0.00202854,0.00035931077,0.054150295,0.02971054,0.0032806871,0.00011516361,0.00009348657,0.0000023348102,0.000013150457,0.00025761218,0.9086109,0.0013780245],"about_ca_topic_score_codex":0.00005090261,"about_ca_topic_score_gemma":0.0000127987205,"teacher_disagreement_score":0.9827998,"about_ca_system_score_codex":0.00011846204,"about_ca_system_score_gemma":0.00047491965,"threshold_uncertainty_score":0.9997606},"labels":[],"label_agreement":null},{"id":"W113022672","doi":"10.1155/2007/289842","title":"Safety and Immunogenicity of a Fully Liquid Vaccine Containing Five‐Component Pertussis‐Diphtheria‐Tetanus‐Inactivated Poliomyelitis‐<i>Haemophilus influenzae</i> Type B Conjugate Vaccines Administered at Two, Four, Six and 18 Months of Age","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fraser Health; University of Calgary; Sanofi (Canada); Hospital for Sick Children","funders":"Sanofi Pasteur; Sanofi","keywords":"Medicine; Diphtheria; Tetanus; Vaccination; Poliomyelitis; Booster dose; Immunization; Hib vaccine; Poliovirus; Virology; Immunogenicity; Inactivated Poliovirus Vaccine; Poliomyelitis vaccine; Pediatrics; Conjugate vaccine; Immunology; Antibody; Virus","score_opus":0.01047598632881161,"score_gpt":0.24542748515491172,"score_spread":0.2349514988261001,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W113022672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838616,0.014360277,0.000019544936,0.00031361406,0.0008541458,0.00021475668,0.00027225004,0.000011867938,0.00009194661],"genre_scores_gemma":[0.99791783,0.0015859134,0.000010818376,0.00024917908,0.00011684081,0.0000017481277,0.000058231384,0.00002031506,0.000039130246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99794424,0.00025506725,0.0010324924,0.00025958166,0.000026671903,0.0004819482],"domain_scores_gemma":[0.99793905,0.00040967073,0.00062142534,0.00016615693,0.00038074292,0.0004829386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048165422,0.0002873828,0.0009575592,0.00037363177,0.0002911316,0.000014922676,0.00013986007,0.00035900247,0.00064679235],"category_scores_gemma":[0.00059643015,0.00023200607,0.00013764513,0.00018401677,0.0005019133,0.00009034659,0.0001042646,0.00031467844,0.0000015885163],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00962596,0.0001458831,0.09808297,0.00012801168,0.0011797309,0.00021176544,0.00043931173,0.0000024777307,0.88452274,0.00022087658,0.00028055414,0.0051597483],"study_design_scores_gemma":[0.035528347,0.017140307,0.7814164,0.0012634544,0.0014578522,0.039955303,0.0010013713,0.000006563873,0.03984955,0.00021831783,0.080982774,0.0011797315],"about_ca_topic_score_codex":0.011721161,"about_ca_topic_score_gemma":0.018706873,"teacher_disagreement_score":0.84467316,"about_ca_system_score_codex":0.00011136383,"about_ca_system_score_gemma":0.0004642586,"threshold_uncertainty_score":0.99919915},"labels":[],"label_agreement":null},{"id":"W1167437336","doi":"10.1128/9781555815639.ch33","title":"Evolution of<i>Bordetella pertussis</i>and<i>Bordetella parapertussis</i>as Deduced from Comparative Genome Analyses","year":2014,"lang":"en","type":"book-chapter","venue":"ASM Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Bordetella pertussis; Biology; Bordetella; Genome; Microbiology; Whooping cough; Host adaptation; Virulence; Genetics; Virology; Gene; Bacteria; Vaccination","score_opus":0.0570264764420044,"score_gpt":0.2951817498444287,"score_spread":0.2381552734024243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1167437336","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15976466,0.029305212,0.00030545925,0.000042275555,0.002141768,0.0011146294,0.0007853483,0.0002537224,0.80628693],"genre_scores_gemma":[0.7133279,0.0006614767,0.00006785532,0.000056459812,0.00027183758,0.00004714038,0.00040483248,0.00007563151,0.2850869],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977383,0.000209759,0.0008166945,0.00078557024,0.000056780893,0.00039288038],"domain_scores_gemma":[0.9978402,0.00043497665,0.0006698832,0.00073157944,0.00025126332,0.00007206143],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013061767,0.00070058345,0.0013922227,0.00024602117,0.00028773092,0.00004730218,0.00033432682,0.0010299975,0.00077688514],"category_scores_gemma":[0.000029353758,0.0005995304,0.00036283562,0.000017195156,0.00048737923,0.000050195842,0.00024087608,0.00056441565,0.00019660563],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005557703,0.00006055227,0.000034497796,0.00007727195,0.0025268793,0.0000027860551,0.0010197475,0.000010666407,0.944126,0.045197517,0.001194707,0.005193608],"study_design_scores_gemma":[0.0013723883,0.00041770012,0.0006027078,0.0002348926,0.0011501483,0.000048606405,0.000045081997,0.000009259993,0.098432936,0.003201408,0.8935999,0.00088497374],"about_ca_topic_score_codex":0.0031912844,"about_ca_topic_score_gemma":0.0002011589,"teacher_disagreement_score":0.8924052,"about_ca_system_score_codex":0.00006223889,"about_ca_system_score_gemma":0.00011618905,"threshold_uncertainty_score":0.9996456},"labels":[],"label_agreement":null},{"id":"W1182185477","doi":"10.1016/j.vaccine.2015.08.023","title":"Epidemiology of serogroup C and Y invasive meningococcal disease (IMD) in Ontario, 2000–2013: Vaccine program impact assessment","year":2015,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canada Research Chairs; Hospital for Sick Children; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Meningococcal disease; Meningococcal vaccine; Incidence (geometry); Epidemiology; Neisseria meningitidis; Population; Vaccination; Public health; Confidence interval; Pediatrics; Demography; Environmental health; Immunization; Internal medicine; Immunology; Biology; Antigen","score_opus":0.04024218922259488,"score_gpt":0.33021332418408844,"score_spread":0.28997113496149357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1182185477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546903,0.0024504897,0.000024435742,0.0007391275,0.00048817598,0.0006497116,0.000022443006,0.0000621166,0.000094454066],"genre_scores_gemma":[0.99844104,0.00011072847,0.00047295803,0.00005311477,0.000053718544,0.00007978822,0.00024905414,0.000018532222,0.00052104815],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981878,0.00034600132,0.00062718673,0.00037356056,0.000017518521,0.00044793228],"domain_scores_gemma":[0.9989058,0.00025868675,0.00023813134,0.00032182242,0.00013470459,0.00014089035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006586699,0.00026759712,0.0007111929,0.00022591275,0.000058392376,0.0000057142665,0.00013587651,0.00022331224,0.00085634197],"category_scores_gemma":[0.00024541275,0.00020293432,0.000101943355,0.00021059185,0.000022770988,0.00016455344,0.00015531943,0.00036185735,0.00003049505],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007714769,0.0005483224,0.9850313,0.000020869962,0.00015727436,0.000004436884,0.00023309697,0.00003536652,0.008190855,0.0002196876,0.0031566976,0.0016305809],"study_design_scores_gemma":[0.004514262,0.0011938369,0.98321366,0.00005124335,0.000070583024,0.000055158845,0.00007169993,0.000023455494,0.00047403265,0.0004598995,0.009672728,0.00019943947],"about_ca_topic_score_codex":0.065385304,"about_ca_topic_score_gemma":0.095269665,"teacher_disagreement_score":0.02988436,"about_ca_system_score_codex":0.00021986339,"about_ca_system_score_gemma":0.00046370237,"threshold_uncertainty_score":0.9408384},"labels":[],"label_agreement":null},{"id":"W1185677933","doi":"","title":"The Killing of Haemophilus Influenzae by Gatifloxacin, Levofloxacin, Ciprofloxacin, and Ofloxacin","year":2005,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Gatifloxacin; Ofloxacin; Ciprofloxacin; Levofloxacin; Haemophilus influenzae; Medicine; Microbiology; Antibiotics; Biology","score_opus":0.02770503822198435,"score_gpt":0.3118084388061463,"score_spread":0.28410340058416195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1185677933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934875,0.003353196,0.000006549285,0.0011492015,0.0007107336,0.0003489176,0.000034453456,0.00005440843,0.0008550398],"genre_scores_gemma":[0.9986086,0.00010848203,0.00020364864,0.00017966094,0.000080746824,0.00004508011,0.000013531478,0.000019539952,0.0007407143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974655,0.00032313337,0.0006796662,0.00068543106,0.00008922555,0.0007570585],"domain_scores_gemma":[0.99818903,0.0004811184,0.00039000745,0.00039552146,0.00041729276,0.00012704065],"candidate_categories":["sts"],"consensus_categories":["sts"],"category_scores_codex":[0.0012495916,0.00034225598,0.00045867704,0.0002112539,0.0014582919,0.000071133254,0.000572298,0.0002670205,0.00018478397],"category_scores_gemma":[0.00068920216,0.00024391786,0.00007692777,0.0008984975,0.008070734,0.0005408624,0.0003583761,0.0004484835,0.00011091128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055960365,0.000087156666,0.011244472,0.000009004167,0.000053009077,0.0000015818304,0.0005733504,0.000008128353,0.98327005,0.00072233815,0.000741972,0.0032329697],"study_design_scores_gemma":[0.00067908486,0.00053272024,0.019420052,0.000039484326,0.000032256783,0.00021130888,0.0003685489,0.000053149113,0.9657775,0.0015310156,0.011059783,0.00029509136],"about_ca_topic_score_codex":0.00028510552,"about_ca_topic_score_gemma":0.000020350355,"teacher_disagreement_score":0.017492553,"about_ca_system_score_codex":0.00007786198,"about_ca_system_score_gemma":0.00023687923,"threshold_uncertainty_score":0.9998417},"labels":[],"label_agreement":null},{"id":"W123815674","doi":"10.1093/pch/5.7.371","title":"New vaccines and the rising costs of caring","year":2000,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Measles; Poliomyelitis; Vaccination; Tetanus; Medicine; Immunization; Business; Intensive care medicine; Virology; Immunology; Antigen","score_opus":0.008409684609376135,"score_gpt":0.24716676686907352,"score_spread":0.23875708225969738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W123815674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95569724,0.03579326,0.0001027394,0.005046746,0.00077876187,0.000290642,0.000014787117,0.000045404107,0.0022304242],"genre_scores_gemma":[0.9885095,0.010444519,0.00008830365,0.00030639087,0.00028915182,0.0000026271753,0.000013914333,0.000009128916,0.00033646816],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9992395,0.00013268425,0.00027480006,0.0001357748,0.000011523018,0.00020573808],"domain_scores_gemma":[0.9995195,0.00015895547,0.00011255753,0.00015439787,0.000025461712,0.000029082777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032037924,0.000092531795,0.00024493536,0.00006256452,0.00032141697,0.000012277559,0.00007797446,0.000081340746,0.00035648455],"category_scores_gemma":[0.000035442506,0.0000615221,0.000049038917,0.00018028375,0.000031745538,0.000045793164,0.000030886546,0.00018907874,0.00002983879],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006849171,0.00013448944,0.10240447,0.00011300186,0.00019124534,3.5430887e-7,0.0030317681,0.00003262197,0.0011682734,0.0143110715,0.021322118,0.85660565],"study_design_scores_gemma":[0.020148473,0.0006175213,0.6707901,0.00021454069,0.00025552226,0.0003839667,0.00040073428,0.000027285947,0.0016697766,0.0020370665,0.302821,0.00063403556],"about_ca_topic_score_codex":0.00557442,"about_ca_topic_score_gemma":0.00022596969,"teacher_disagreement_score":0.85597163,"about_ca_system_score_codex":0.000020400103,"about_ca_system_score_gemma":0.00007149085,"threshold_uncertainty_score":0.8426893},"labels":[],"label_agreement":null},{"id":"W1238436908","doi":"","title":"Statement on adult/adolescent formulation of combined acellular pertussis, tetanus, and diphtheria vaccine.","year":2000,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Diphtheria; Tetanus; Medicine; Pertussis vaccine; Statement (logic); Virology; Immunization; Vaccination; Immunology; Antibody; Political science; Law","score_opus":0.009479575800079186,"score_gpt":0.22220533494592612,"score_spread":0.21272575914584693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1238436908","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965926,0.0013382189,0.000004165855,0.0008018483,0.0002126856,0.00027910687,0.00007450032,0.000026482208,0.0006704053],"genre_scores_gemma":[0.9969742,0.00048971846,0.0000119875385,0.00013039868,0.0000107282885,0.000021039552,0.0005138194,0.00001494681,0.001833191],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99896073,0.00012543898,0.00048140722,0.0001890475,0.000037504484,0.00020586383],"domain_scores_gemma":[0.9988434,0.000044309294,0.00017121453,0.0007550985,0.000110770685,0.00007522878],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013539694,0.0001590633,0.00027838288,0.00003615333,0.00022382756,0.0000124287435,0.0001330135,0.000061561135,0.0012701447],"category_scores_gemma":[0.00004701489,0.00013663592,0.00005292173,0.00007687192,0.000028674864,0.00006238597,0.00005688948,0.00013081288,0.000005219255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008983233,0.004364241,0.6136824,0.00075908704,0.0020821877,0.00032417497,0.00039141023,0.0006294736,0.21060012,0.004035548,0.10665698,0.04749114],"study_design_scores_gemma":[0.0031896268,0.0002623018,0.5296645,0.00024818105,0.00020583704,0.00008660403,0.00013392861,0.00012912977,0.010755228,0.00012298972,0.4547601,0.0004415697],"about_ca_topic_score_codex":0.11097992,"about_ca_topic_score_gemma":0.051211413,"teacher_disagreement_score":0.34810314,"about_ca_system_score_codex":0.000107049105,"about_ca_system_score_gemma":0.0003334926,"threshold_uncertainty_score":0.99964285},"labels":[],"label_agreement":null},{"id":"W1253352895","doi":"10.1016/j.cis.2015.08.013","title":"Bacterial membrane vesicles, an overlooked environmental colloid: Biology, environmental perspectives and applications","year":2015,"lang":"en","type":"review","venue":"Advances in Colloid and Interface Science","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":97,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Advanced Low Carbon Technology Research and Development Program; Japan Science and Technology Agency; Core Research for Evolutional Science and Technology; CapitalCare Foundation; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Nanotechnology; Vesicle; Biogenesis; Biology; Biochemical engineering; Chemistry; Membrane; Materials science; Genetics; Engineering; Gene","score_opus":0.014992127750025681,"score_gpt":0.3141951942663122,"score_spread":0.29920306651628653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1253352895","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037959095,0.95985234,0.000014400926,0.000006931561,0.0006437617,0.0008235341,0.0004361565,0.000027772305,0.00023600676],"genre_scores_gemma":[0.09204204,0.90717995,0.00007326645,0.000005051473,0.0001058424,0.00017304745,0.000114366514,0.000017968943,0.00028849544],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981188,0.0001658248,0.0004133963,0.0008906955,0.000033683784,0.0003775536],"domain_scores_gemma":[0.99929154,0.000084119056,0.00022039062,0.00031315305,0.000011607041,0.000079219244],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039359837,0.00037068783,0.0007984396,0.0002432114,0.00036285014,0.00007963098,0.00037641666,0.0002663602,0.00024874695],"category_scores_gemma":[0.000019795836,0.0003068937,0.000057764573,0.00021312182,0.0020834568,0.00081581145,0.0003388934,0.0003145687,0.00005428972],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005765208,0.00024695665,0.00012378609,0.00021401717,0.00004046367,2.130924e-7,0.00046003412,8.10831e-7,0.36035058,0.0005101205,0.000017082182,0.6379783],"study_design_scores_gemma":[0.0005543189,0.000367197,0.00005569943,0.0002134548,0.00006738754,0.00010724002,0.0011371996,0.0000012000139,0.0020745697,0.000082516715,0.99498314,0.0003560609],"about_ca_topic_score_codex":0.000030391333,"about_ca_topic_score_gemma":0.000034730918,"teacher_disagreement_score":0.9949661,"about_ca_system_score_codex":0.00023777477,"about_ca_system_score_gemma":0.00012884155,"threshold_uncertainty_score":0.9999383},"labels":[],"label_agreement":null},{"id":"W12786470","doi":"10.1093/pch/11.1.35","title":"Steroids in meningitis Part B: Clinical commentary","year":2006,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Stollery Children's Hospital; University of Alberta","funders":"","keywords":"Meningitis; Medicine; Intensive care medicine; Pediatrics","score_opus":0.019033899610049827,"score_gpt":0.29815203302029164,"score_spread":0.27911813341024183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W12786470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96689403,0.0076296194,0.000050406623,0.019005364,0.0044294274,0.00032071094,0.00010121303,0.00010156497,0.001467641],"genre_scores_gemma":[0.99129754,0.002584216,0.00011688482,0.0037517033,0.0014018014,0.000019914132,0.0005749895,0.000020202388,0.00023276308],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.998237,0.0003479239,0.0007207412,0.00026111206,0.0000160617,0.00041711886],"domain_scores_gemma":[0.99940383,0.00016449,0.00017328109,0.00020003061,0.000023625234,0.000034722263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072872196,0.00013442332,0.00033587412,0.00014612376,0.00023295316,0.0000141136115,0.00010691953,0.0001875564,0.00026695034],"category_scores_gemma":[0.000023902472,0.000126615,0.000090711845,0.00024038312,0.00004269912,0.00006584478,0.00006347014,0.00045447456,0.00017576187],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037712878,0.00044810938,0.64346796,0.000016585454,0.00001842772,0.0000013439218,0.000057753703,0.0000030081626,0.000074615506,0.00056243245,0.34631327,0.0089987945],"study_design_scores_gemma":[0.0018028385,0.00025452202,0.4166197,0.000014721272,0.00001044942,0.000023234697,0.000022797643,9.4819273e-7,0.00005368778,0.00018306215,0.5808815,0.00013257154],"about_ca_topic_score_codex":0.0032427532,"about_ca_topic_score_gemma":0.001400116,"teacher_disagreement_score":0.23456822,"about_ca_system_score_codex":0.00006852572,"about_ca_system_score_gemma":0.000056886416,"threshold_uncertainty_score":0.516321},"labels":[],"label_agreement":null},{"id":"W146283394","doi":"10.1093/pch/11.1.33","title":"In children with bacterial meningitis, does the addition of dexamethasone to an antibiotic treatment regimen result in a better clinical outcome than the antibiotic regimen alone?","year":2006,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Regimen; Medicine; Dexamethasone; Antibiotics; Meningitis; Internal medicine; Bacterial meningitis; Intensive care medicine; Pediatrics; Microbiology; Biology","score_opus":0.016630064375787706,"score_gpt":0.29472374221999653,"score_spread":0.2780936778442088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W146283394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881638,0.00044846104,0.000011026502,0.009134203,0.0006641934,0.0012475529,0.00023179421,0.000031308064,0.00006765658],"genre_scores_gemma":[0.9976401,0.0004604537,0.00019523011,0.00042008175,0.00071989413,0.00001596034,0.00045242556,0.000027170898,0.00006872001],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969585,0.0010105597,0.0009814671,0.00047829608,0.000050907714,0.0005202644],"domain_scores_gemma":[0.99856675,0.00032175911,0.00044890484,0.0005679972,0.00004707581,0.000047489124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012680289,0.00026508895,0.0006233919,0.00024933377,0.0002674875,0.000034001176,0.00025065045,0.00022659969,0.00004986814],"category_scores_gemma":[0.00006895687,0.00013309116,0.00010104996,0.0005629401,0.00013079341,0.00013142421,0.00006380018,0.00040832342,0.000023180753],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004485428,0.0008087695,0.99314994,0.000011789999,0.00008263809,0.0000014632019,0.00043638775,0.000014017959,0.0008240629,0.00020275258,0.0012422907,0.0027773704],"study_design_scores_gemma":[0.003519433,0.0015327118,0.99163765,0.000046967198,0.000061707644,0.000057576177,0.00008005129,0.0000014976602,0.0010207467,0.00005962247,0.0018062457,0.00017576409],"about_ca_topic_score_codex":0.015414643,"about_ca_topic_score_gemma":0.010383482,"teacher_disagreement_score":0.00947626,"about_ca_system_score_codex":0.00013304497,"about_ca_system_score_gemma":0.00012933927,"threshold_uncertainty_score":0.9911418},"labels":[],"label_agreement":null},{"id":"W146910708","doi":"","title":"Эпидемиология и профилактика менингококковой инфекции: критическая оценка политики вакцинации","year":2012,"lang":"ru","type":"article","venue":"Педиатрическая фармакология","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Vaccination; Medicine; Disease; Immunization; Incidence (geometry); Epidemiology; Environmental health; Neisseria meningitidis; Vaccination policy; Mass vaccination; Public health; Immunology; Biology; Antigen","score_opus":0.018691309248920932,"score_gpt":0.25830440280784295,"score_spread":0.23961309355892202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W146910708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8283125,0.055481482,0.0007150724,0.0033030289,0.049794964,0.002344249,0.001105023,0.0014007401,0.05754294],"genre_scores_gemma":[0.9356403,0.0031668744,0.00040538082,0.0012041603,0.006215574,0.00023905696,0.00087646546,0.00038992887,0.051862292],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9888153,0.0015185237,0.0025729032,0.0019288469,0.0002645475,0.004899863],"domain_scores_gemma":[0.9938165,0.00068025175,0.0012329186,0.002816973,0.0005899136,0.0008634574],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.0019341192,0.002258736,0.0024939908,0.0010320185,0.002038718,0.0004139077,0.0015796178,0.003044885,0.035080716],"category_scores_gemma":[0.00048899377,0.0022034852,0.0013898913,0.001607045,0.0009818531,0.0019321585,0.0011864649,0.0027823255,0.036779404],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001906479,0.00747537,0.10686583,0.0007694003,0.00457241,0.000050496306,0.004484719,0.000025995292,0.46943486,0.0267041,0.32616127,0.051549062],"study_design_scores_gemma":[0.0052945716,0.0008844131,0.08462583,0.00042410434,0.0011934594,0.0009424005,0.0011273832,0.000023765537,0.033994783,0.00044757884,0.86821216,0.0028295643],"about_ca_topic_score_codex":0.0014520091,"about_ca_topic_score_gemma":0.0003011873,"teacher_disagreement_score":0.5420509,"about_ca_system_score_codex":0.00052692444,"about_ca_system_score_gemma":0.0005346975,"threshold_uncertainty_score":0.9995183},"labels":[],"label_agreement":null},{"id":"W1475880960","doi":"10.1385/1-59259-148-5:255","title":"Determination of Antibody Responses to Meningococcal Antigens by ELISA","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute; BC Research (Canada)","funders":"","keywords":"Antigen; Antibody; Virology; Immunology; Medicine","score_opus":0.037304569893263244,"score_gpt":0.311746139723167,"score_spread":0.27444156982990375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1475880960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856649,0.0008131647,0.000760213,0.00000791399,0.00043481847,0.0002240416,0.00003779226,0.000045106823,0.012012047],"genre_scores_gemma":[0.9900971,0.000029816081,0.00014773883,0.000027143265,0.00001676139,0.000022014352,0.000025841386,0.000011433587,0.009622168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926615,0.00017374882,0.00020916236,0.00016601471,0.00001227974,0.00017265967],"domain_scores_gemma":[0.9995944,0.0000558186,0.0000741524,0.00019353909,0.00006568037,0.000016405535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014486614,0.000102705846,0.0001668011,0.00008188686,0.00012801672,0.000013906356,0.00008723986,0.0001101268,0.00018614419],"category_scores_gemma":[0.00006121768,0.00009515246,0.000045179906,0.000017267212,0.00005251097,0.00003542165,0.000031312175,0.000072607305,0.000023201319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007578973,0.000045306755,0.00022446616,0.000009517669,0.000028251323,3.7632154e-7,0.00033098372,1.7979728e-7,0.98668975,0.004160988,0.0020838447,0.006350557],"study_design_scores_gemma":[0.00035107086,0.00012301072,0.0015158211,0.000013951151,0.000018448936,0.000010542161,0.000019746565,4.5368267e-7,0.62827456,0.000038648675,0.36954194,0.000091781105],"about_ca_topic_score_codex":0.00017764446,"about_ca_topic_score_gemma":0.00001955958,"teacher_disagreement_score":0.3674581,"about_ca_system_score_codex":0.00000874195,"about_ca_system_score_gemma":0.000013900993,"threshold_uncertainty_score":0.3880205},"labels":[],"label_agreement":null},{"id":"W1479777070","doi":"10.1093/pch/12.10.873","title":"How long can we expect pertussis protection to last after the adolescent booster dose of tetanus-diphtheria-pertussis (Tdap) vaccines?","year":2007,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Tetanus; Diphtheria; Medicine; Whooping cough; Booster (rocketry); Booster dose; Pediatrics; Virology; Immunology; Immunization; Vaccination; Antigen","score_opus":0.015127447823031773,"score_gpt":0.24630044478009933,"score_spread":0.23117299695706756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1479777070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92704797,0.011080032,0.0018809596,0.05445331,0.0031736945,0.0019803904,0.00010617529,0.00013100586,0.00014647948],"genre_scores_gemma":[0.9957959,0.0011486509,0.000053983185,0.0014113055,0.00087323,0.000112173475,0.000028779821,0.000043754368,0.0005322283],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9979038,0.0002800827,0.0005931855,0.00044486095,0.000064316606,0.00071374816],"domain_scores_gemma":[0.99874854,0.000108510205,0.00034325372,0.0005233573,0.00015745348,0.000118913726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074899103,0.0003227323,0.00046910596,0.0003479883,0.0005081082,0.00005536916,0.0002310252,0.00026250945,0.00017492745],"category_scores_gemma":[0.00012131696,0.00021277835,0.00020410163,0.00069268164,0.000045826615,0.00010884938,0.00012337588,0.0005015786,0.00005189259],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062602446,0.0033563792,0.34784365,0.001300258,0.0007926265,0.00001528372,0.016427405,0.000019074021,0.049151745,0.00024229907,0.024032943,0.5505581],"study_design_scores_gemma":[0.0017843937,0.00084450754,0.852849,0.00015617459,0.00009477557,0.00016328247,0.000895646,0.0000013401491,0.0068898443,0.000021341833,0.13586412,0.00043557573],"about_ca_topic_score_codex":0.000729125,"about_ca_topic_score_gemma":0.00287057,"teacher_disagreement_score":0.5501225,"about_ca_system_score_codex":0.0001917369,"about_ca_system_score_gemma":0.00013299586,"threshold_uncertainty_score":0.8676849},"labels":[],"label_agreement":null},{"id":"W1486694971","doi":"10.1155/2000/219612","title":"Population‐Based Surveillance of HiB Invasive Infections in Children in British Columbia, Alberta and Ontario ‐‐ 1995 to 1997","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Health and Long Term Care; Alberta Health; University of Alberta; University of Calgary; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Geography; Population; Medicine; Environmental health; Pediatrics; Demography; Sociology","score_opus":0.0028864819299472115,"score_gpt":0.18809229645183775,"score_spread":0.18520581452189055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1486694971","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979471,0.0010540071,0.000001514671,0.0002515729,0.0003363699,0.00018033673,0.00017971954,0.0000036803508,0.00004570284],"genre_scores_gemma":[0.99914587,0.00019755345,0.0000036181439,0.00032879328,0.000037362275,0.0000070000215,0.00011838254,0.000008003617,0.00015340096],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886847,0.00017973824,0.0004804679,0.00017745557,0.000011438494,0.00028240742],"domain_scores_gemma":[0.9992981,0.00019119558,0.00011139584,0.000080978745,0.00006532739,0.00025299442],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016448855,0.000101688645,0.00042857192,0.00026751403,0.0001097958,0.000031007527,0.00008075649,0.0002451672,0.0034884226],"category_scores_gemma":[0.00037942978,0.00012789592,0.00006268935,0.00021511497,0.0001654578,0.00006153186,0.000014382429,0.00028112435,0.000005037999],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020449736,0.000106749634,0.9928491,0.000009775987,0.000053843673,0.000010836133,0.000074201766,0.000014432301,0.0005995514,0.000006218167,0.00078820024,0.005466657],"study_design_scores_gemma":[0.0019094791,0.00038829393,0.9881973,0.000150051,0.000021067399,0.0020898676,0.000013808726,3.6512444e-7,0.000010576785,0.00005776024,0.0070372866,0.00012408783],"about_ca_topic_score_codex":0.9568356,"about_ca_topic_score_gemma":0.9991261,"teacher_disagreement_score":0.04229048,"about_ca_system_score_codex":0.00016134772,"about_ca_system_score_gemma":0.000997974,"threshold_uncertainty_score":0.9974225},"labels":[],"label_agreement":null},{"id":"W1492136410","doi":"","title":"Neisseria meningitidis carriage by age: a systematic review","year":2008,"lang":"en","type":"review","venue":"Bristol Research (University of Bristol)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Carriage; Medicine; Microbiology; Virology; Biology; Bacteria; Genetics; Pathology","score_opus":0.07685020312909333,"score_gpt":0.3440208158180605,"score_spread":0.26717061268896714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1492136410","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006447526,0.99514574,0.000022536238,0.000058857597,0.00031148642,0.0024629342,0.0005042082,0.00008170421,0.001348045],"genre_scores_gemma":[0.000067468114,0.97835404,0.000022321077,0.000007231891,0.000026867727,0.000019627836,0.0010580445,0.000052407155,0.020391965],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.995246,0.0025155267,0.0007445729,0.00069304276,0.000115598465,0.00068526843],"domain_scores_gemma":[0.9971177,0.00050683436,0.0007650937,0.0010694043,0.00043153955,0.00010945625],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010349298,0.000468248,0.003960583,0.00057954947,0.0008564546,0.000029549565,0.0012727398,0.00070707384,0.0010035452],"category_scores_gemma":[0.00051310414,0.00047854212,0.0009927183,0.0011167527,0.0006750955,0.00018630037,0.0004951429,0.0011781172,0.0012568985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021318567,0.00017408597,7.0192294e-7,0.5992894,0.00085477787,0.00008823753,0.00011236148,8.696006e-9,0.00020788578,0.00006367216,0.3791936,0.019993909],"study_design_scores_gemma":[0.0002867888,0.00013257911,9.1946134e-7,0.17874444,0.0009470998,0.00055605284,0.00015577697,8.438164e-8,0.0000035566725,0.0000043161895,0.81884545,0.00032296235],"about_ca_topic_score_codex":0.0027832098,"about_ca_topic_score_gemma":0.00015918702,"teacher_disagreement_score":0.43965182,"about_ca_system_score_codex":0.0004098659,"about_ca_system_score_gemma":0.0005719102,"threshold_uncertainty_score":0.9999097},"labels":[],"label_agreement":null},{"id":"W1493966302","doi":"10.1186/s12866-015-0469-6","title":"Characterization of invasive Neisseria meningitidis strains from Québec, Canada, during a period of increased serogroup B disease, 2009-2013: phenotyping and genotyping with special emphasis on the non-carbohydrate protein vaccine targets","year":2015,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"European Commission; University of Oxford; Wellcome Trust","keywords":"Biology; Neisseria meningitidis; Multilocus sequence typing; Neisseria; Bacterial adhesin; Virology; Genotyping; Typing; Antigen; Microbiology; Gene; Genetics; Genotype; Virulence; Bacteria","score_opus":0.01027357589234581,"score_gpt":0.1872714165581141,"score_spread":0.1769978406657683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1493966302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974355,0.00036080915,0.000052243828,0.00042057643,0.0002801759,0.0006023722,0.00081505446,0.000016933558,0.000016326547],"genre_scores_gemma":[0.9988176,0.000014729014,0.000058219823,0.000041361593,0.00017826512,0.000046770052,0.0007508472,0.000023357094,0.00006882202],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987177,0.00025313452,0.000397825,0.0003302959,0.000017065722,0.00028396788],"domain_scores_gemma":[0.99900794,0.00007695554,0.0003841395,0.00026428493,0.00021205883,0.00005463721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001377059,0.0002511558,0.00044272092,0.00009530669,0.00018017116,0.000014199032,0.00015622027,0.00014455225,0.00026326944],"category_scores_gemma":[0.00011728605,0.00017990894,0.000047508212,0.0001440483,0.00011627339,0.00008052758,0.00008604789,0.00014364817,0.00000541232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014691926,0.00007649743,0.017256906,0.000041619653,0.00020858027,0.0000015513434,0.00054442935,0.000006837402,0.9801539,0.000048414146,0.00013679905,0.000055225337],"study_design_scores_gemma":[0.0027061105,0.0002889585,0.3432156,0.00019066932,0.00011461545,0.000024949559,0.00044774386,0.0000065755653,0.65116245,0.000015694217,0.0015317646,0.00029487335],"about_ca_topic_score_codex":0.25038096,"about_ca_topic_score_gemma":0.607407,"teacher_disagreement_score":0.357026,"about_ca_system_score_codex":0.00008077967,"about_ca_system_score_gemma":0.0008307419,"threshold_uncertainty_score":0.75461084},"labels":[],"label_agreement":null},{"id":"W1504286842","doi":"10.1128/jcm.38.2.941-942.2000","title":"Molecular Basis for Distinction of the ET-15 Clone within the ET-37 Complex of <b> <i>Neisseria meningitidis</i> </b>","year":2000,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; clone (Java method); Neisseriaceae; Biology; Microbiology; Virology; Genetics; Bacteria; Gene","score_opus":0.04799818259028567,"score_gpt":0.34102261352090735,"score_spread":0.2930244309306217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1504286842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7685769,0.0017169109,0.00043636438,0.21716596,0.010142499,0.00075281376,0.000943942,0.000017000355,0.00024760084],"genre_scores_gemma":[0.868139,0.0008046225,0.0005813112,0.12666588,0.002005801,0.000028922104,0.000664317,0.000107643405,0.0010024727],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9940398,0.0023940117,0.0029349283,0.00029879276,0.000022468475,0.000310036],"domain_scores_gemma":[0.992236,0.0026875352,0.0040293294,0.00052056846,0.0005065861,0.000019972013],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.002225967,0.00034434538,0.0016192304,0.0001025146,0.0001398318,0.000014482466,0.00074508064,0.00157244,0.00050039263],"category_scores_gemma":[0.00096911617,0.00018529179,0.0013801272,0.00016098622,0.00077821536,0.00005589852,0.00013934955,0.0025196734,0.000011269573],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009169847,0.00019902074,0.00034125542,0.00006724735,0.0009008041,0.000002277656,0.000053807365,0.000021405964,0.728402,0.00017515729,0.2684558,0.00046419547],"study_design_scores_gemma":[0.0023346439,0.0015262386,0.0026869106,0.00027327248,0.000787807,0.0012844212,0.00003453081,9.989301e-7,0.048122495,0.0005276986,0.94217956,0.00024142758],"about_ca_topic_score_codex":0.000056943947,"about_ca_topic_score_gemma":0.000033784454,"teacher_disagreement_score":0.68027955,"about_ca_system_score_codex":0.000023205142,"about_ca_system_score_gemma":0.00032974154,"threshold_uncertainty_score":0.99978155},"labels":[],"label_agreement":null},{"id":"W1505426466","doi":"10.1046/j.1432-1033.2002.03131.x","title":"Identification and localization of glycine in the inner core lipopolysaccharide of <i>Neisseria meningitidis</i>","year":2002,"lang":"en","type":"article","venue":"European Journal of Biochemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Neisseria meningitidis; Heptose; Lipopolysaccharide; Residue (chemistry); Glycine; Chemistry; Mass spectrometry; Neisseriaceae; Microbiology; Oligosaccharide; Biochemistry; Amino acid; Stereochemistry; Bacteria; Biology; Chromatography; Genetics; Antibiotics","score_opus":0.015673717056848432,"score_gpt":0.22305338595453922,"score_spread":0.20737966889769077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1505426466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99793106,0.0013991274,0.00012496464,0.000096944794,0.00013843353,0.000025624777,0.0000053836106,0.0000020723805,0.0002764146],"genre_scores_gemma":[0.999592,0.0002030694,0.000011810379,0.000013200836,0.000042222826,2.2173501e-7,0.0000061179558,0.000005094761,0.0001262274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993592,0.00009919849,0.0004177921,0.000056432353,0.0000132164805,0.000054162534],"domain_scores_gemma":[0.9993703,0.000027389655,0.00039726822,0.00010294306,0.00009492533,0.0000072159364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038771037,0.000055221528,0.00011967596,0.000046024037,0.000028314404,0.0000065150184,0.00010630949,0.000030143352,0.00012299066],"category_scores_gemma":[0.00007744744,0.000038694587,0.00003274097,0.00008953731,0.000067433684,0.000044517787,0.000017191462,0.000099127035,0.0000026042196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037669382,0.0000684713,0.0025848309,0.00002545449,0.000022163991,0.0000012817644,0.0003030907,0.0000056375984,0.99487185,0.000021121476,0.0010262403,0.0010322019],"study_design_scores_gemma":[0.00063239713,0.00010468509,0.005141592,0.000083464925,0.00002922686,0.00024827442,0.00031230488,0.000010041737,0.9920289,0.000010950475,0.001354788,0.000043371532],"about_ca_topic_score_codex":0.0000055131068,"about_ca_topic_score_gemma":6.8700547e-7,"teacher_disagreement_score":0.0028429332,"about_ca_system_score_codex":0.0000044920785,"about_ca_system_score_gemma":0.000005246571,"threshold_uncertainty_score":0.15779194},"labels":[],"label_agreement":null},{"id":"W1510942378","doi":"","title":"Brain Inflammatory Injury In S. Pneumoniae Pneumonia-Induced Sepsis","year":2013,"lang":"en","type":"article","venue":"Journal of undergraduate research in Alberta","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Pneumonia; Streptococcus pneumoniae; Immunology; Medicine; Sepsis; Intravital microscopy; Chemokine; Inflammation; Pathology; Biology; Internal medicine; Microbiology","score_opus":0.03505006861966184,"score_gpt":0.3326169583815893,"score_spread":0.29756688976192747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1510942378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89283895,0.00016857646,0.0000012533778,0.10548175,0.00062495505,0.00027745456,0.0000013680113,0.0000065723248,0.00059912086],"genre_scores_gemma":[0.99753046,0.00038221732,0.000013160339,0.00007622185,0.00009453633,0.00003068314,0.0000035347407,0.000025882304,0.0018433068],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9968098,0.0012020462,0.0009257654,0.00023500549,0.00010076548,0.0007266591],"domain_scores_gemma":[0.99780774,0.0011850632,0.0002504349,0.00029797913,0.0003738902,0.000084919186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018682996,0.00019342251,0.00046062772,0.0014143353,0.00013158239,0.0000886608,0.0004302703,0.00030788657,0.0001700025],"category_scores_gemma":[0.00072748685,0.00015883535,0.00013460415,0.0008477247,0.00012835088,0.00055963156,0.00016305062,0.0016238408,0.000641401],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012636383,0.0003172648,0.045120586,0.00003037424,0.000090095076,0.000019828985,0.00014615343,0.000008576695,0.93807167,0.0025330076,0.0069354097,0.006600682],"study_design_scores_gemma":[0.014860049,0.0054042563,0.45697248,0.002223122,0.00005209,0.0017964493,0.0010580457,0.00013368078,0.16563664,0.2039494,0.14611861,0.0017951815],"about_ca_topic_score_codex":0.00891829,"about_ca_topic_score_gemma":0.0038484293,"teacher_disagreement_score":0.772435,"about_ca_system_score_codex":0.0002564961,"about_ca_system_score_gemma":0.00031201282,"threshold_uncertainty_score":0.9976814},"labels":[],"label_agreement":null},{"id":"W1511738450","doi":"10.1155/2008/291726","title":"Intracerebral Abscess: A Complication of Severe Cystic Fibrosis Lung Disease","year":2008,"lang":"en","type":"article","venue":"Canadian Respiratory Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"","keywords":"Medicine; Cystic fibrosis; Complication; Pneumonectomy; Brain abscess; Abscess; Lung; Lung abscess; Surgery; Lung disease; Respiratory disease; Internal medicine","score_opus":0.017693905937231028,"score_gpt":0.23806781703830265,"score_spread":0.22037391110107163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1511738450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963488,0.0022370396,0.000078976256,0.00018263161,0.00059993163,0.00008792948,0.00010312287,0.000012854278,0.00034872637],"genre_scores_gemma":[0.99933845,0.000028432112,0.000024289373,0.00022199152,0.00013214005,0.0000056305175,0.000019023573,0.000010413417,0.00021960342],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992538,0.00011112726,0.00026953686,0.00011222523,0.000015286847,0.0002379897],"domain_scores_gemma":[0.99932665,0.00003198698,0.0001365123,0.00016396573,0.00014664064,0.00019424639],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010440541,0.000097499506,0.00015302814,0.00021701162,0.00046386314,0.000015702404,0.00013363153,0.00010252761,0.0016564679],"category_scores_gemma":[0.00006990995,0.000090686044,0.00007683549,0.00012486438,0.00010060095,0.00012491649,0.000011401372,0.00022720883,0.00008873711],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044823185,0.00016771432,0.4591003,0.00009805566,0.0003828611,0.00008804384,0.00055282307,0.0001690105,0.3845105,0.00231659,0.14415868,0.008007188],"study_design_scores_gemma":[0.0010646739,0.0000867643,0.77300316,0.00007127793,0.000058808022,0.001017487,0.000043527838,0.0000093238505,0.0017733463,0.00012653516,0.22252941,0.00021569988],"about_ca_topic_score_codex":0.0027295926,"about_ca_topic_score_gemma":0.004482151,"teacher_disagreement_score":0.38273716,"about_ca_system_score_codex":0.00012627029,"about_ca_system_score_gemma":0.00073588523,"threshold_uncertainty_score":0.99925613},"labels":[],"label_agreement":null},{"id":"W1519424328","doi":"10.17269/cjph.104.3755","title":"Challenges to the Surveillance of Meningococcal Disease in an Era of Declining Incidence in Montréal, Québec","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; Public Health Agency of Canada","funders":"","keywords":"Medicine; Incidence (geometry); Outbreak; Public health surveillance; Public health; Disease surveillance; Emergency medicine; Cumulative incidence; Medical emergency; Demography; Pediatrics; Cohort; Internal medicine; Pathology","score_opus":0.05286476191482497,"score_gpt":0.2931243455106241,"score_spread":0.24025958359579913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1519424328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9496126,0.010150539,0.000016596876,0.03980482,0.00025843194,0.00012843784,0.000010917158,0.0000014099255,0.000016237476],"genre_scores_gemma":[0.9992873,0.00040013416,0.000029408351,0.00022381819,0.000036515186,0.0000059516087,0.00000222346,0.000005116844,0.000009505024],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99858266,0.0004560641,0.0005572453,0.00008554456,0.000016298343,0.00030220702],"domain_scores_gemma":[0.9989392,0.00013695819,0.0002661653,0.00015547403,0.00020246176,0.00029973642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015360148,0.000066490335,0.00027377534,0.0002752663,0.000058577403,0.000012656192,0.00021021062,0.000054996464,0.00015127393],"category_scores_gemma":[0.0006402495,0.000048852373,0.00003304347,0.00020262878,0.000056039178,0.00018662382,0.000012600684,0.00026817623,0.0000053589265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022974207,0.00006043977,0.9138229,0.000024188541,0.00001801945,0.0000028654147,0.0049472284,0.00007364009,0.0009909432,0.00034228706,0.00092307833,0.07877142],"study_design_scores_gemma":[0.0003151092,0.00025888367,0.9870183,0.00007690258,9.3395096e-7,0.000015729078,0.0010306378,0.000007800395,0.000015737167,0.000028663808,0.0111877145,0.000043603945],"about_ca_topic_score_codex":0.72377217,"about_ca_topic_score_gemma":0.97847956,"teacher_disagreement_score":0.2547074,"about_ca_system_score_codex":0.00015686058,"about_ca_system_score_gemma":0.0040774764,"threshold_uncertainty_score":0.72332686},"labels":[],"label_agreement":null},{"id":"W1520048548","doi":"10.1371/journal.pone.0128993","title":"Clinical and Cost-Effectiveness of Procalcitonin Test for Prodromal Meningococcal Disease–A Meta-Analysis","year":2015,"lang":"en","type":"review","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre for Public Health, Queen's University Belfast; Medical Research Council; Queen's University; Queen's University Belfast; Atlantic Philanthropies","keywords":"Procalcitonin; Medicine; Internal medicine; Receiver operating characteristic; Gold standard (test); Emergency department; White blood cell; Meta-analysis; C-reactive protein; Pediatrics; Sepsis; Psychiatry","score_opus":0.379364325559445,"score_gpt":0.4152857314661484,"score_spread":0.035921405906703396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1520048548","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001493726,0.99285495,0.00004908309,0.000012866114,0.00011417913,0.0040836944,0.001318692,0.000041764757,0.00003106537],"genre_scores_gemma":[0.0019034661,0.989413,0.00031975703,0.0000046696046,0.0001432528,0.0051056393,0.0018860326,0.000059509883,0.0011646684],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99734616,0.00093227753,0.0008845704,0.0005642425,0.000030426168,0.00024230478],"domain_scores_gemma":[0.99673086,0.0019316185,0.00048926775,0.0004066362,0.00037104962,0.00007055468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014730431,0.00036284706,0.00539155,0.00022079739,0.00008369773,0.00001841009,0.00017627253,0.0005107259,0.00015017237],"category_scores_gemma":[0.0009890574,0.00024504686,0.0017682993,0.0003440172,0.0002047599,0.000054179192,0.00012020814,0.00030042656,0.000025180796],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051085895,0.008290003,0.0035186547,0.038744565,0.87597835,0.000001355048,0.000015042902,2.8284543e-7,0.0007644961,0.00031049747,0.0002644701,0.07160141],"study_design_scores_gemma":[0.000694804,0.0005260822,0.00042575554,0.00073722086,0.72287863,0.000003907604,0.0000013867157,0.0000016062198,0.00014546202,0.000038733404,0.27425444,0.0002919561],"about_ca_topic_score_codex":0.000015563737,"about_ca_topic_score_gemma":0.0000060639195,"teacher_disagreement_score":0.27398998,"about_ca_system_score_codex":0.000023585444,"about_ca_system_score_gemma":0.00022541486,"threshold_uncertainty_score":0.99927205},"labels":[],"label_agreement":null},{"id":"W1521664016","doi":"10.1111/1469-0691.12213","title":"Effects of amoxicillin treatment on the salivary microbiota in children with acute otitis media","year":2013,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Paediatric Society","funders":"Swiss Society for Microbiology","keywords":"Amoxicillin; Phylotype; Biology; Antibiotics; Actinobacteria; Microbiology; Otitis; Pyrosequencing; Fusobacterium; 16S ribosomal RNA; Bacteria; Bacteroides; Genetics","score_opus":0.011845485657858222,"score_gpt":0.2561986249347639,"score_spread":0.2443531392769057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521664016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99778664,0.0003241313,0.000011374328,0.00030957887,0.00073728745,0.00069770176,0.00002916174,0.0000311261,0.000073021794],"genre_scores_gemma":[0.9980274,0.0013598147,0.000015500476,0.00021143405,0.00006910466,0.00007711114,0.00011473427,0.00001148996,0.00011343714],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99853766,0.0004852177,0.0004262374,0.00031610602,0.000004092691,0.00023070014],"domain_scores_gemma":[0.998667,0.00090817455,0.00016431535,0.00019299086,0.000047384165,0.000020146295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018946039,0.00020332546,0.00040940274,0.00010134548,0.00011898746,0.000010209372,0.00007181002,0.0004426585,0.00031040626],"category_scores_gemma":[0.00008475236,0.000111790105,0.00009806631,0.00013527859,0.00046722894,0.00006574485,0.00004083193,0.00030975637,0.00021319326],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015385354,0.0005532042,0.30058014,0.0000060486113,0.0005021423,4.382234e-7,0.000048079917,6.7701325e-7,0.69203454,0.00026495333,0.0009936523,0.0048622796],"study_design_scores_gemma":[0.0022645835,0.00211467,0.86335534,0.000049235663,0.00011392076,0.00019740198,0.000005844195,3.6145525e-7,0.12966765,0.0000804093,0.0020127716,0.00013780234],"about_ca_topic_score_codex":0.00095548906,"about_ca_topic_score_gemma":0.00022155799,"teacher_disagreement_score":0.5627752,"about_ca_system_score_codex":0.000024709921,"about_ca_system_score_gemma":0.000026041842,"threshold_uncertainty_score":0.4558668},"labels":[],"label_agreement":null},{"id":"W1530776872","doi":"10.1186/1471-2431-6-20","title":"Frequency of apnea, bradycardia, and desaturations following first diphtheria-tetanus-pertussis-inactivated polio-Haemophilus influenzae type B immunization in hospitalized preterm infants","year":2006,"lang":"en","type":"article","venue":"BMC Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Stollery Children's Hospital; University of Alberta","funders":"","keywords":"Medicine; Pediatrics; Gestational age; Immunization; Apnea; Bradycardia; Anesthesia; Immunology; Internal medicine; Pregnancy; Antibody; Heart rate","score_opus":0.00967761872394623,"score_gpt":0.2323718596694529,"score_spread":0.22269424094550666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1530776872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953072,0.0029960668,0.00006479552,0.000038020666,0.00091077,0.0003084548,0.000042383075,0.00005884014,0.00027348532],"genre_scores_gemma":[0.9991077,0.0002293363,0.00022095509,0.000011329077,0.00010473266,0.000017228349,0.00020604405,0.000022730555,0.00007995245],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99889135,0.00012877349,0.0004731596,0.0002300217,0.000027061315,0.00024962297],"domain_scores_gemma":[0.9992863,0.00013259174,0.00020058289,0.00025130928,0.000110527464,0.000018672445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013695154,0.00018989034,0.0003318066,0.0002953198,0.00018002755,0.00003159734,0.000110035166,0.00029914328,0.000046292],"category_scores_gemma":[0.0002635708,0.00017741429,0.0000867333,0.0007485805,0.000050737817,0.000284274,0.00006136713,0.00015519671,0.000010732468],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074764954,0.0001132817,0.8863003,0.000042674812,0.000040536703,0.0000011271136,0.0002435424,0.000027934184,0.11265342,0.00017387678,0.00013553532,0.00019300211],"study_design_scores_gemma":[0.001877073,0.00010418592,0.9925492,0.000026184807,0.00010914215,0.000016787078,0.00004074044,0.000021946844,0.004157575,0.00031079637,0.0005285792,0.00025779818],"about_ca_topic_score_codex":0.0028230224,"about_ca_topic_score_gemma":0.00048766768,"teacher_disagreement_score":0.10849584,"about_ca_system_score_codex":0.000050364146,"about_ca_system_score_gemma":0.0000921028,"threshold_uncertainty_score":0.7234745},"labels":[],"label_agreement":null},{"id":"W1538258703","doi":"10.1007/bf03405229","title":"Enhanced Surveillance for Adverse Events Following Immunization","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; Yukon Health and Social Services; Public Health Agency of Canada","funders":"","keywords":"Tetanus; Medicine; Booster dose; Diphtheria; Immunization; Poliomyelitis; Adverse effect; Pediatrics; Booster (rocketry); Vaccination; Internal medicine; Immunology","score_opus":0.022589961184917136,"score_gpt":0.2700872173107191,"score_spread":0.24749725612580198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1538258703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97699535,0.0010916721,0.016003672,0.0023484041,0.0032039639,0.00014691926,0.000038398055,0.000008126754,0.00016347687],"genre_scores_gemma":[0.9988784,0.00001879394,0.0001671382,0.00013138511,0.00014954197,0.0000032547637,0.00008914008,0.000009537929,0.0005527843],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990055,0.00015737595,0.00037766635,0.00007035088,0.000010246216,0.00037884567],"domain_scores_gemma":[0.99926335,0.00005313731,0.00026357992,0.00008746199,0.0002085972,0.00012390695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009299236,0.00007055802,0.00019844557,0.00022511899,0.00030314486,0.0000115233115,0.00010623539,0.00008244135,0.00014339492],"category_scores_gemma":[0.00020919554,0.000065709275,0.00010420138,0.0001611284,0.000017358463,0.00016752214,0.0000035106186,0.00010620908,0.0000115205885],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012499014,0.0004140074,0.5105752,0.00019410037,0.0010873377,0.000010603272,0.002458632,0.00026373146,0.20371716,0.019270046,0.09848892,0.16339529],"study_design_scores_gemma":[0.0029304426,0.00044345172,0.33690265,0.000059963553,0.000011311844,0.000110028195,0.00037424377,0.0000051746433,0.001176687,0.0003283364,0.65745133,0.00020637822],"about_ca_topic_score_codex":0.014614639,"about_ca_topic_score_gemma":0.0627305,"teacher_disagreement_score":0.5589624,"about_ca_system_score_codex":0.0002231897,"about_ca_system_score_gemma":0.0021345452,"threshold_uncertainty_score":0.9919471},"labels":[],"label_agreement":null},{"id":"W1543799147","doi":"10.1093/pch/16.8.e61","title":"From genes to vaccine: A breakthrough in the prevention of meningococcal group B disease","year":2011,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; Novartis (Canada)","funders":"","keywords":"Meningococcal disease; Reverse vaccinology; Outbreak; Vaccination; Meningococcal vaccine; Disease; Medicine; Virology; Meningitis; Neisseria meningitidis; Antigen; Microbiology; Biology; Immunology; Immunization; Pediatrics; Bacteria; Genetics; Epitope; Pathology","score_opus":0.02036580460609432,"score_gpt":0.27278239677484056,"score_spread":0.25241659216874623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1543799147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99132115,0.0050398097,0.00040178653,0.0015817817,0.0007825927,0.00053127145,0.00009434042,0.0000286579,0.00021858697],"genre_scores_gemma":[0.99806464,0.0007784693,0.00024580656,0.00040304323,0.00027955175,0.000049980383,0.00014583276,0.000010295059,0.000022373237],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988341,0.00029394362,0.00038484653,0.00021638304,0.000020344285,0.00025039318],"domain_scores_gemma":[0.999427,0.00008189346,0.00015570456,0.00026335122,0.000030217,0.00004183108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003895743,0.000116479496,0.00022487159,0.00012189232,0.00013862233,0.000006380957,0.00018639817,0.00008646125,0.00024289177],"category_scores_gemma":[0.000044527944,0.00008459424,0.00007975734,0.00034106808,0.000012521458,0.00006759161,0.000060635397,0.00017541232,0.00005686219],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023139643,0.0048689577,0.8189819,0.0002571367,0.00024672592,0.000004813979,0.029294636,0.000010267798,0.010691322,0.011547095,0.023069166,0.09871404],"study_design_scores_gemma":[0.0011345524,0.00038959066,0.97860855,0.000032880496,0.00004030259,0.0000057498883,0.0002687502,9.696163e-7,0.00027049385,0.0012734098,0.017853336,0.00012143762],"about_ca_topic_score_codex":0.005620873,"about_ca_topic_score_gemma":0.00080641976,"teacher_disagreement_score":0.15962665,"about_ca_system_score_codex":0.000026225322,"about_ca_system_score_gemma":0.00006495658,"threshold_uncertainty_score":0.8497116},"labels":[],"label_agreement":null},{"id":"W1554800282","doi":"10.1186/s12974-015-0309-5","title":"CCAAT/enhancer-binding protein δ (C/EBPδ) aggravates inflammation and bacterial dissemination during pneumococcal meningitis","year":2015,"lang":"en","type":"article","venue":"Journal of Neuroinflammation","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw","keywords":"Ccaat-enhancer-binding proteins; Inflammation; Meningitis; Streptococcus pneumoniae; Immunology; Spleen; Medicine; Sepsis; Biology; Transcription factor; Internal medicine; Microbiology; DNA-binding protein; Antibiotics; Gene","score_opus":0.013778715050050775,"score_gpt":0.24825223237221553,"score_spread":0.23447351732216476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1554800282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981427,0.00007239627,0.000020074085,0.00031092353,0.0011148606,0.00022030728,0.000004343581,0.000033090284,0.00008129437],"genre_scores_gemma":[0.9990212,0.00003874418,0.00010766381,1.8823348e-8,0.00043720086,0.000008484541,0.00003373759,0.000015269687,0.00033770324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988963,0.0001620804,0.00059521606,0.00013036221,0.000049066446,0.00016695612],"domain_scores_gemma":[0.998821,0.000056623456,0.00068871304,0.00009049803,0.00029741257,0.0000457202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038962413,0.00014377813,0.00022984519,0.00025848803,0.00015518382,0.000099160025,0.00007930691,0.00013283189,0.000080542704],"category_scores_gemma":[0.00037002523,0.00012805442,0.000057361114,0.00013187995,0.000038371414,0.0008480387,0.00004041452,0.00020884238,0.000028236138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034672764,0.000020816942,0.000046962254,0.000026682736,0.00003207972,0.0000044918065,0.00044442847,0.000008885022,0.9950344,0.000083014136,0.00006610595,0.0038854016],"study_design_scores_gemma":[0.0012514183,0.00031256975,0.0018012406,0.00014760453,0.00003419566,0.00058973127,0.00012011597,0.000014395236,0.9945772,0.00013111436,0.0008986475,0.00012171565],"about_ca_topic_score_codex":0.0000076056685,"about_ca_topic_score_gemma":0.000008190645,"teacher_disagreement_score":0.003763686,"about_ca_system_score_codex":0.00006693271,"about_ca_system_score_gemma":0.000044539345,"threshold_uncertainty_score":0.5221908},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W1555447159","doi":"10.1155/2009/407139","title":"Anaerobic Brain Abscess following Chronic Suppurative Otitis Media in a Child from Uganda","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Children’s Hospital of Wisconsin Research Institute; Canadian Child Health Clinician Scientist Program; Women and Children's Health Research Institute; Child and Family Research Institute; Burroughs Wellcome Fund","keywords":"Brain abscess; Abscess; Medicine; Otitis; Chronic Suppurative Otitis Media; Anaerobic bacteria; Anaerobic infection; Surgery; Surgical excision; Anaerobic exercise; Biology; Bacteria; Physiology","score_opus":0.0037508356111328757,"score_gpt":0.21682696674146257,"score_spread":0.2130761311303297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1555447159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9769678,0.016636461,0.00003322305,0.003302033,0.0026044305,0.00010623846,0.00018604269,0.000013549978,0.00015022689],"genre_scores_gemma":[0.9982069,0.00041329535,0.000004606939,0.00083524955,0.00035536787,0.0000028272982,0.00014264992,0.000010135531,0.00002894092],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99857205,0.00022910802,0.0004973294,0.0002246566,0.000016668035,0.00046018828],"domain_scores_gemma":[0.99902016,0.0002573993,0.0001702146,0.0001099122,0.000071891714,0.00037044808],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016631624,0.00020358797,0.00053235784,0.00038255184,0.0002103567,0.000032004482,0.0001738986,0.00038832368,0.0018212603],"category_scores_gemma":[0.0006058281,0.00016798817,0.00017320718,0.00019590661,0.00023212416,0.0001270088,0.00001728731,0.0005291486,0.000020579004],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005294245,0.00094949943,0.37180895,0.00006679137,0.002039263,0.0033728497,0.0042618243,0.000023961544,0.40451524,0.0035561633,0.03863172,0.17024432],"study_design_scores_gemma":[0.015934309,0.002702363,0.8351051,0.0011765605,0.0003507543,0.010210867,0.0005836871,0.000003703146,0.0022594773,0.0023066835,0.12844343,0.0009230379],"about_ca_topic_score_codex":0.011781473,"about_ca_topic_score_gemma":0.13510782,"teacher_disagreement_score":0.46329618,"about_ca_system_score_codex":0.0001907038,"about_ca_system_score_gemma":0.0010135649,"threshold_uncertainty_score":0.9990912},"labels":[],"label_agreement":null},{"id":"W1558250787","doi":"10.1111/j.1750-2659.2011.00297.x","title":"Invasive bacterial infections following influenza: a time‐series analysis in Montréal, Canada, 1996–2008","year":2011,"lang":"en","type":"article","venue":"Influenza and Other Respiratory Viruses","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Institut National de Santé Publique du Québec; McGill University","funders":"","keywords":"Streptococcus pyogenes; Streptococcus pneumoniae; Haemophilus influenzae; Incidence (geometry); Neisseria meningitidis; Seasonal influenza; Medicine; Influenza-like illness; Microbiology; Biology; Immunology; Virology; Internal medicine; Staphylococcus aureus; Virus; Antibiotics; Coronavirus disease 2019 (COVID-19); Disease; Infectious disease (medical specialty); Bacteria","score_opus":0.05228144941408151,"score_gpt":0.27714097985882097,"score_spread":0.22485953044473944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1558250787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99559826,0.0026015665,0.000002857564,0.0000033232363,0.00051638077,0.00020046586,0.00009920309,0.000075206364,0.0009027206],"genre_scores_gemma":[0.9827815,0.000008597396,0.00003143704,0.016804827,0.00011902831,0.00012415719,0.0000040126583,0.000055149256,0.00007124818],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984876,0.00022854739,0.00053919916,0.00035412813,0.000029213339,0.00036134507],"domain_scores_gemma":[0.999315,0.000105625724,0.00016571766,0.000310623,0.000049733022,0.000053258616],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018727551,0.00028067606,0.0004884633,0.00043981755,0.00029444118,0.000043249853,0.00013178556,0.00024456836,0.0014937995],"category_scores_gemma":[0.00013132326,0.00025377204,0.00014745112,0.0005798154,0.00011776571,0.00034920842,0.00008044227,0.00020153115,0.00010607268],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026313827,0.00010777585,0.918111,0.000008048186,0.00090484635,0.000009669872,0.0005968045,0.0000092050295,0.07887333,0.00010182632,0.00086008915,0.0001542501],"study_design_scores_gemma":[0.001279168,0.00019367432,0.24651217,0.000026678303,0.0002764932,0.000009214478,0.00014069858,2.2345104e-7,0.015048818,0.00003962878,0.7361498,0.0003234596],"about_ca_topic_score_codex":0.57692933,"about_ca_topic_score_gemma":0.8696757,"teacher_disagreement_score":0.7352897,"about_ca_system_score_codex":0.00007018314,"about_ca_system_score_gemma":0.000262486,"threshold_uncertainty_score":0.9999915},"labels":[],"label_agreement":null},{"id":"W1565773612","doi":"10.1007/bf03403740","title":"Modifiable Risk Factors for Invasive Meningococcal Disease During an Edmonton, Alberta Outbreak, 1999–2002","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Alberta Health; University of Alberta","funders":"University of Alberta","keywords":"Medicine; Outbreak; Meningococcal disease; Logistic regression; Risk factor; Demography; Multivariate analysis; Incidence (geometry); Random digit dialing; Case-control study; Attendance; Odds ratio; Environmental health; Neisseria meningitidis; Internal medicine; Population; Biology","score_opus":0.0481012704862128,"score_gpt":0.2618681267135697,"score_spread":0.2137668562273569,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1565773612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99526066,0.0011349707,0.00016246873,0.0016423946,0.0011863556,0.00024405026,0.000263565,0.000010897965,0.00009462049],"genre_scores_gemma":[0.9977606,0.00019602485,0.00005639705,0.00012856124,0.0002509806,0.000010225893,0.00008401162,0.00002361176,0.0014895995],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981779,0.00029274035,0.0005285178,0.00018625996,0.000020768448,0.0007938139],"domain_scores_gemma":[0.99759233,0.00017494438,0.00042592795,0.00021255092,0.0002736329,0.0013206026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049606874,0.00017319183,0.0003714449,0.0004058621,0.0011340394,0.00005230815,0.00022812012,0.00013830948,0.0006861621],"category_scores_gemma":[0.000977904,0.00014889488,0.0001476135,0.00015873116,0.00010852077,0.0004887415,0.0000116104375,0.00031464986,0.000020658603],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029469474,0.0005307718,0.89268154,0.00017701845,0.0009570225,0.0000661074,0.016461112,0.00040257367,0.008784682,0.0019238816,0.07345496,0.00426562],"study_design_scores_gemma":[0.0033943679,0.001062431,0.62089944,0.00006509386,0.000056824916,0.000830798,0.0014608066,0.000023963092,0.0007076255,0.00011137973,0.37095812,0.00042917256],"about_ca_topic_score_codex":0.27760497,"about_ca_topic_score_gemma":0.18311985,"teacher_disagreement_score":0.29750317,"about_ca_system_score_codex":0.00036191734,"about_ca_system_score_gemma":0.0057551228,"threshold_uncertainty_score":0.9998813},"labels":[],"label_agreement":null},{"id":"W1567676070","doi":"10.1007/bf03404299","title":"Comparing Benefits and Risks of Immunization","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control","funders":"British Columbia Centre for Disease Control; BC Children's Hospital","keywords":"Medicine; Immunization; Measles; Incidence (geometry); Rubella; Disease; Poliomyelitis; Environmental health; Pediatrics; Adverse effect; Vaccination; Immunology; Internal medicine","score_opus":0.13990163213831885,"score_gpt":0.3146068713337393,"score_spread":0.17470523919542047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1567676070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901409,0.0067855027,0.00017164426,0.002074395,0.0005481975,0.000035890163,0.000006162234,0.000002542098,0.00023476791],"genre_scores_gemma":[0.9990365,0.0007523761,0.000032625765,0.000079490856,0.00004031063,2.5027282e-7,0.000009501961,0.0000041934145,0.00004476983],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993247,0.00011655284,0.00029960237,0.00004233194,0.0000070098054,0.00020981232],"domain_scores_gemma":[0.9993376,0.000026062715,0.00023310285,0.00006536246,0.0001769304,0.00016093646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005850758,0.000046410398,0.00018330642,0.0002650678,0.00015306543,0.00001808488,0.00006826491,0.000060185826,0.00020861733],"category_scores_gemma":[0.00011132799,0.000041761654,0.000023110144,0.00014731528,0.00004739614,0.0001225677,0.0000061929063,0.00013082553,0.0000033463994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007690277,0.00002587364,0.884962,0.00001528258,0.00007699402,0.0000011359559,0.0007661555,0.000016290625,0.0021590863,0.0048220875,0.001504203,0.105643205],"study_design_scores_gemma":[0.00067566574,0.00023201201,0.83295166,0.00005369771,0.0000069369094,0.0006490881,0.00038860817,0.0000040528244,0.00017937277,0.00004053599,0.16476071,0.000057627913],"about_ca_topic_score_codex":0.02968331,"about_ca_topic_score_gemma":0.04172682,"teacher_disagreement_score":0.16325651,"about_ca_system_score_codex":0.00006382744,"about_ca_system_score_gemma":0.00094482134,"threshold_uncertainty_score":0.9767781},"labels":[],"label_agreement":null},{"id":"W1568143797","doi":"10.1007/bf03405228","title":"Pertussis in Rural Populations of Saskatchewan (1995 to 2003)","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Health Canada; Western University; University of Saskatchewan","funders":"","keywords":"Incidence (geometry); Epidemiology; Medicine; Rural area; Vaccination; Demography; Pertussis vaccine; Population; Cumulative incidence; Rural population; Pediatrics; Environmental health; Immunology; Immunization; Internal medicine; Cohort","score_opus":0.03585011296875594,"score_gpt":0.278099831052861,"score_spread":0.24224971808410506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1568143797","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858439,0.00090886763,0.00019297288,0.011471763,0.0012445878,0.00008900796,0.000051655534,0.0000031959105,0.00019404801],"genre_scores_gemma":[0.99868757,0.000007097666,0.00022402941,0.0002790305,0.00009337091,0.0000015720165,0.00002813852,0.0000065323716,0.00067264185],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988562,0.00016372488,0.0005287596,0.000057899055,0.000012543264,0.00038090546],"domain_scores_gemma":[0.9992134,0.00001651658,0.0001952023,0.00009559844,0.00025432388,0.00022498093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000581835,0.000069539536,0.00024379477,0.0006469539,0.000113636204,0.000017901575,0.000108016204,0.000086876666,0.0005555709],"category_scores_gemma":[0.00016610861,0.0000618412,0.00004408475,0.00057346927,0.00003473828,0.00011784705,0.000005274347,0.0001659005,0.000016877408],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001765304,0.00015861647,0.82277626,0.000025999085,0.000057866004,0.0000059774598,0.0036171826,0.000050872062,0.010542066,0.0056445347,0.1054378,0.05166517],"study_design_scores_gemma":[0.00055096817,0.00022867566,0.7986456,0.00004467762,0.000004177072,0.00014275803,0.0022771636,9.61834e-7,0.00013187842,0.0001260007,0.19776475,0.000082343286],"about_ca_topic_score_codex":0.3827046,"about_ca_topic_score_gemma":0.76562744,"teacher_disagreement_score":0.3829229,"about_ca_system_score_codex":0.00027338558,"about_ca_system_score_gemma":0.0040800734,"threshold_uncertainty_score":0.7237875},"labels":[],"label_agreement":null},{"id":"W1572579110","doi":"10.1016/j.vaccine.2005.01.056","title":"Outer membrane protein (OMP) based vaccine for serogroup B","year":2005,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"Centers for Disease Control and Prevention","keywords":"Polyclonal antibodies; Neisseria meningitidis; Bacterial outer membrane; Neisseriaceae; Biology; Western blot; Microbiology; Antibody; Virology; Molecular biology; Recombinant DNA; Bacteria; Gene; Immunology; Genetics; Escherichia coli","score_opus":0.013081073798165302,"score_gpt":0.24449118348618498,"score_spread":0.23141010968801967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1572579110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98699725,0.0006154476,0.0022650321,0.007365938,0.00093146256,0.00113083,0.000075858065,0.00028775958,0.0003304017],"genre_scores_gemma":[0.9894444,0.000011500199,0.0018855244,0.0004733325,0.0005604462,0.00018027387,0.0003056445,0.000041053012,0.0070978384],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988146,0.00006024279,0.00036566166,0.0003367155,0.000013452658,0.00040932695],"domain_scores_gemma":[0.9993036,0.000070325405,0.0001082638,0.00036150022,0.00012293465,0.00003341059],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002052299,0.00023950839,0.00034685654,0.00014754206,0.00020336683,0.000025347848,0.00017114304,0.00023325389,0.00403684],"category_scores_gemma":[0.000047885067,0.00019349372,0.00014850721,0.00016187404,0.0000046481678,0.00015606318,0.00004212822,0.00016045682,0.00066253875],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067647424,0.0003017566,0.0008025838,0.00004261306,0.000117290576,5.452135e-7,0.000026283333,0.000025513924,0.9696511,0.0006005558,0.016540606,0.011214701],"study_design_scores_gemma":[0.0050733266,0.0003053624,0.0024690756,0.000023396846,0.00004619531,0.000023487411,0.000007369841,0.00007733677,0.39026186,0.000029826022,0.6014812,0.00020155564],"about_ca_topic_score_codex":0.00006046833,"about_ca_topic_score_gemma":0.0001759477,"teacher_disagreement_score":0.5849406,"about_ca_system_score_codex":0.00003328889,"about_ca_system_score_gemma":0.000028940918,"threshold_uncertainty_score":0.9968736},"labels":[],"label_agreement":null},{"id":"W1574384106","doi":"10.1111/j.1365-2958.2010.07098.x","title":"The moonlighting protein fructose-1, 6-bisphosphate aldolase of Neisseria meningitidis: surface localization and role in host cell adhesion","year":2010,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Johns Hopkins University","keywords":"Biology; Aldolase A; Neisseria meningitidis; Complementation; Cytoplasm; Bacterial outer membrane; Cell biology; Fructose-bisphosphate aldolase; Microbiology; Biochemistry; Bacteria; Mutant; Enzyme; Escherichia coli; Genetics; Gene","score_opus":0.002687707916377754,"score_gpt":0.1935236092887153,"score_spread":0.19083590137233752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1574384106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964435,0.002406161,0.000104967614,0.00012211822,0.00043284646,0.00034580263,0.000020493797,0.000026354086,0.00009775306],"genre_scores_gemma":[0.99945456,0.00005855214,0.00016500513,0.000026445716,0.000009463418,0.000014785219,0.00008008331,0.000018629333,0.00017245398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988465,0.00021964336,0.000348776,0.00027791626,0.0000057851407,0.00030139447],"domain_scores_gemma":[0.9994213,0.00006565338,0.0001758926,0.0002469182,0.00007312086,0.000017100338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025828028,0.00017092822,0.00024356999,0.000058397578,0.00019317797,0.00001937725,0.00014662681,0.00031933328,0.0000739265],"category_scores_gemma":[0.00006391671,0.00012958368,0.000048564933,0.00014881507,0.00018310806,0.000052378684,0.00011132722,0.00028230567,0.00002337664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094891235,0.000059152433,0.002920037,0.000014405345,0.00002215773,0.0000011563972,0.0001254427,0.000010682164,0.99589336,0.0005454693,0.000032168908,0.0002810592],"study_design_scores_gemma":[0.0007791612,0.00012883835,0.001332252,0.000022701268,0.000014059211,0.000052471627,0.00010819435,0.000015042218,0.98251384,0.00009302435,0.014802345,0.00013808791],"about_ca_topic_score_codex":0.0003723577,"about_ca_topic_score_gemma":0.00026227377,"teacher_disagreement_score":0.014770175,"about_ca_system_score_codex":0.000010065764,"about_ca_system_score_gemma":0.000026227279,"threshold_uncertainty_score":0.52842695},"labels":[],"label_agreement":null},{"id":"W1582692161","doi":"","title":"Conjugated vaccines against serogroup A, C, W-135 and y disease","year":2009,"lang":"en","type":"article","venue":"Vaccimonitor/VacciMonitor","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Diphtheria; Medicine; Meningococcal vaccine; Diphtheria toxin; Virology; Conjugate vaccine; Incidence (geometry); Immunization; Neisseria meningitidis; Vaccination; Immunology; Microbiology; Antigen; Biology; Toxin","score_opus":0.009968405839818216,"score_gpt":0.2423788965361435,"score_spread":0.23241049069632527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1582692161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98248,0.007783041,0.000026619678,0.0021418047,0.005140565,0.00073228497,0.00012113017,0.00071828085,0.00085630344],"genre_scores_gemma":[0.99464756,0.001164614,0.000102812664,0.00050076895,0.0012862594,0.00008576847,0.00029391807,0.000075505865,0.0018427852],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99684954,0.00028526923,0.0008161306,0.0009612697,0.00006818815,0.0010196046],"domain_scores_gemma":[0.99798167,0.00019404596,0.00030319812,0.0008480303,0.00030163047,0.0003714165],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002603384,0.00075851585,0.00077830174,0.00038791768,0.00085572683,0.00025586542,0.0004776109,0.0005476114,0.00067809667],"category_scores_gemma":[0.00024764196,0.00068086333,0.00025906897,0.00052446517,0.000070149916,0.0006290974,0.00017768668,0.0005940158,0.0007981641],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016776653,0.0011587719,0.19482107,0.00007934969,0.00053214445,0.00004590598,0.00024619073,0.000008164806,0.6669277,0.0010144238,0.04045865,0.09302998],"study_design_scores_gemma":[0.0060243206,0.00080877356,0.7552846,0.00016857055,0.0003366878,0.00008940369,0.0003279041,0.000025767744,0.035586394,0.00081674487,0.19902553,0.0015053065],"about_ca_topic_score_codex":0.00015636176,"about_ca_topic_score_gemma":0.000021461954,"teacher_disagreement_score":0.6313413,"about_ca_system_score_codex":0.000088589375,"about_ca_system_score_gemma":0.00013706778,"threshold_uncertainty_score":0.99997985},"labels":[],"label_agreement":null},{"id":"W1595610419","doi":"10.1002/pbc.21174","title":"Immune response to conjugated meningococcal C vaccine in pediatric oncology patients","year":2007,"lang":"en","type":"article","venue":"Pediatric Blood & Cancer","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Serology; Meningococcal vaccine; Internal medicine; Titer; Vaccination; Meningococcal disease; Chemotherapy; Immunology; Cohort; Immune system; Oncology; Antibody; Neisseria meningitidis","score_opus":0.009039089523671068,"score_gpt":0.2742071069725253,"score_spread":0.26516801744885427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1595610419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922505,0.0034646334,0.000013450549,0.0004038208,0.0029404294,0.0005214691,0.000047828995,0.000099983125,0.0002578968],"genre_scores_gemma":[0.9972917,0.00095378095,0.000057540907,0.00018184389,0.0007456742,0.000113836475,0.000050915747,0.000032454078,0.00057226856],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99782115,0.00025629846,0.0007379814,0.00044108927,0.00003385884,0.000709626],"domain_scores_gemma":[0.99884814,0.00039358277,0.00021170135,0.00026570095,0.00019919504,0.00008168946],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009305467,0.00026385084,0.00046957878,0.0007207435,0.0001466448,0.000014165168,0.00022045034,0.00041663725,0.0011008898],"category_scores_gemma":[0.00026521485,0.00024654754,0.00008977234,0.0012085845,0.000016807824,0.00010074603,0.00014163977,0.0004277951,0.00038029972],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005427615,0.001055379,0.88746274,0.000029191055,0.000076912715,0.000010589876,0.00044142478,0.000012324023,0.0981001,0.000018349634,0.0038292797,0.0035361128],"study_design_scores_gemma":[0.0075757126,0.0010088097,0.9402089,0.0000066966827,0.00025892528,0.000013969851,0.000028749102,2.747251e-7,0.0069172075,0.0000075980715,0.043660466,0.00031266263],"about_ca_topic_score_codex":0.0011802646,"about_ca_topic_score_gemma":0.0007393604,"teacher_disagreement_score":0.091182895,"about_ca_system_score_codex":0.00014477277,"about_ca_system_score_gemma":0.00021560662,"threshold_uncertainty_score":0.9999987},"labels":[],"label_agreement":null},{"id":"W1600684112","doi":"10.1016/j.vaccine.2015.08.066","title":"The impact of parental postpartum pertussis vaccination on infection in infants: A population-based study of cocooning in Western Australia","year":2015,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Medicine and Dentistry, University of Alberta; Faculty of Medicine, Dentistry and Health Sciences, University of Western Australia; Department of Health, Government of Western Australia","keywords":"Medicine; Vaccination; Pediatrics; Hazard ratio; Incidence (geometry); Pertussis vaccine; Population; Obstetrics; Cohort study; Confidence interval; Immunization; Immunology; Internal medicine; Environmental health; Immune system","score_opus":0.03301799810689455,"score_gpt":0.330721293729521,"score_spread":0.2977032956226265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1600684112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991439,0.00004051753,0.0000020358182,0.000043365755,0.0003549847,0.00038070683,0.000009842882,0.000012485536,0.00001216514],"genre_scores_gemma":[0.9998353,0.000007099348,0.000001240563,0.0000024408566,0.000017590113,0.000019639769,0.0000694818,0.000007642391,0.000039566505],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990146,0.00022775675,0.00044518017,0.00013799801,0.000023174385,0.00015129849],"domain_scores_gemma":[0.99937916,0.00012449571,0.0002127458,0.00017687584,0.00009311713,0.000013583889],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003094725,0.000120596116,0.00024898016,0.00030034338,0.000050960465,0.000009438363,0.00006752704,0.00009808187,0.00007835434],"category_scores_gemma":[0.00014877168,0.00008037861,0.000051189618,0.00036269057,0.0000028799068,0.00010451127,0.000021947091,0.00013953981,0.000008377678],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008483438,0.0008710213,0.98948133,0.0000056531258,0.000040432114,3.7530293e-7,0.00039190415,0.0017806756,0.005957537,0.000009296279,0.000066001674,0.00054744113],"study_design_scores_gemma":[0.004481161,0.0018239708,0.99143887,0.000049430535,0.000013044047,0.0000032624569,0.00017642335,0.00007284176,0.0018262945,0.000014492014,0.000024791412,0.000075412994],"about_ca_topic_score_codex":0.038695075,"about_ca_topic_score_gemma":0.019954117,"teacher_disagreement_score":0.018740958,"about_ca_system_score_codex":0.00012376037,"about_ca_system_score_gemma":0.000036146477,"threshold_uncertainty_score":0.99792916},"labels":[],"label_agreement":null},{"id":"W163305355","doi":"10.1016/j.vaccine.2008.04.064","title":"WHO Working Group meeting on standardization of acellular pertussis vaccines: Potency assay","year":2008,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Potency; Context (archaeology); Medicine; Standardization; Pertussis vaccine; Immunology; Immunization; Biology; In vitro; Antigen; Computer science","score_opus":0.015776148450001058,"score_gpt":0.22479066419121124,"score_spread":0.2090145157412102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W163305355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910236,0.0018835402,0.0031952625,0.0003032464,0.0010412115,0.0002008263,0.000015763084,0.000114866096,0.0022216765],"genre_scores_gemma":[0.9972723,0.0006995795,0.00016608808,0.000047882557,0.00015985299,0.0000067240235,0.000097126074,0.000026919482,0.0015235405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988161,0.00017727407,0.00043010616,0.0002798392,0.00003057591,0.00026612045],"domain_scores_gemma":[0.99919677,0.00013596291,0.00021286967,0.00030311858,0.00012979042,0.00002147797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031679336,0.0001987632,0.00038955203,0.00020607165,0.00033251548,0.000009226608,0.00013484115,0.00021205013,0.00086530746],"category_scores_gemma":[0.0001671697,0.00016051291,0.00011750575,0.0003502786,0.000011061644,0.000096194555,0.00005617232,0.00018306343,0.00006959711],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044013557,0.00027336582,0.06316519,0.00003083853,0.00021016695,0.000004427235,0.00039486712,0.00017254244,0.9169491,0.0009227728,0.005446241,0.011990353],"study_design_scores_gemma":[0.007085393,0.0014418388,0.13760592,0.0007009069,0.00020220649,0.0002619891,0.00032046923,0.00009613923,0.496278,0.00018692149,0.35499468,0.0008255516],"about_ca_topic_score_codex":0.00018664102,"about_ca_topic_score_gemma":0.000035083944,"teacher_disagreement_score":0.4206711,"about_ca_system_score_codex":0.000036889374,"about_ca_system_score_gemma":0.000025763473,"threshold_uncertainty_score":0.947451},"labels":[],"label_agreement":null},{"id":"W165444948","doi":"10.1007/978-1-60761-454-8_6","title":"Profiling LPS Glycoforms of Non-typeable Haemophilus influenzae by Multiple-Stage Tandem Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Haemophilus influenzae; Tandem mass spectrometry; Haemophilus; Chemistry; Mass spectrometry; Microbiology; Computational biology; Biology; Chromatography; Bacteria; Genetics; Antibiotics","score_opus":0.017612639457354303,"score_gpt":0.3458766888983598,"score_spread":0.3282640494410055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W165444948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56768215,0.0014624387,0.42909193,0.0000748783,0.0005098393,0.0002776003,0.000031523057,0.000040779832,0.0008288723],"genre_scores_gemma":[0.5789307,0.0000997977,0.4200872,0.0002506185,0.00003570252,0.00002383858,0.00014989822,0.000024351264,0.00039793953],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979156,0.00061954034,0.00055488455,0.00040293921,0.000014115952,0.0004928945],"domain_scores_gemma":[0.9991216,0.00019247235,0.0002101724,0.00038275303,0.00006731189,0.000025656169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091341976,0.00024541904,0.0005910558,0.00030871716,0.00007801521,0.0000085111615,0.00025898698,0.0005707435,0.00019078162],"category_scores_gemma":[0.00041469044,0.00020899337,0.00013491386,0.00045579468,0.00013445904,0.00005408293,0.00006922068,0.00039785713,0.000020554988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010885254,0.00012047347,0.015700486,0.000012157505,0.00007528169,0.0000032423914,0.00002877597,0.000023957198,0.97804624,0.0011653027,0.00005092424,0.004664321],"study_design_scores_gemma":[0.0014898083,0.00058851147,0.0031027545,0.000016625227,0.000021318117,0.000023176375,0.000044950495,0.0000466682,0.9862633,0.0022265231,0.005945166,0.00023119959],"about_ca_topic_score_codex":0.00014733706,"about_ca_topic_score_gemma":0.0000085549045,"teacher_disagreement_score":0.012597732,"about_ca_system_score_codex":0.00004914608,"about_ca_system_score_gemma":0.000041150543,"threshold_uncertainty_score":0.8522502},"labels":[],"label_agreement":null},{"id":"W1654696136","doi":"10.1186/1471-2334-5-57","title":"Hospitalization for pertussis: profiles and case costs by age","year":2005,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Centers for Disease Control and Prevention","keywords":"Medicine; Demographics; Case fatality rate; Pediatrics; Health care; Emergency medicine; Demography; Epidemiology; Internal medicine","score_opus":0.008428451581520557,"score_gpt":0.24456118515707845,"score_spread":0.2361327335755579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1654696136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942995,0.0032157362,0.00081681064,0.000056202793,0.000412488,0.00047467934,0.0003436218,0.0001889726,0.00019201732],"genre_scores_gemma":[0.9984033,0.00010624553,0.00003498874,0.000075640055,0.00013632968,0.00024199898,0.0003907569,0.000017332652,0.0005934027],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994063,0.00005525067,0.00014927825,0.0002046579,0.0000070561755,0.00017747965],"domain_scores_gemma":[0.9996501,0.00009488847,0.000059709535,0.00011132228,0.000052717027,0.000031248866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000037880433,0.00013156292,0.00014567732,0.000058913633,0.00032822395,0.000047786434,0.00002881221,0.0001085986,0.00017958894],"category_scores_gemma":[0.00010055606,0.000113903174,0.0000630469,0.000060872197,0.00006049054,0.00015152099,0.000023217792,0.000039798884,0.000030639956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050022424,0.0024699073,0.6178222,0.000361829,0.00054355874,0.000021908663,0.000494557,0.000030176903,0.14294109,0.0073368726,0.15562811,0.07184958],"study_design_scores_gemma":[0.016639322,0.0022966359,0.13093951,0.00015843254,0.0012583091,0.0054386156,0.00071121776,0.00021094638,0.043612294,0.00079867017,0.7959584,0.0019776565],"about_ca_topic_score_codex":0.00013656974,"about_ca_topic_score_gemma":0.00027975146,"teacher_disagreement_score":0.64033026,"about_ca_system_score_codex":0.000044652475,"about_ca_system_score_gemma":0.000023487022,"threshold_uncertainty_score":0.46448368},"labels":[],"label_agreement":null},{"id":"W1696090208","doi":"10.1007/bf03405245","title":"The Impact of Routine Immunization Using Meningococcal C Conjugate Vaccine on Invasive Meningococcal Disease in British Columbia","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"British Columbia Centre for Disease Control","keywords":"Medicine; Meningococcal vaccine; Incidence (geometry); Neisseria meningitidis; Conjugate vaccine; Meningococcal disease; Immunization; Population; Vaccination; Pediatrics; Demography; Immunology; Antigen; Environmental health; Biology","score_opus":0.03964059496482222,"score_gpt":0.2823843797004314,"score_spread":0.24274378473560917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1696090208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969795,0.0012913689,0.000038021884,0.00094224676,0.00046412426,0.00018738881,0.00007202816,0.000004402921,0.00002093411],"genre_scores_gemma":[0.999371,0.0003137811,0.00001388334,0.00007304319,0.00007923525,0.0000022477784,0.000034769888,0.000013912492,0.000098106226],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99814326,0.0005196153,0.0006925456,0.000107263746,0.000024465884,0.0005128461],"domain_scores_gemma":[0.9984582,0.000153061,0.0005053709,0.00015495744,0.00033659278,0.00039183203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010133368,0.00009480248,0.0003436342,0.00022012745,0.000657832,0.00009463369,0.00018905205,0.000092990325,0.00032675106],"category_scores_gemma":[0.0008329364,0.00009645533,0.000116259034,0.00036652814,0.000115621166,0.0001878326,0.000015033906,0.00035064793,0.000003083068],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059394766,0.000093688766,0.98687077,0.000010909457,0.00014007266,0.000033382334,0.00066245033,0.00021695741,0.0036688696,0.0000699382,0.00475508,0.003418497],"study_design_scores_gemma":[0.0017382089,0.0006329827,0.9932939,0.0001311017,0.0000078523535,0.00066254294,0.00020796822,0.000032229087,0.000048912712,0.000036064943,0.003110216,0.00009802884],"about_ca_topic_score_codex":0.55115324,"about_ca_topic_score_gemma":0.62006783,"teacher_disagreement_score":0.06891454,"about_ca_system_score_codex":0.0005932329,"about_ca_system_score_gemma":0.007796042,"threshold_uncertainty_score":0.99782884},"labels":[],"label_agreement":null},{"id":"W1702452676","doi":"10.1128/jcm.01447-15","title":"Comparison of Phenotypic and Genotypic Approaches to Capsule Typing of Neisseria meningitidis by Use of Invasive and Carriage Isolate Collections","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec","funders":"","keywords":"Carriage; Neisseria meningitidis; Genotyping; Biology; Multilocus sequence typing; Genotype; Microbiology; Typing; Serotype; Virology; Genetics; Medicine; Gene; Bacteria","score_opus":0.2583366282563189,"score_gpt":0.3647682154788934,"score_spread":0.10643158722257445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1702452676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961405,0.0023959994,0.00022936914,0.00015157687,0.00080603256,0.00014448428,0.00009614133,0.0000036551428,0.00003223914],"genre_scores_gemma":[0.99877554,0.00017201016,0.00081640173,0.000024535688,0.000044588833,0.0000015204433,0.000013691438,0.000009244507,0.00014247905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780124,0.00042060803,0.001454235,0.00016013115,0.0000073360475,0.00015644576],"domain_scores_gemma":[0.997758,0.00062603713,0.0011213834,0.00013156548,0.0002987471,0.00006430384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006315522,0.00013035405,0.0010580937,0.0001709109,0.000059834012,0.000007889142,0.000105152234,0.00032345657,0.000041688185],"category_scores_gemma":[0.0009240074,0.000104801096,0.00011686816,0.00017645805,0.0003138117,0.00008880236,0.000102548605,0.00028154568,0.0000017411463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080785557,0.00026039194,0.04001775,0.000032335654,0.00038796914,1.3840878e-7,0.00056637457,0.000016721982,0.9534849,0.00009949692,0.0037418536,0.0005841951],"study_design_scores_gemma":[0.009828663,0.012393971,0.07185281,0.00036637735,0.00086505973,0.0007436177,0.0023594606,0.000024203671,0.8604947,0.00051530986,0.040030316,0.00052551035],"about_ca_topic_score_codex":0.00015472202,"about_ca_topic_score_gemma":0.000091929054,"teacher_disagreement_score":0.09299022,"about_ca_system_score_codex":0.000012497291,"about_ca_system_score_gemma":0.00013665852,"threshold_uncertainty_score":0.42736647},"labels":[],"label_agreement":null},{"id":"W170499312","doi":"10.13189/ujmr.2013.010102","title":"Poor Association of Bordetella Bronchiseptica Infection with Kennel Cough in Dogs in Northern India","year":2013,"lang":"en","type":"article","venue":"Universal Journal of Microbiology Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bordetella bronchiseptica; Bordetella; Throat; Isolation (microbiology); Pathogen; Medicine; Multiplex polymerase chain reaction; Biology; Veterinary medicine; Microbiology; Polymerase chain reaction; Bacteria; Surgery","score_opus":0.012634753670700832,"score_gpt":0.2629379831244048,"score_spread":0.250303229453704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W170499312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985217,0.00019376933,0.000007633528,0.0003761235,0.0002229481,0.00021182602,0.000007685588,0.0000046355863,0.00045368625],"genre_scores_gemma":[0.9990531,0.00021633394,0.000033453154,0.000010833411,0.00003365667,0.0000024611766,0.000012138802,0.000009724408,0.00062828977],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981985,0.000826536,0.00043197162,0.000139785,0.000027225273,0.0003759463],"domain_scores_gemma":[0.9984779,0.00035860811,0.00031481418,0.00010019041,0.0007251609,0.00002335929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011791845,0.00010737232,0.00034555743,0.0009175914,0.00006421011,0.000010579277,0.00017039586,0.0003655783,0.0004712274],"category_scores_gemma":[0.00015789276,0.00008482027,0.000060391496,0.0005054919,0.00018029775,0.0002367222,0.000060903854,0.00088927057,0.00009053112],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027951735,0.00017462247,0.39215943,0.0000074197214,0.00008112293,0.000004116338,0.0002616497,0.000019487243,0.6060678,0.000037083206,0.0005255628,0.00038219168],"study_design_scores_gemma":[0.009320036,0.003276934,0.87414944,0.0002628936,0.000042305237,0.0005146532,0.001151906,0.0000028707284,0.09529458,0.00018874707,0.015519795,0.00027583042],"about_ca_topic_score_codex":0.003148325,"about_ca_topic_score_gemma":0.009045575,"teacher_disagreement_score":0.5107732,"about_ca_system_score_codex":0.00036458232,"about_ca_system_score_gemma":0.00022733536,"threshold_uncertainty_score":0.515961},"labels":[],"label_agreement":null},{"id":"W1715148135","doi":"10.4049/jimmunol.180.10.6827","title":"CEACAM1 Dynamics during <i>Neisseria gonorrhoeae</i> Suppression of CD4+ T Lymphocyte Activation","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Tyrosine phosphorylation; Proto-oncogene tyrosine-protein kinase Src; Cell biology; T-cell receptor; Phosphorylation; SH2 domain; Neisseria gonorrhoeae; Tyrosine kinase; Protein tyrosine phosphatase; Immune system; T cell; Signal transduction; Microbiology; Immunology","score_opus":0.009396919525354815,"score_gpt":0.21874524670777956,"score_spread":0.20934832718242474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1715148135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580604,0.0018544586,0.0001446194,0.00026842396,0.0016462007,0.00007825372,0.0000063560074,0.000014772575,0.00018088034],"genre_scores_gemma":[0.99719024,0.0022242283,0.000028603225,0.00001722827,0.00007078684,0.0000014090471,0.000011623654,0.000013663323,0.0004421995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988087,0.00032248494,0.0005665662,0.00007805656,0.0000117383515,0.0002124883],"domain_scores_gemma":[0.998648,0.00016383469,0.0007051206,0.0002527681,0.00021910781,0.000011156868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025907974,0.00013674905,0.00034876555,0.00017286523,0.00029111825,0.0000036413949,0.00030463657,0.00022264768,0.000283369],"category_scores_gemma":[0.0000820798,0.00008875567,0.00011811134,0.00017060833,0.00022346509,0.00019240104,0.000090312285,0.00034756956,0.000029485542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015335223,0.00010271105,0.0016656579,0.000008322732,0.00024793987,6.600705e-7,0.00039808534,0.000037434645,0.99448067,0.00013199121,0.00026573165,0.0011272487],"study_design_scores_gemma":[0.0026263099,0.00051331916,0.10912225,0.00007052933,0.00007780443,0.0057980036,0.00041515066,0.000005947604,0.8768347,0.000097844786,0.0043158727,0.00012231039],"about_ca_topic_score_codex":0.0001437224,"about_ca_topic_score_gemma":0.000010098476,"teacher_disagreement_score":0.11764603,"about_ca_system_score_codex":0.0000929353,"about_ca_system_score_gemma":0.000103253304,"threshold_uncertainty_score":0.3619351},"labels":[],"label_agreement":null},{"id":"W1722134483","doi":"10.4000/vertigo.12287","title":"La méningite, une maladie des « variations » : pratiques préventives et gestion des épidémies de méningite à Kombissiri et Réo Burkina Faso","year":2012,"lang":"fr","type":"article","venue":"VertigO","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Humanities; Political science; Art","score_opus":0.02408913820518992,"score_gpt":0.28536475960469454,"score_spread":0.2612756213995046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1722134483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95527226,0.019815668,0.014051785,0.0025858716,0.0019783606,0.00028140045,0.000099943565,0.00023243838,0.0056822468],"genre_scores_gemma":[0.97543895,0.0050448235,0.00509431,0.0001528563,0.00025666098,0.00007857308,0.00018110481,0.000052541167,0.01370017],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99676746,0.0016534539,0.00043619188,0.00031308943,0.000030233174,0.0007995821],"domain_scores_gemma":[0.9985654,0.0006489355,0.00021217881,0.00027825724,0.00018979266,0.00010544941],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008117551,0.00036993966,0.00036768432,0.00021360214,0.0006908618,0.00016187581,0.00015324685,0.0007362229,0.0011702637],"category_scores_gemma":[0.00063567807,0.00036702407,0.00017797977,0.00040529552,0.0006150537,0.0012867536,0.00013167803,0.0005921316,0.00024004115],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022043115,0.0016143261,0.40561712,0.00031795775,0.0010458067,0.0000062074328,0.03317377,0.00008708075,0.28561875,0.2455366,0.008633634,0.018128313],"study_design_scores_gemma":[0.0007161582,0.00034094907,0.75374776,0.0006004857,0.0003078777,0.000373171,0.0006280558,0.00002853687,0.020490188,0.0050565745,0.21730404,0.0004061965],"about_ca_topic_score_codex":0.0014502789,"about_ca_topic_score_gemma":0.0009815504,"teacher_disagreement_score":0.34813064,"about_ca_system_score_codex":0.00018335736,"about_ca_system_score_gemma":0.00018029551,"threshold_uncertainty_score":0.99987817},"labels":[],"label_agreement":null},{"id":"W1750689409","doi":"","title":"Meningitis and cochlear implantation","year":2003,"lang":"en","type":"article","venue":"Europe PMC (PubMed Central)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningitis; Cochlear implant; Medicine; Cochlear implantation; Implant; Bacterial meningitis; Pediatrics; Audiology; Surgery","score_opus":0.012154488209262657,"score_gpt":0.21248244713147954,"score_spread":0.2003279589222169,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1750689409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99104667,0.0008812197,0.000047079127,0.00009157418,0.0014582194,0.00014973267,0.000015622156,0.000070271395,0.006239619],"genre_scores_gemma":[0.99644005,0.0005123994,0.000048350572,0.00004419212,0.000044265587,0.000015787911,0.00003343955,0.000014157602,0.0028473386],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99912363,0.0001492547,0.00013665299,0.00017950412,0.000008443764,0.00040250705],"domain_scores_gemma":[0.99974394,0.00003358039,0.000045606903,0.000106687214,0.0000310601,0.000039101982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012756317,0.000100537276,0.00011370446,0.0000425563,0.00013419722,0.000031514435,0.000043171916,0.00006697522,0.0005247235],"category_scores_gemma":[0.000099141835,0.00008877248,0.000022386894,0.00010363929,0.000041017855,0.00008748572,0.000017189182,0.000106825544,0.00018456049],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014946188,0.00016576065,0.09764379,0.000029326477,0.00024847328,0.000014575642,0.0027843572,0.00000278052,0.82438797,0.020535681,0.011737699,0.042300135],"study_design_scores_gemma":[0.0008973993,0.000053143547,0.27399904,0.000007370411,0.00003054326,0.0003690111,0.00005284999,1.6377649e-7,0.08830976,0.000064737425,0.6360706,0.00014538672],"about_ca_topic_score_codex":0.000030455209,"about_ca_topic_score_gemma":0.000008608095,"teacher_disagreement_score":0.7360782,"about_ca_system_score_codex":0.000013756868,"about_ca_system_score_gemma":0.000016409187,"threshold_uncertainty_score":0.5745355},"labels":[],"label_agreement":null},{"id":"W1761874602","doi":"10.1128/jcm.38.12.4580-4585.2000","title":"Fluorescent Amplified-Fragment Length Polymorphism Genotyping of <i>Neisseria meningitidis</i> Identifies Clones Associated with Invasive Disease","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Neisseria meningitidis; Genotyping; Multilocus sequence typing; Biology; Pulsed-field gel electrophoresis; Outbreak; Typing; Amplified fragment length polymorphism; Molecular epidemiology; Meningococcal disease; Genotype; Microbiology; Neisseriaceae; Genetics; Virology; Population; Genetic diversity; Gene; Bacteria; Medicine","score_opus":0.02738730732153986,"score_gpt":0.2921845108741617,"score_spread":0.2647972035526218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1761874602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99479085,0.0023672415,0.0000314246,0.0005223514,0.0019177157,0.00017869935,0.00010386384,0.000021194814,0.000066638815],"genre_scores_gemma":[0.99793226,0.00094467035,0.00007177032,0.00015210117,0.00021715819,0.000004195112,0.00010507572,0.000022732123,0.0005500633],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99672806,0.0007104453,0.0018824115,0.00028295693,0.000019002646,0.00037709132],"domain_scores_gemma":[0.99704456,0.0008746995,0.0013387604,0.00026634513,0.00038201222,0.0000936208],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000900573,0.00025536647,0.0010577576,0.00014530591,0.00015192106,0.00001957028,0.00031724747,0.00037510908,0.0018250057],"category_scores_gemma":[0.0006158266,0.00018069726,0.00041775452,0.0001588457,0.00044118823,0.0001415727,0.00006585564,0.0005513083,0.00007234417],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038748858,0.001018738,0.031839512,0.000028628117,0.0015045792,0.000016485505,0.00014012776,0.000029327253,0.9533363,0.000125177,0.003685849,0.004400385],"study_design_scores_gemma":[0.01942801,0.006810349,0.55805063,0.0017427696,0.0020241928,0.0016115616,0.0003556619,0.0000019669963,0.3341713,0.0009063642,0.073672585,0.0012246],"about_ca_topic_score_codex":0.00004535713,"about_ca_topic_score_gemma":0.000087538334,"teacher_disagreement_score":0.619165,"about_ca_system_score_codex":0.000036394435,"about_ca_system_score_gemma":0.00027877567,"threshold_uncertainty_score":0.99908745},"labels":[],"label_agreement":null},{"id":"W1765131591","doi":"10.1016/j.molimm.2004.09.002","title":"Molecular analysis of monoclonal antibodies to group variant capsular polysaccharide of : recurrent heavy chains and alternative light chain partners","year":2004,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; University of Manitoba; Canadian Food Inspection Agency","funders":"","keywords":"Neisseria meningitidis; Biology; Epitope; Monoclonal antibody; Pathogen; Gene; Microbiology; Immunoglobulin light chain; Antibody; Virology; Genetics; Bacteria","score_opus":0.009648313726379523,"score_gpt":0.26211439754137045,"score_spread":0.2524660838149909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1765131591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826199,0.0060630953,0.009566943,0.00076798064,0.0005069302,0.00029474034,0.00008771417,0.0000308301,0.00006186025],"genre_scores_gemma":[0.999005,0.0003228953,0.0003896641,0.00010075091,0.000010494981,0.000035908626,0.000093609815,0.00002122572,0.000020402482],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825364,0.00025230745,0.00058567245,0.00046470048,0.000039642408,0.0004040239],"domain_scores_gemma":[0.9990271,0.000039184582,0.00027642975,0.0004530423,0.00016470767,0.00003955383],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022470547,0.00028832295,0.000832651,0.0008263575,0.00009551466,0.000010233042,0.00024109602,0.0002609264,0.00007450682],"category_scores_gemma":[0.00008727414,0.0002715371,0.00026908112,0.0007405132,0.00022960268,0.000056680252,0.00022450426,0.00021483673,0.000010322422],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030133268,0.00027808064,0.0003833226,0.000013540834,0.0048404746,0.000028007891,0.00084209105,0.00054651493,0.95720047,0.034668274,0.0000074514783,0.00089042966],"study_design_scores_gemma":[0.0014380303,0.00094856723,0.008128621,0.00004881448,0.000815085,0.00007581149,0.00018690774,0.000025837107,0.9867824,0.00060579873,0.00065746915,0.00028666438],"about_ca_topic_score_codex":0.001798675,"about_ca_topic_score_gemma":0.0001430163,"teacher_disagreement_score":0.03406248,"about_ca_system_score_codex":0.00005134787,"about_ca_system_score_gemma":0.000052566123,"threshold_uncertainty_score":0.99997365},"labels":[],"label_agreement":null},{"id":"W1782547675","doi":"10.1128/aac.00245-10","title":"Identification of TEM-135 β-Lactamase in Penicillinase-Producing<i>Neisseria gonorrhoeae</i>Strains in Japan","year":2010,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria gonorrhoeae; Plasmid; Typing; Microbiology; Multilocus sequence typing; Beta-lactamase; Biology; Neisseriaceae; Neisseria; Sequence analysis; Gene; Virology; Bacteria; Genotype; Genetics; Antibiotics; Escherichia coli","score_opus":0.009820429063321513,"score_gpt":0.24946938625082865,"score_spread":0.23964895718750714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1782547675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981234,0.00002627151,0.000004937544,0.0007213387,0.00076974824,0.00023888379,0.000032915737,0.000018980876,0.00006354565],"genre_scores_gemma":[0.99887246,0.00025569077,0.000024851917,0.0002610006,0.00004966826,0.000007989005,0.000057948233,0.000017295713,0.00045310147],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897206,0.000045046378,0.00044445443,0.0003064934,0.0000067380206,0.00022521653],"domain_scores_gemma":[0.99953234,0.000017709346,0.0001521806,0.00024073095,0.000040838066,0.000016189675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024494337,0.00015578461,0.0002670983,0.0001754309,0.00006726477,0.000024085224,0.00012222542,0.00020735883,0.00043659782],"category_scores_gemma":[0.000021472531,0.00014533493,0.0000526915,0.00020041957,0.000099370045,0.00011704138,0.000024424431,0.00024298449,0.00002314478],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008442995,0.00030605143,0.09567632,0.000022618551,0.000020841773,2.2545353e-7,0.0005999838,0.0000010706148,0.89857197,0.00007247187,0.0008435772,0.0038004736],"study_design_scores_gemma":[0.002053055,0.000060443876,0.56784075,0.000031310763,0.000009417196,0.000026381485,0.000089758636,0.0000068548557,0.42237502,0.00004220476,0.0072916006,0.00017322051],"about_ca_topic_score_codex":0.0008734117,"about_ca_topic_score_gemma":0.0011124164,"teacher_disagreement_score":0.47619691,"about_ca_system_score_codex":0.000011372521,"about_ca_system_score_gemma":0.000028522905,"threshold_uncertainty_score":0.59265864},"labels":[],"label_agreement":null},{"id":"W17864779","doi":"10.1037/e481832006-001","title":"Preventing Tetanus, Diphtheria, and Pertussis Among Adolescents: Use of Tetanus Toxoid, Reduced Diphtheria Toxoid and Acellular Pertussis Vaccines: Recommendations of the Advisory Committee on Immunization Practices (ACIP)","year":2006,"lang":"en","type":"article","venue":"PsycEXTRA Dataset","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":493,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tetanus; Diphtheria; Medicine; Toxoid; Booster dose; Immunization; Vaccination; Pertussis vaccine; Pediatrics; Whooping cough; Diphtheria toxin; Immunology; Antigen; Microbiology","score_opus":0.02565262410679828,"score_gpt":0.2658197417655994,"score_spread":0.24016711765880114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W17864779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910143,0.0009958452,0.000028194116,0.00062116084,0.00048548178,0.00047656635,0.006306067,0.000023707102,0.00004869064],"genre_scores_gemma":[0.9911688,0.0004926844,0.00016540414,0.00004314634,0.000047987523,0.000027497279,0.0078060986,0.000025185656,0.00022317382],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982268,0.00053481665,0.00061152625,0.00035720074,0.000039925224,0.00022972404],"domain_scores_gemma":[0.9979732,0.00028278763,0.00092222245,0.00070600613,0.00009189258,0.000023868468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031700698,0.000252429,0.00035625478,0.000117697025,0.00038126716,0.00006342824,0.000240266,0.00018979331,0.00026775265],"category_scores_gemma":[0.0003390154,0.00018388858,0.000072439245,0.00024263255,0.00018007161,0.0005429173,0.00018273585,0.00024191104,0.000004732777],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026202668,0.00084936473,0.11188524,0.00014430632,0.00024799665,3.993485e-7,0.00027109386,0.000008609201,0.8608555,0.00010238756,0.019795336,0.005577738],"study_design_scores_gemma":[0.002985661,0.00038851317,0.7323712,0.0008583624,0.0006459381,0.000090850925,0.0011078545,0.00004855097,0.09517608,0.00011531401,0.16561937,0.0005923002],"about_ca_topic_score_codex":0.0017737496,"about_ca_topic_score_gemma":0.00035627975,"teacher_disagreement_score":0.7656794,"about_ca_system_score_codex":0.000019258885,"about_ca_system_score_gemma":0.000024381558,"threshold_uncertainty_score":0.74987584},"labels":[],"label_agreement":null},{"id":"W1792427434","doi":"10.2223/jped.2167","title":"A critical appraisal of the recommendations for the use of meningococcal conjugate vaccines","year":2012,"lang":"en","type":"review","venue":"Jornal de Pediatria","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Herd immunity; Meningococcal vaccine; Meningococcal disease; Immunization; Incidence (geometry); Vaccination; Population; Epidemiology; Outbreak; Conjugate vaccine; Immunology; Pediatrics; Environmental health; Neisseria meningitidis; Virology; Antibody","score_opus":0.13778462638847008,"score_gpt":0.38836543222460795,"score_spread":0.25058080583613784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1792427434","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038251907,0.98972094,0.00033210247,0.00060944824,0.0072891074,0.0007306327,0.00090371113,0.000016125832,0.000015393394],"genre_scores_gemma":[0.0009442234,0.9968216,0.00032715983,0.000019938989,0.0012294877,0.00020740033,0.00011582663,0.00003306809,0.0003012834],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984142,0.00042533124,0.0007288959,0.0001470705,0.00001580652,0.00026870437],"domain_scores_gemma":[0.99205285,0.0069202273,0.0004953115,0.0003350195,0.00017634493,0.000020254125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044598297,0.00021335337,0.00080279884,0.00007524126,0.00021157162,0.000020970025,0.00029088667,0.00039237505,0.00041992287],"category_scores_gemma":[0.001553436,0.00010741922,0.0006998591,0.00016313099,0.00010551248,0.00009129459,0.00012812094,0.0003768118,0.000017779641],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045757322,0.00086581503,0.0014138228,0.011971206,0.0032899596,2.2617104e-7,0.00045526988,0.0000032238916,0.0024205593,0.024567407,0.17286956,0.78168535],"study_design_scores_gemma":[0.00032710296,0.000060194634,0.00016152843,0.0003187516,0.0029968699,0.00006624463,0.000010839446,0.0000011178979,0.0000489219,0.00002998826,0.995869,0.00010946378],"about_ca_topic_score_codex":0.00010758413,"about_ca_topic_score_gemma":0.000021837322,"teacher_disagreement_score":0.8229994,"about_ca_system_score_codex":0.000019308722,"about_ca_system_score_gemma":0.000193449,"threshold_uncertainty_score":0.45978612},"labels":[],"label_agreement":null},{"id":"W1793257299","doi":"10.1093/pch/14.8.515","title":"A new meningococcal conjugate vaccine: What should physicians know and do?","year":2009,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Paediatric Society","funders":"","keywords":"Conjugate; Medicine; Incidence (geometry); Immunization; Meningococcal vaccine; Conjugate vaccine; Pediatrics; Immunology; Antibody; Mathematics","score_opus":0.011549745912232897,"score_gpt":0.2692721013499576,"score_spread":0.2577223554377247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1793257299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72572935,0.16302823,0.0010290245,0.100793235,0.006103445,0.0013201555,0.00006719821,0.00053063646,0.0013987203],"genre_scores_gemma":[0.94323,0.046321247,0.00034289816,0.007853159,0.0014737005,0.000009706883,0.00012593022,0.000030490244,0.0006129129],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986627,0.000116390445,0.00035012528,0.00035168254,0.00002147358,0.000497637],"domain_scores_gemma":[0.99937725,0.000076591394,0.00017478855,0.0002323178,0.000047164496,0.00009190858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023982479,0.00021914425,0.00039370253,0.00014453456,0.00044391994,0.00009947695,0.00011438863,0.00021046067,0.00017324978],"category_scores_gemma":[0.00002741314,0.00019607393,0.00008069882,0.00028956847,0.000016111562,0.000275597,0.00004598682,0.00043110104,0.000114556926],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002650421,0.00032531336,0.007844412,0.000051000003,0.00010496498,0.0000016279006,0.0017779442,0.0000051134903,0.006849704,0.0071238196,0.1274798,0.84817123],"study_design_scores_gemma":[0.005506186,0.002175573,0.15299053,0.00016915423,0.00011154632,0.00015689872,0.00042121712,0.0000073615765,0.0013184039,0.001854531,0.83461154,0.0006770661],"about_ca_topic_score_codex":0.00026091415,"about_ca_topic_score_gemma":0.00007837632,"teacher_disagreement_score":0.8474942,"about_ca_system_score_codex":0.00004215573,"about_ca_system_score_gemma":0.00011696769,"threshold_uncertainty_score":0.79956627},"labels":[],"label_agreement":null},{"id":"W1804077313","doi":"10.1111/j.1574-6976.2010.00260.x","title":"Opa proteins and CEACAMs: pathways of immune engagement for pathogenic<i>Neisseria</i>","year":2010,"lang":"en","type":"review","venue":"FEMS Microbiology Reviews","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Bacterial adhesin; Immune system; Neisseria meningitidis; Innate immune system; Microbiology; Antibody; Neisseria; Immunology; Antigen; Virulence; Bacteria; Gene; Genetics","score_opus":0.06773457987711046,"score_gpt":0.31023224878411454,"score_spread":0.24249766890700408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1804077313","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009910442,0.9879139,0.00004199551,0.000017469709,0.002913934,0.0066080103,0.001387096,0.00005705554,0.00006946394],"genre_scores_gemma":[0.000026241807,0.99307114,0.00061087136,0.000029254456,0.00019999771,0.0021312505,0.0030537697,0.00008390153,0.00079359364],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951996,0.0011108249,0.0022480863,0.00083485746,0.0000046155074,0.0006020001],"domain_scores_gemma":[0.99684274,0.00030307096,0.0017748384,0.0009099118,0.0001296941,0.00003971297],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017420965,0.0008430253,0.004553906,0.0002380211,0.00029666294,0.000021216882,0.0005327012,0.0017129015,0.00040638825],"category_scores_gemma":[0.0002966527,0.0005895021,0.0012489994,0.00021289545,0.0003187421,0.00006274959,0.00033047076,0.0010538762,0.0002906773],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016261414,0.000103350634,0.0000018378959,0.0060507883,0.00023102477,1.5200024e-7,0.000035268502,2.194729e-9,0.46869564,0.0001823532,0.0013125482,0.52337074],"study_design_scores_gemma":[0.00065947726,0.00039185185,0.0000040687005,0.0044539394,0.0010678812,0.0004964669,0.0000086727105,1.2042887e-8,0.0020553325,0.000020449163,0.99030185,0.00053998927],"about_ca_topic_score_codex":0.00002677627,"about_ca_topic_score_gemma":0.000024953839,"teacher_disagreement_score":0.9889893,"about_ca_system_score_codex":0.0000366586,"about_ca_system_score_gemma":0.00019466481,"threshold_uncertainty_score":0.99965566},"labels":[],"label_agreement":null},{"id":"W182717293","doi":"10.1093/pch/10.2.107","title":"Corticosteroids for suspected bacterial meningitis in children – Status in 2005","year":2005,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Medicine; Bacterial meningitis; Meningitis; Pediatrics","score_opus":0.00900609075939768,"score_gpt":0.2570438855779509,"score_spread":0.2480377948185532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W182717293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99117523,0.00412365,0.00003850729,0.002037766,0.0011857097,0.00093128555,0.0002899966,0.000072771676,0.00014507445],"genre_scores_gemma":[0.99499077,0.002563252,0.00026606297,0.00025767565,0.00078526203,0.00007752943,0.0009248453,0.000029356936,0.000105260326],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978775,0.00016257053,0.0006662367,0.00035560745,0.00002036119,0.0009177553],"domain_scores_gemma":[0.9993828,0.00011273451,0.00019489694,0.0002001297,0.000039837312,0.0000696223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004036325,0.00020015234,0.0004125939,0.00041999615,0.00018080183,0.000026765358,0.00011855322,0.0002281735,0.00043609797],"category_scores_gemma":[0.00010324593,0.00020159665,0.00007388543,0.0003548043,0.000027574606,0.00013910365,0.00005087324,0.00034916066,0.000078787205],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005218624,0.000855431,0.9393701,0.0000403489,0.00006983451,5.793838e-7,0.0008069096,0.000033412816,0.0065800673,0.0007145015,0.010113645,0.040893283],"study_design_scores_gemma":[0.0063051647,0.00030847147,0.91180736,0.000022322745,0.000013589181,0.000041157207,0.000027943943,0.000007541385,0.00051387143,0.000046564357,0.08066383,0.00024218038],"about_ca_topic_score_codex":0.0017058945,"about_ca_topic_score_gemma":0.0062961527,"teacher_disagreement_score":0.07055018,"about_ca_system_score_codex":0.00029634932,"about_ca_system_score_gemma":0.00021716894,"threshold_uncertainty_score":0.8220873},"labels":[],"label_agreement":null},{"id":"W182891392","doi":"10.1155/2007/295973","title":"Usefulness of Pulsed‐Field Gel Electrophoresis in Tracking Two Outbreaks of Invasive Meningococcal Disease Serogroup C in British Columbia","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; BC Centre for Disease Control; University of British Columbia","funders":"Canadian Institutes of Health Research; Health Canada; University of British Columbia","keywords":"Pulsed-field gel electrophoresis; Outbreak; Epidemiology; Meningococcal disease; Molecular epidemiology; Genotype; Biology; Virology; Microbiology; Neisseria meningitidis; Medicine; Genetics; Bacteria; Gene; Internal medicine","score_opus":0.0060273063971007694,"score_gpt":0.22110742281413517,"score_spread":0.2150801164170344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W182891392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948075,0.0041000945,0.000046192043,0.00008803999,0.0006702572,0.00015033934,0.000107689266,0.000004467821,0.000025466426],"genre_scores_gemma":[0.9993789,0.0003456228,0.0000038579415,0.00013865693,0.00007340821,0.0000044695353,0.000028066312,0.0000120715395,0.000014913845],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982932,0.0001939175,0.00083957653,0.00018877212,0.000020701014,0.00046381436],"domain_scores_gemma":[0.99863786,0.00039489495,0.00031559906,0.00010102788,0.00020082241,0.00034982522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042263244,0.00012689504,0.0005851278,0.00039822413,0.0000796378,0.000024406101,0.0001568309,0.00029738256,0.00083033065],"category_scores_gemma":[0.001138771,0.00015346902,0.00013852265,0.00028383653,0.00036026438,0.00008872336,0.000029022203,0.00042618805,9.934201e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001638191,0.00020564499,0.9123507,0.0000635694,0.00010119422,0.00021809914,0.00008853176,0.000003386241,0.071961015,0.000030472052,0.00032941467,0.014484144],"study_design_scores_gemma":[0.00430913,0.0007616464,0.9862536,0.00053386175,0.000114285576,0.001757804,0.0002903862,8.757956e-7,0.0041655833,0.00028868087,0.0013145922,0.00020951054],"about_ca_topic_score_codex":0.21845599,"about_ca_topic_score_gemma":0.896452,"teacher_disagreement_score":0.67799604,"about_ca_system_score_codex":0.00011015265,"about_ca_system_score_gemma":0.0013237912,"threshold_uncertainty_score":0.9091538},"labels":[],"label_agreement":null},{"id":"W1835382735","doi":"10.1080/21645515.2015.1046662","title":"Universal tetanus, diphtheria, acellular pertussis (Tdap) vaccination of adults: What Canadian health care providers know and need to know","year":2015,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St Martha's Regional Hospital; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; St. Francis Xavier University; Dalhousie University","funders":"Sanofi Pasteur; GlaxoSmithKline","keywords":"Diphtheria; Medicine; Tetanus; Focus group; Vaccination; Family medicine; Whooping cough; Health care; Public health; Pertussis vaccine; Pediatrics; Immunization; Nursing; Immunology","score_opus":0.01577403086118014,"score_gpt":0.2583059918572653,"score_spread":0.24253196099608518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1835382735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91990924,0.07467583,0.000060482464,0.0028636383,0.0012928065,0.00087949476,0.00006919049,0.00009623755,0.00015307024],"genre_scores_gemma":[0.9960956,0.0020586136,0.0001234619,0.00044208136,0.0000831736,0.000022369388,0.00026175493,0.000060265225,0.0008526682],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983823,0.0002161228,0.00049517,0.00037112183,0.000039107672,0.0004962229],"domain_scores_gemma":[0.99868214,0.000041889518,0.00022681797,0.0004545392,0.0004507835,0.00014383953],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021401052,0.00032723867,0.0004973079,0.0004157212,0.00040062566,0.00010912009,0.00025512275,0.00026649286,0.00035444004],"category_scores_gemma":[0.00002205838,0.00030684905,0.00009089022,0.00031006846,0.00004118015,0.00043523483,0.00007267525,0.00020575289,0.00004310063],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002205382,0.0006186019,0.021412449,0.0004530232,0.0015342415,0.0000059136487,0.087229036,0.000058097663,0.38711822,0.0026070052,0.014634749,0.4821233],"study_design_scores_gemma":[0.010286755,0.0032800934,0.0324329,0.0006411954,0.00024170251,0.00008978459,0.062462762,0.000019211575,0.023597019,0.00013228328,0.8656896,0.0011267493],"about_ca_topic_score_codex":0.05194997,"about_ca_topic_score_gemma":0.07163747,"teacher_disagreement_score":0.8510548,"about_ca_system_score_codex":0.00034432462,"about_ca_system_score_gemma":0.00041236883,"threshold_uncertainty_score":0.99993837},"labels":[],"label_agreement":null},{"id":"W1863536245","doi":"10.1016/s1473-3099(15)00297-2","title":"Typing of Neisseria meningitidis by whole-genome analysis","year":2015,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Neisseria meningitidis; Typing; Microbiology; Biology; Genome; Computational biology; Genetics; Virology; Bacteria; Gene","score_opus":0.020225345543993675,"score_gpt":0.25811312259724334,"score_spread":0.23788777705324965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1863536245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69347167,0.048354473,0.00026419212,0.20860626,0.0077667413,0.0016636236,0.028350709,0.0016264518,0.009895863],"genre_scores_gemma":[0.8899241,0.0007231032,0.0000045609327,0.070195585,0.005252337,0.00021722283,0.025218286,0.00013718723,0.008327591],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99841636,0.00037581698,0.0003885615,0.0003416753,0.000027330605,0.0004502553],"domain_scores_gemma":[0.99842715,0.00019579066,0.00040987917,0.0007535108,0.0001886741,0.000025013233],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017904914,0.00034438193,0.0010668255,0.00024480937,0.00022476807,0.000055559,0.0003890591,0.0005080776,0.0010849707],"category_scores_gemma":[0.00009905661,0.00024277753,0.00040638348,0.00058767013,0.00018018839,0.00007999061,0.00012244987,0.00071594573,0.0002575893],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052745436,0.00007571088,0.0072690374,0.00007087527,0.003925471,0.0000013663622,0.00007475126,0.00002579367,0.0217927,0.000019728865,0.9665156,0.00017623651],"study_design_scores_gemma":[0.0006520947,0.00011505734,0.0036014698,0.000026483476,0.0031936646,0.000021580021,0.000020957465,0.0000011646007,0.00022369211,0.00027180574,0.9915702,0.00030186944],"about_ca_topic_score_codex":0.0005640132,"about_ca_topic_score_gemma":0.0000409388,"teacher_disagreement_score":0.19645244,"about_ca_system_score_codex":0.000066701614,"about_ca_system_score_gemma":0.00008585116,"threshold_uncertainty_score":0.99982816},"labels":[],"label_agreement":null},{"id":"W1866797630","doi":"10.1186/1471-2334-6-62","title":"Evaluation of real-time PCR for diagnosis of Bordetella pertussis infection","year":2006,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; University of Calgary; Provincial Laboratory of Public Health","funders":"","keywords":"Bordetella pertussis; Polymerase chain reaction; Medicine; Microbiology; Real-time polymerase chain reaction; Bordetella; Pertussis toxin; Parasitology; Whooping cough; Medical microbiology; Virology; Direct fluorescent antibody; Biology; Antigen; Immunology; Bacteria; Pathology; Internal medicine; Genetics; Gene","score_opus":0.02044896674746047,"score_gpt":0.2797967425135205,"score_spread":0.25934777576606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1866797630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99616647,0.0005990547,0.00016468705,0.000010171529,0.00065332034,0.0006417316,0.0002323423,0.00010167687,0.0014305401],"genre_scores_gemma":[0.9987826,0.00016129718,0.000022546888,0.0000031445652,0.00012400873,0.00041296548,0.00027458172,0.00001901514,0.00019986919],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988786,0.0002824873,0.00040174785,0.00021084183,0.000047550362,0.00017877537],"domain_scores_gemma":[0.9983495,0.00035729381,0.00028931204,0.00021778533,0.00077061536,0.000015509104],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036278513,0.00015300671,0.0003114502,0.00020130165,0.00014479816,0.000010443202,0.000049877475,0.00015944113,0.0010511182],"category_scores_gemma":[0.00044634842,0.00012607424,0.00025119903,0.00020678768,0.0000858383,0.00010755667,0.000023469182,0.000039424576,0.00003348854],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015327676,0.0011860183,0.8569986,0.00013718974,0.00020669455,2.7728033e-8,0.000030005081,0.00058607495,0.1268523,0.00044227453,0.003982628,0.009424883],"study_design_scores_gemma":[0.0035731771,0.0006431882,0.8804688,0.000063681946,0.0016179177,0.000008995905,0.000014574951,0.00017418286,0.1070814,0.0020627722,0.0040394687,0.00025185637],"about_ca_topic_score_codex":0.0028786706,"about_ca_topic_score_gemma":0.0005721143,"teacher_disagreement_score":0.023470165,"about_ca_system_score_codex":0.00006949467,"about_ca_system_score_gemma":0.00015031156,"threshold_uncertainty_score":0.9998621},"labels":[],"label_agreement":null},{"id":"W1871880958","doi":"10.1111/j.1742-4658.2007.06011.x","title":"Novel globoside‐like oligosaccharide expression patterns in nontypeable <i>Haemophilus influenzae</i> lipopolysaccharide","year":2007,"lang":"en","type":"article","venue":"FEBS Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Medical Research Council; Vetenskapsrådet","keywords":"Heptose; Chemistry; Oligosaccharide; Haemophilus influenzae; Lipid A; Lipopolysaccharide; Phosphocholine; Carbohydrate conformation; Biochemistry; Mutant; Stereochemistry; Nuclear magnetic resonance spectroscopy; Molecular biology; Biology; Antibiotics; Gene","score_opus":0.018454764479774198,"score_gpt":0.26372866043389875,"score_spread":0.24527389595412455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1871880958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99022555,0.0008285711,0.0038977826,0.00014868978,0.004254636,0.00013335644,0.000027568438,0.000055853445,0.0004279998],"genre_scores_gemma":[0.99798363,0.00020621033,0.00029088487,0.0004124838,0.00047292534,0.000005720991,0.000018491279,0.000027229735,0.0005824429],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829584,0.00007239949,0.0006677527,0.00026303588,0.000042674925,0.00065827445],"domain_scores_gemma":[0.99920917,0.00009476965,0.0002585901,0.00025525285,0.00010197879,0.00008023474],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00075828825,0.00024175798,0.00033044664,0.00033080173,0.00033803823,0.000080078935,0.0002805676,0.00032782488,0.001464211],"category_scores_gemma":[0.00006301808,0.00020417634,0.0001326168,0.00015365316,0.00004201487,0.00039249746,0.00012007555,0.0008182877,0.00035194878],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024668596,0.00019459252,0.08736498,0.000008955073,0.00004009074,0.000023100903,0.00019370287,0.000024757026,0.9075326,0.00007984017,0.0024341347,0.0018565645],"study_design_scores_gemma":[0.005245899,0.00028211897,0.22405481,0.00036385277,0.000049004277,0.005232707,0.00030565765,0.0000042208862,0.70200753,0.0002681599,0.06160019,0.000585862],"about_ca_topic_score_codex":0.0007922057,"about_ca_topic_score_gemma":0.00072276033,"teacher_disagreement_score":0.20552509,"about_ca_system_score_codex":0.00011789903,"about_ca_system_score_gemma":0.00006440272,"threshold_uncertainty_score":0.9994486},"labels":[],"label_agreement":null},{"id":"W1874209828","doi":"","title":"Do all Canadian children have enough zinc?","year":2013,"lang":"en","type":"letter","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Advisory committee; Pregnancy; Pertussis vaccine; Medicine; Immunization; Family medicine; Political science; Immunology; Public administration; Biology","score_opus":0.017901088368531125,"score_gpt":0.2006353055192135,"score_spread":0.18273421715068236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1874209828","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08654358,0.003971042,0.0000010461586,0.869326,0.011400053,0.0033674196,0.0011784354,0.0002662465,0.023946151],"genre_scores_gemma":[0.15461648,0.0004111432,0.000009732662,0.66171324,0.0090179285,0.0059264577,0.011847192,0.00019234646,0.15626547],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99812174,0.00013894946,0.00026959836,0.0004317191,0.000014976159,0.0010230165],"domain_scores_gemma":[0.9992103,0.000044851684,0.00012354492,0.00048714597,0.00007093224,0.000063197775],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011323339,0.00033539004,0.00040060357,0.00027984887,0.00018189951,0.00010107852,0.0003411049,0.00177413,0.0036537286],"category_scores_gemma":[0.000035740428,0.0002918356,0.0001561082,0.00006284025,0.00007331913,0.00008876943,0.000065318105,0.0013405032,0.0025308148],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000035629407,0.0000113034475,0.0011871263,0.0000069207467,0.00043806934,0.0000052437454,0.000021312508,4.843288e-8,0.000059115435,0.000022453822,0.9840207,0.014224138],"study_design_scores_gemma":[0.00041933198,0.000012481676,0.09259519,0.000005174595,0.000085666965,0.0001412495,0.0000020759683,8.619136e-9,0.0002114563,0.00003977142,0.9061753,0.00031228975],"about_ca_topic_score_codex":0.29275233,"about_ca_topic_score_gemma":0.03199658,"teacher_disagreement_score":0.26075575,"about_ca_system_score_codex":0.00014961255,"about_ca_system_score_gemma":0.00008851868,"threshold_uncertainty_score":0.9999534},"labels":[],"label_agreement":null},{"id":"W189977010","doi":"10.1093/pch/13.7.597","title":"Genetics and the myth of vaccine encephalopathy","year":2008,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Measles; Rubella; Medicine; Measles-Mumps-Rubella Vaccine; Pediatrics; Outbreak; Public health; Vaccine-preventable diseases; Whooping cough; Immunization; Vaccination; Rubella vaccine; Tetanus; Environmental health; Virology; Immunology","score_opus":0.010629147057753094,"score_gpt":0.23637173434138858,"score_spread":0.2257425872836355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W189977010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9345104,0.05669854,0.000113153386,0.0069771637,0.0009039188,0.00029620077,0.000031853833,0.000031744967,0.00043698956],"genre_scores_gemma":[0.9557016,0.042868324,0.000080506485,0.001047785,0.00018989052,0.00000450193,0.000020941594,0.000008354237,0.000078102035],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99914604,0.00016368965,0.00031856142,0.0001441981,0.000015393109,0.0002121315],"domain_scores_gemma":[0.99939895,0.00014584226,0.00018135337,0.00019140133,0.000056701574,0.000025730973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003449122,0.00009942445,0.00027533292,0.00007578961,0.0004156074,0.0000035181777,0.00009373105,0.00008897799,0.000055670644],"category_scores_gemma":[0.000055429835,0.00006384977,0.000053107757,0.0001964628,0.00010282043,0.00002606616,0.00005937445,0.000196521,0.000021694941],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018110086,0.001413739,0.7043748,0.00053919095,0.0005573653,0.0000049213722,0.023764977,0.00003880856,0.008546595,0.038980953,0.13243105,0.08753658],"study_design_scores_gemma":[0.011680073,0.00084120524,0.7255182,0.000030070029,0.00009953642,0.0008443793,0.00031086148,0.000014716395,0.0018529189,0.0008169416,0.2576387,0.00035237285],"about_ca_topic_score_codex":0.00030633216,"about_ca_topic_score_gemma":0.000021212214,"teacher_disagreement_score":0.12520765,"about_ca_system_score_codex":0.000011232221,"about_ca_system_score_gemma":0.000082797706,"threshold_uncertainty_score":0.31965584},"labels":[],"label_agreement":null},{"id":"W191468033","doi":"10.1093/pch/12.1.37a","title":"Case 2: Neonatal seizures","year":2007,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Lumbar puncture; Complete blood count; Physical examination; Blood culture; Anesthesia; Pediatrics; Surgery; Past medical history; Antibiotics; Internal medicine; Cerebrospinal fluid","score_opus":0.012723897710528172,"score_gpt":0.27066381506188375,"score_spread":0.2579399173513556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W191468033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97500885,0.014151773,0.0013725297,0.0018552218,0.0043109264,0.00031285072,0.00009828915,0.00021485037,0.0026747005],"genre_scores_gemma":[0.99730164,0.0005802028,0.0001551345,0.00081443985,0.000668478,0.0000037166124,0.00010072341,0.00001659426,0.00035907008],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988424,0.00007682069,0.0003436501,0.00022308249,0.00001472801,0.00049931876],"domain_scores_gemma":[0.99940604,0.00013942877,0.00013109854,0.00020480258,0.000051116363,0.00006749399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066757516,0.00013752628,0.00020590198,0.0001862015,0.00058708654,0.000013791117,0.00008293358,0.00017954766,0.0004501998],"category_scores_gemma":[0.000061631625,0.000121706384,0.000077050216,0.00028684898,0.00003431011,0.00006489674,0.000052416486,0.00035707696,0.0003715164],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006154812,0.0011950032,0.10326645,0.00034006432,0.00040817907,0.0014064382,0.005855648,0.000014504964,0.0038832,0.025366543,0.24021643,0.61743206],"study_design_scores_gemma":[0.0019455419,0.00040851164,0.03891772,0.000013501089,0.000035457062,0.028923234,0.00039113645,0.0000012306197,0.0012223737,0.0001827538,0.9275941,0.0003644093],"about_ca_topic_score_codex":0.0010670227,"about_ca_topic_score_gemma":0.0007497345,"teacher_disagreement_score":0.6873777,"about_ca_system_score_codex":0.000056492816,"about_ca_system_score_gemma":0.00008661317,"threshold_uncertainty_score":0.49630424},"labels":[],"label_agreement":null},{"id":"W1919197182","doi":"10.1139/w08-142","title":"Étude de la résistance aux β-lactamines et des marqueurs moléculaires chez 157 souches d’Haemophilus influenzae isolées chez l’enfant à Tunis","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Microbiology; Amoxicillin; Agar dilution; Clavulanic acid; Haemophilus; Pasteurellaceae; Biology; Serotype; Penicillin; Tetracycline; Minimum inhibitory concentration; Bacteria; Molecular biology; Antibiotics; Genetics","score_opus":0.013835039760593621,"score_gpt":0.2545133022730915,"score_spread":0.24067826251249788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1919197182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987998,0.008465103,0.000086958986,0.0018990693,0.00074810704,0.0001048289,0.0001026726,0.000027333874,0.00056789943],"genre_scores_gemma":[0.99743253,0.00048327248,0.0003068396,0.0012776646,0.00016116143,0.000003201699,0.000042498505,0.000024855868,0.00026800006],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978087,0.0006282747,0.0005979286,0.00024674032,0.000011050304,0.0007073203],"domain_scores_gemma":[0.99874246,0.00019184782,0.00035240166,0.00023018879,0.00029051286,0.00019258012],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006866444,0.00031860033,0.00057736697,0.00044107428,0.00039527833,0.0000679586,0.0004334517,0.0005583347,0.0005009975],"category_scores_gemma":[0.00031156922,0.0002749731,0.00023621076,0.0002143234,0.00081187807,0.00018120755,0.000025198424,0.0006086841,0.000041488034],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013120961,0.000065049346,0.022841297,0.000014120751,0.00023772808,0.00007373313,0.0014527256,0.00003264957,0.966575,0.0012712146,0.0054041846,0.0019010494],"study_design_scores_gemma":[0.0030842898,0.0013549734,0.49515757,0.00028462973,0.0002431687,0.017495366,0.0008644411,0.0000018799356,0.21782374,0.0032852215,0.25955617,0.0008485436],"about_ca_topic_score_codex":0.0056039556,"about_ca_topic_score_gemma":0.029495649,"teacher_disagreement_score":0.7487513,"about_ca_system_score_codex":0.00019011204,"about_ca_system_score_gemma":0.0012594544,"threshold_uncertainty_score":0.99997026},"labels":[],"label_agreement":null},{"id":"W1926560524","doi":"10.1046/j.1365-2958.2003.03591.x","title":"Immunoreceptor tyrosine‐based activation motif phosphorylation during engulfment of <i>Neisseria gonorrhoeae</i> by the neutrophil‐restricted CEACAM3 (CD66d) receptor","year":2003,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Phosphorylation; Biology; Tyrosine phosphorylation; Tyrosine; Neisseria gonorrhoeae; Src family kinase; Cytochalasin D; Cell biology; Tyrosine kinase; Proto-oncogene tyrosine-protein kinase Src; Microbiology; Neisseria; Phagocytosis; Cytoskeleton; Signal transduction; Biochemistry; Bacteria; Cell; Genetics","score_opus":0.005046822090538733,"score_gpt":0.19699261589585879,"score_spread":0.19194579380532006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1926560524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99510497,0.0017623324,0.0007797145,0.0002782821,0.001244858,0.00051962136,0.00011245238,0.00007147161,0.00012630844],"genre_scores_gemma":[0.998206,0.00006378815,0.00013041175,0.00012714697,0.000024145987,0.00006636081,0.0010883579,0.000038266568,0.00025551495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800885,0.0006082543,0.0005347294,0.00041330894,0.000009941723,0.00042494189],"domain_scores_gemma":[0.99889183,0.00009606918,0.0003507688,0.0004705254,0.00016743773,0.00002336298],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016415538,0.00031408094,0.00037105306,0.00013481152,0.00029378373,0.000021316418,0.00024739423,0.00042559492,0.0011196003],"category_scores_gemma":[0.000098226,0.0002503827,0.00016967914,0.00039564483,0.00018499594,0.000073533636,0.00005211776,0.00031976195,0.0001193546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000229914,0.00021356618,0.000657669,0.000015786783,0.00015072414,1.250729e-7,0.000052224306,0.000057070603,0.9961947,0.0003343176,0.0017741874,0.00031968078],"study_design_scores_gemma":[0.0016716501,0.00020329411,0.0018444012,0.000019665667,0.000047155856,0.000037896676,0.00004102214,0.0000016290003,0.9252461,0.000014792534,0.07064437,0.00022797969],"about_ca_topic_score_codex":0.00015911735,"about_ca_topic_score_gemma":0.0000042804686,"teacher_disagreement_score":0.07094859,"about_ca_system_score_codex":0.00009877092,"about_ca_system_score_gemma":0.00006251263,"threshold_uncertainty_score":0.9999948},"labels":[],"label_agreement":null},{"id":"W193906967","doi":"10.1016/j.ccc.2013.03.001","title":"Severe Meningococcal Infection","year":2013,"lang":"en","type":"review","venue":"Critical Care Clinics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre; Royal Inland Hospital; University of Calgary; Alberta Health Services","funders":"","keywords":"Medicine; Neisseria meningitidis; Petechial rash; Meningitis; Incidence (geometry); Serotype; Sepsis; Rash; Epidemiology; Meningococcal Infections; Antimicrobial; Intensive care medicine; Meningococcal disease; Pathogen; Immunology; Pediatrics; Dermatology; Internal medicine; Microbiology; Surgery; Bacteria","score_opus":0.08998253680395177,"score_gpt":0.41317286323823715,"score_spread":0.32319032643428536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W193906967","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010129706,0.99012005,0.00003240729,0.00002106815,0.0074587897,0.00045859444,0.000121185665,0.00017230221,0.0015143037],"genre_scores_gemma":[0.00023635535,0.9973298,0.000044095552,0.000035514255,0.0005311017,0.00019978506,0.0005710254,0.000055248176,0.0009970886],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99800885,0.00039568648,0.00073618395,0.00045731376,0.000014655376,0.00038728555],"domain_scores_gemma":[0.9981876,0.00093432126,0.00012207692,0.00041101078,0.00029320936,0.00005178383],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013661824,0.00039155775,0.001321285,0.000117235715,0.00023500524,0.00006817795,0.00016357258,0.0015997344,0.0025767102],"category_scores_gemma":[0.00082319527,0.00030866466,0.0006694407,0.00016016873,0.00017485002,0.000100233585,0.00015370172,0.0010430636,0.0062887217],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000032022072,0.00006799617,0.00002082522,0.0067321663,0.000121058256,0.0000013561743,0.00002222968,2.2509157e-8,0.000013577279,0.003023294,0.005131102,0.98486316],"study_design_scores_gemma":[0.00017721485,0.00017984131,0.00000591853,0.0015406203,0.0008769539,0.00014597608,0.00002081902,5.4675255e-8,0.0000067929127,0.00006010218,0.9966137,0.000372021],"about_ca_topic_score_codex":0.000043671385,"about_ca_topic_score_gemma":0.000007776402,"teacher_disagreement_score":0.99148256,"about_ca_system_score_codex":0.00008695143,"about_ca_system_score_gemma":0.00017485296,"threshold_uncertainty_score":0.9999365},"labels":[],"label_agreement":null},{"id":"W1954102985","doi":"10.1155/2013/828730","title":"Emergence of Non‐Serotype b Encapsulated <i>Haemophilus influenzae</i> as a Cause of Pediatric Meningitis in Northwestern Ontario","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Public Health Agency of Canada; Toronto Public Health; NOSM University","funders":"Hort Innovation; Northwestern University","keywords":"Meningitis; Haemophilus influenzae; Serotype; Bacterial meningitis; Microbiology; Medicine; Virology; Haemophilus; Pediatrics; Antibiotics; Biology; Bacteria","score_opus":0.006575821529964734,"score_gpt":0.21898937358479773,"score_spread":0.21241355205483298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1954102985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957352,0.0027560445,0.000007292543,0.00008879261,0.0010907816,0.00017007306,0.000058129917,0.0000044505905,0.0000892032],"genre_scores_gemma":[0.99922854,0.0004938095,0.0000058636188,0.00010705845,0.00007029551,0.0000062214244,0.000024525418,0.000009894115,0.000053807926],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99861324,0.00011551703,0.0007632406,0.00015692732,0.000018562681,0.0003325412],"domain_scores_gemma":[0.9988011,0.00009232752,0.0003917596,0.00012193166,0.0003058841,0.00028700294],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013761283,0.00016601777,0.00052826706,0.00044506384,0.00006847342,0.000008055591,0.00016088667,0.00033033057,0.0047521745],"category_scores_gemma":[0.00017098241,0.00013868701,0.00011560866,0.00024017187,0.00027912934,0.00010882455,0.000033682605,0.00034075184,0.00002311565],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004987352,0.00011539325,0.92945224,0.000040754177,0.00019453124,0.00003877232,0.00062950875,0.0000059727804,0.06650904,0.000035877198,0.0013863645,0.0015416831],"study_design_scores_gemma":[0.004020525,0.001951541,0.98272604,0.00021038258,0.00030980984,0.0033480048,0.00027392543,0.0000015777032,0.0029931578,0.00028772166,0.003549588,0.00032770802],"about_ca_topic_score_codex":0.43687624,"about_ca_topic_score_gemma":0.4757943,"teacher_disagreement_score":0.06351588,"about_ca_system_score_codex":0.000051781226,"about_ca_system_score_gemma":0.001659269,"threshold_uncertainty_score":0.99615765},"labels":[],"label_agreement":null},{"id":"W1954110776","doi":"10.1186/s12879-015-1015-8","title":"The impact of aggregating serogroups in dynamic models of Neisseria meningitidis transmission","year":2015,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Neisseria meningitidis; Carriage; Strain (injury); Neisseria; Medical microbiology; Transmission (telecommunications); Vaccination; Pathogen; Microbiology; Virology; Meningococcal vaccine; Meningococcal disease; Vaccine efficacy; Medicine; Biology; Bacteria; Genetics; Computer science","score_opus":0.019506269031566447,"score_gpt":0.2854493212882711,"score_spread":0.26594305225670467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1954110776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99575347,0.0029557596,0.0004991719,0.000006030455,0.00022594152,0.0001883571,0.000037886985,0.00004365674,0.00028970581],"genre_scores_gemma":[0.9997455,0.000111965186,0.000016198052,0.0000010376323,0.000011784811,0.000022518663,0.0000364226,0.000012693272,0.000041883886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991412,0.00017977957,0.00033381174,0.00013231882,0.000015008748,0.00019788138],"domain_scores_gemma":[0.9993194,0.00016657646,0.00018500617,0.0001845275,0.0001110063,0.00003350701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015243325,0.00013177416,0.0002483198,0.00009748433,0.00010019833,0.000012419515,0.000094069175,0.00009457335,0.000049235663],"category_scores_gemma":[0.00010008704,0.00008597098,0.00017625919,0.00022028708,0.000086419954,0.0001449966,0.000029858917,0.00008533593,0.000004962113],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012982077,0.0011466811,0.6911757,0.00011867943,0.0003467892,7.230805e-7,0.0012730105,0.020505441,0.2646578,0.0010021604,0.00028316927,0.018191643],"study_design_scores_gemma":[0.012328935,0.0030759708,0.9276731,0.0005800776,0.00031714566,0.00015092507,0.0015248696,0.010912278,0.02388439,0.018411173,0.0003453742,0.0007957406],"about_ca_topic_score_codex":0.0015759191,"about_ca_topic_score_gemma":0.000297421,"teacher_disagreement_score":0.24077341,"about_ca_system_score_codex":0.00006012068,"about_ca_system_score_gemma":0.0001595575,"threshold_uncertainty_score":0.3505795},"labels":[],"label_agreement":null},{"id":"W1963649327","doi":"10.1074/jbc.m110.115121","title":"Antigenic Variation among Bordetella","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Bordetella bronchiseptica; Bordetella; Residue (chemistry); Chemistry; Microbiology; Antigen; Biology; Biochemistry; Stereochemistry; Bordetella pertussis; Bacteria; Genetics","score_opus":0.011647197930304356,"score_gpt":0.23801238755513107,"score_spread":0.2263651896248267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963649327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99758875,0.00015446244,0.000041019666,0.000091551636,0.0010814659,0.00002248193,0.0000033643646,0.0000146699485,0.0010022467],"genre_scores_gemma":[0.9991836,0.0000659936,0.000092505805,0.000015301921,0.00032907203,7.449285e-7,0.000008360136,0.0000033270169,0.00030109702],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999463,0.000028647473,0.00028822102,0.000084504245,0.000009783914,0.00012584584],"domain_scores_gemma":[0.9994533,0.00006526652,0.00025015656,0.00009378025,0.000113597394,0.000023906481],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022668573,0.00008132604,0.00017454577,0.000018701097,0.00006838828,0.000013350752,0.00013232617,0.00037109235,0.0031986665],"category_scores_gemma":[0.0002117685,0.000052150688,0.00011651111,0.00005926497,0.00008590671,0.000050947823,0.000027709268,0.00048671028,0.00003358403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043315722,0.000069105365,0.030116508,0.000002944589,0.000042127762,0.0000014031191,0.000010676787,3.2544963e-7,0.96845007,0.000018946957,0.00035524534,0.000889323],"study_design_scores_gemma":[0.00040902832,0.00009230403,0.21840556,0.0000059779045,0.000015484875,0.00034319033,0.00001203661,5.5478193e-7,0.7586993,0.00017195678,0.021767583,0.000077047305],"about_ca_topic_score_codex":0.0000070224055,"about_ca_topic_score_gemma":0.0000013776989,"teacher_disagreement_score":0.2097508,"about_ca_system_score_codex":0.00000732828,"about_ca_system_score_gemma":0.000024685256,"threshold_uncertainty_score":0.99771255},"labels":[],"label_agreement":null},{"id":"W1963802750","doi":"10.1021/bc100299g","title":"Study of Various Presentation Forms for a Peptide Mimetic of<i>Neisseria meningitidis</i>Serogroup B Capsular Polysaccharide","year":2010,"lang":"en","type":"article","venue":"Bioconjugate Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada","keywords":"Neisseria meningitidis; Peptide; Epitope; Antigen; Chemistry; Toxoid; Peptide vaccine; Antibody; Virology; Peptide sequence; Microbiology; Immunization; Biochemistry; Biology; Gene; Immunology; Bacteria","score_opus":0.012473354055612788,"score_gpt":0.26057139752583247,"score_spread":0.2480980434702197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963802750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99857014,0.00010695866,0.000030170626,0.000019493536,0.0004309944,0.00056286226,0.00006784779,0.00003751002,0.000174024],"genre_scores_gemma":[0.999056,0.00000716893,0.000115711315,0.0000036171755,0.00005640437,0.00013444875,0.00011352743,0.000019029934,0.0004941125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99909383,0.000019121377,0.0004198458,0.00024188998,0.000015945776,0.0002093538],"domain_scores_gemma":[0.9991805,0.000060286027,0.00026715492,0.00032660345,0.00014191741,0.000023536828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014794034,0.00016152959,0.00030449667,0.00004090037,0.00009383157,0.000012434014,0.00016722556,0.00020930408,0.00029254545],"category_scores_gemma":[0.00007351966,0.00014273665,0.00010832512,0.000101304955,0.00007748379,0.0000769993,0.000052933807,0.00014704141,0.0000067252863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016147633,0.0004846739,0.004700935,0.00010781223,0.0001992488,3.1290682e-7,0.0003603747,9.4175437e-7,0.99362,0.00007642519,0.00011774108,0.00017008508],"study_design_scores_gemma":[0.0021116014,0.00028880243,0.0041781766,0.00001519659,0.00012532753,0.00003398311,0.0006842942,0.000002072423,0.9912311,0.00014137273,0.0010452684,0.00014281823],"about_ca_topic_score_codex":0.00041031418,"about_ca_topic_score_gemma":0.00005598645,"teacher_disagreement_score":0.0023888864,"about_ca_system_score_codex":0.000008496027,"about_ca_system_score_gemma":0.000038770413,"threshold_uncertainty_score":0.58206314},"labels":[],"label_agreement":null},{"id":"W1964715079","doi":"10.1016/s0264-410x(01)00230-4","title":"Assessment of injection site reactions to an acellular pertussis-based combination vaccine, including novel use of skin tests with vaccine antigens","year":2001,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of British Columbia; BC Children's Hospital","funders":"","keywords":"Medicine; Local Reaction; Injection site; Erythema; Allergy; Atopy; Immunology; Surgery; Internal medicine","score_opus":0.0328820621286042,"score_gpt":0.2972000659842573,"score_spread":0.26431800385565307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964715079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98390055,0.00005074466,0.014489415,0.00041204202,0.00044006258,0.0005044205,0.000056253866,0.0000958893,0.000050603543],"genre_scores_gemma":[0.9970159,0.000042843214,0.0019654683,0.000059287704,0.00005958704,0.00002360073,0.000417959,0.00003751224,0.00037783632],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984865,0.00013078992,0.00064220594,0.000392489,0.00005102986,0.00029697517],"domain_scores_gemma":[0.998308,0.00016432536,0.0004158387,0.00051678886,0.00053953275,0.000055514265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029786085,0.0002717429,0.00050771376,0.0006365592,0.00024277922,0.000024753708,0.0001298596,0.00021154071,0.0004293993],"category_scores_gemma":[0.00009765026,0.00022597212,0.00008856865,0.0009757357,0.000007677719,0.00042481872,0.00006408275,0.00022236153,0.00001313449],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040297263,0.0011394413,0.2577483,0.000028672655,0.00011068806,8.210327e-7,0.00008774061,0.0013530584,0.7380555,0.00018040977,0.00021750158,0.0006748731],"study_design_scores_gemma":[0.00424731,0.0023843825,0.83365464,0.00012009358,0.00013697219,0.00010085055,0.000073917574,0.0007191828,0.14611608,0.0000070561746,0.012181856,0.00025766378],"about_ca_topic_score_codex":0.0024317417,"about_ca_topic_score_gemma":0.0015251634,"teacher_disagreement_score":0.59193945,"about_ca_system_score_codex":0.00008926715,"about_ca_system_score_gemma":0.00008482453,"threshold_uncertainty_score":0.92148757},"labels":[],"label_agreement":null},{"id":"W1965358192","doi":"10.1139/w03-074","title":"Characterization of<i>Neisseria meningitidis</i>strains isolated from invasive meningococcal disease cases in Canada in 2001","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Manitoba Beekeepers' Association; Health Canada; Manitoba Health","funders":"Health Canada","keywords":"Neisseria meningitidis; Meningococcal disease; Serotype; Outbreak; Neisseriaceae; Virology; Microbiology; Neisseria; Meningococcal vaccine; Biology; Antigen; clone (Java method); Antibiotics; Immunology; Bacteria; Genetics; Gene","score_opus":0.012101631816026569,"score_gpt":0.2005962215211129,"score_spread":0.1884945897050863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965358192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711293,0.000696985,0.000009077442,0.00015790244,0.0012520838,0.000118178745,0.0006179129,0.0000018867183,0.000033048735],"genre_scores_gemma":[0.99943954,0.000062768515,0.000014341677,0.00008403511,0.000025345991,0.0000031249451,0.00031569117,0.000011499073,0.000043672815],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984676,0.0003466117,0.0006308929,0.00015421836,0.000005398582,0.0003952485],"domain_scores_gemma":[0.9992127,0.00011198522,0.00031327133,0.00011508196,0.00011381896,0.00013317338],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016417765,0.00015389314,0.00041537665,0.0003631877,0.000054535958,0.000007721943,0.00014421552,0.00015981472,0.0013656293],"category_scores_gemma":[0.0002779795,0.00014944994,0.000056500787,0.00022872246,0.00008039564,0.000092966744,0.000008237559,0.00027242422,0.0000060410503],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077239085,0.00002160792,0.16709632,0.0000049294617,0.000050835206,0.00011700236,0.00015004257,0.000012843647,0.8320225,0.000038128957,0.00033526568,0.00007328983],"study_design_scores_gemma":[0.004482526,0.00042030396,0.63019705,0.00037592702,0.00009411178,0.0020998549,0.0008059527,0.0000020810667,0.3217908,0.000109730965,0.039057873,0.00056377595],"about_ca_topic_score_codex":0.8316254,"about_ca_topic_score_gemma":0.9939178,"teacher_disagreement_score":0.5102317,"about_ca_system_score_codex":0.00037784092,"about_ca_system_score_gemma":0.006310054,"threshold_uncertainty_score":0.99954724},"labels":[],"label_agreement":null},{"id":"W1965705014","doi":"10.1177/1753425913506950","title":"Complete <i>Bordetella avium, Bordetella hinzii</i> and <i>Bordetella trematum</i> lipid A structures and genomic sequence analyses of the loci involved in their modifications","year":2013,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Bordetella; Bordetella pertussis; Bordetella bronchiseptica; Microbiology; Pathogen; Biology; Virulence; Lipid A; Biochemistry; Bacteria; Gene; Genetics","score_opus":0.04876167117828868,"score_gpt":0.280358282204719,"score_spread":0.2315966110264303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965705014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545646,0.0028019638,0.000012219934,0.00042781985,0.00029317726,0.00050524663,0.00016749541,0.000038141654,0.0002974487],"genre_scores_gemma":[0.99841833,0.0011164681,0.0000764609,0.00014913091,0.000022195467,0.000037219714,0.00006133227,0.000021143816,0.000097717515],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99826205,0.0005369414,0.00055364403,0.00030037342,0.000025598072,0.00032137797],"domain_scores_gemma":[0.9985817,0.00028851506,0.00027961837,0.00066261034,0.00015504265,0.000032494223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024760189,0.0002910465,0.0004717019,0.0001682812,0.0003938556,0.00006583051,0.0003887517,0.00024494345,0.00015995241],"category_scores_gemma":[0.00008465726,0.00020153464,0.00009082362,0.00039212275,0.00063175464,0.00015933558,0.00031811674,0.00051657093,0.000014747694],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040118764,0.00006606176,0.009816577,0.000038349386,0.00009670395,1.3214662e-7,0.00078884786,0.00001952928,0.98625064,0.00022370517,0.0001620664,0.0024972733],"study_design_scores_gemma":[0.0020627026,0.00018934111,0.5231289,0.000099609024,0.000121468525,0.00007500368,0.0010641061,0.00023372282,0.4545411,0.0037727489,0.014121382,0.0005898784],"about_ca_topic_score_codex":0.011946063,"about_ca_topic_score_gemma":0.0009726576,"teacher_disagreement_score":0.53170955,"about_ca_system_score_codex":0.00003531471,"about_ca_system_score_gemma":0.00006122626,"threshold_uncertainty_score":0.9946335},"labels":[],"label_agreement":null},{"id":"W1965998310","doi":"10.1016/s0022-1759(00)00142-3","title":"Enzyme Linked Immunosorbent Assay (ELISA) for the detection of serum antibodies to the inner core lipopolysaccharide of Neisseria meningitidis Group B","year":2000,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Neisseria meningitidis; Antibody; Lipopolysaccharide; Monoclonal antibody; Epitope; Immunoglobulin M; Immunoglobulin G; Biology; Molecular biology; Immunology; Bacteria","score_opus":0.04519327195928008,"score_gpt":0.34502102429536724,"score_spread":0.29982775233608716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965998310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9663963,0.009706705,0.020295534,0.0009083588,0.0022161792,0.0003816372,0.000035452285,0.000017283148,0.00004256798],"genre_scores_gemma":[0.9907873,0.0015301188,0.0071523306,0.00006939638,0.00014916387,0.000024556337,0.0000026741513,0.0000149541,0.0002694941],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976115,0.0009156233,0.0010024335,0.00015369491,0.000035826113,0.00028090345],"domain_scores_gemma":[0.99657977,0.0019846633,0.00070289586,0.0003380616,0.00037548135,0.000019123185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028364775,0.00020510076,0.0006287708,0.00012761801,0.00031831342,0.000024008561,0.00050698,0.0002939647,0.00081954594],"category_scores_gemma":[0.0011154102,0.00009852517,0.00042305063,0.0002571776,0.00021909182,0.0001215925,0.00009535467,0.00050125323,0.0000079808915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010336207,0.00012102774,0.00022429103,0.000008979836,0.00048168955,1.941987e-7,0.00022882591,0.00003953172,0.78174734,0.00032323832,0.00005931992,0.2157319],"study_design_scores_gemma":[0.0011583345,0.0024624835,0.08976206,0.00008597386,0.0002716605,0.0002042539,0.00070083037,0.000019491043,0.8579037,0.0006548799,0.046617176,0.00015910603],"about_ca_topic_score_codex":0.00009682816,"about_ca_topic_score_gemma":0.0000138862215,"teacher_disagreement_score":0.2155728,"about_ca_system_score_codex":0.000032000313,"about_ca_system_score_gemma":0.00003139616,"threshold_uncertainty_score":0.89734536},"labels":[],"label_agreement":null},{"id":"W1966572047","doi":"10.1128/iai.01269-10","title":"ArcA-Regulated Glycosyltransferase Lic2B Promotes Complement Evasion and Pathogenesis of Nontypeable Haemophilus influenzae","year":2011,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Haemophilus influenzae; Microbiology; Immune system; Signal transduction; Pathogenesis; Gene; Glycosyltransferase; Innate immune system; Complement system; Immunology; Mutant; Cell biology; Genetics","score_opus":0.040087390017347034,"score_gpt":0.25241577105094026,"score_spread":0.21232838103359322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966572047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982207,0.00046762064,0.00008660132,0.000025473077,0.00031830536,0.00024012901,0.00003061215,0.000059793303,0.0005507709],"genre_scores_gemma":[0.9993476,0.00043998015,0.000041482952,0.00002168846,0.000011674792,0.000014073289,0.000045335986,0.000009466325,0.00006866855],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992249,0.00018727778,0.00027013052,0.0001504627,0.000012437802,0.00015477772],"domain_scores_gemma":[0.99955624,0.00003809091,0.00008118463,0.00018505959,0.00011388349,0.000025564153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022002113,0.00014169957,0.00022797936,0.00012548071,0.00029555595,0.000011656242,0.00004087643,0.00014563986,0.00081292744],"category_scores_gemma":[0.000030924173,0.00012144811,0.000046101337,0.00013057633,0.00012497543,0.00013099292,0.00006196429,0.00014192324,0.0000129510045],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024043689,0.0003263766,0.0664649,0.000056692737,0.000116825046,3.0977012e-7,0.0006343708,5.240256e-7,0.9188801,0.0004568461,0.000040879862,0.012781757],"study_design_scores_gemma":[0.0012813485,0.00061921286,0.6778221,0.00004718031,0.00006685495,0.000087755565,0.000055079363,0.0000066869975,0.31511617,0.0003498558,0.004400462,0.00014725905],"about_ca_topic_score_codex":0.007328946,"about_ca_topic_score_gemma":0.00039941492,"teacher_disagreement_score":0.6113572,"about_ca_system_score_codex":0.000012303789,"about_ca_system_score_gemma":0.000017601527,"threshold_uncertainty_score":0.99928135},"labels":[],"label_agreement":null},{"id":"W1966663000","doi":"10.1016/j.jinf.2010.11.009","title":"Epidemiology of Haemophilus influenzae bacteremia: A multi-national population-based assessment","year":2010,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Jubilee Hospital; Island Health; Université de Sherbrooke; University of Calgary","funders":"GlaxoSmithKline; Pfizer","keywords":"Bacteremia; Haemophilus influenzae; Epidemiology; Medicine; Microbiology; Population; Environmental health; Biology; Internal medicine; Antibiotics","score_opus":0.039167354571612516,"score_gpt":0.3491030854743575,"score_spread":0.30993573090274495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966663000","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99284405,0.000055062465,0.0029678727,0.00021691936,0.0037068776,0.000085293395,0.000011246355,0.000015401785,0.000097256685],"genre_scores_gemma":[0.99767995,0.000011537463,0.0019116693,0.000083098435,0.00022890176,0.0000040101663,0.00003699436,0.000008376521,0.000035466794],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987275,0.000229232,0.0007816836,0.00009879721,0.000027528764,0.00013526948],"domain_scores_gemma":[0.9978737,0.00037035503,0.0009591118,0.00010308519,0.00066968607,0.000024053712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010663343,0.00011171748,0.00035060092,0.0003212042,0.00010424657,0.000003672998,0.000063487045,0.00031137458,0.0006336877],"category_scores_gemma":[0.0008498385,0.0000899575,0.00019373141,0.0001369289,0.00004996713,0.00018946087,0.000015768283,0.00057797204,0.000014800288],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005747062,0.00021579255,0.76410407,0.000011824283,0.000084513085,2.0765765e-7,0.0000089946925,0.00037011795,0.23345307,0.0007324012,0.00020954195,0.0007520181],"study_design_scores_gemma":[0.0013895279,0.0002598118,0.98779416,0.000026510284,0.000041448377,0.00020308947,0.0000026105586,0.000068459696,0.0064175767,0.0003979699,0.0033194395,0.00007940098],"about_ca_topic_score_codex":0.00047946538,"about_ca_topic_score_gemma":0.00027560614,"teacher_disagreement_score":0.2270355,"about_ca_system_score_codex":0.00007378087,"about_ca_system_score_gemma":0.00017801493,"threshold_uncertainty_score":0.6938436},"labels":[],"label_agreement":null},{"id":"W1967374670","doi":"10.1111/j.1542-4758.2008.00305.x","title":"Fatal cerebritis and brain abscesses following a nontraumatic subdural hematoma in a chronic hemodialyzed patient","year":2008,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Hemodialysis; Bacteremia; Staphylococcus aureus; Hematoma; Surgery; Brain abscess; Arteriovenous fistula; Abscess; Antibiotics; Microbiology","score_opus":0.012076475921969948,"score_gpt":0.24247281939831972,"score_spread":0.23039634347634977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967374670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99694824,0.0006700339,0.00014054374,0.00048696937,0.000989922,0.00016304753,0.000034080134,0.000053151325,0.00051403546],"genre_scores_gemma":[0.9990653,0.000089508736,0.000103281534,0.00008793475,0.00009979559,0.000059471713,0.00018807265,0.000014334002,0.00029231774],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99888635,0.00009786507,0.0004139147,0.000304351,0.000044612738,0.00025289578],"domain_scores_gemma":[0.9995154,0.0001553742,0.0001073492,0.00014447681,0.00005192197,0.000025477008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012285043,0.00017271328,0.0003304396,0.00027272815,0.0001665507,0.00003742064,0.00013595114,0.00013366331,0.0009028564],"category_scores_gemma":[0.00011864867,0.0001688441,0.00015743982,0.00017182496,0.00008336729,0.00023706155,0.000090489964,0.00015397332,0.00009744642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035478896,0.0006997418,0.13675684,0.0000674985,0.0014639136,0.00016586344,0.0046843532,0.00010074249,0.8205344,0.0014024024,0.0044577625,0.029311702],"study_design_scores_gemma":[0.03581579,0.0010037316,0.5452583,0.00083113473,0.0003957851,0.007644255,0.0012613863,0.003363552,0.34343156,0.0017470601,0.05626207,0.0029854036],"about_ca_topic_score_codex":0.0007833938,"about_ca_topic_score_gemma":0.0009041116,"teacher_disagreement_score":0.47710282,"about_ca_system_score_codex":0.0001651735,"about_ca_system_score_gemma":0.000080059,"threshold_uncertainty_score":0.98856443},"labels":[],"label_agreement":null},{"id":"W1967658582","doi":"10.1038/nrd3194","title":"Meningococcal group A, C, Y and W-135 conjugate vaccine","year":2010,"lang":"en","type":"review","venue":"Nature Reviews Drug Discovery","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Innovative Medicines Canada","funders":"","keywords":"Conjugate; Conjugate vaccine; Meningococcal vaccine; Virology; Group (periodic table); Medicine; Chemistry; Immunogenicity; Mathematics; Immunology; Antibody; Immunization","score_opus":0.015454060123379012,"score_gpt":0.3057271016351348,"score_spread":0.29027304151175576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967658582","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001935056,0.9922899,0.000004962969,0.00006345642,0.005036196,0.0016539254,0.00020120529,0.00007846187,0.00047837142],"genre_scores_gemma":[0.000027803284,0.99314827,0.000039408278,0.00011655833,0.0006599623,0.0002815318,0.001229764,0.00007940728,0.0044172867],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99689966,0.00064941176,0.0011116053,0.00082929095,0.000024736531,0.00048529354],"domain_scores_gemma":[0.9981004,0.00029219498,0.00075427134,0.0007540143,0.00004376759,0.000055377153],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00072712364,0.000865223,0.003574522,0.00023105825,0.00025893736,0.00015399123,0.00040067654,0.0023649216,0.00045668907],"category_scores_gemma":[0.00019730239,0.00055000716,0.00086785824,0.00030996188,0.000092263144,0.00036798583,0.0002961095,0.003989052,0.00057603995],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015485268,0.000082026614,0.000009619335,0.0068973214,0.0002488206,0.0000024223643,0.000014879203,2.2371704e-9,0.00063104264,0.0015959283,0.022781512,0.9677209],"study_design_scores_gemma":[0.00042806414,0.000042048578,0.000011933086,0.0075495457,0.0012026854,0.00041283108,0.0000030245335,1.863662e-8,0.00002082256,0.000034484925,0.98971736,0.0005771955],"about_ca_topic_score_codex":0.000033036264,"about_ca_topic_score_gemma":0.00010381166,"teacher_disagreement_score":0.9671438,"about_ca_system_score_codex":0.000045903915,"about_ca_system_score_gemma":0.000093689494,"threshold_uncertainty_score":0.9996951},"labels":[],"label_agreement":null},{"id":"W1968380589","doi":"10.1371/journal.pone.0005854","title":"Tracing the Evolution of Competence in Haemophilus influenzae","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; National Institutes of Health; Killam Trusts","keywords":"Biology; Novelty; Haemophilus influenzae; Genetics; DNA; Human evolutionary genetics; Horizontal gene transfer; Gene; Competence (human resources); Evolutionary biology; Phylogenetics; Bacteria","score_opus":0.029310659389011118,"score_gpt":0.2323229789142835,"score_spread":0.20301231952527238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968380589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980241,0.0007329084,0.000017226537,0.00041222986,0.00007061532,0.000099666846,0.0000033953072,0.000018208824,0.00062164833],"genre_scores_gemma":[0.9997693,0.000017514327,0.00004228925,0.00004117003,0.000022232312,0.0000036897081,0.00000347781,0.000001988825,0.00009837535],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99961734,0.000053483338,0.0001499023,0.00007176908,0.000008570717,0.000098943],"domain_scores_gemma":[0.9997434,0.000042467836,0.000049643553,0.00012003556,0.000040819352,0.0000036353802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009293852,0.000047292546,0.0001248022,0.000052615702,0.00005621308,0.0000032607022,0.000071296396,0.00006411958,0.00008068371],"category_scores_gemma":[0.000050145652,0.000034077195,0.000020776652,0.00012763245,0.00003546086,0.000053074444,0.000011256664,0.00011276723,0.000039037182],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035832658,0.00043343843,0.009194012,0.000006349243,0.000028424949,1.2157619e-7,0.00014785834,0.0000076056376,0.9880157,0.0013998625,0.00002023841,0.0007105324],"study_design_scores_gemma":[0.00071009586,0.0002501604,0.64725167,0.00015075719,0.00004262548,0.000009068159,0.00012147748,0.000020075156,0.3499182,0.0012867277,0.0001522325,0.00008694087],"about_ca_topic_score_codex":0.000268731,"about_ca_topic_score_gemma":0.00008028606,"teacher_disagreement_score":0.6380975,"about_ca_system_score_codex":0.000027878992,"about_ca_system_score_gemma":0.000016025368,"threshold_uncertainty_score":0.13896276},"labels":[],"label_agreement":null},{"id":"W1968528072","doi":"10.1371/journal.pone.0027897","title":"Adverse Events following 12 and 18 Month Vaccinations: a Population-Based, Self-Controlled Case Series Analysis","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; Children's Hospital of Eastern Ontario; Institute for Clinical Evaluative Sciences; University of Toronto; Newborn Screening Ontario; Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research; Department of Family and Community Medicine, University of Toronto; University of Toronto; Ontario Ministry of Health and Long-Term Care; Institute for Clinical Evaluative Sciences","keywords":"Medicine; Vaccination; Incidence (geometry); Pediatrics; Population; Clinical endpoint; Relative risk; Emergency department; Adverse effect; Confidence interval; Emergency medicine; Randomized controlled trial; Internal medicine; Immunology; Environmental health","score_opus":0.0354569852429491,"score_gpt":0.22996999716831837,"score_spread":0.19451301192536927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968528072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988205,0.00023781395,0.000044598528,0.00004354146,0.00013842626,0.00033361898,0.000023477927,0.0001111561,0.0002468803],"genre_scores_gemma":[0.9980077,0.00002080375,0.0009581996,0.000022410113,0.000020689502,0.000095297255,0.000103287406,0.000010605349,0.0007609948],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992329,0.00012442932,0.00025967104,0.00020009962,0.000017335893,0.00016556012],"domain_scores_gemma":[0.9995354,0.00006922099,0.000107877466,0.00019190036,0.00007236533,0.00002322906],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013828884,0.00013243673,0.00040160606,0.00025958553,0.00030335344,0.0000075094304,0.000046659796,0.00012515066,0.001162577],"category_scores_gemma":[0.000086728985,0.00011773927,0.00016019304,0.00023001872,0.000005726381,0.00021186145,0.00002554886,0.00008489357,0.000036010235],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055485236,0.0018201096,0.9738559,0.000027404729,0.009404686,0.000029462166,0.0004525964,0.000007718879,0.013571258,0.00014642862,0.000020412479,0.000109136454],"study_design_scores_gemma":[0.02039909,0.00067647896,0.9429219,0.00010440949,0.020738762,0.00021189859,0.0005935063,0.0005563598,0.012442706,0.00042783536,0.00015155203,0.0007755316],"about_ca_topic_score_codex":0.0012603323,"about_ca_topic_score_gemma":0.0013783784,"teacher_disagreement_score":0.030934064,"about_ca_system_score_codex":0.000025735339,"about_ca_system_score_gemma":0.00001686642,"threshold_uncertainty_score":0.9997505},"labels":[],"label_agreement":null},{"id":"W1968579853","doi":"10.1186/1471-2334-14-48","title":"Bordetella pertussisin sporadic and outbreak settings in Alberta, Canada, July 2004 – December 2012","year":2014,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Alberta Health; University of Calgary; University of Alberta; Provincial Laboratory of Public Health","funders":"","keywords":"Outbreak; Bordetella pertussis; Medicine; Immunization; Population; Whooping cough; Pediatrics; Public health; Epidemiology; Demography; Vaccination; Internal medicine; Environmental health; Immunology; Virology; Biology; Pathology; Antibody","score_opus":0.004284969044604398,"score_gpt":0.2046864159966913,"score_spread":0.2004014469520869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968579853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938077,0.0015537355,0.000030834337,0.0002248214,0.0009929995,0.00019335284,0.00005217127,0.00006547583,0.0030789431],"genre_scores_gemma":[0.9970466,0.00004117365,0.0000064544993,0.0003251742,0.00010820445,0.000033063025,0.00007971391,0.000023347795,0.0023362786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99884266,0.00017168635,0.00026934742,0.00032237262,0.000020162443,0.0003737991],"domain_scores_gemma":[0.99927807,0.00027870634,0.00009443384,0.00022814344,0.000048968617,0.00007168191],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009450236,0.00022557685,0.00030484528,0.00012529176,0.00020881412,0.000036263424,0.00007291639,0.00015281803,0.00057727733],"category_scores_gemma":[0.00023094745,0.00020117508,0.00006274949,0.00014918462,0.00008065261,0.00014028809,0.000051737105,0.00014840758,0.00013134451],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001044435,0.00023434452,0.9375536,0.000066952955,0.00006697172,0.0000017196829,0.00008384535,0.00003062231,0.0019107056,0.0004153408,0.056005217,0.0035262466],"study_design_scores_gemma":[0.0017267995,0.00009658763,0.67241096,0.000042577303,0.00008293202,0.0001099936,0.000030083547,0.000015273838,0.00035259567,0.00022677938,0.32457733,0.00032806527],"about_ca_topic_score_codex":0.47627237,"about_ca_topic_score_gemma":0.90405357,"teacher_disagreement_score":0.42778122,"about_ca_system_score_codex":0.0000859272,"about_ca_system_score_gemma":0.00026892204,"threshold_uncertainty_score":0.8203682},"labels":[],"label_agreement":null},{"id":"W1968981551","doi":"10.1111/j.1574-6968.2001.tb10675.x","title":"Detection of the lst gene in different serogroups and LOS immunotypes of Neisseria meningitidis","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Office of International Science and Engineering; Health Canada","keywords":"Neisseria meningitidis; Neisseria; Microbiology; Neisseriaceae; Gene; Biology; Biovar; Bacteria; Genetics; Antibiotics","score_opus":0.0066990219133749055,"score_gpt":0.1994521271271878,"score_spread":0.1927531052138129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968981551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997705,0.00075623626,0.000037424525,0.00038851428,0.00088600925,0.0001677241,0.000030883275,0.000013500847,0.000014719085],"genre_scores_gemma":[0.9996858,0.00008970047,0.000009975999,0.00008311276,0.00002583115,0.00001052987,0.000032790664,0.00000909156,0.00005311596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914074,0.0001685401,0.0003091017,0.00017850437,0.000003898238,0.00019922768],"domain_scores_gemma":[0.9995457,0.00005875141,0.00016553164,0.00019920689,0.000024342484,0.0000064745477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090428184,0.00014156489,0.00028823153,0.000104822866,0.000074697986,0.0000037426555,0.00012297195,0.00018028593,0.00007871281],"category_scores_gemma":[0.00001615696,0.0000951825,0.0000751018,0.00013991958,0.00023870255,0.000038027796,0.0000853695,0.00016347191,0.0000052614414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012992937,0.000058867037,0.06383139,0.000009390589,0.00008167022,2.5783373e-7,0.00012100941,0.000003232846,0.93498194,0.000016276426,0.000065449545,0.00070059777],"study_design_scores_gemma":[0.000667544,0.000076809105,0.2701484,0.000023610903,0.00002155158,0.00014982597,0.0000339028,4.9219034e-7,0.72711676,0.000009265446,0.0016758275,0.000076019],"about_ca_topic_score_codex":0.00040437735,"about_ca_topic_score_gemma":0.00031764168,"teacher_disagreement_score":0.20786516,"about_ca_system_score_codex":0.00002076631,"about_ca_system_score_gemma":0.0000066732805,"threshold_uncertainty_score":0.38814297},"labels":[],"label_agreement":null},{"id":"W1969088100","doi":"10.1111/j.1365-2249.2006.03097.x","title":"Immunogenicity and protective efficacy of a recombinant filamentous haemagglutinin from <i>Bordetella pertussis</i>","year":2006,"lang":"en","type":"article","venue":"Clinical & Experimental Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Bordetella pertussis; Immunogenicity; Microbiology; Pertussis toxin; Filamentous haemagglutinin adhesin; Whooping cough; Biology; Antigen; Recombinant DNA; Virology; Vaccination; Immunology; G protein; Biochemistry; Receptor; Bacteria","score_opus":0.022249584299216644,"score_gpt":0.31063069323094156,"score_spread":0.2883811089317249,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969088100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804376,0.015478252,0.000026569889,0.00012033028,0.0028184375,0.00053011335,0.00004310402,0.000087135275,0.00045850387],"genre_scores_gemma":[0.9986584,0.00027313485,0.00015592355,0.000056346093,0.0000997201,0.00007294162,0.00013576423,0.00002804712,0.0005196983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972799,0.00057766575,0.0011080632,0.00060156715,0.000022740585,0.000410103],"domain_scores_gemma":[0.99835026,0.00067350146,0.00040926514,0.00045985437,0.00008047705,0.000026653655],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002818696,0.00030741512,0.0008329348,0.000084006984,0.00022772606,0.000019381945,0.00024343286,0.0005726304,0.0009237144],"category_scores_gemma":[0.00015929432,0.0002646874,0.0002719164,0.00012770077,0.0009399784,0.00009505217,0.00034026516,0.0004681797,0.00014484752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001404776,0.002061247,0.0037291364,0.000003434452,0.00041519824,0.000002791012,0.00016877103,3.0345382e-7,0.9855392,0.0004906774,0.0006939432,0.005490494],"study_design_scores_gemma":[0.0069793076,0.0021291722,0.19055209,0.000047916517,0.000084946696,0.00007498004,0.00035815392,0.000002256645,0.78566647,0.00048440654,0.013286319,0.000333976],"about_ca_topic_score_codex":0.004247684,"about_ca_topic_score_gemma":0.000046854424,"teacher_disagreement_score":0.19987275,"about_ca_system_score_codex":0.00004832176,"about_ca_system_score_gemma":0.000052733565,"threshold_uncertainty_score":0.99998957},"labels":[],"label_agreement":null},{"id":"W1969218547","doi":"10.1139/w02-077","title":"Bactericidal effect of gentamicin-induced membrane vesicles derived from<i>Pseudomonas aeruginosa</i>PAO1 on gram-positive bacteria","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Enterococcus hirae; Microbiology; Peptidoglycan; Listeria monocytogenes; Gentamicin; Pseudomonas aeruginosa; Autolysin; Bacteria; Biology; Bacillus subtilis; Staphylococcus aureus; Lysis; Chemistry; Biochemistry; Enzyme; Antibiotics; Enterococcus","score_opus":0.011469944941532343,"score_gpt":0.2064569930597287,"score_spread":0.19498704811819637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969218547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942517,0.00094818056,0.000008817362,0.00042791947,0.0034564664,0.00022175837,0.00046189746,0.000012817097,0.0002104039],"genre_scores_gemma":[0.99910367,0.000078449506,0.000045826742,0.00019972744,0.00025739524,0.0000035212213,0.00016506949,0.000030650153,0.000115705734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976961,0.0007057325,0.0007358387,0.00028619164,0.000013785979,0.0005623536],"domain_scores_gemma":[0.99840385,0.0003973475,0.00056849146,0.0002762752,0.00019130016,0.00016272246],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025431748,0.00035440756,0.00089490897,0.00043880538,0.00020262803,0.000024502056,0.000367618,0.00048133457,0.004000063],"category_scores_gemma":[0.000110924775,0.0002878133,0.00029443245,0.00017350794,0.00026468997,0.000111455105,0.000028421548,0.00050452113,0.00023617878],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037021405,0.000050436855,0.002832113,0.000011727295,0.0005031925,0.000037367477,0.000332708,0.0000025266822,0.99024713,0.000025322164,0.0017150745,0.003872214],"study_design_scores_gemma":[0.0027258547,0.0024227693,0.015285428,0.00010915752,0.0001677355,0.0011052901,0.00005232806,5.205752e-7,0.9667801,0.000009198182,0.01108327,0.00025833046],"about_ca_topic_score_codex":0.00592789,"about_ca_topic_score_gemma":0.00406524,"teacher_disagreement_score":0.023466986,"about_ca_system_score_codex":0.00013883266,"about_ca_system_score_gemma":0.00015728577,"threshold_uncertainty_score":0.9999574},"labels":[],"label_agreement":null},{"id":"W1969308586","doi":"10.1128/cvi.00414-13","title":"Randomized, Controlled, Multicenter Study of the Immunogenicity and Safety of a Fully Liquid Combination Diphtheria–Tetanus Toxoid–Five-Component Acellular Pertussis (DTaP<sub>5</sub>), Inactivated Poliovirus (IPV), and Haemophilus influenzae Type b (Hib) Vaccine Compared with a DTaP<sub>3</sub>-IPV/Hib Vaccine Administered at 3, 5, and 12 Months of Age","year":2013,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"FSD Pharma (Canada); Sanofi (Canada)","funders":"Sanofi Pasteur; University of Toronto; Sanofi; GlaxoSmithKline; Pfizer","keywords":"Diphtheria; Tetanus; Immunogenicity; Toxoid; Poliovirus; Inactivated Poliovirus Vaccine; Medicine; Diphtheria toxin; Virology; Corynebacterium diphtheriae; Pertactin; Microbiology; Vaccination; Immunology; Antibody; Toxin; Pertussis toxin; Biology; Virus","score_opus":0.017206353572147583,"score_gpt":0.2582360503422628,"score_spread":0.24102969677011524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969308586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98607874,0.0085927015,0.000010436647,0.0005858395,0.0005851234,0.004038308,0.000052197152,0.00004277562,0.000013882308],"genre_scores_gemma":[0.9946992,0.0048443326,0.0000154452,0.00008519795,0.000039832652,0.0001569046,0.00006287144,0.00004796675,0.000048252747],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99390084,0.0021177998,0.0026280256,0.0007682575,0.00008168754,0.0005034103],"domain_scores_gemma":[0.9950587,0.0018256699,0.0016738338,0.00074867386,0.00059192325,0.00010116924],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010497754,0.0006668328,0.0037383612,0.000276304,0.000379427,0.000033829005,0.00030248362,0.0005688051,0.00006695099],"category_scores_gemma":[0.0007035262,0.00041835548,0.0003064846,0.0003029499,0.0005729667,0.00022404715,0.0008022182,0.00061584846,0.000004936171],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.29600096,0.0018004734,0.034480244,0.00008101537,0.0030186395,0.00000398872,0.0006769001,0.000002451024,0.6623172,0.00002985224,0.000033212444,0.0015550248],"study_design_scores_gemma":[0.34147665,0.006295147,0.53245777,0.00018603167,0.0012387134,0.00016097995,0.00057677267,0.00007564824,0.116940945,0.00004654253,0.00014446996,0.00040034525],"about_ca_topic_score_codex":0.0011427202,"about_ca_topic_score_gemma":0.0007666117,"teacher_disagreement_score":0.5453763,"about_ca_system_score_codex":0.00004378549,"about_ca_system_score_gemma":0.00006719794,"threshold_uncertainty_score":0.99982685},"labels":[],"label_agreement":null},{"id":"W1969472712","doi":"10.1128/cvi.00049-07","title":"Epitope Specificities of the Group Y and W-135 Polysaccharides of<i>Neisseria meningitidis</i>","year":2007,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Baxter Healthcare Corporation","keywords":"Epitope; Neisseria meningitidis; Disaccharide; Antiserum; Antibody; Chemistry; Polysaccharide; Antigen; Biochemistry; Molecular biology; Biology; Bacteria; Immunology","score_opus":0.021243051099992364,"score_gpt":0.28702461929445555,"score_spread":0.2657815681944632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969472712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98935944,0.0074528684,0.000041240015,0.00036564242,0.0024389648,0.00013465458,0.000016363498,0.000020886264,0.00016991748],"genre_scores_gemma":[0.9972301,0.0022008428,0.000046976067,0.000047307385,0.0000960041,0.0000028766729,0.000006117314,0.000010015568,0.0003597607],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998521,0.00016840688,0.0008303397,0.0002333932,0.0000093618355,0.00023751461],"domain_scores_gemma":[0.99870676,0.0006450458,0.0002902686,0.00028288766,0.00005639567,0.000018616867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006246868,0.00015074089,0.0005258452,0.000076123695,0.00013696912,0.000006134946,0.00016576613,0.00027201735,0.00016910779],"category_scores_gemma":[0.00019648802,0.000097589305,0.0001215616,0.00013160426,0.0004863668,0.00006221548,0.00023506793,0.0002888579,0.000005827104],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005637208,0.00015160866,0.18552864,0.000019090357,0.00024202369,3.6475163e-7,0.00009986457,3.3574857e-8,0.7770213,0.006294848,0.00027766547,0.029800855],"study_design_scores_gemma":[0.0016430914,0.00060957944,0.88130367,0.000040145314,0.000073770374,0.00011414452,0.0003411011,3.0075853e-7,0.099196084,0.00096610794,0.015592243,0.00011974153],"about_ca_topic_score_codex":0.00020365663,"about_ca_topic_score_gemma":0.00009422485,"teacher_disagreement_score":0.69577503,"about_ca_system_score_codex":0.0000032997107,"about_ca_system_score_gemma":0.0000168524,"threshold_uncertainty_score":0.39795762},"labels":[],"label_agreement":null},{"id":"W1969606058","doi":"10.1038/mi.2012.12","title":"Neisseria gonorrhoeae selectively suppresses the development of Th1 and Th2 cells, and enhances Th17 cell responses, through TGF-β-dependent mechanisms","year":2012,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; University at Buffalo; National Institutes of Health; John R. Oishei Foundation; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs","keywords":"Neisseria gonorrhoeae; Immune system; Immunity; Acquired immune system; Immunology; Biology; Innate immune system; Microbiology; Pathogen; Transforming growth factor; Blockade; Cell biology; Receptor; Genetics","score_opus":0.014828484585710724,"score_gpt":0.24181972428490614,"score_spread":0.2269912396991954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969606058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98294216,0.013841263,0.00064489647,0.0001540704,0.0015943602,0.00027959005,0.000030492114,0.000051830768,0.00046134816],"genre_scores_gemma":[0.996975,0.0010005049,0.0010072731,0.000042736192,0.000039868177,0.000056252997,0.000023796938,0.000021549,0.0008330034],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839497,0.00040392132,0.0003997104,0.00028960948,0.000012922861,0.0004988948],"domain_scores_gemma":[0.999085,0.00033777647,0.00021158793,0.00026144437,0.000083036306,0.000021121949],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039200613,0.00026288198,0.00037177463,0.00008182984,0.00046212343,0.000025768166,0.00020773243,0.00031084623,0.00031287302],"category_scores_gemma":[0.00004329692,0.00018303581,0.000043172502,0.000116390445,0.0002755075,0.00023760469,0.0002842745,0.00029042424,0.00006184079],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041897537,0.00019168151,0.001080547,0.000023012853,0.00023353142,1.09195156e-7,0.0028823216,1.4408954e-7,0.9905389,0.0023999682,0.00016528867,0.0020655526],"study_design_scores_gemma":[0.0007802385,0.0002551242,0.041680977,0.000011637503,0.000062069834,0.00010179446,0.0012688563,2.747532e-7,0.9217808,0.0004253384,0.033428367,0.00020449352],"about_ca_topic_score_codex":0.00025702838,"about_ca_topic_score_gemma":0.00013641588,"teacher_disagreement_score":0.06875804,"about_ca_system_score_codex":0.000026442156,"about_ca_system_score_gemma":0.00009257043,"threshold_uncertainty_score":0.7463984},"labels":[],"label_agreement":null},{"id":"W1970200690","doi":"10.1016/j.ijmm.2010.04.020","title":"Identification and characterization of phage-displayed peptide mimetics of Neisseria meningitidis serogroup B capsular polysaccharide","year":2010,"lang":"en","type":"article","venue":"International Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada","keywords":"Neisseria meningitidis; Epitope; Microbiology; Biology; Virology; Monoclonal antibody; Antibody; Phage display; Meningococcal vaccine; Epitope mapping; Bacteria; Immunology","score_opus":0.006429201800668498,"score_gpt":0.2616428208831687,"score_spread":0.25521361908250023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970200690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99339414,0.00019255848,0.0008804026,0.0011622147,0.004194281,0.000065219254,0.000096622585,0.0000062443464,0.000008292508],"genre_scores_gemma":[0.9991649,0.00028826375,0.00011146608,0.000047078574,0.0001873962,0.0000016547432,0.00011364187,0.000009044155,0.00007655456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869585,0.000116081304,0.00088965247,0.00012761417,0.000045636105,0.00012518645],"domain_scores_gemma":[0.9982905,0.000121329875,0.0008936258,0.00010857766,0.00054673513,0.000039263803],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006523962,0.00011268958,0.00033089108,0.0002424733,0.000033414763,0.00001234241,0.0003874666,0.00033795694,0.0010143013],"category_scores_gemma":[0.0003662514,0.000093507755,0.00010012808,0.000077963756,0.00026402686,0.00012861277,0.000089285924,0.0003601823,0.000008111764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016957852,0.0001588666,0.0028683404,0.000012529872,0.000326322,0.000002742767,0.00015832049,2.3075965e-7,0.9919826,0.0008811898,0.00012435437,0.0033149216],"study_design_scores_gemma":[0.0014605706,0.00019951489,0.02645075,0.000073572264,0.000072336516,0.001853987,0.000056949393,0.000009586453,0.9633938,0.000102571415,0.0062376084,0.000088772744],"about_ca_topic_score_codex":0.00007980138,"about_ca_topic_score_gemma":0.000029238927,"teacher_disagreement_score":0.028588822,"about_ca_system_score_codex":0.00001261952,"about_ca_system_score_gemma":0.00009058902,"threshold_uncertainty_score":0.9998989},"labels":[],"label_agreement":null},{"id":"W1970558005","doi":"10.4161/hv.23888","title":"Cost-effectiveness of vaccination against meningococcal B among Dutch infants","year":2013,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Vaccination; Meningococcal disease; Incidence (geometry); Pediatrics; Cost effectiveness; Cohort; Disease; Disease burden; Vaccination schedule; Environmental health; Immunology; Immunization; Neisseria meningitidis; Internal medicine; Antibody","score_opus":0.03650809366419492,"score_gpt":0.3035142702573974,"score_spread":0.26700617659320247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970558005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954972,0.0009592804,0.00021891792,0.000030713527,0.0008882145,0.0011893277,0.000014201884,0.00014262443,0.00105951],"genre_scores_gemma":[0.99849844,0.000118304095,0.00003797422,0.000047733545,0.000064285974,0.0002496867,0.00016944941,0.000053566455,0.0007605571],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982243,0.00037825268,0.00062448013,0.00032407884,0.00003361247,0.00041528238],"domain_scores_gemma":[0.99851453,0.00022812863,0.00032686186,0.0005063523,0.00039859358,0.000025558014],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037675153,0.0003274763,0.00051553414,0.00024659486,0.00032992917,0.000057866444,0.0003082664,0.0003498531,0.0029195803],"category_scores_gemma":[0.000030685547,0.00028983908,0.0001678862,0.00028230096,0.000064339474,0.00036563832,0.00009772136,0.00029209413,0.00025040118],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012797513,0.00025816626,0.08057087,0.000062012565,0.0003618128,2.1596155e-7,0.00028580753,0.000016813314,0.9023879,0.0006710455,0.00022311593,0.015034226],"study_design_scores_gemma":[0.0029703649,0.0002220186,0.74908024,0.00008370979,0.00006454003,0.000010783993,0.00010088107,0.000017468541,0.23933929,0.00032994736,0.0074770018,0.00030373243],"about_ca_topic_score_codex":0.000613911,"about_ca_topic_score_gemma":0.000056670255,"teacher_disagreement_score":0.66850936,"about_ca_system_score_codex":0.00006662794,"about_ca_system_score_gemma":0.000032379343,"threshold_uncertainty_score":0.99995536},"labels":[],"label_agreement":null},{"id":"W1970673148","doi":"10.1503/cmaj.050379","title":"Changing epidemiology and emerging risk groups for pertussis","year":2006,"lang":"en","type":"review","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Dalhousie University","funders":"","keywords":"Pneumonia; Medicine; Epidemiology; Pertussis vaccine; Whooping cough; Vaccination; Encephalopathy; Bordetella pertussis; Intensive care medicine; Pediatrics; Immunology; Psychiatry; Pathology; Internal medicine; Immunization; Biology; Antibody","score_opus":0.02389089687430078,"score_gpt":0.3025569211659844,"score_spread":0.27866602429168363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970673148","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019725996,0.9937463,0.00023917748,0.0013680593,0.0037754448,0.00023138503,0.00026523435,0.000018415936,0.00015876083],"genre_scores_gemma":[0.00004470304,0.9958497,0.000041320396,0.00042268206,0.0022375684,0.00004650108,0.0002530878,0.000028942755,0.0010754897],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99720377,0.0009191229,0.0008295807,0.0002382015,0.00003448823,0.0007748148],"domain_scores_gemma":[0.99713844,0.0015080824,0.00083850184,0.00008710823,0.00014797131,0.0002798896],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0038071172,0.0002437583,0.001213626,0.000529262,0.00090108014,0.000035682922,0.0001548428,0.0016330369,0.0013951361],"category_scores_gemma":[0.004308091,0.0001915413,0.0003940617,0.00018584124,0.00004076045,0.00005827712,0.000025083264,0.0013274923,0.00008111648],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000012235683,0.0000073668903,0.00052886165,0.00020891592,0.0004036818,0.000003951995,0.00003306887,7.295456e-8,2.202736e-7,0.00020904288,0.051272027,0.94733155],"study_design_scores_gemma":[0.000349872,0.00003440215,0.0001268405,0.00075917883,0.0004376554,0.0009191797,0.000041908737,0.0000028658742,9.381836e-8,0.00012452378,0.9970126,0.000190836],"about_ca_topic_score_codex":0.0023242997,"about_ca_topic_score_gemma":0.009338053,"teacher_disagreement_score":0.94714075,"about_ca_system_score_codex":0.00053031335,"about_ca_system_score_gemma":0.0010623902,"threshold_uncertainty_score":0.99966305},"labels":[],"label_agreement":null},{"id":"W1970913116","doi":"10.1016/s0264-410x(02)00161-5","title":"Economic analysis of the 1992–1993 mass immunization campaign against serogroup C meningococcal disease in Quebec","year":2002,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Santé Montérégie; Institut National de Santé Publique du Québec; Université de Sherbrooke","funders":"","keywords":"Meningococcal disease; Medicine; Environmental health; Immunization; Quality-adjusted life year; Population; Outbreak; Disease burden; Public health; Demography; Cost effectiveness; Cohort; Neisseria meningitidis; Virology; Immunology; Biology","score_opus":0.008474154899532472,"score_gpt":0.21419544793736356,"score_spread":0.2057212930378311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970913116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982974,0.00055118225,0.000037672657,0.00037848076,0.00036442452,0.00015056215,0.000047646776,0.000025377918,0.00014728609],"genre_scores_gemma":[0.9985004,0.00011464452,0.000008306663,0.000037274844,0.000028830651,0.000010092434,0.00015446746,0.000009480942,0.0011365226],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999189,0.0001443534,0.0003235094,0.00017053747,0.000008452611,0.00016413564],"domain_scores_gemma":[0.9994267,0.00004742052,0.00013429201,0.0003534271,0.000021523243,0.00001662241],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000989378,0.0001173624,0.00027197515,0.0002487572,0.000092558745,0.000012069802,0.00016253241,0.00009584809,0.0016686269],"category_scores_gemma":[0.000024308974,0.00008609189,0.00014449724,0.0005459433,0.000013780762,0.000095492585,0.00005491432,0.00011076809,0.00006429112],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009507043,0.00016463178,0.85032785,0.000008893481,0.0006207519,4.7766025e-7,0.0002742051,0.004273195,0.14121419,0.00038819687,0.0007578536,0.0018746883],"study_design_scores_gemma":[0.0013352076,0.000033336048,0.9796634,0.000020605868,0.00042925918,8.066982e-7,0.00007179363,0.0029075476,0.0058793565,0.000018215931,0.009480758,0.00015974004],"about_ca_topic_score_codex":0.011200787,"about_ca_topic_score_gemma":0.023029612,"teacher_disagreement_score":0.13533483,"about_ca_system_score_codex":0.00007112493,"about_ca_system_score_gemma":0.000016178015,"threshold_uncertainty_score":0.999244},"labels":[],"label_agreement":null},{"id":"W1971211783","doi":"10.1517/14712598.2015.993375","title":"Glycoconjugate vaccines: an update","year":2014,"lang":"en","type":"review","venue":"Expert Opinion on Biological Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child, Adolescent and Family Mental Health","funders":"","keywords":"Glycoconjugate; Vaccination; Neisseria meningitidis; Medicine; Meningococcal vaccine; Streptococcus pneumoniae; Haemophilus influenzae; Immunology; Virology; Immunization; Intensive care medicine; Biology; Microbiology; Antibiotics; Immune system; Bacteria; Bioinformatics","score_opus":0.12243014228357499,"score_gpt":0.3900100634619948,"score_spread":0.2675799211784198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971211783","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016884794,0.9921613,0.000022549653,0.00011870388,0.006092292,0.0007363901,0.000055586883,0.0003277855,0.0003165767],"genre_scores_gemma":[0.00007366089,0.9951018,0.000028641938,0.00074388535,0.001261746,0.00034792777,0.0022906533,0.000058005495,0.00009368574],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99659634,0.0012795082,0.00074408745,0.0008671373,0.000019828114,0.0004931024],"domain_scores_gemma":[0.9984981,0.00026565988,0.00035939514,0.00075574307,0.00005659086,0.0000645572],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003300674,0.00074506033,0.0019824863,0.00017852947,0.0002879066,0.000057145528,0.0005848969,0.0015190009,0.0049112756],"category_scores_gemma":[0.00004557311,0.00040954936,0.0006388396,0.00019653236,0.000102726386,0.00007424073,0.0000813896,0.00058768207,0.0032646758],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015444557,0.0003050477,0.0000019836498,0.000028793691,0.00021433619,3.837335e-7,0.00001548372,4.258333e-8,0.00073619373,0.0017299112,0.005620498,0.9911929],"study_design_scores_gemma":[0.000808521,0.0017417262,0.000010554253,0.00065499754,0.0000019048539,0.000059896123,0.0000058677506,1.2511009e-7,0.00010533977,0.0001039086,0.9959377,0.00056943815],"about_ca_topic_score_codex":0.000024193741,"about_ca_topic_score_gemma":8.508195e-7,"teacher_disagreement_score":0.9906234,"about_ca_system_score_codex":0.000041900774,"about_ca_system_score_gemma":0.000044631553,"threshold_uncertainty_score":0.9998356},"labels":[],"label_agreement":null},{"id":"W1971610475","doi":"10.1586/14760584.2015.979799","title":"Evolving meningococcal immunization strategies","year":2014,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Meningococcal disease; Immunization; Medicine; Meningococcal vaccine; Conjugate vaccine; Vaccination; Meningitis; Public health; Epidemiology; Incidence (geometry); Neisseria meningitidis; Disease; Disease burden; Virology; Immunology; Environmental health; Pediatrics; Population; Antigen; Biology","score_opus":0.025238222240149353,"score_gpt":0.35414158813263585,"score_spread":0.3289033658924865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971610475","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000026979724,0.99601585,0.00014464758,0.000043063526,0.0018175123,0.00074609596,0.00001622455,0.0000918442,0.0011220784],"genre_scores_gemma":[0.000012073014,0.99806124,0.00012144793,0.000048649297,0.00035647192,0.00018776568,0.0007088598,0.00005767519,0.00044578977],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99739224,0.0005783088,0.0013561152,0.0003725181,0.000023325378,0.00027748375],"domain_scores_gemma":[0.997858,0.0002420185,0.00094153907,0.0006772521,0.00026083397,0.000020384123],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004207291,0.0005243418,0.0030629898,0.00019707494,0.00013954165,0.000033711935,0.00044100764,0.00045239268,0.0032203607],"category_scores_gemma":[0.00028071983,0.0003585838,0.0007229152,0.00038389972,0.0000379518,0.00019402971,0.00015259745,0.00030980038,0.00031638084],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000030578033,0.000065250584,0.0000016159925,0.10800169,0.0003522549,2.3311576e-7,0.000033469463,4.037678e-8,0.0005650126,0.0007214299,0.032155868,0.85810006],"study_design_scores_gemma":[0.0001421676,0.00007095427,0.0000036677804,0.12976448,0.00037789607,0.000085116204,0.00001464072,1.350838e-7,0.000047372374,0.000009458382,0.8691897,0.0002944142],"about_ca_topic_score_codex":0.00009230392,"about_ca_topic_score_gemma":0.000005098177,"teacher_disagreement_score":0.85780567,"about_ca_system_score_codex":0.00003740708,"about_ca_system_score_gemma":0.00018515013,"threshold_uncertainty_score":0.99988663},"labels":[],"label_agreement":null},{"id":"W1972087373","doi":"10.1016/s0264-410x(01)00269-9","title":"Antibodies to BrkA augment killing of Bordetella pertussis","year":2001,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia","keywords":"Bordetella pertussis; Pertactin; Microbiology; Whooping cough; Pertussis toxin; Polyclonal antibodies; Virulence; Virulence factor; Biology; Antibody; Fusion protein; Filamentous haemagglutinin adhesin; Recombinant DNA; Virology; Bordetella; Bacteria; G protein; Immunology; Vaccination; Gene; Biochemistry; Genetics; Receptor","score_opus":0.01415243585488151,"score_gpt":0.2596544307207316,"score_spread":0.24550199486585006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972087373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99586964,0.0012092766,0.00024775203,0.0008173073,0.00083415455,0.00011666419,0.000010356263,0.000047923444,0.0008469029],"genre_scores_gemma":[0.9958227,0.000664996,0.00015185254,0.00008524819,0.00007718611,0.00000420193,0.000021397493,0.000010339443,0.0031620518],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993725,0.00003232146,0.00023218979,0.00015830324,0.000009001213,0.00019569292],"domain_scores_gemma":[0.999612,0.000041879437,0.00005652076,0.00019403864,0.00007689659,0.000018684275],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008448188,0.000108955646,0.00022823775,0.00012508521,0.000094932024,0.0000066893194,0.00008824016,0.000085220614,0.0021423602],"category_scores_gemma":[0.000033026878,0.0000855847,0.00006145673,0.00018386552,0.0000054261227,0.000040155468,0.000058288588,0.00006575252,0.00027337295],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015840659,0.00011701837,0.046903618,0.000010639534,0.00009703281,8.657109e-7,0.00018644298,0.000014439427,0.92884386,0.00014788767,0.005565041,0.017954752],"study_design_scores_gemma":[0.0010327178,0.00036298198,0.090128355,0.000050544877,0.00004653047,0.0000649088,0.00015251995,0.0000047805165,0.2940741,0.00004096996,0.6138574,0.00018420341],"about_ca_topic_score_codex":0.00034501342,"about_ca_topic_score_gemma":0.000077937955,"teacher_disagreement_score":0.63476974,"about_ca_system_score_codex":0.000012483333,"about_ca_system_score_gemma":0.000010794907,"threshold_uncertainty_score":0.9987698},"labels":[],"label_agreement":null},{"id":"W1972688239","doi":"10.1016/j.ijid.2010.02.1860","title":"Adolescent and adult Pertussis vaccination programs: Are they having an impact?","year":2010,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Vaccination; Herd immunity; Pediatrics; Disease; Booster dose; Developed country; Young adult; Disease burden; Environmental health; Immunology; Immunization; Gerontology; Population; Immune system; Internal medicine","score_opus":0.00951783406643546,"score_gpt":0.28636187249913186,"score_spread":0.2768440384326964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972688239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996489,0.0002468951,0.00006589657,0.0002634996,0.0027029384,0.000085075226,0.000034766086,0.000042410255,0.00006955524],"genre_scores_gemma":[0.99917096,0.00015683318,0.00001780795,0.00007393101,0.0004967981,0.0000061402943,0.00004096043,0.000012498692,0.000024070687],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993172,0.000073465286,0.00030393136,0.00012551616,0.00004664578,0.00013322716],"domain_scores_gemma":[0.9984101,0.00004283009,0.00038209354,0.000096168675,0.0010027889,0.00006598756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010525928,0.00013376748,0.00017506766,0.0002317369,0.00012166795,0.00013789695,0.00016074647,0.00010610344,0.00040939925],"category_scores_gemma":[0.00026064538,0.000098357465,0.00014138095,0.000047074787,0.000034321696,0.00048983603,0.00004163068,0.0002845395,0.0000117068685],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019130493,0.0009163014,0.8756519,0.000007710467,0.00031459698,0.0000069823723,0.00016724669,0.000006720243,0.06285149,0.00027842252,0.0003349672,0.05927239],"study_design_scores_gemma":[0.0015098702,0.00040441225,0.9928324,0.00006420706,0.00009093468,0.0012414248,0.00018017224,0.000013174246,0.0014761904,0.00052299054,0.0015261098,0.00013810657],"about_ca_topic_score_codex":0.00017383309,"about_ca_topic_score_gemma":0.00036688332,"teacher_disagreement_score":0.11718053,"about_ca_system_score_codex":0.00005829272,"about_ca_system_score_gemma":0.000062521554,"threshold_uncertainty_score":0.44826344},"labels":[],"label_agreement":null},{"id":"W1972779847","doi":"10.1097/inf.0b013e31812f4f5b","title":"Invasive Infections Caused by Haemophilus influenzae Serotypes in Twelve Canadian IMPACT Centers, 1996–2001","year":2007,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; Dalhousie University; University of British Columbia; University of Alberta; University of Saskatchewan","funders":"","keywords":"Serotype; Haemophilus influenzae; Case fatality rate; Meningitis; Epidemiology; Epiglottitis; Medicine; Pneumonia; Pediatrics; Virology; Microbiology; Biology; Antibiotics; Internal medicine","score_opus":0.009558154756301607,"score_gpt":0.25276301847682126,"score_spread":0.24320486372051964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972779847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99401474,0.0016788282,0.000040037205,0.0004035209,0.0025769982,0.0003970202,0.00018588014,0.00007648063,0.0006265002],"genre_scores_gemma":[0.9974971,0.0010251399,0.0000012458408,0.00033390423,0.00084815855,0.000018349689,0.00006117728,0.00003506673,0.00017986663],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997777,0.000313928,0.0005805945,0.00025217293,0.000050232837,0.0010260758],"domain_scores_gemma":[0.9984843,0.00034274804,0.00027744714,0.00029600042,0.00019087501,0.00040860116],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00082564977,0.00033162246,0.0003112137,0.0009054904,0.0011065719,0.00012158852,0.00024346079,0.0002491201,0.0012362192],"category_scores_gemma":[0.0004257385,0.00024239806,0.0002724253,0.00087089365,0.00009427353,0.0003069719,0.00005797303,0.0010182683,0.00031811566],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011224501,0.0002987034,0.9735588,0.0000096170825,0.00017779524,0.00003682674,0.00020711063,0.00018455084,0.002347518,0.00002186557,0.022764692,0.0002802882],"study_design_scores_gemma":[0.0022737947,0.00029352884,0.98820645,0.000017982495,0.00028464515,0.0008605972,0.00009361436,0.000002465564,0.00017182225,0.0004596611,0.006967382,0.00036804035],"about_ca_topic_score_codex":0.09543564,"about_ca_topic_score_gemma":0.19766772,"teacher_disagreement_score":0.10223208,"about_ca_system_score_codex":0.0007483517,"about_ca_system_score_gemma":0.0010744757,"threshold_uncertainty_score":0.99967676},"labels":[],"label_agreement":null},{"id":"W1972823088","doi":"10.1016/j.vaccine.2011.11.035","title":"Immune responses in adults to revaccination with a tetanus toxoid, reduced diphtheria toxoid, and acellular pertussis vaccine 10 years after a previous dose","year":2011,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Q & T Research; Riverview Hospital; McGill University Health Centre; Dalhousie University; British Columbia Children's Hospital; Capital District Health Authority; Institut National de Santé Publique du Québec; Izaak Walton Killam Health Centre","funders":"","keywords":"Medicine; Tetanus; Diphtheria; Toxoid; Adverse effect; myalgia; Pertussis vaccine; Immunogenicity; Pediatrics; Diphtheria toxin; Vaccination; Booster dose; Immunology; Internal medicine; Immunization; Antibody","score_opus":0.0100641712730409,"score_gpt":0.22160743333774247,"score_spread":0.21154326206470156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972823088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939516,0.0041455394,0.000012046839,0.00041144685,0.00031842873,0.00084463606,0.000024773815,0.000099209945,0.00019230803],"genre_scores_gemma":[0.9942445,0.00040165216,0.00032754574,0.000077513534,0.00006291577,0.00017605278,0.00004346682,0.000049874885,0.0046164594],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981905,0.000248476,0.0005200357,0.00057048775,0.00003064146,0.0004398376],"domain_scores_gemma":[0.99902964,0.00007466448,0.00014933446,0.00054759043,0.0001324889,0.000066267974],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033678906,0.00033860508,0.00052212074,0.00036941454,0.00011955503,0.000037000726,0.00018126357,0.0002559667,0.003676325],"category_scores_gemma":[0.00015956249,0.00026656417,0.000067990004,0.0005056171,0.00001107281,0.00022317116,0.00014566281,0.00023537519,0.00019829399],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.056915022,0.0008975158,0.053592343,0.000117202835,0.0003272513,0.00009212263,0.005384359,0.0000015317111,0.8458151,0.000044833323,0.001689384,0.03512329],"study_design_scores_gemma":[0.0073955404,0.0019917535,0.93002963,0.00033285073,0.000098259385,0.0002793896,0.00024188666,0.0000026864611,0.04656435,0.00003208027,0.012561736,0.00046985713],"about_ca_topic_score_codex":0.0012027009,"about_ca_topic_score_gemma":0.0010136195,"teacher_disagreement_score":0.87643725,"about_ca_system_score_codex":0.000059808575,"about_ca_system_score_gemma":0.000043647837,"threshold_uncertainty_score":0.99997866},"labels":[],"label_agreement":null},{"id":"W1972994475","doi":"10.1371/journal.pone.0116024","title":"Progressive Decrease in the Potential Usefulness of Meningococcal Serogroup B Vaccine (4CMenB, Bexsero®) in Gipuzkoa, Northern Spain","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Euskal Herriko Unibertsitatea","keywords":"Immunogenicity; Neisseria meningitidis; Virology; Meningococcal vaccine; Meningococcal disease; Biology; Antigen; Typing; Microbiology; Medicine; Immunology; Genetics; Bacteria","score_opus":0.021343698366267684,"score_gpt":0.22091193825015326,"score_spread":0.19956823988388558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972994475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99866056,0.00022778334,0.00003344667,0.00038593286,0.00011240769,0.00044631102,0.000011989289,0.000027774266,0.00009379128],"genre_scores_gemma":[0.9995066,0.0000098067,0.000069786154,0.00004568661,0.00008167783,0.0001377689,0.000072227565,0.000015500429,0.00006093064],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984979,0.00057706673,0.00037045227,0.00022828601,0.000033405675,0.00029287668],"domain_scores_gemma":[0.9992929,0.00015912726,0.00014620881,0.00029409883,0.00008604704,0.000021589924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006146548,0.00015944449,0.00036348077,0.00014337279,0.00007732763,0.00001529221,0.00023400468,0.0001808636,0.00038755464],"category_scores_gemma":[0.0002222292,0.00011558564,0.000056290195,0.00025545002,0.000050820057,0.000089285204,0.000069752095,0.00027676125,0.000050317045],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073790766,0.0056542563,0.2804527,0.00007872441,0.0002885697,0.00001263367,0.0011991054,0.000015909833,0.7070815,0.00043527773,0.000043409273,0.0040000207],"study_design_scores_gemma":[0.009874174,0.0013612191,0.76353097,0.000579451,0.00033290742,0.00011059814,0.0010482185,0.00024047024,0.2210583,0.00062137604,0.00064858265,0.0005937339],"about_ca_topic_score_codex":0.0007267296,"about_ca_topic_score_gemma":0.0017840575,"teacher_disagreement_score":0.4860232,"about_ca_system_score_codex":0.000021988477,"about_ca_system_score_gemma":0.000029026238,"threshold_uncertainty_score":0.47134453},"labels":[],"label_agreement":null},{"id":"W1974686143","doi":"10.1128/jcm.41.8.3851-3853.2003","title":"Evaluation of a Rapid PCR Assay for Diagnosis of Meningococcal Meningitis","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Meningitis; Meningococcal meningitis; Gram staining; Microbiology; Neisseria meningitidis; Cerebrospinal fluid; Polymerase chain reaction; Bacterial meningitis; Virology; Biology; Meningococcal Infections; Medicine; Bacteria; Meningococcal disease; Pathology; Antibiotics; Gene; Genetics; Pediatrics","score_opus":0.10250436172530833,"score_gpt":0.3945886344337652,"score_spread":0.2920842727084568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974686143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929348,0.0024410964,0.000490603,0.0001792925,0.003331469,0.0002721536,0.0000703899,0.0000045041015,0.000275653],"genre_scores_gemma":[0.9984201,0.00033295213,0.000985438,0.000029270584,0.00013004204,0.000017767703,0.00001958932,0.000011005584,0.00005381644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99544203,0.002106446,0.0020581575,0.00016419853,0.000021654714,0.00020752726],"domain_scores_gemma":[0.9938263,0.0025372524,0.0018257347,0.0001648757,0.0016177476,0.000028044657],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.010197043,0.00013273171,0.0009619003,0.00015943598,0.000050956205,0.000003498932,0.0001667128,0.00048677067,0.0013331561],"category_scores_gemma":[0.0071525862,0.00010122705,0.00055085914,0.00011186086,0.00023176723,0.000066094486,0.000026702204,0.00029136252,0.000008243497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054711744,0.000705295,0.023959603,0.000022707914,0.0010671801,2.5738314e-7,0.00006885492,0.000013692499,0.9286451,0.0007472653,0.0067238263,0.037499152],"study_design_scores_gemma":[0.013065683,0.006552364,0.011530622,0.00014923603,0.0014940221,0.00055939215,0.000120431294,0.000005928444,0.6981445,0.0016641854,0.2664843,0.00022937411],"about_ca_topic_score_codex":0.000009461699,"about_ca_topic_score_gemma":0.000009494027,"teacher_disagreement_score":0.25976047,"about_ca_system_score_codex":0.000024303774,"about_ca_system_score_gemma":0.0003024635,"threshold_uncertainty_score":0.9995798},"labels":[],"label_agreement":null},{"id":"W1974777405","doi":"10.1371/journal.pone.0056705","title":"Association of Neisseria gonorrhoeae OpaCEA with Dendritic Cells Suppresses Their Ability to Elicit an HIV-1-Specific T Cell Memory Response","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Research Resources; Canadian Institutes of Health Research; School of Medicine, Indiana University; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Ontario HIV Treatment Network; Bill and Melinda Gates Foundation","keywords":"Neisseria gonorrhoeae; Immune system; Biology; Immunology; Antigen; Cytotoxic T cell; T cell; Epitope; Virology; Microbiology; In vitro","score_opus":0.017081375482687438,"score_gpt":0.20172772438886483,"score_spread":0.1846463489061774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974777405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981667,0.00012853013,0.0000140097345,0.0004885961,0.00020127831,0.0005503521,0.000113387934,0.000070780836,0.00026640503],"genre_scores_gemma":[0.99617946,0.00003359527,0.00027196703,0.0000420289,0.000052055708,0.00008222364,0.00005754273,0.00002215386,0.003258963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870735,0.00042885478,0.0002811817,0.00028074245,0.000016210583,0.00028567543],"domain_scores_gemma":[0.99866956,0.00035258572,0.00014305563,0.00043573862,0.00035434408,0.00004468439],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029145577,0.00016808932,0.0003454727,0.00009658908,0.000113042624,0.000036874608,0.00015927396,0.00018884153,0.002974447],"category_scores_gemma":[0.00008445794,0.00013681813,0.000044032793,0.0001272885,0.00004003227,0.00022054632,0.000046508765,0.00016004857,0.0007621574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072119624,0.0015464657,0.008350392,0.000045866753,0.00012092465,6.83394e-8,0.0004616544,0.000006998139,0.987117,0.00000785851,0.0015381702,0.00008338677],"study_design_scores_gemma":[0.000691151,0.000637919,0.08458739,0.000040685478,0.00006551982,0.0000018442587,0.0003478823,0.0000023205764,0.91166633,0.000017869368,0.0017768058,0.0001643085],"about_ca_topic_score_codex":0.00023657132,"about_ca_topic_score_gemma":0.00008940517,"teacher_disagreement_score":0.076237,"about_ca_system_score_codex":0.00007299201,"about_ca_system_score_gemma":0.00003902602,"threshold_uncertainty_score":0.99793696},"labels":[],"label_agreement":null},{"id":"W1975352281","doi":"10.1111/j.1708-8305.2010.00449.x","title":"The Risk of Meningococcal Disease in Travelers and Current Recommendations for Prevention","year":2010,"lang":"en","type":"article","venue":"Journal of Travel Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meningococcal disease; Travel medicine; Meningococcal vaccine; Intensive care medicine; Environmental health; Neisseria meningitidis; Immunology; Immunization; Psychiatry","score_opus":0.024597191526597596,"score_gpt":0.32204426608404085,"score_spread":0.29744707455744324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975352281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99168724,0.0013954072,0.0009413334,0.0035945394,0.00221027,0.00014343677,0.000013371151,0.0000013366227,0.000013064671],"genre_scores_gemma":[0.99830234,0.0013486,0.00010916923,0.0000052544187,0.00014450673,0.0000059297354,0.000007178319,0.0000032880273,0.00007372194],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99942535,0.00006922066,0.00037084045,0.000046527002,0.000011403839,0.0000766448],"domain_scores_gemma":[0.99924856,0.00026991035,0.0003068764,0.00005754043,0.00009392692,0.00002315248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006212731,0.000051237876,0.00015403029,0.00008682219,0.000086142754,0.0000029402715,0.000055484346,0.0000335217,0.000061521445],"category_scores_gemma":[0.00038226417,0.000028346682,0.00004927111,0.000049889306,0.00009579515,0.00004274118,0.000006460237,0.00025944153,2.841909e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010335048,0.0003046207,0.028183596,0.000042194242,0.00019390287,3.2106098e-7,0.00083314837,0.0000019947315,0.6964018,0.0021540239,0.005505983,0.26534495],"study_design_scores_gemma":[0.0072098714,0.001183507,0.8725051,0.00031243326,0.00037131316,0.00007583179,0.00067421695,0.00003114082,0.008605778,0.0043026186,0.10463261,0.00009556029],"about_ca_topic_score_codex":0.000025372821,"about_ca_topic_score_gemma":0.00008812828,"teacher_disagreement_score":0.84432155,"about_ca_system_score_codex":0.000005653786,"about_ca_system_score_gemma":0.00003085136,"threshold_uncertainty_score":0.11559441},"labels":[],"label_agreement":null},{"id":"W1975522920","doi":"10.1016/s0923-2508(01)01261-x","title":"Expression of Neisseria gonorrhoeae cell division genes ftsZ, ftsE and minD is influenced by environmental conditions","year":2001,"lang":"en","type":"article","venue":"Research in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"FtsZ; Biology; Promoter; Gene; Cell division; Neisseria gonorrhoeae; Molecular biology; Gene expression; Escherichia coli; Genetics; Cell","score_opus":0.02306979931459447,"score_gpt":0.3164464509128724,"score_spread":0.2933766515982779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975522920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947044,0.0041642766,0.000005278155,0.00016630816,0.00017612938,0.00026647563,0.00035350348,0.000008098821,0.00015552033],"genre_scores_gemma":[0.99666643,0.0019999256,0.000032021024,0.000025479701,0.000015123736,0.000027646141,0.00041657416,0.000011691734,0.0008051046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983634,0.00046997244,0.00033174135,0.0003679908,0.0000081081225,0.00045882392],"domain_scores_gemma":[0.999369,0.00024012057,0.00007988207,0.00024080592,0.00003610847,0.000034061686],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037191517,0.00014780815,0.0002652069,0.00027963534,0.00020650678,0.000012293817,0.00017105979,0.00035800526,0.0025094948],"category_scores_gemma":[0.000022101493,0.00012871576,0.00004322561,0.00018496344,0.0005038134,0.00010192831,0.00023332224,0.00033967526,0.00021534089],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001126158,0.00025134275,0.043421302,0.00001211334,0.000012828138,7.129415e-7,0.00015862835,0.0000011521877,0.95173603,0.000007204105,0.0027319419,0.0015541436],"study_design_scores_gemma":[0.0011858478,0.0003270186,0.025882186,0.00003689768,0.0000048247243,0.00007729387,0.0002584309,0.0000010086571,0.8774822,0.00006551517,0.09454908,0.00012971781],"about_ca_topic_score_codex":0.00024188253,"about_ca_topic_score_gemma":0.000025759455,"teacher_disagreement_score":0.09181714,"about_ca_system_score_codex":0.00004273025,"about_ca_system_score_gemma":0.000030591982,"threshold_uncertainty_score":0.99840236},"labels":[],"label_agreement":null},{"id":"W1975710912","doi":"10.1007/s10096-009-0848-8","title":"Safety and immunogenicity of an investigational quadrivalent meningococcal conjugate vaccine after one or two doses given to infants and toddlers","year":2009,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Immunogenicity; Medicine; Conjugate vaccine; Meningococcal vaccine; Titer; Neisseria meningitidis; Adverse effect; Pediatrics; Immunology; Immunization; Internal medicine; Antibody; Biology","score_opus":0.024262198096182772,"score_gpt":0.31200672265301976,"score_spread":0.28774452455683697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975710912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967737,0.0014348116,0.00009184823,0.0005581498,0.000673209,0.00020872003,0.00017449255,0.00002987104,0.00005517237],"genre_scores_gemma":[0.9981201,0.00063122046,0.00025988973,0.0006440622,0.00024889942,0.0000015515169,0.00004053503,0.00001755923,0.00003616972],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99610585,0.0016640603,0.0016212405,0.00032454872,0.000018780658,0.0002655418],"domain_scores_gemma":[0.9980327,0.00051221607,0.00075067533,0.00021356034,0.00029323186,0.00019760452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010696154,0.00025114883,0.0008537585,0.00018771386,0.00015673705,0.00002740146,0.00017805667,0.000119153265,0.0003519798],"category_scores_gemma":[0.0008950842,0.00018807389,0.00019604947,0.00013005525,0.00035522456,0.00019705715,0.00013364018,0.00039103706,0.000021928658],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.022423415,0.0016161355,0.2965454,0.000029073184,0.0011307048,0.00003813975,0.00030076216,0.00003741198,0.6326925,0.00010482402,0.00045318113,0.044628438],"study_design_scores_gemma":[0.007643399,0.0071385372,0.9719354,0.00015678922,0.0003369982,0.0011395608,0.000031713338,0.0000010063533,0.0036628193,0.00012404147,0.007576467,0.00025329515],"about_ca_topic_score_codex":0.000019377534,"about_ca_topic_score_gemma":0.000034503293,"teacher_disagreement_score":0.67538995,"about_ca_system_score_codex":0.000017844692,"about_ca_system_score_gemma":0.000113488175,"threshold_uncertainty_score":0.76694304},"labels":[],"label_agreement":null},{"id":"W1976232825","doi":"10.1016/j.vaccine.2011.12.126","title":"The challenge of post-implementation surveillance for novel meningococcal vaccines","year":2012,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Medicine; Meningococcal meningitis; Meningitis; Epidemiology; Virology; Bacterial meningitis; Neisseria meningitidis; Mass vaccination; Vaccination; Immunology; Intensive care medicine; Pediatrics; Immunization; Antigen; Biology","score_opus":0.05507686545022385,"score_gpt":0.34723628193823225,"score_spread":0.2921594164880084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976232825","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001815166,0.99526566,0.000076581724,0.00024935039,0.0022879194,0.0012727624,0.0005757065,0.000041523424,0.000048983864],"genre_scores_gemma":[0.0010954271,0.9962,0.00003774141,0.000006038298,0.00044192976,0.00025552433,0.0014056219,0.00004849606,0.00050916645],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983697,0.00013205071,0.0008189214,0.0002688011,0.00001441649,0.00039610473],"domain_scores_gemma":[0.9979969,0.0006599942,0.00067063567,0.0004136168,0.0002396548,0.000019181814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054221164,0.00034074453,0.0011071793,0.0001173659,0.0002787022,0.000016371527,0.00028301592,0.00035082168,0.0004939585],"category_scores_gemma":[0.00007075152,0.00020068327,0.00039045486,0.00016325105,0.000009926147,0.0000703173,0.00009768049,0.00020047967,0.00005818025],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000729847,0.00011474043,0.00005604959,0.0020778463,0.00061123125,2.5310715e-8,0.000040432682,3.3331986e-8,0.0013014978,0.0017089348,0.0016848939,0.9923313],"study_design_scores_gemma":[0.0010637741,0.00024697845,0.00025395618,0.0002719192,0.00043158102,0.000026761045,0.000027824904,8.838299e-8,0.00010956017,0.000014872175,0.9973445,0.00020821516],"about_ca_topic_score_codex":0.00012364367,"about_ca_topic_score_gemma":0.00038142916,"teacher_disagreement_score":0.9956596,"about_ca_system_score_codex":0.00003288648,"about_ca_system_score_gemma":0.0000779183,"threshold_uncertainty_score":0.8183626},"labels":[],"label_agreement":null},{"id":"W1977497786","doi":"10.1097/00006454-200004000-00015","title":"Vaccines for prevention of meningococcal disease","year":2000,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; Children's & Women's Health Centre of British Columbia","funders":"","keywords":"Family medicine; Medicine; Meningococcal disease; Infectious disease (medical specialty); Pediatrics; Disease; Neisseria meningitidis; Pathology","score_opus":0.02495853947789273,"score_gpt":0.3117991755931635,"score_spread":0.2868406361152708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977497786","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0066192495,0.9888131,0.00012495481,0.000032137166,0.0027081794,0.001232812,0.0003249793,0.000060962644,0.000083607316],"genre_scores_gemma":[0.0018628208,0.9938958,0.000005968312,0.000008779149,0.0025423556,0.0002622094,0.00017375403,0.00005881157,0.0011894621],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977308,0.0005561956,0.0009983766,0.00027614072,0.000037814294,0.0004006885],"domain_scores_gemma":[0.9978286,0.00045988688,0.0010132621,0.00038399803,0.00018159844,0.00013262317],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041585768,0.00043462054,0.0010665348,0.0004067,0.0006549819,0.00006343983,0.00033901175,0.0002616105,0.0013231052],"category_scores_gemma":[0.0002544131,0.00026579588,0.001537823,0.00036010196,0.0000528183,0.00012298934,0.00006514031,0.00058319035,0.0001195381],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007480374,0.0011576912,0.0024424952,0.00910395,0.001526746,0.000005534184,0.00005185219,0.000026677211,0.000006847689,0.0002631539,0.019483639,0.9651834],"study_design_scores_gemma":[0.0011226583,0.0002306356,0.0005027382,0.00074654317,0.011596149,0.00041323705,0.000004051882,9.698608e-7,5.7566075e-7,0.001425769,0.9836032,0.00035347807],"about_ca_topic_score_codex":0.000009024247,"about_ca_topic_score_gemma":0.0000021668673,"teacher_disagreement_score":0.9648299,"about_ca_system_score_codex":0.000076268436,"about_ca_system_score_gemma":0.0007071333,"threshold_uncertainty_score":0.99997944},"labels":[],"label_agreement":null},{"id":"W1977584409","doi":"10.1099/jmm.0.079921-0","title":"Determination of serotyping antigens, clonal analysis and genetic characterization of the 4CMenB vaccine antigen genes in invasive Neisseria meningitidis from Western Canada, 2009 to 2013","year":2014,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Neisseria meningitidis; Biology; Serotype; Virology; Genotyping; Antigen; Neisseria; Genotype; Gene; Multilocus sequence typing; Locus (genetics); Meningococcal vaccine; Microbiology; Genetics; Bacteria","score_opus":0.0058796365277284995,"score_gpt":0.22262565957300684,"score_spread":0.21674602304527835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977584409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959638,0.00052590325,0.0012858654,0.0014098383,0.0006377212,0.00009900707,0.000075583535,0.0000015849745,6.932537e-7],"genre_scores_gemma":[0.9991113,0.00043367443,0.0001607614,0.00014076606,0.000076506614,0.0000014451043,0.000057405992,0.000005887735,0.000012251024],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99855864,0.00037236736,0.0007457789,0.00013801444,0.000029644558,0.0001555343],"domain_scores_gemma":[0.998879,0.00017845679,0.00060719013,0.00012462692,0.00017215245,0.000038545782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035323764,0.00011442498,0.0005277043,0.00023802633,0.00004439055,0.000005129658,0.00022811774,0.00022447993,0.00022694649],"category_scores_gemma":[0.00018944137,0.00007979681,0.0000771192,0.00027273467,0.000053875403,0.0000454191,0.00009174137,0.0001686871,0.0000010940083],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056607645,0.000027217895,0.31476223,0.000008280695,0.00015044754,8.107481e-7,0.00007768452,0.000004503908,0.681632,0.0000021589585,0.000050449446,0.0032276295],"study_design_scores_gemma":[0.0006493306,0.00013554777,0.80612266,0.00009033736,0.00011469419,0.0001096846,0.000023039895,0.000015077499,0.19117264,0.000010049708,0.0014918307,0.00006507888],"about_ca_topic_score_codex":0.03889069,"about_ca_topic_score_gemma":0.20438018,"teacher_disagreement_score":0.49136046,"about_ca_system_score_codex":0.000026911775,"about_ca_system_score_gemma":0.0002011476,"threshold_uncertainty_score":0.96750945},"labels":[],"label_agreement":null},{"id":"W1977912042","doi":"10.1128/jcm.42.11.5364-5367.2004","title":"Polymorphisms of the Fimbria <i>fim3</i> Gene of <i>Bordetella pertussis</i> Strains Isolated in Canada","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; Ministry of Health and Long Term Care; Dalhousie University; Health Canada","funders":"","keywords":"Fimbria; Bordetella pertussis; Microbiology; Biology; Pertactin; Gene; Antigen; Epitope; Virology; Bordetella; Antibody; Pertussis toxin; Virulence; Genetics; Bacteria","score_opus":0.01980878792537869,"score_gpt":0.2755244896073096,"score_spread":0.25571570168193086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977912042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99373716,0.0009966486,0.000028427496,0.0011995957,0.0037495154,0.0001055994,0.00011073657,0.0000025156314,0.00006977935],"genre_scores_gemma":[0.99907357,0.0003109121,0.00008353466,0.000350268,0.000093395254,6.230489e-7,0.0000088222705,0.000010189158,0.00006871699],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99695927,0.000458108,0.0021480282,0.00015579557,0.000014593257,0.0002642094],"domain_scores_gemma":[0.9976812,0.0003721444,0.0014254374,0.00025400677,0.0002354268,0.000031781638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006290701,0.00015540709,0.0009266789,0.00008945693,0.00004352353,0.0000023757502,0.00041590532,0.00036072763,0.0002464844],"category_scores_gemma":[0.00037771094,0.00009718909,0.00035308034,0.0002213183,0.00029247996,0.000040989707,0.00009107536,0.0006432633,0.0000043324217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036522473,0.00027899383,0.032342166,0.0000081553535,0.000206384,0.000003601394,0.000042734628,0.00007305392,0.96463907,0.00006565948,0.0008557189,0.0011192674],"study_design_scores_gemma":[0.010680969,0.0020153755,0.30992183,0.00026849765,0.00019891668,0.0020654153,0.00018092102,0.000001204428,0.6410606,0.00033189895,0.032956388,0.0003180205],"about_ca_topic_score_codex":0.120163746,"about_ca_topic_score_gemma":0.2551655,"teacher_disagreement_score":0.32357845,"about_ca_system_score_codex":0.000079618076,"about_ca_system_score_gemma":0.0018471222,"threshold_uncertainty_score":0.88569516},"labels":[],"label_agreement":null},{"id":"W1978789711","doi":"10.1016/j.vaccine.2009.01.026","title":"Rapid identification of herd effects with the introduction of serogroup C meningococcal conjugate vaccine in Ontario, Canada, 2000–2006","year":2009,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Ministry of Health and Long Term Care; Hospital for Sick Children","funders":"","keywords":"Herd immunity; Meningococcal disease; Meningococcal vaccine; Carriage; Medicine; Neisseria meningitidis; Conjugate vaccine; Vaccination; Incidence (geometry); Virology; Immunization; Environmental health; Immunology; Biology; Antibody","score_opus":0.004349810972025705,"score_gpt":0.19234922000863067,"score_spread":0.18799940903660498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978789711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641913,0.0005567229,0.000040999344,0.002130438,0.00044380114,0.00033823316,0.0000079468855,0.000015037986,0.00004766942],"genre_scores_gemma":[0.998837,0.000021738892,0.00001542124,0.000039550145,0.00007440599,0.0000100121115,0.00009848771,0.0000075206203,0.0008958751],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906796,0.00011368998,0.00041213946,0.00019864121,0.000023321732,0.00018425245],"domain_scores_gemma":[0.9992799,0.00005670686,0.00026120743,0.00027129106,0.000118804506,0.000012054907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002450399,0.00013970768,0.0003151222,0.00010070996,0.00006904125,0.000006216241,0.00011702137,0.00009280931,0.00040875617],"category_scores_gemma":[0.000023984787,0.000092326656,0.0000335583,0.00027232422,0.000009767054,0.00008807916,0.000016338967,0.00020064432,0.000004737501],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079546595,0.00017488429,0.028489945,0.000020910813,0.00009660698,9.286596e-7,0.00022677692,0.000065712375,0.9553582,0.00021296804,0.010421145,0.0041364306],"study_design_scores_gemma":[0.0018998566,0.000522925,0.66590744,0.00001911418,0.000050366423,0.000034469125,0.000041903153,0.000003137264,0.31373036,0.000018194518,0.017685534,0.000086708125],"about_ca_topic_score_codex":0.62167007,"about_ca_topic_score_gemma":0.9019028,"teacher_disagreement_score":0.64162785,"about_ca_system_score_codex":0.000110237066,"about_ca_system_score_gemma":0.00016579591,"threshold_uncertainty_score":0.44755936},"labels":[],"label_agreement":null},{"id":"W1978964554","doi":"10.4161/hv.27051","title":"Immunogenicity and safety of a CRM-conjugated meningococcal ACWY vaccine administered concomitantly with routine vaccines starting at 2 months of age","year":2013,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Victoria","keywords":"Medicine; Reactogenicity; Immunogenicity; Tetanus; Diphtheria; Vaccination; Meningococcal vaccine; Population; Measles; Poliovirus; Immunology; Pediatrics; Adverse effect; Conjugate vaccine; Immunization; Internal medicine; Immune system; Virus","score_opus":0.0187008010062839,"score_gpt":0.25545709083970863,"score_spread":0.23675628983342473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978964554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993934,0.004130825,0.00005309238,0.00018622,0.0002550041,0.00097144046,0.00006958738,0.000115232106,0.000284614],"genre_scores_gemma":[0.99810266,0.00029104826,0.00017965616,0.000093419396,0.00005291801,0.00005854437,0.00015411455,0.00008166757,0.0009859562],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9971426,0.00025894505,0.0014787324,0.00048700254,0.000056213918,0.0005764774],"domain_scores_gemma":[0.99746567,0.00027013017,0.00096126937,0.00075769424,0.00049523683,0.000050006533],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033287238,0.0005554278,0.001189224,0.00022243055,0.000464141,0.000046780144,0.00036139792,0.00035181368,0.0021669513],"category_scores_gemma":[0.00003918926,0.00043496388,0.0001831426,0.00031849244,0.00014726767,0.0002657333,0.0002714292,0.00032152166,0.000028613606],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002827964,0.00028828185,0.08071775,0.00009580163,0.0012072866,0.0000017087222,0.0009620049,0.0000053310196,0.91185266,0.00035787965,0.00012910437,0.0015542422],"study_design_scores_gemma":[0.01666634,0.0025252046,0.5631077,0.00028439402,0.0005313912,0.00015916732,0.00065472873,0.00003194812,0.40972045,0.00024702598,0.0052962056,0.00077544246],"about_ca_topic_score_codex":0.0014925121,"about_ca_topic_score_gemma":0.00062979787,"teacher_disagreement_score":0.5021322,"about_ca_system_score_codex":0.000066248846,"about_ca_system_score_gemma":0.000053653257,"threshold_uncertainty_score":0.9998102},"labels":[],"label_agreement":null},{"id":"W1979248837","doi":"10.1371/journal.ppat.1003308","title":"Microbes Bind Complement Inhibitor Factor H via a Common Site","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health; Connaught Fund; Academy of Finland","keywords":"Factor H; Biology; Complement system; Microbiology; Alternative complement pathway; Innate immune system; Binding site; Complement control protein; Complement membrane attack complex; Biochemistry; Genetics; Immune system; Receptor","score_opus":0.020903687136779647,"score_gpt":0.23328492136968218,"score_spread":0.21238123423290253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979248837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976182,0.00024312786,0.000033983426,0.00023570248,0.00074636843,0.00041247794,0.00034011534,0.00010857237,0.00026145115],"genre_scores_gemma":[0.9983854,0.000020715019,0.0001132253,0.0001237383,0.00011622662,0.00007357491,0.0002842781,0.000020398553,0.000862443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990543,0.00010328628,0.00027162314,0.00023041692,0.000013864696,0.00032651683],"domain_scores_gemma":[0.9994888,0.00005106289,0.00008363234,0.00025786733,0.00008682149,0.0000318584],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000376522,0.0001807425,0.00025704005,0.000086947475,0.00022101375,0.000037562506,0.000101841506,0.00015066683,0.009358895],"category_scores_gemma":[0.000011176093,0.00014883906,0.000092566515,0.0000919225,0.00004989401,0.00009976188,0.000100236284,0.00015366265,0.0070513436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011806416,0.00024910315,0.0258569,0.000011344124,0.000100270685,7.23372e-7,0.00021717096,1.877683e-7,0.96634287,0.000023295435,0.005246821,0.0019395368],"study_design_scores_gemma":[0.0010819006,0.00029903583,0.114807665,0.000034194032,0.0000657381,0.000045290486,0.000088624874,0.000009357688,0.8042155,0.0000708223,0.07892478,0.00035708194],"about_ca_topic_score_codex":0.00042273416,"about_ca_topic_score_gemma":0.00014910405,"teacher_disagreement_score":0.16212733,"about_ca_system_score_codex":0.000029010169,"about_ca_system_score_gemma":0.000012758589,"threshold_uncertainty_score":0.9937218},"labels":[],"label_agreement":null},{"id":"W1979354833","doi":"10.1007/s00381-008-0751-0","title":"An unexpected intracranial pressure crisis: infant brain abscess of unusual aetiology","year":2008,"lang":"en","type":"article","venue":"Child s Nervous System","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton General Hospital; McMaster University Medical Centre; McMaster University","funders":"","keywords":"Medicine; Etiology; Neurosurgery; Brain abscess; Raised intracranial pressure; Intracranial pressure; Abscess; Surgery; Pathology","score_opus":0.008124805825222148,"score_gpt":0.22776770778558464,"score_spread":0.21964290196036249,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979354833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947107,0.0013857097,0.00014435295,0.0002650092,0.0018987615,0.00029645237,0.00010513107,0.00024406837,0.00094984425],"genre_scores_gemma":[0.99915737,0.000021504915,0.000019959312,0.0000653887,0.00032648555,0.000030419662,0.00013685982,0.000024332316,0.00021771037],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983633,0.00042316597,0.00052794156,0.0003435205,0.00002228671,0.00031979475],"domain_scores_gemma":[0.9990675,0.0000632209,0.00023529107,0.0004514672,0.00014602565,0.00003650085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016028433,0.00021691079,0.00053793454,0.00015281148,0.00036343117,0.000010036824,0.00026460981,0.00042751007,0.00020476538],"category_scores_gemma":[0.000031712127,0.00018058586,0.000113549606,0.00017844982,0.00013038724,0.00011675556,0.000048792674,0.00025591973,0.00008575452],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070865854,0.0006432497,0.012483596,0.0002753688,0.00082175335,0.000029909417,0.0029264751,0.00014471711,0.9603738,0.0051022163,0.015705641,0.0007845672],"study_design_scores_gemma":[0.010157633,0.002878836,0.6784092,0.00046033948,0.0005342399,0.016495017,0.0056916317,0.0001643333,0.16547872,0.000053466447,0.11806786,0.0016086996],"about_ca_topic_score_codex":0.0012595586,"about_ca_topic_score_gemma":0.0001296088,"teacher_disagreement_score":0.7948951,"about_ca_system_score_codex":0.000019396028,"about_ca_system_score_gemma":0.000051189225,"threshold_uncertainty_score":0.73640776},"labels":[],"label_agreement":null},{"id":"W1979383005","doi":"10.1016/j.vaccine.2011.07.068","title":"Tolerability and antibody response in adolescents and adults revaccinated with tetanus toxoid, reduced diphtheria toxoid, and acellular pertussis vaccine adsorbed (Tdap) 4–5 years after a previous dose","year":2011,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Children's Hospital; Institut National de Santé Publique du Québec; Dalhousie University","funders":"Sanofi Pasteur","keywords":"Medicine; Tetanus; Diphtheria; Toxoid; Tolerability; Adverse effect; Filamentous haemagglutinin adhesin; Reactogenicity; Pertactin; Booster dose; Vaccination; Immunology; Pediatrics; Pertussis vaccine; Immunogenicity; Immunization; Internal medicine; Antibody; Pertussis toxin","score_opus":0.008503635452357878,"score_gpt":0.22547683265122012,"score_spread":0.21697319719886224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979383005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927061,0.005894059,0.0000054601965,0.0001858567,0.00020862244,0.00086470874,0.000028493989,0.00008633166,0.000020338573],"genre_scores_gemma":[0.9986098,0.000827521,0.000099623896,0.000059529255,0.000030834603,0.00005182905,0.000029257202,0.000044508597,0.00024713713],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977422,0.00047397998,0.00052956434,0.0007652656,0.000029729812,0.00045928164],"domain_scores_gemma":[0.99906415,0.000067475616,0.00016414336,0.0005051708,0.00010356595,0.00009548299],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00049547135,0.00040312918,0.0006771755,0.00022601025,0.00013461048,0.00004633038,0.00012169051,0.00032468414,0.0004120708],"category_scores_gemma":[0.00014224181,0.00031366813,0.000045586476,0.00031655453,0.000038087015,0.00024290309,0.00018614996,0.00033804172,0.000013901729],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.055954248,0.0005933833,0.50483304,0.00016274428,0.0001379392,0.000055915687,0.0018012717,1.790811e-7,0.42905286,0.000003743365,0.00006155851,0.0073430967],"study_design_scores_gemma":[0.01000092,0.0016011815,0.97595376,0.00045622952,0.00010472037,0.00037562393,0.00019113685,0.000008637438,0.010247433,0.00002247786,0.00064033596,0.00039756228],"about_ca_topic_score_codex":0.0010087284,"about_ca_topic_score_gemma":0.00054290006,"teacher_disagreement_score":0.4711207,"about_ca_system_score_codex":0.000038126127,"about_ca_system_score_gemma":0.000036295478,"threshold_uncertainty_score":0.9999315},"labels":[],"label_agreement":null},{"id":"W1979399285","doi":"10.1186/1710-1492-7-s2-a23","title":"Immune response of adults with secondary immunodeficiency to pediatric Haemophilus influenzae type b (Hib) vaccine","year":2011,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"NOSM University","funders":"","keywords":"Hib vaccine; Medicine; Immune system; Haemophilus influenzae; Immunodeficiency; Virology; Immunology; Primary immunodeficiency; Pasteurellaceae; Immunization; Microbiology; Biology; Conjugate vaccine","score_opus":0.017956697447445623,"score_gpt":0.26715271037259786,"score_spread":0.24919601292515223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979399285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98930717,0.007978378,0.00003536915,0.00017560624,0.0015533839,0.0002711949,0.000017993594,0.000078918914,0.00058198563],"genre_scores_gemma":[0.996867,0.0020760677,0.00026031164,0.0001415749,0.000057648907,0.00002114177,0.000032018062,0.00003321641,0.0005110171],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99725056,0.0005682279,0.0011150497,0.0005486422,0.000025833391,0.00049169094],"domain_scores_gemma":[0.99815804,0.00044382733,0.00036335987,0.00064893026,0.00032936418,0.000056468583],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00066205644,0.00032108705,0.0007729646,0.00027803396,0.00020302284,0.00000952578,0.00036098086,0.00058495137,0.002004882],"category_scores_gemma":[0.00034162757,0.00025297704,0.00014628346,0.00046452097,0.00027175725,0.00014135244,0.00032690525,0.00059344334,0.00033913058],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.25240898,0.0052817925,0.09128942,0.000101042424,0.005357625,0.000064781096,0.005026623,0.0000058950254,0.5638642,0.004851711,0.0016853855,0.07006256],"study_design_scores_gemma":[0.005023941,0.01022491,0.9576432,0.00004251064,0.00006578756,0.00026935263,0.00036833526,6.278767e-7,0.0065527223,0.00007580804,0.019372635,0.00036017087],"about_ca_topic_score_codex":0.0006978852,"about_ca_topic_score_gemma":0.00012283585,"teacher_disagreement_score":0.86635375,"about_ca_system_score_codex":0.000014699129,"about_ca_system_score_gemma":0.00016414348,"threshold_uncertainty_score":0.99999225},"labels":[],"label_agreement":null},{"id":"W1979456422","doi":"10.1016/j.pep.2006.07.017","title":"Expression and purification of a trivalent pertussis toxin–diphtheria toxin–tetanus toxin fusion protein in Escherichia coli","year":2006,"lang":"en","type":"article","venue":"Protein Expression and Purification","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Diphtheria toxin; Toxin; Fusion protein; Toxoid; Escherichia coli; Corynebacterium diphtheriae; Microbiology; Recombinant DNA; Biology; Pertussis toxin; Affinity chromatography; Molecular biology; Biochemistry; Diphtheria; Tetanus; Virology; Vaccination; G protein; Enzyme","score_opus":0.014591678716536606,"score_gpt":0.2389061844724109,"score_spread":0.2243145057558743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979456422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936133,0.002826231,0.00056207326,0.0005116936,0.00016792567,0.0018459354,0.00003056861,0.00007675489,0.00036551242],"genre_scores_gemma":[0.9957079,0.00022672024,0.0016490731,0.000014224987,0.0000675186,0.0007046578,0.00014822277,0.000026873293,0.0014548014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979222,0.0004500814,0.00071302266,0.00055914506,0.000065566346,0.00029002043],"domain_scores_gemma":[0.998936,0.000052054456,0.00043933422,0.0004119349,0.000114931114,0.000045745313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004669483,0.00028405993,0.0003811022,0.00024013764,0.00026817675,0.000052378124,0.00014644228,0.0004498422,0.00033484164],"category_scores_gemma":[0.00009890302,0.00023306214,0.00006257861,0.00027043233,0.00012566257,0.00028611947,0.00008879552,0.0002609489,0.000016985208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049662456,0.00045603086,0.001007367,0.00011091048,0.000008395011,3.8875615e-7,0.000330048,0.000002008771,0.9880874,0.0006332015,0.000228835,0.008638754],"study_design_scores_gemma":[0.0018498133,0.00018203197,0.034481827,0.00042436586,0.00001569519,0.00000733413,0.00018523392,0.000040007486,0.9512391,0.00054473255,0.010767039,0.00026282275],"about_ca_topic_score_codex":0.00036483363,"about_ca_topic_score_gemma":0.000029845516,"teacher_disagreement_score":0.03684834,"about_ca_system_score_codex":0.000042394673,"about_ca_system_score_gemma":0.000041694744,"threshold_uncertainty_score":0.9503998},"labels":[],"label_agreement":null},{"id":"W1980702252","doi":"10.1086/378743","title":"Neisseria meningitidis Carriage during an Outbreak of Serogroup C Disease","year":2003,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fraser Health; BC Centre for Disease Control; University of British Columbia","funders":"Health Canada","keywords":"Neisseria meningitidis; Carriage; Pulsed-field gel electrophoresis; Outbreak; Meningococcal disease; Medicine; Population; Virology; Vaccination; Immunization; Meningococcal vaccine; Microbiology; Immunology; Biology; Genotype; Antibody; Environmental health; Bacteria","score_opus":0.024960282152888567,"score_gpt":0.32053031799061604,"score_spread":0.29557003583772745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980702252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995469,0.0009786095,0.000026363452,0.000020331358,0.0022756883,0.00023473725,0.00016167689,0.00023566236,0.0005979455],"genre_scores_gemma":[0.99915177,0.00013792289,0.000005041193,0.00004460532,0.00015037962,0.00004424672,0.00012283596,0.000031201933,0.00031201608],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99793226,0.0005900223,0.0006913317,0.0004302446,0.000018610312,0.00033755487],"domain_scores_gemma":[0.99867696,0.00024294022,0.00023167206,0.0005209346,0.00012732283,0.00020017495],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021497162,0.00023406593,0.00049198966,0.00009724796,0.00026414308,0.000032089985,0.00013394318,0.00019860419,0.0016501525],"category_scores_gemma":[0.0008273449,0.00021105171,0.00035130425,0.00018848878,0.00023851165,0.00023785245,0.00005800409,0.00020571555,0.00013280539],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001949467,0.0017637465,0.96712786,0.000058933478,0.00025179156,0.0000042314996,0.000036017034,0.000016053158,0.027220886,0.002285513,0.00026266096,0.00077736576],"study_design_scores_gemma":[0.0024626523,0.00048191648,0.98594975,0.000039275765,0.00030939296,0.000015751955,0.000073478936,0.0000017383117,0.0040087714,0.0008545283,0.0054999855,0.0003027265],"about_ca_topic_score_codex":0.000067383866,"about_ca_topic_score_gemma":0.000037864895,"teacher_disagreement_score":0.023212114,"about_ca_system_score_codex":0.000023864612,"about_ca_system_score_gemma":0.00010243383,"threshold_uncertainty_score":0.99926245},"labels":[],"label_agreement":null},{"id":"W1980763616","doi":"10.1128/jcm.00612-07","title":"Nucleotide Sequence Diversity of the <i>bexA</i> Gene in Serotypeable <i>Haemophilus influenzae</i> Strains Recovered from Invasive Disease Patients in Canada","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Health Canada","keywords":"Haemophilus influenzae; Biology; Gene; Haemophilus; Genetics; Nucleic acid sequence; Sequence (biology); Microbiology; Virology; Pasteurellaceae; Genetic diversity; DNA sequencing; Bacteria; Medicine","score_opus":0.036910148729358404,"score_gpt":0.2794842869242088,"score_spread":0.24257413819485038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980763616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959446,0.00020975967,0.000004432899,0.00021386879,0.0028302774,0.00016394857,0.0005999984,0.0000022320123,0.000030853276],"genre_scores_gemma":[0.99891484,0.00018484936,0.000041777308,0.00071615196,0.00006845165,4.5572102e-7,0.0000484897,0.000007047039,0.000017933515],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974478,0.00050794473,0.0015266751,0.00019796139,0.000019984129,0.00029963034],"domain_scores_gemma":[0.9976675,0.00084037497,0.0009913183,0.00022674327,0.00021499021,0.00005906453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006999192,0.00014555462,0.0006285271,0.000088151486,0.000075961914,0.0000033881468,0.00044412003,0.00023993528,0.00013699004],"category_scores_gemma":[0.0010014165,0.00010498725,0.00018710484,0.00020065022,0.00018366864,0.00010252504,0.00030879184,0.00067650236,0.000006831235],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00097446877,0.00022306966,0.77949345,0.0000054557086,0.000072013034,0.000012971102,0.000043117256,0.0000381387,0.21801156,0.000005959596,0.000634261,0.00048551784],"study_design_scores_gemma":[0.0033449477,0.00018592206,0.97975117,0.00009470591,0.000039185958,0.00001803783,0.00005948799,2.3663573e-7,0.013208733,0.00023444304,0.0029504085,0.00011271963],"about_ca_topic_score_codex":0.32916272,"about_ca_topic_score_gemma":0.7688395,"teacher_disagreement_score":0.43967673,"about_ca_system_score_codex":0.0002091416,"about_ca_system_score_gemma":0.001109947,"threshold_uncertainty_score":0.6753045},"labels":[],"label_agreement":null},{"id":"W1981182545","doi":"10.1016/j.vaccine.2011.12.113","title":"Antibody against Haemophilus influenzae protein D in patients with chronic conditions causing secondary immunodeficiency","year":2012,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"GlaxoSmithKline","keywords":"Haemophilus influenzae; Immunology; Medicine; Antibody; COPD; Immunodeficiency; Disease; Pneumonia; Immunization; Immune system; Biology; Internal medicine; Microbiology; Antibiotics","score_opus":0.007823472998969105,"score_gpt":0.24310059488600044,"score_spread":0.23527712188703134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981182545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99684185,0.0013522152,0.000021594577,0.000057615613,0.00058676756,0.0005033137,0.00006130709,0.00007030223,0.0005050114],"genre_scores_gemma":[0.9987024,0.000013132672,0.000021755215,0.000054743003,0.00007104551,0.000026055865,0.0009208349,0.000022410657,0.00016762524],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998931,0.00008014093,0.00029950435,0.00019566681,0.000017211289,0.00047651067],"domain_scores_gemma":[0.9994921,0.000020740677,0.00011576356,0.0002685005,0.0000781302,0.000024732697],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012405225,0.00019227322,0.0002537401,0.00021711583,0.00024225033,0.00001769821,0.00008150842,0.00015309991,0.0009813496],"category_scores_gemma":[0.000020468487,0.00015279533,0.00003975242,0.0003178336,0.000021841115,0.00040818308,0.000064244196,0.00029847806,0.00021581638],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001326147,0.00051095313,0.40023437,0.000023112603,0.000061365776,8.3012e-7,0.00012641436,0.000012403325,0.5973543,0.00017963182,0.000107467305,0.0012565564],"study_design_scores_gemma":[0.004446901,0.00029676445,0.9682665,0.00009654732,0.000021008473,0.000016084907,0.000022398941,0.000001302631,0.013876945,0.000012363414,0.012705069,0.0002381563],"about_ca_topic_score_codex":0.00023392955,"about_ca_topic_score_gemma":0.00008378237,"teacher_disagreement_score":0.5834773,"about_ca_system_score_codex":0.000104735984,"about_ca_system_score_gemma":0.00007726595,"threshold_uncertainty_score":0.9999319},"labels":[],"label_agreement":null},{"id":"W1981527891","doi":"10.3201/eid0805.010337","title":"Outbreak of Neisseria meningitidis, Edmonton, Alberta, Canada","year":2002,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Capital District Health Authority; Provincial Laboratory of Public Health; University of Alberta","funders":"Centers for Disease Control and Prevention; University of Alberta","keywords":"Neisseria meningitidis; Outbreak; Serotype; clone (Java method); Virology; Meningococcal disease; Microbiology; Biology; Medicine; Bacteria; Genetics; Gene","score_opus":0.006460618427410022,"score_gpt":0.20615206977539732,"score_spread":0.1996914513479873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981527891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868408,0.0022621667,0.000009498142,0.00019194846,0.0019497394,0.000119091404,0.000072567935,0.0000941863,0.0084599955],"genre_scores_gemma":[0.9955387,0.000096553806,0.0000019855709,0.000059571335,0.00008299843,0.000023916486,0.000060855327,0.000019668441,0.004115761],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991239,0.000071423994,0.0002895944,0.00021138022,0.000017422462,0.00028627802],"domain_scores_gemma":[0.9993884,0.000105842504,0.00013450404,0.00024369525,0.00008444651,0.000043110926],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00002869942,0.0001784631,0.0002697364,0.00008451522,0.00022357587,0.000013344483,0.000100215846,0.00007756246,0.0094070295],"category_scores_gemma":[0.000115580195,0.00016804719,0.00010120715,0.00018037533,0.00005180586,0.000103494895,0.00004420451,0.000094623145,0.000117996744],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083030835,0.0010401418,0.5607962,0.00013161474,0.0010328789,0.000004919865,0.00065569015,0.000121517965,0.14962149,0.0017190932,0.2765322,0.008261236],"study_design_scores_gemma":[0.002686265,0.0003415494,0.34033567,0.00010138633,0.00039743344,0.0001540221,0.00025791465,0.00003637623,0.018115748,0.00017761103,0.63656265,0.000833358],"about_ca_topic_score_codex":0.626771,"about_ca_topic_score_gemma":0.44886047,"teacher_disagreement_score":0.36003047,"about_ca_system_score_codex":0.000059265723,"about_ca_system_score_gemma":0.000071234914,"threshold_uncertainty_score":0.99149853},"labels":[],"label_agreement":null},{"id":"W1982085907","doi":"10.1139/w2012-103","title":"Identification and proposal of a potentially new clonal complex that is a common cause of MenB disease in central and eastern Canada","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Université Laval; Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"European Commission; Wellcome Trust","keywords":"Multilocus sequence typing; Biology; Neisseria meningitidis; Locus (genetics); Meningococcal disease; Typing; Genetics; Genotype; Gene; Bacteria","score_opus":0.018494088075444122,"score_gpt":0.22598116192539627,"score_spread":0.20748707384995216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982085907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950513,0.0031136642,0.00001810794,0.00081517495,0.0006385933,0.00009253109,0.00026315034,7.924071e-7,0.0000066678977],"genre_scores_gemma":[0.99965733,0.000051461197,0.000022993112,0.00008079458,0.000037782836,4.6605064e-7,0.00004143249,0.000005449632,0.000102272126],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991431,0.00012536938,0.00037959777,0.000080689075,0.00000762973,0.00026359293],"domain_scores_gemma":[0.9993823,0.000027513166,0.00028984388,0.000078803154,0.00006854114,0.00015299536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013439338,0.00009314323,0.00027729754,0.00016184479,0.000046203888,0.000006277135,0.00008617832,0.00009455781,0.00018552167],"category_scores_gemma":[0.000019937856,0.00008231655,0.00003309958,0.00005325075,0.00016044284,0.00008068586,0.000018300108,0.0001246252,6.612485e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010414809,0.000024070843,0.48004702,0.000021817019,0.000102759666,0.0000043903387,0.00034206852,0.0000014713244,0.51624477,0.00014348308,0.0023355794,0.00062844093],"study_design_scores_gemma":[0.0013187336,0.00011700293,0.95968425,0.00006123603,0.00011619875,0.00076513836,0.00014604772,0.0000015521944,0.025727535,0.000060322243,0.011881886,0.00012008233],"about_ca_topic_score_codex":0.4728135,"about_ca_topic_score_gemma":0.84177536,"teacher_disagreement_score":0.49051723,"about_ca_system_score_codex":0.0000577724,"about_ca_system_score_gemma":0.0013467984,"threshold_uncertainty_score":0.5306971},"labels":[],"label_agreement":null},{"id":"W1982223048","doi":"10.1074/jbc.m112.434365","title":"Minor Modifications to the Phosphate Groups and the C3′ Acyl Chain Length of Lipid A in Two Bordetella pertussis Strains, BP338 and 18-323, Independently Affect Toll-like Receptor 4 Protein Activation","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Centre National de la Recherche Scientifique","keywords":"Lipid A; TLR4; Bordetella pertussis; Receptor; Biochemistry; Toll-like receptor; Chemistry; Locus (genetics); Gene; Biology; Lipopolysaccharide; Bacteria; Genetics; Innate immune system; Immunology","score_opus":0.018563997663322333,"score_gpt":0.25312306399147455,"score_spread":0.2345590663281522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982223048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957724,0.0007173133,0.00003462637,0.0028512548,0.00010702812,0.00040460113,0.000012944032,0.000006351399,0.00009343926],"genre_scores_gemma":[0.99915504,0.00030356407,0.00006629257,0.00007480588,0.00011425758,0.000050626517,0.0000088348215,0.0000050714043,0.00022148465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990212,0.00023154286,0.00040123082,0.00015551917,0.000026211172,0.00016430419],"domain_scores_gemma":[0.9991597,0.0002603332,0.00030586883,0.00013975281,0.00010075656,0.000033596956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006128883,0.00013646891,0.00029386827,0.000035719993,0.00013984652,0.000034216377,0.00017749975,0.00017664056,0.00038211772],"category_scores_gemma":[0.0003741695,0.00006504539,0.000075175994,0.00011871496,0.0001975666,0.00008028862,0.0000756604,0.0004038126,0.0000047764947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003206691,0.00010751023,0.0028272325,0.00001567788,0.000068118556,1.847111e-7,0.00022058483,0.0000029185035,0.99101686,0.000051268536,0.00033688062,0.005032109],"study_design_scores_gemma":[0.0042563733,0.00042539387,0.07883739,0.000133309,0.000038240665,0.00015627494,0.0014042804,0.00002183991,0.9094929,0.00027270854,0.0047366093,0.00022464656],"about_ca_topic_score_codex":0.0001160238,"about_ca_topic_score_gemma":0.000011268097,"teacher_disagreement_score":0.08152391,"about_ca_system_score_codex":0.00002368643,"about_ca_system_score_gemma":0.000028982504,"threshold_uncertainty_score":0.4183921},"labels":[],"label_agreement":null},{"id":"W1982332903","doi":"10.1016/j.jemermed.2013.03.042","title":"Does This Child Have Bacterial Meningitis? A Systematic Review of Clinical Prediction Rules for Children with Suspected Bacterial Meningitis","year":2013,"lang":"en","type":"review","venue":"Journal of Emergency Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Institute for Clinical Evaluative Sciences; SickKids Foundation; St. Michael's Hospital; Hospital for Sick Children","funders":"","keywords":"Bacterial meningitis; Meningitis; Medicine; Intensive care medicine; Pediatrics","score_opus":0.051623535134988366,"score_gpt":0.36426953544374374,"score_spread":0.3126460003087554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982332903","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017020695,0.9705728,0.000053087948,0.00015447989,0.023165932,0.0035621356,0.00061541534,0.000031719865,0.00014231307],"genre_scores_gemma":[0.00007192319,0.9915652,0.000091392394,0.0000071112427,0.0054877405,0.00020924715,0.0015606554,0.0000798553,0.00092687365],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99078906,0.0011612069,0.007087586,0.0004287126,0.00013407643,0.00039938427],"domain_scores_gemma":[0.9894022,0.00043974133,0.008319397,0.00052212167,0.0012075106,0.00010908307],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002340345,0.0006992689,0.007389092,0.00042110286,0.00018488806,0.000012010693,0.00051779184,0.00072622957,0.016379401],"category_scores_gemma":[0.002387493,0.00031584734,0.0013806883,0.00026117454,0.00017417473,0.0002455336,0.00006997229,0.00084281195,0.000029096804],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055904733,0.00057009904,0.00018364903,0.85320306,0.016438674,0.0000041639605,0.00014690358,3.9004814e-8,0.00094683864,0.00008892883,0.10934413,0.018514453],"study_design_scores_gemma":[0.0026652545,0.0033033146,0.00016577494,0.618188,0.017723387,0.0011150221,0.000024614294,1.255026e-7,0.000037885147,0.000009680351,0.35641438,0.0003525711],"about_ca_topic_score_codex":0.00009790733,"about_ca_topic_score_gemma":0.000019404408,"teacher_disagreement_score":0.24707024,"about_ca_system_score_codex":0.00006491965,"about_ca_system_score_gemma":0.00031628014,"threshold_uncertainty_score":0.99992937},"labels":[],"label_agreement":null},{"id":"W1982399722","doi":"10.1016/j.vaccine.2010.12.083","title":"Antibody responses in adult and neonatal BALB/c mice to immunization with novel Bordetella pertussis vaccine formulations","year":2011,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Dalhousie University; University of Alberta; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Canada Research Chairs; University of Saskatchewan; Bill and Melinda Gates Foundation","keywords":"Adjuvant; Bordetella pertussis; Immunization; Immune system; Antigen; Immunology; Pertussis vaccine; Vaccination; Immunity; Antibody; CpG Oligodeoxynucleotide; Medicine; Toxoid; Whooping cough; Virology; Biology","score_opus":0.012955986097747854,"score_gpt":0.24896744678870664,"score_spread":0.2360114606909588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982399722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99589884,0.00028897353,0.002530419,0.0004446128,0.00020648797,0.00030662707,0.00005433464,0.00006174326,0.00020794541],"genre_scores_gemma":[0.9976504,0.00012770743,0.001175697,0.00012234654,0.000030115643,0.000015071244,0.00021960058,0.00002297498,0.00063607603],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991294,0.0000570538,0.00028140293,0.000269025,0.000013632355,0.00024946954],"domain_scores_gemma":[0.9994021,0.00008450583,0.000073694726,0.00024070429,0.00016684772,0.000032161297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011043565,0.00018249221,0.00024044511,0.00032889808,0.00016954381,0.000017158873,0.000103301514,0.00013949617,0.0005134034],"category_scores_gemma":[0.00010622565,0.00014207454,0.000025287434,0.0004496081,0.0000073011843,0.00020349877,0.000079995014,0.00013750368,0.000043719137],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002298076,0.00021424193,0.17847976,0.000014314551,0.00007791291,0.0000019005371,0.0013526713,0.00000678412,0.8125109,0.00085510087,0.00013352153,0.0040548025],"study_design_scores_gemma":[0.004095824,0.0006725433,0.92762214,0.00007371729,0.00005061221,0.00019932685,0.00031038426,0.000032863845,0.05584005,0.000026695356,0.010791929,0.00028393284],"about_ca_topic_score_codex":0.0018508245,"about_ca_topic_score_gemma":0.0019351072,"teacher_disagreement_score":0.7566709,"about_ca_system_score_codex":0.000020707163,"about_ca_system_score_gemma":0.000028862407,"threshold_uncertainty_score":0.57936317},"labels":[],"label_agreement":null},{"id":"W1982855789","doi":"10.1186/1471-2458-11-694","title":"Pertussis resurgence in Toronto, Canada: a population-based study including test-incidence feedback modeling","year":2011,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Mount Sinai Hospital; Provincial Laboratory of Public Health; Canada Research Chairs; Public Health Ontario; Hospital for Sick Children; Toronto Public Health; University of Toronto","funders":"University of Toronto; GlaxoSmithKline","keywords":"Medicine; Incidence (geometry); Biostatistics; Epidemiology; Population; Test (biology); Outbreak; Poisson regression; Demography; Environmental health; Internal medicine; Virology; Biology","score_opus":0.10565442343056351,"score_gpt":0.32070097141742193,"score_spread":0.2150465479868584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982855789","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970845,0.00044483156,0.0005560447,0.0004448003,0.0007226498,0.00038996787,0.000017686625,0.000060614544,0.00027892776],"genre_scores_gemma":[0.9993195,0.000014420699,0.00022622567,0.0002235988,0.000034117777,0.000055656656,0.000039909297,0.000012986372,0.00007360568],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982151,0.0003685591,0.0005524464,0.0003223482,0.000034224693,0.00050734647],"domain_scores_gemma":[0.99920136,0.00018512447,0.00014374024,0.00029605548,0.000097125536,0.00007658516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010386833,0.00014799478,0.00029102594,0.00010049659,0.00034309734,0.000021006219,0.00018288706,0.00009437445,0.00086169277],"category_scores_gemma":[0.0006065113,0.00013423694,0.000032435382,0.00024790605,0.000009826535,0.0002613915,0.00006227202,0.00016304587,0.000010912045],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002395474,0.00035452517,0.9967836,0.000019033352,0.0000100094985,7.1507463e-7,0.00062393455,0.00004715833,0.00019980795,0.00012501885,0.0001946564,0.0016175907],"study_design_scores_gemma":[0.0006651685,0.00016780292,0.995192,0.000033205124,0.000003699714,0.0000052951577,0.0017137396,0.0015573313,0.000019389538,0.000013357193,0.0004634316,0.00016560689],"about_ca_topic_score_codex":0.98616475,"about_ca_topic_score_gemma":0.993078,"teacher_disagreement_score":0.00691322,"about_ca_system_score_codex":0.0013251719,"about_ca_system_score_gemma":0.002811039,"threshold_uncertainty_score":0.9434931},"labels":[],"label_agreement":null},{"id":"W1982973946","doi":"10.1016/j.ijid.2010.05.010","title":"Consensus document on controversial issues for the treatment of infections of the central nervous system: bacterial brain abscesses","year":2010,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":150,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Pfizer","keywords":"Central nervous system; Brain abscess; Medicine; Intensive care medicine; Abscess; Neuroscience; Psychology; Surgery; Internal medicine","score_opus":0.0065894764762333006,"score_gpt":0.2694856562980072,"score_spread":0.2628961798217739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982973946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9798766,0.00030112333,0.000049091253,0.0013278088,0.017680395,0.00030485712,0.0003638225,0.000013669493,0.000082670675],"genre_scores_gemma":[0.998756,0.00011428631,0.0000048002516,0.000030397605,0.0009433279,0.000018579758,0.000013273168,0.000008781189,0.000110546396],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99914426,0.00010333736,0.0004735935,0.0000895134,0.000058495076,0.00013077668],"domain_scores_gemma":[0.9976582,0.0009263611,0.0006426373,0.00015221736,0.00059648225,0.00002411667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009622155,0.00013217941,0.00026602868,0.00011013553,0.00016013827,0.00003495159,0.00021618296,0.00008143276,0.00024900932],"category_scores_gemma":[0.0003362184,0.000071153554,0.0004066498,0.000059714366,0.00017978143,0.00005976423,0.000021448874,0.000100265526,0.000003134769],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0053657284,0.005303215,0.124315426,0.00008212002,0.0071414383,0.000005998963,0.0008699545,0.00090091984,0.80543846,0.021969486,0.013953523,0.014653714],"study_design_scores_gemma":[0.019379579,0.008104671,0.3855919,0.00033165535,0.0016451033,0.0012405328,0.0007651107,0.00001914858,0.2586963,0.0009537841,0.32288727,0.00038496742],"about_ca_topic_score_codex":0.00059134857,"about_ca_topic_score_gemma":0.000295283,"teacher_disagreement_score":0.5467422,"about_ca_system_score_codex":0.00009381061,"about_ca_system_score_gemma":0.00014973551,"threshold_uncertainty_score":0.29015577},"labels":[],"label_agreement":null},{"id":"W1982976354","doi":"10.1136/bmj.c3824","title":"An agitated man with earache","year":2010,"lang":"en","type":"article","venue":"BMJ","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Anesthesia; Nausea; Emergency department; Blood pressure; Vomiting; Chest radiograph; Retching; Physical examination; Trismus; Respiratory rate; Surgery; Pediatrics; Internal medicine; Heart rate; Radiography; Psychiatry","score_opus":0.01189657596920767,"score_gpt":0.2747681747259097,"score_spread":0.262871598756702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982976354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954047,0.0000119649,0.00001951018,0.0005037148,0.00070395577,0.00009045613,0.000005199065,0.000075167576,0.0031853386],"genre_scores_gemma":[0.99741435,9.4876486e-7,0.0001928165,0.00007270944,0.00009632908,0.000012264778,0.0000504245,0.000006825773,0.0021533302],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997,0.000028660806,0.000070061935,0.000093581126,0.0000034047628,0.00010428485],"domain_scores_gemma":[0.9997261,0.000010621727,0.000028146758,0.0001864181,0.00003821993,0.00001049954],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000072915296,0.00005430497,0.000066529574,0.000026781881,0.000081960905,0.000013607919,0.000057159046,0.000097394746,0.0015607667],"category_scores_gemma":[0.000010964393,0.0000373417,0.000013690326,0.00004742678,0.000038507176,0.000068362446,0.000008724193,0.00014708689,0.00055777095],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054632674,0.00006243035,0.0070999986,0.0000011273763,0.000027515822,8.3802854e-7,0.0000471364,2.7135457e-7,0.9825844,0.00048464834,0.006690408,0.0029465614],"study_design_scores_gemma":[0.0011934919,0.0004867464,0.34473267,0.0000066167345,0.000028342092,0.00039776423,0.00008787277,0.0000034405182,0.16181462,0.00008520143,0.49094704,0.00021618788],"about_ca_topic_score_codex":0.00013542335,"about_ca_topic_score_gemma":0.00036251603,"teacher_disagreement_score":0.82076985,"about_ca_system_score_codex":0.0000016400784,"about_ca_system_score_gemma":0.000013770186,"threshold_uncertainty_score":0.9993519},"labels":[],"label_agreement":null},{"id":"W1983194690","doi":"10.1016/j.tim.2007.09.003","title":"The benefits of using diverse animal models for studying pertussis","year":2007,"lang":"en","type":"review","venue":"Trends in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Bordetella pertussis; Biology; Immunity; Whooping cough; Disease; Immunology; Innate immune system; Animal model; Immune system; Vaccination; Medicine","score_opus":0.18632997258971848,"score_gpt":0.37824903435564156,"score_spread":0.19191906176592308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983194690","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0069036116,0.9905007,0.000039123726,0.00000925069,0.0014834347,0.00039529038,0.0005525633,0.00002247858,0.000093533126],"genre_scores_gemma":[0.0017641922,0.9967931,0.00015246547,0.000007456718,0.00010571651,0.00005656285,0.00058011885,0.000043027158,0.00049735344],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978157,0.00029024397,0.00090165756,0.0004280447,0.000006106817,0.00055819016],"domain_scores_gemma":[0.99839526,0.0006669056,0.0004909157,0.00035189063,0.000082648294,0.000012381017],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005579475,0.0003942897,0.0015486213,0.00057392503,0.00029766958,0.000011445537,0.00039814727,0.0009059276,0.00011479855],"category_scores_gemma":[0.000028734126,0.00025337475,0.00051758357,0.00040370118,0.0002336818,0.000049691098,0.00021183107,0.0003873855,0.000012483878],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011815932,0.00011319751,0.00002194431,0.0004617421,0.00044984874,3.9889787e-7,0.00009228231,0.000016450442,0.005691486,0.0009199835,0.00045589596,0.9916586],"study_design_scores_gemma":[0.00076493295,0.00021939298,0.000018513309,0.00095239544,0.00056255516,0.00019747521,0.00007999792,0.000004213329,0.0001405114,0.000020483341,0.9967199,0.0003196049],"about_ca_topic_score_codex":0.00014151791,"about_ca_topic_score_gemma":0.00027842072,"teacher_disagreement_score":0.99626404,"about_ca_system_score_codex":0.00009962822,"about_ca_system_score_gemma":0.00007206201,"threshold_uncertainty_score":0.99999183},"labels":[],"label_agreement":null},{"id":"W1983795644","doi":"10.1212/wnl.0b013e31827595f7","title":"Dexamethasone and long-term survival in bacterial meningitis","year":2012,"lang":"en","type":"article","venue":"Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Dexamethasone; Medicine; Placebo; Population; Internal medicine; Meningitis; Clinical endpoint; Randomization; Randomized controlled trial; Surgery; Pediatrics; Pathology","score_opus":0.019078645589442965,"score_gpt":0.25234031348288893,"score_spread":0.23326166789344596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983795644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944247,0.0005480733,0.000011092646,0.00025883067,0.0043004276,0.00008850803,0.0000073498854,0.000037458456,0.00032357723],"genre_scores_gemma":[0.9994644,0.000086502194,0.000007924914,0.000079198995,0.00020789228,0.000013348412,0.000030887233,0.000011416955,0.00009844319],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904644,0.00026004305,0.00016142134,0.00017006957,0.0000057135353,0.00035628545],"domain_scores_gemma":[0.9996621,0.00013877884,0.000042815405,0.00012073167,0.000012336742,0.00002320721],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016607392,0.000109859146,0.00021317761,0.00009361491,0.000059480633,0.000008585408,0.000057664987,0.0002411819,0.0012109434],"category_scores_gemma":[0.000040558712,0.000102484344,0.00002455728,0.00006830494,0.000083814855,0.0001087109,0.000078171724,0.00021624229,0.00012569463],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025779504,0.00007070352,0.6015848,0.000003310707,0.000018189057,0.0000022521767,0.0000751235,7.357241e-8,0.39469406,0.0003082033,0.000052934738,0.002932571],"study_design_scores_gemma":[0.0011577703,0.00031703044,0.9806353,0.0000019280421,0.000013134366,0.00033279567,0.0000019154706,1.3777132e-7,0.006398782,0.000017556626,0.011028523,0.00009516732],"about_ca_topic_score_codex":0.00018157357,"about_ca_topic_score_gemma":0.0003110788,"teacher_disagreement_score":0.38829526,"about_ca_system_score_codex":0.0000047920257,"about_ca_system_score_gemma":0.000008028949,"threshold_uncertainty_score":0.9997021},"labels":[],"label_agreement":null},{"id":"W1983912502","doi":"10.1128/cvi.00059-06","title":"Early Appearance of Bactericidal Antibodies after Polysaccharide Challenge of Toddlers Primed with a Group C Meningococcal Conjugate Vaccine: What Is Its Role in the Maintenance of Protection?","year":2006,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Conjugate vaccine; Antibody; Vaccination; Titer; Medicine; Population; Antigen; Meningococcal vaccine; Immunoglobulin G; Immunology; Antibody titer; Immunization","score_opus":0.012386573464561403,"score_gpt":0.254592429122762,"score_spread":0.24220585565820058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983912502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98890764,0.009030669,0.000029249311,0.0011133365,0.0003083561,0.0005382077,0.00001859214,0.000016106338,0.00003787244],"genre_scores_gemma":[0.9972232,0.0024738745,0.000024431934,0.000048399645,0.000048569706,0.000077551544,0.0000068374106,0.00001415702,0.00008295157],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979254,0.00034184608,0.0010439305,0.0003500431,0.000025651392,0.000313123],"domain_scores_gemma":[0.9988012,0.00018261388,0.00050118985,0.0003284232,0.00017419537,0.000012416418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046097726,0.00022695308,0.000816268,0.00013272179,0.00005959712,0.000011801085,0.0002169544,0.00029254472,0.00008548588],"category_scores_gemma":[0.00004796657,0.00014268771,0.00012915503,0.00023062137,0.0002375548,0.00023070586,0.00010448767,0.0004069511,0.0000069168436],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0083137285,0.0012579742,0.23530866,0.0001437276,0.00047532105,0.000003623154,0.00085251976,0.000001186295,0.7415152,0.0009889202,0.000037660866,0.011101473],"study_design_scores_gemma":[0.0045944415,0.0026089153,0.95322037,0.00027461426,0.00006899419,0.000057429002,0.00037268313,0.000004185758,0.03739313,0.00021938358,0.0010171683,0.00016869843],"about_ca_topic_score_codex":0.00091432786,"about_ca_topic_score_gemma":0.00025374384,"teacher_disagreement_score":0.7179117,"about_ca_system_score_codex":0.0000061472306,"about_ca_system_score_gemma":0.000028115901,"threshold_uncertainty_score":0.5818636},"labels":[],"label_agreement":null},{"id":"W1984338589","doi":"10.1016/j.vaccine.2010.09.092","title":"Comparison of the safety and immunogenicity of an investigational and a licensed quadrivalent meningococcal conjugate vaccine in children 2–10 years of age","year":2010,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Etobicoke General Hospital; Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Medicine; Confidence interval; Immunogenicity; Randomized controlled trial; Vaccination; Meningococcal vaccine; Pediatrics; Internal medicine; Immunization; Immunology; Antigen","score_opus":0.011011417697501604,"score_gpt":0.26209090246883254,"score_spread":0.25107948477133096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984338589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999137,0.0003409613,0.0000018157755,0.00010018156,0.00012918365,0.00021607325,0.00005526616,0.0000070281185,0.000012479336],"genre_scores_gemma":[0.99975204,0.000044485005,0.000088503424,0.000008278689,0.000016264821,0.0000021157066,0.00005000443,0.000006502014,0.00003178633],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991674,0.00010871961,0.00046125278,0.00014146484,0.000016895323,0.00010427179],"domain_scores_gemma":[0.9993883,0.00007693226,0.00024575577,0.000213515,0.000058612928,0.00001688629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023159878,0.000095478994,0.00035867284,0.000079462036,0.000045228782,0.0000033087545,0.0001068622,0.00013473752,0.0002206912],"category_scores_gemma":[0.000078213656,0.00007383928,0.0000371405,0.00013134189,0.000059653066,0.000054141747,0.00009948407,0.00019984615,0.0000010334207],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002524827,0.000103687686,0.4014216,0.000008122911,0.00004675136,3.3659177e-8,0.00020530338,0.0000030199005,0.596962,0.00022560143,0.000017733068,0.0007536884],"study_design_scores_gemma":[0.0023786635,0.00017264209,0.80649847,0.000019480813,0.000029854167,0.000019936628,0.000025266672,0.00001753144,0.19033842,0.000047947724,0.00039610677,0.000055671935],"about_ca_topic_score_codex":0.0009846155,"about_ca_topic_score_gemma":0.0007348144,"teacher_disagreement_score":0.40662357,"about_ca_system_score_codex":0.000004408301,"about_ca_system_score_gemma":0.000026841939,"threshold_uncertainty_score":0.30110782},"labels":[],"label_agreement":null},{"id":"W1985457542","doi":"10.1371/journal.pone.0097020","title":"Characterization of Nontypable Haemophilus influenzae Isolates Recovered from Adult Patients with Underlying Chronic Lung Disease Reveals Genotypic and Phenotypic Traits Associated with Persistent Infection","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Instituto de Salud Carlos III; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Haemophilus influenzae; Biology; Microbiology; Genotype; Virology; Gene; Genetics","score_opus":0.017493815598764718,"score_gpt":0.19728881688852137,"score_spread":0.17979500128975665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985457542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988307,0.00013496864,0.00018686484,0.000040432813,0.0000734382,0.00044607194,0.00020881029,0.000057887763,0.000020827238],"genre_scores_gemma":[0.99839634,0.00005442679,0.000029390612,0.000035720066,0.000031838623,0.00003256794,0.0012966495,0.00002415833,0.000098921955],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991308,0.00013651921,0.00024098478,0.00025913052,0.000031889947,0.00020066669],"domain_scores_gemma":[0.9991641,0.00006592725,0.000279058,0.0001449407,0.0003092013,0.000036774578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000061632745,0.00017276991,0.00032599355,0.000084298284,0.00019475321,0.000025054364,0.000046682817,0.00013953548,0.000113665024],"category_scores_gemma":[0.00010327012,0.00014060982,0.000035487235,0.00013682994,0.00005442033,0.00023995554,0.000024140722,0.00012728378,0.000008684175],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060171494,0.0006974406,0.34145114,0.00008929378,0.00090952916,5.5924048e-8,0.0001398739,0.000015039335,0.65548426,0.000029355822,0.0000025912284,0.0005797095],"study_design_scores_gemma":[0.0031704546,0.00069345837,0.9871151,0.00069065014,0.0006892925,3.783793e-7,0.0000057248785,0.00031520615,0.0070448914,0.000053081003,0.000013728982,0.0002080556],"about_ca_topic_score_codex":0.0002291006,"about_ca_topic_score_gemma":0.00024144749,"teacher_disagreement_score":0.64843935,"about_ca_system_score_codex":0.00009144043,"about_ca_system_score_gemma":0.000037757425,"threshold_uncertainty_score":0.5733902},"labels":[],"label_agreement":null},{"id":"W1986139002","doi":"10.1016/j.pedneo.2012.10.004","title":"Citrobacter freundii Brain Abscess in a Preterm Infant: A Case Report and Literature Review","year":2012,"lang":"en","type":"review","venue":"Pediatrics & Neonatology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre; University of Calgary","funders":"","keywords":"Medicine; Citrobacter freundii; Citrobacter; Brain abscess; Meningitis; Abscess; Neonatal meningitis; Pediatrics; Surgery; Klebsiella pneumoniae; Enterobacteriaceae","score_opus":0.02104886080703475,"score_gpt":0.3099884041113888,"score_spread":0.288939543304354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986139002","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021644349,0.99342644,0.000003851603,0.00020266336,0.0025663092,0.0011839396,0.00022664439,0.00007076057,0.00015495229],"genre_scores_gemma":[0.00018418909,0.99700826,0.000037859936,0.00020531724,0.0004059373,0.0003357517,0.0012122744,0.00006440559,0.000546029],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99619687,0.0008052508,0.0014332655,0.00080248655,0.000025025662,0.0007370805],"domain_scores_gemma":[0.99751085,0.00070089544,0.0008796222,0.00070700137,0.00012177263,0.00007986331],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0007470304,0.0006982687,0.002727894,0.00055229635,0.00014430295,0.00004679172,0.00026617027,0.0018853421,0.000383099],"category_scores_gemma":[0.00041053226,0.0005603501,0.00037507096,0.000886179,0.00012005039,0.00019327344,0.00032111752,0.0015532039,0.00013567547],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037705962,0.0002309552,0.0019106405,0.10114851,0.00038789294,0.03776821,0.00032609727,9.963943e-9,0.0000058458427,0.00037610924,0.008888672,0.84891933],"study_design_scores_gemma":[0.00027288753,0.000030107029,0.000037881502,0.0038247872,0.0008986717,0.3672245,0.0000019733488,1.8636948e-8,1.9051886e-7,0.00001818992,0.6273508,0.00033995163],"about_ca_topic_score_codex":0.00019119156,"about_ca_topic_score_gemma":0.00026527242,"teacher_disagreement_score":0.8485794,"about_ca_system_score_codex":0.00006667806,"about_ca_system_score_gemma":0.00016912885,"threshold_uncertainty_score":0.9996848},"labels":[],"label_agreement":null},{"id":"W1986434837","doi":"10.1136/bmj.h308","title":"Do we need a new approach to making vaccine recommendations?","year":2015,"lang":"en","type":"article","venue":"BMJ","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Public Health Ontario","funders":"","keywords":"Meningococcal vaccine; Vaccine safety; Medicine; Political science; Engineering ethics; Public relations; Immunology; Engineering; Immunization","score_opus":0.08562601539215249,"score_gpt":0.34013757534766736,"score_spread":0.2545115599555149,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986434837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47171348,0.0052277115,0.030213883,0.25620478,0.021277165,0.0035345745,0.00008167405,0.0010721805,0.21067455],"genre_scores_gemma":[0.9510839,0.00004918673,0.008995984,0.0008242877,0.00095326087,0.00010253237,0.00013623161,0.000031374886,0.03782323],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993895,0.00007700366,0.00019182931,0.00016782166,0.000007960322,0.00016583681],"domain_scores_gemma":[0.99960333,0.00002518968,0.0000538838,0.00022556118,0.000055792938,0.00003623952],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00023208279,0.00009082529,0.00014430934,0.00010138576,0.00007983152,0.000028929184,0.000099457946,0.000103547725,0.00091390696],"category_scores_gemma":[0.000104347215,0.00007746598,0.00003582295,0.00019275634,0.000004460937,0.00007270702,0.00007368162,0.00009688712,0.0019020839],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001009158,0.00007782474,0.0006219996,0.0000029971627,0.000049549715,1.3999622e-7,0.00046466943,0.00001117982,0.01697552,0.0017605132,0.9515452,0.028389504],"study_design_scores_gemma":[0.00095562596,0.00006859144,0.0010057201,0.0000214098,0.00001608064,0.00008279262,0.00039600645,0.0000034002762,0.0010589225,0.00035491973,0.9959194,0.00011713356],"about_ca_topic_score_codex":0.0001431945,"about_ca_topic_score_gemma":0.000021824202,"teacher_disagreement_score":0.47937045,"about_ca_system_score_codex":0.00002676963,"about_ca_system_score_gemma":0.000055619712,"threshold_uncertainty_score":0.9999994},"labels":[],"label_agreement":null},{"id":"W1986797742","doi":"10.1016/j.carres.2011.05.020","title":"Expression of a new disialyllacto structure in the lipopolysaccharide of non-typeable Haemophilus influenzae","year":2011,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Medical Research Council; Vetenskapsrådet","keywords":"Heptose; Chemistry; Haemophilus influenzae; Oligosaccharide; Lipopolysaccharide; Strain (injury); Mutant; Lipid A; Carbohydrate conformation; Galactose; Nuclear magnetic resonance spectroscopy; Stereochemistry; Biochemistry; Microbiology; Gene; Biology","score_opus":0.07229282964230412,"score_gpt":0.33088058496534756,"score_spread":0.25858775532304346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986797742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980253,0.0005319442,0.0000069962643,0.000054062544,0.00023257149,0.000264221,0.000018126231,0.000007409615,0.000859352],"genre_scores_gemma":[0.99960345,0.00006336255,0.000030567488,0.000008661666,0.000049813014,0.000010204506,0.0000113355845,0.000010561326,0.00021203766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998828,0.00032609567,0.00030538358,0.00018033058,0.000048796435,0.0003113946],"domain_scores_gemma":[0.9991659,0.00012867352,0.0000862585,0.0004355203,0.00016134801,0.000022327426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053257495,0.00010394497,0.00024738986,0.00029212693,0.00008793181,0.000009115046,0.00038089318,0.00021160509,0.0006510428],"category_scores_gemma":[0.00012239354,0.00006600557,0.000058954487,0.00047708588,0.00016487695,0.00009463729,0.00013704973,0.00042779165,0.000023515555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021748233,0.00007960387,0.0044716815,0.00002661357,0.000021494974,0.0000015025006,0.0027579498,0.0000025922398,0.9905396,0.0004912575,0.000736718,0.00065348606],"study_design_scores_gemma":[0.0005791436,0.000190122,0.014079443,0.00006482396,0.000008940512,0.000006672815,0.0004910995,0.0000022791262,0.9823346,0.0013702383,0.00080457993,0.00006801412],"about_ca_topic_score_codex":0.009289205,"about_ca_topic_score_gemma":0.00041652055,"teacher_disagreement_score":0.009607761,"about_ca_system_score_codex":0.000017691442,"about_ca_system_score_gemma":0.0001385463,"threshold_uncertainty_score":0.997308},"labels":[],"label_agreement":null},{"id":"W1987085349","doi":"10.1007/s00247-005-0019-8","title":"Serial diffusion-weighted MRI correlates with clinical course and treatment response in children with intracranial pus collections","year":2005,"lang":"en","type":"article","venue":"Pediatric Radiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Effective diffusion coefficient; Neuroradiology; Sepsis; Diffusion MRI; Magnetic resonance imaging; Radiology; Neurology; Nuclear medicine; Internal medicine","score_opus":0.006496157138399209,"score_gpt":0.24311137792983528,"score_spread":0.23661522079143607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987085349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973672,0.00077211997,0.000058331214,0.00047173578,0.00070847245,0.00047187164,0.000046284695,0.000062185354,0.000041795967],"genre_scores_gemma":[0.9962894,0.0020881766,0.00022309354,0.000032181288,0.0007629182,0.000104903054,0.00006499801,0.000018749253,0.00041563192],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982747,0.00056655623,0.00040200137,0.0003973061,0.000012739259,0.00034671446],"domain_scores_gemma":[0.99909633,0.0004799153,0.00014052808,0.00019180466,0.000042057396,0.000049358845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023461497,0.00022791793,0.00047097105,0.00022014591,0.00026074273,0.000016796437,0.00007599598,0.00034101578,0.0003916141],"category_scores_gemma":[0.00003631404,0.00014961451,0.000046413148,0.00037060637,0.00018443455,0.00007780066,0.000027191698,0.00029297845,0.000055624983],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011858921,0.00058709184,0.9824044,8.722816e-7,0.00022297053,0.0000066793896,0.00010606965,0.000044472235,0.0007921409,0.000029958612,0.0009602077,0.002986223],"study_design_scores_gemma":[0.011309661,0.004183803,0.978559,0.000002877733,0.00029059633,0.0025354226,0.00003993039,0.00004397218,0.00004553909,0.00001418115,0.0027519024,0.00022310908],"about_ca_topic_score_codex":0.0010150693,"about_ca_topic_score_gemma":0.0027343426,"teacher_disagreement_score":0.0038453878,"about_ca_system_score_codex":0.0001064285,"about_ca_system_score_gemma":0.00030277215,"threshold_uncertainty_score":0.6101103},"labels":[],"label_agreement":null},{"id":"W1987205549","doi":"10.2165/00019053-200119050-00009","title":"Economic Evaluation of a New Acellular Vaccine for Pertussis in Canada","year":2001,"lang":"en","type":"article","venue":"PharmacoEconomics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Golder Associates (Canada); Institut National de Santé Publique du Québec; University of Toronto; SickKids Foundation; Kingston Health Sciences Centre; Hospital for Sick Children; McMaster University; PharmIdeas (Canada)","funders":"Health Canada","keywords":"Medicine; Whooping cough; Pertussis vaccine; Vaccination; Health economics; Cohort; Public health; Pediatrics; Health care; Incidence (geometry); Environmental health; Immunology; Immunization; Nursing; Internal medicine","score_opus":0.03546658025033926,"score_gpt":0.307517927745233,"score_spread":0.27205134749489374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987205549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99668986,0.00072881224,0.000037232287,0.00050025235,0.0014227483,0.0003145376,0.000047772875,0.000006339527,0.00025242817],"genre_scores_gemma":[0.99915355,0.00024581052,0.000026084892,0.000078121164,0.00009109417,0.000035581128,0.00007067686,0.000010116339,0.000288971],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993461,0.000039873652,0.0003031465,0.0001471784,0.0000048562338,0.00015889037],"domain_scores_gemma":[0.9996706,0.00006057415,0.00011208287,0.00010490282,0.000033483248,0.00001831199],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002689741,0.00008867581,0.00020090817,0.00006889709,0.00003166352,0.0000044425024,0.000086340784,0.000047159596,0.0030154388],"category_scores_gemma":[0.0000143463585,0.00009320851,0.000045573943,0.000027889375,0.0000048626757,0.00008199222,0.000017749573,0.000054880897,0.000032449283],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010832786,0.00014153449,0.14315194,0.000031039544,0.00047709764,4.2414484e-7,0.0002710907,0.011455556,0.6463786,0.00048104936,0.058569726,0.13795869],"study_design_scores_gemma":[0.017638236,0.000101592865,0.03471591,0.000016676875,0.0003132931,0.000043409753,0.0002398944,0.014281742,0.30791888,0.00056246296,0.62372583,0.0004421011],"about_ca_topic_score_codex":0.63196343,"about_ca_topic_score_gemma":0.8033709,"teacher_disagreement_score":0.5651561,"about_ca_system_score_codex":0.0005112822,"about_ca_system_score_gemma":0.0010866475,"threshold_uncertainty_score":0.99789596},"labels":[],"label_agreement":null},{"id":"W1987588940","doi":"10.1007/s15010-005-5074-4","title":"Peritonitis Due to Neisseria mucosa in an Adolescent Receiving Peritoneal Dialysis","year":2005,"lang":"en","type":"article","venue":"Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Children's Hospital","funders":"","keywords":"Peritoneal dialysis; Medicine; Peritonitis; Ceftriaxone; Gentamicin; Antibiotics; Internal medicine; Gastroenterology; Surgery; Microbiology; Biology","score_opus":0.014412364408777759,"score_gpt":0.2692682507837116,"score_spread":0.25485588637493384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987588940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970655,0.00006987365,0.00015597191,0.00040088178,0.0016755916,0.00019050791,0.0000075350654,0.0001282149,0.00030593772],"genre_scores_gemma":[0.99904317,0.000038127277,0.000074003205,0.000108182045,0.00043395642,0.000058030873,0.000055715787,0.000016547108,0.00017225495],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990325,0.00016723677,0.0002548993,0.00026989763,0.000010186871,0.00026530918],"domain_scores_gemma":[0.99964076,0.000019935738,0.000049455917,0.00019412907,0.00006106573,0.000034663586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015970937,0.00014328567,0.0002127461,0.0002628367,0.00018273022,0.000052446318,0.000059504626,0.0001901329,0.0009013389],"category_scores_gemma":[0.00004418872,0.0001468933,0.000065988235,0.00030908108,0.000020386691,0.00032159188,0.00003631348,0.00020454844,0.00053285353],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000801746,0.0003597633,0.11083401,0.000007509173,0.00002209199,0.0000010814998,0.00052884733,0.00011518793,0.7915574,0.00004772542,0.00032814255,0.09611808],"study_design_scores_gemma":[0.0005704171,0.00022272226,0.8780077,0.000036790712,0.00001877586,0.00012711473,0.000054545944,0.00002788957,0.04311779,0.000010551371,0.07759202,0.00021365708],"about_ca_topic_score_codex":0.0022723735,"about_ca_topic_score_gemma":0.011930042,"teacher_disagreement_score":0.7671737,"about_ca_system_score_codex":0.00013669414,"about_ca_system_score_gemma":0.00002193425,"threshold_uncertainty_score":0.9869029},"labels":[],"label_agreement":null},{"id":"W1988238187","doi":"10.1017/s1466252309990211","title":"Vaccination for respiratory immunity: latest developments","year":2009,"lang":"en","type":"review","venue":"Animal Health Research Reviews","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Chemicals (Canada); Novartis (Canada)","funders":"","keywords":"Immune system; Vaccination; Antigen; Immunology; Immunization; Immunity; Flexibility (engineering); Medicine; Biology; Computational biology","score_opus":0.5407267976440211,"score_gpt":0.5550713407818617,"score_spread":0.014344543137840615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988238187","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000011014782,0.99210507,0.0000058643373,0.00026198622,0.00054714154,0.0064003286,0.00008439666,0.00006289603,0.00052128924],"genre_scores_gemma":[0.000005275149,0.99470496,0.00016091882,0.00019164516,0.00025454586,0.001702217,0.0009280721,0.00005839256,0.001993959],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9920347,0.004333149,0.0017866138,0.0006330146,0.000049580387,0.0011629639],"domain_scores_gemma":[0.99731845,0.00078801916,0.0007087448,0.0006277151,0.00044974207,0.00010731587],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.009846109,0.00047068333,0.002616242,0.0007057002,0.001251131,0.000073291885,0.00057763705,0.00068632484,0.00041509533],"category_scores_gemma":[0.0011182224,0.00035405692,0.00050641113,0.0009184492,0.000052446685,0.0001498821,0.00017811432,0.0015218414,0.0024770359],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028859055,0.00012018701,0.0000017024505,0.015390973,0.000058061596,2.4138495e-7,0.000023414152,9.212771e-10,0.000028146918,0.00046526876,0.08225171,0.9016314],"study_design_scores_gemma":[0.0003474433,0.0013138107,0.00014112871,0.009158972,0.000055487744,0.000026065314,0.0000059102063,2.853772e-8,0.000005031579,0.000027823744,0.9886489,0.00026942257],"about_ca_topic_score_codex":0.00012759201,"about_ca_topic_score_gemma":0.00011186866,"teacher_disagreement_score":0.90639716,"about_ca_system_score_codex":0.0005822456,"about_ca_system_score_gemma":0.0017298586,"threshold_uncertainty_score":0.99989116},"labels":[],"label_agreement":null},{"id":"W1988340821","doi":"10.1007/s00134-012-2792-9","title":"Delayed cerebral thrombosis in bacterial meningitis: a prospective cohort study","year":2012,"lang":"en","type":"article","venue":"Intensive Care Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Anesthesiology; Pain medicine; Prospective cohort study; Thrombosis; Meningitis; Cohort study; Cohort; Bacterial meningitis; Intensive care medicine; Emergency medicine; Anesthesia; Pediatrics; Internal medicine","score_opus":0.01785328208533961,"score_gpt":0.2883036744657811,"score_spread":0.2704503923804415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988340821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899649,0.0014068134,0.0000082625775,0.0002990822,0.0061536864,0.0009997336,0.00002406099,0.00007424384,0.0010692301],"genre_scores_gemma":[0.99870014,0.000023423392,0.0000054219367,0.00019783947,0.00054301904,0.00016975563,0.00017438285,0.000021660902,0.00016434932],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987062,0.0001856487,0.00036566943,0.00029226296,0.000029561716,0.00042062413],"domain_scores_gemma":[0.99842393,0.000091116475,0.000101040954,0.00023978394,0.0011041833,0.00003996245],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021774744,0.000226408,0.0005524517,0.00018283124,0.00010914149,0.000007805084,0.000105022795,0.00016433463,0.0021851826],"category_scores_gemma":[0.00059143774,0.00016891217,0.000054607328,0.00022245182,0.00015462811,0.00014986271,0.00008432551,0.00029637988,0.000165947],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022160052,0.00012119663,0.86935925,0.0000054190323,0.00031014308,0.0000028842926,0.016722895,9.27548e-8,0.10825439,0.000055973007,0.0046274276,0.00031872944],"study_design_scores_gemma":[0.003550731,0.0012704047,0.9268143,0.00007108451,0.0001775973,0.00007350633,0.057735775,1.0789818e-7,0.0064888746,0.00001136841,0.0036231438,0.00018311075],"about_ca_topic_score_codex":0.0024928062,"about_ca_topic_score_gemma":0.0007591358,"teacher_disagreement_score":0.10176551,"about_ca_system_score_codex":0.00015204231,"about_ca_system_score_gemma":0.000027411013,"threshold_uncertainty_score":0.99872696},"labels":[],"label_agreement":null},{"id":"W1988444885","doi":"10.1016/j.ijid.2012.05.074","title":"The evolution of pertussis vaccines and vaccination programs","year":2012,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Vaccination; Immunization; Whooping cough; Diphtheria; Bordetella pertussis; Reactogenicity; Public health; Environmental health; Tetanus; Disease burden; Pediatrics; Immunology; Population; Antigen","score_opus":0.007352205741080421,"score_gpt":0.25534144182298535,"score_spread":0.24798923608190493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988444885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875824,0.00820245,0.00025166635,0.00027510306,0.0033821103,0.000070004404,0.000009252006,0.000014663102,0.00021237557],"genre_scores_gemma":[0.9990041,0.0005406596,0.00000763464,0.000010036455,0.00034315538,0.000005536746,0.0000069598923,0.0000057329653,0.000076171695],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993827,0.00008855478,0.0003223704,0.00005046011,0.00003955435,0.000116409414],"domain_scores_gemma":[0.9987906,0.00016673926,0.0003691892,0.000061635445,0.00058491214,0.000026892052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020350584,0.00007816226,0.00012401202,0.00013742434,0.00012405624,0.000033914595,0.000118279706,0.00005329498,0.00009984537],"category_scores_gemma":[0.0002732124,0.00004876344,0.000099851626,0.000075345975,0.000039532464,0.0003329352,0.000039343508,0.00008420189,0.000006570893],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019327077,0.0004584022,0.91531706,0.000008200737,0.00050001283,3.4844882e-7,0.00017359959,0.0000040224413,0.016862601,0.0042052395,0.00078464125,0.061492633],"study_design_scores_gemma":[0.0012326153,0.00027272585,0.9797908,0.00004092674,0.00012994089,0.0005418946,0.00038683732,0.0000037977911,0.0024242392,0.001033048,0.014058202,0.00008496735],"about_ca_topic_score_codex":0.000071755705,"about_ca_topic_score_gemma":0.000020486,"teacher_disagreement_score":0.06447378,"about_ca_system_score_codex":0.00009491379,"about_ca_system_score_gemma":0.000048144953,"threshold_uncertainty_score":0.19885153},"labels":[],"label_agreement":null},{"id":"W1988713449","doi":"10.1016/s1672-0229(10)60018-6","title":"A Novel Interpretation of Structural Dot Plots of Genomes Derived from the Analysis of Two Strains of <i>Neisseria Meningitidis</i>","year":2010,"lang":"en","type":"article","venue":"Genomics Proteomics & Bioinformatics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; Canadian Science Centre for Human and Animal Health; University of Manitoba; Public Health Agency of Canada","funders":"Health Canada; Mitacs; Public Health Agency; Public Health Agency of Canada","keywords":"Neisseria meningitidis; Virulence; Genome; Biology; Gene; Locus (genetics); Genetics; Neisseria; Whole genome sequencing; Pathogenicity island; Strain (injury); Meningococcal disease; Bacteria","score_opus":0.010512048660131116,"score_gpt":0.2422288098212799,"score_spread":0.23171676116114878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988713449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911846,0.000095571755,0.0062541096,0.000018757146,0.0003705757,0.00042257068,0.001592639,0.000010050188,0.00005112772],"genre_scores_gemma":[0.97222394,0.000036412723,0.027271515,0.0000102159265,0.000016960223,0.000008527538,0.00041541382,0.0000112504695,0.0000057862358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857306,0.00003482084,0.001097188,0.000106409636,0.000025965233,0.00016255345],"domain_scores_gemma":[0.9979052,0.00010117813,0.0012869792,0.00042968083,0.00026101113,0.000015962265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024457564,0.0001696307,0.0005923736,0.00025220824,0.00006666052,0.000011620891,0.00034060574,0.00017148297,0.000102996695],"category_scores_gemma":[0.00006269627,0.00012796967,0.00023687458,0.00037490818,0.00026812628,0.00012929202,0.00012313668,0.0001982319,0.0000021337123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013632159,0.000043707165,0.0031363894,0.00004492662,0.001192428,1.0096578e-8,0.0052023013,0.00057174667,0.9866518,0.0010635066,0.0000024204764,0.0019544428],"study_design_scores_gemma":[0.0012258736,0.00013740956,0.03395768,0.00002629461,0.0009455625,0.000005869995,0.0009903503,0.008100105,0.9540586,0.00034249376,0.00004898551,0.00016079105],"about_ca_topic_score_codex":0.0005287269,"about_ca_topic_score_gemma":0.00047788158,"teacher_disagreement_score":0.032593213,"about_ca_system_score_codex":0.000016969732,"about_ca_system_score_gemma":0.00011507426,"threshold_uncertainty_score":0.5218452},"labels":[],"label_agreement":null},{"id":"W1988810265","doi":"10.1179/2047773214y.0000000126","title":"Global practices of meningococcal vaccine use and impact on invasive disease","year":2014,"lang":"en","type":"review","venue":"Pathogens and Global Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"World Health Organization","keywords":"Meningococcal vaccine; Meningococcal disease; Vaccination; Medicine; Immunization; Meningitis; Neisseria meningitidis; Conjugate vaccine; Incidence (geometry); Disease burden; Environmental health; Burden of disease; Meningococcal meningitis; Virology; Immunology; Pediatrics; Population; Antigen; Biology","score_opus":0.04762164072913224,"score_gpt":0.39631272104758525,"score_spread":0.34869108031845303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988810265","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.045192435,0.9487303,0.0000073504984,0.000088013134,0.00046468488,0.0006228357,0.004819935,0.000028486873,0.000045962068],"genre_scores_gemma":[0.01600136,0.98328364,0.00002727381,0.00008481777,0.000100868274,0.000022827277,0.0004427742,0.000013955788,0.000022510589],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978793,0.0006167058,0.0006061025,0.00048530608,0.000024431469,0.00038813546],"domain_scores_gemma":[0.9978867,0.00032222774,0.0012094604,0.00031540755,0.000082466315,0.00018371144],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033939013,0.00043270655,0.0016556991,0.00006494608,0.00019941753,0.00004643547,0.000098128075,0.0003128682,0.00005255237],"category_scores_gemma":[0.00035739693,0.00028632185,0.00024901566,0.00022009398,0.00006203551,0.00009753644,0.0001228102,0.0001829767,0.00002080457],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000466535,0.00033255422,0.014949429,0.009668748,0.0006534279,0.0000067614205,0.000021797288,5.99103e-7,0.000015747759,0.0026896535,0.0036537703,0.967541],"study_design_scores_gemma":[0.0008016185,0.0013730964,0.05084596,0.0037662864,0.00073425646,0.00039089733,0.000012478942,6.537278e-7,5.21092e-7,0.000112748756,0.94161236,0.00034910924],"about_ca_topic_score_codex":0.0016010697,"about_ca_topic_score_gemma":0.00026914082,"teacher_disagreement_score":0.9671919,"about_ca_system_score_codex":0.00015895031,"about_ca_system_score_gemma":0.0005660817,"threshold_uncertainty_score":0.9999589},"labels":[],"label_agreement":null},{"id":"W1989011168","doi":"10.1016/j.vaccine.2009.04.063","title":"Global epidemiology of meningococcal disease","year":2009,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":753,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; European Commission; National Institute for Health and Care Research; Wellcome Trust; World Health Organization","keywords":"Epidemiology; Meningococcal disease; Incidence (geometry); Outbreak; Meningitis; Medicine; Population; Disease; Meningococcal vaccine; Neisseria meningitidis; Disease burden; Vaccination; Virology; Environmental health; Immunology; Pediatrics; Biology; Immunization; Internal medicine","score_opus":0.050301495314997155,"score_gpt":0.3556197474752534,"score_spread":0.3053182521602562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989011168","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001913408,0.9975309,0.000037943657,0.00006761681,0.0011869782,0.00038117412,0.00029207006,0.00007166332,0.00024033507],"genre_scores_gemma":[0.00017558939,0.9980782,0.000046880425,0.000030643852,0.00019893188,0.000021312206,0.00076065894,0.000017787199,0.000669957],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977286,0.000541531,0.0009661824,0.00039385608,0.0000072317944,0.0003626279],"domain_scores_gemma":[0.99855334,0.00029899096,0.0005449735,0.00049098977,0.000059246133,0.000052491607],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029256917,0.00038456367,0.0024121033,0.0001313738,0.00007013054,0.0000021794078,0.00027468748,0.00057542603,0.0010846627],"category_scores_gemma":[0.00035089382,0.000274046,0.0006163774,0.00031098488,0.000019289377,0.00003585488,0.00010088851,0.0002417266,0.0003580261],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007119036,0.00016322435,0.0013621532,0.0018309392,0.00039983634,0.0000021941796,0.0000021064382,4.6590586e-7,0.000008714169,0.0030227555,0.011278012,0.98185843],"study_design_scores_gemma":[0.00041077216,0.00014464791,0.002780711,0.001631534,0.00088549627,0.000101281796,7.3176204e-7,1.0764106e-7,0.0000012938424,0.00030589674,0.9935135,0.0002240208],"about_ca_topic_score_codex":0.000083146726,"about_ca_topic_score_gemma":0.000011246808,"teacher_disagreement_score":0.9822355,"about_ca_system_score_codex":0.00005800012,"about_ca_system_score_gemma":0.00015257961,"threshold_uncertainty_score":0.99997115},"labels":[],"label_agreement":null},{"id":"W1989465050","doi":"10.1016/j.vaccine.2013.09.048","title":"Applicability of the Brighton Collaboration Case Definition for seizure after immunization in active and passive surveillance in Canada","year":2013,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Stollery Children's Hospital; University of British Columbia; Public Health Agency of Canada; Alberta Children's Hospital; University of Calgary; BC Children's Hospital; Dalhousie University; Izaak Walton Killam Health Centre","funders":"","keywords":"Medicine; Immunization; Seriousness; Vaccination; Adverse effect; Pediatrics; Public health surveillance; Active immunization; Family medicine; Public health; Internal medicine; Immunology","score_opus":0.0048677428234900795,"score_gpt":0.19742981481211944,"score_spread":0.19256207198862935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989465050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847674,0.00008847043,0.000021450405,0.00053378363,0.00015411362,0.000609157,0.00010080525,0.0000030330932,0.000012426766],"genre_scores_gemma":[0.9997276,0.00001659207,0.000014042949,0.000023739396,0.000007984337,0.00013485915,0.00005698127,0.0000037632672,0.000014405239],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995464,0.00008846964,0.00017339126,0.0001035091,0.000005685426,0.000082544844],"domain_scores_gemma":[0.9995884,0.000100900455,0.00007683464,0.00010769429,0.000121431425,0.000004750196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000043160584,0.00006003196,0.00012647035,0.000032561835,0.00004181765,0.0000046634373,0.000026111416,0.00006621311,0.00009044128],"category_scores_gemma":[0.000049382787,0.00004300839,0.000010309267,0.00019712772,0.0000065498552,0.000077662975,0.000019045365,0.00006152565,8.653351e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006594199,0.00015504961,0.7248305,0.00008515173,0.00004327183,0.0000029142986,0.0006513319,0.000047412937,0.26305845,0.00038852755,0.00077493803,0.009303031],"study_design_scores_gemma":[0.0011705625,0.000034293367,0.96923786,0.000013377012,0.0000046123264,0.000046408142,0.0004216599,0.00003108082,0.028170627,0.00024714743,0.00056226103,0.00006011525],"about_ca_topic_score_codex":0.60030824,"about_ca_topic_score_gemma":0.9540446,"teacher_disagreement_score":0.3537363,"about_ca_system_score_codex":0.00009615849,"about_ca_system_score_gemma":0.00010397886,"threshold_uncertainty_score":0.40235332},"labels":[],"label_agreement":null},{"id":"W1989491685","doi":"10.1016/j.vaccine.2015.02.060","title":"Naturally occurring bactericidal antibodies specific for Haemophilus influenzae Lipooligosaccharide are present in healthy adult individuals","year":2015,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; NOSM University; Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Haemophilus influenzae; Microbiology; Antibody; Biology; Pathogen; Immunology; Immune system; Pasteurellaceae; Population; Antigen; Immunogenicity; Otitis; Virulence; Virology; Medicine; Antibiotics; Gene","score_opus":0.03505079148764213,"score_gpt":0.29132608403433086,"score_spread":0.25627529254668874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989491685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917541,0.00316379,0.000031719555,0.0016153902,0.0024658162,0.0006268518,0.00016498545,0.000110663714,0.00006669373],"genre_scores_gemma":[0.9981933,0.00021008265,0.00024053435,0.0004726657,0.00045040646,0.000059001755,0.00018133751,0.000028752806,0.00016390835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99839556,0.00010367461,0.00054908165,0.00039517932,0.000027996259,0.00052850676],"domain_scores_gemma":[0.9989888,0.00012306556,0.00023361528,0.0003104668,0.00028156437,0.000062503444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028509577,0.00026807404,0.0004993618,0.0003110041,0.00015160069,0.000050564577,0.00023319692,0.00026467338,0.0001195002],"category_scores_gemma":[0.00018865196,0.00022847802,0.00009300876,0.0002645291,0.000015095982,0.00025222334,0.00014814768,0.0003060452,0.00014395351],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025371884,0.00052614714,0.8153432,0.00013933181,0.00024399748,0.000007624294,0.0010576517,0.00007895217,0.10892717,0.00076183013,0.06516128,0.0052156495],"study_design_scores_gemma":[0.008856981,0.00076841126,0.62514824,0.00015017159,0.000036115616,0.00011362866,0.0004758279,0.000011781936,0.020828094,0.0003886661,0.34271494,0.00050712115],"about_ca_topic_score_codex":0.0005026102,"about_ca_topic_score_gemma":0.00035318526,"teacher_disagreement_score":0.27755368,"about_ca_system_score_codex":0.00008030682,"about_ca_system_score_gemma":0.00006618131,"threshold_uncertainty_score":0.9317063},"labels":[],"label_agreement":null},{"id":"W1990033381","doi":"10.1111/j.1462-5822.2007.00947.x","title":"The specific innate immune receptor CEACAM3 triggers neutrophil bactericidal activities via a Syk kinase-dependent pathway","year":2007,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Syk; Biology; Innate immune system; Immunoreceptor tyrosine-based activation motif; Cell biology; Microbiology; LYN; Degranulation; Opsonin; Immune system; Phagocytosis; Tyrosine kinase; Signal transduction; Receptor; Immunology; Biochemistry","score_opus":0.008064915189092017,"score_gpt":0.19783420590154005,"score_spread":0.18976929071244802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990033381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97967404,0.009139727,0.00073296623,0.0003585598,0.008810925,0.0004491736,0.00009725721,0.00018116702,0.00055621006],"genre_scores_gemma":[0.99302197,0.00072687474,0.00004543513,0.00008433472,0.00037675272,0.000032054573,0.00053288846,0.000059863974,0.0051198355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99708295,0.00048280926,0.0007608386,0.0005869771,0.000017624094,0.0010687899],"domain_scores_gemma":[0.9984558,0.0003762769,0.00034048886,0.0006665097,0.00011013731,0.00005073614],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00093566463,0.0004557036,0.0005626086,0.00020936289,0.000926655,0.00006679495,0.0005149699,0.0006710467,0.0013448684],"category_scores_gemma":[0.00002953455,0.00033092246,0.0002914439,0.00026218215,0.0006036797,0.00011810315,0.0002313309,0.00072870805,0.0014082616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062161096,0.00016278228,0.00013798758,0.000009654421,0.00021477226,0.000011431231,0.00016413513,7.956569e-7,0.98515064,0.00050897006,0.0016380457,0.011379179],"study_design_scores_gemma":[0.00081898103,0.00020161187,0.00042634166,0.000008599922,0.000018194427,0.00019996907,0.00017991595,1.3189685e-7,0.57484245,0.00002773225,0.42303434,0.00024174953],"about_ca_topic_score_codex":0.0001401848,"about_ca_topic_score_gemma":0.000067736335,"teacher_disagreement_score":0.42139632,"about_ca_system_score_codex":0.00014990516,"about_ca_system_score_gemma":0.00006661703,"threshold_uncertainty_score":0.9999143},"labels":[],"label_agreement":null},{"id":"W1990428205","doi":"10.1177/08830738030180060601","title":"Acute Transverse Myelitis in Children: Clinical Course and Prognostic Factors","year":2003,"lang":"en","type":"article","venue":"Journal of Child Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Fleurimont; Université de Sherbrooke","funders":"","keywords":"Medicine; Sphincter; Acute Transverse Myelitis; Myelitis; Transverse myelitis; Surgery; Pediatrics; Spinal cord; Anesthesia","score_opus":0.011011982922678345,"score_gpt":0.2668160213038263,"score_spread":0.25580403838114796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990428205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933881,0.0007501702,0.0000094337265,0.0039974186,0.0015725452,0.00011952307,0.000010721857,0.000008619557,0.00014344457],"genre_scores_gemma":[0.99819463,0.00080891594,0.000005435107,0.00086931937,0.00008025661,0.0000010576925,0.000004276494,0.0000103438615,0.00002576303],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998537,0.0005025896,0.00056808017,0.00015829722,0.000013046709,0.00022099055],"domain_scores_gemma":[0.9993788,0.00020784543,0.00023037751,0.000099317636,0.000044941014,0.000038705984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031043266,0.00013068788,0.00040323182,0.0001373334,0.000070822025,0.000008764987,0.00008776336,0.00027571176,0.00028197517],"category_scores_gemma":[0.00016342997,0.000101118145,0.00012380254,0.00008981942,0.00014482155,0.000097084725,0.0000133111835,0.00075277576,0.000010663932],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028027015,0.00032803064,0.9936525,0.0000015679108,0.00025912034,0.0000239147,0.000052512278,0.0000029138105,0.0026546167,0.00039204504,0.0010537517,0.0012987137],"study_design_scores_gemma":[0.0030851616,0.0015642165,0.95284235,0.0000088362885,0.00014106873,0.0074945153,0.000007025762,2.2496661e-7,0.0011500247,0.00010132656,0.033514466,0.00009078959],"about_ca_topic_score_codex":0.000007048914,"about_ca_topic_score_gemma":0.000015398056,"teacher_disagreement_score":0.0408102,"about_ca_system_score_codex":0.0000034942964,"about_ca_system_score_gemma":0.00004394187,"threshold_uncertainty_score":0.41234782},"labels":[],"label_agreement":null},{"id":"W1990603591","doi":"10.1086/509516","title":"Reply to Tsang et al.","year":2006,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.007211378412050174,"score_gpt":0.25006214143024663,"score_spread":0.24285076301819647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990603591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906144,0.0014265083,0.00025584525,0.0052064187,0.0012434397,0.0000836849,0.000013979886,0.000038681592,0.0011170345],"genre_scores_gemma":[0.9942917,0.000109852626,0.000006256541,0.0050541563,0.00014435311,0.0000026753382,0.000004483054,0.00000971535,0.00037679911],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993131,0.0002018478,0.00026929614,0.00005930904,0.000017777476,0.00013864554],"domain_scores_gemma":[0.99933773,0.00016031151,0.00018144862,0.00014811478,0.00014941963,0.000022990025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026282587,0.00009100763,0.00015994483,0.0001068823,0.00017123114,0.00002413686,0.00011198887,0.000029189536,0.00037784092],"category_scores_gemma":[0.00011181442,0.000054427048,0.00011096194,0.00013733844,0.000037815473,0.00010438933,0.000034646288,0.00014739778,0.00013721829],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029923426,0.00038764338,0.039138995,0.0000044743188,0.00016886454,0.0000031689738,0.00010550517,0.00032601404,0.2296064,0.0006520737,0.7278408,0.00146686],"study_design_scores_gemma":[0.0011450202,0.0006449357,0.19399618,0.000041473097,0.0001855694,0.0010993464,0.0000792444,3.6520086e-7,0.011093597,0.0010556069,0.7905147,0.00014395418],"about_ca_topic_score_codex":0.00048509095,"about_ca_topic_score_gemma":0.00004436199,"teacher_disagreement_score":0.2185128,"about_ca_system_score_codex":0.000026319865,"about_ca_system_score_gemma":0.000045774425,"threshold_uncertainty_score":0.4137093},"labels":[],"label_agreement":null},{"id":"W1991311552","doi":"10.1007/s12028-010-9387-5","title":"Diffuse Cerebral Intravascular Coagulation and Cerebral Infarction in Pneumococcal Meningitis","year":2010,"lang":"en","type":"article","venue":"Neurocritical Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; University of Toronto","funders":"","keywords":"Medicine; Cerebral infarction; Vasculitis; Meningitis; Disseminated intravascular coagulation; Infarction; Cerebral vasculitis; Endarteritis; Thrombosis; Autopsy; Pathology; Internal medicine; Cardiology; Surgery; Ischemia; Myocardial infarction; Disease","score_opus":0.006601643439982091,"score_gpt":0.23265955482155806,"score_spread":0.22605791138157597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991311552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976552,0.00010420912,0.000014072171,0.00042742887,0.0012813626,0.00014389514,0.000016920292,0.0000667807,0.00029013274],"genre_scores_gemma":[0.9996644,0.000007829047,0.00002467745,0.000049797123,0.00011047932,0.000019159044,0.00008285315,0.00001397773,0.000026816273],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991914,0.000088181965,0.00018908472,0.00026170356,0.00001697379,0.0002526786],"domain_scores_gemma":[0.9996734,0.00005923135,0.000016784175,0.00014561576,0.00006906651,0.000035898574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004302968,0.00012706385,0.000166412,0.00009701287,0.00012700721,0.00004009793,0.000055749108,0.00023062089,0.0003084816],"category_scores_gemma":[0.00013474461,0.00012245374,0.00005703366,0.000092140566,0.000096419084,0.00014735837,0.000057804275,0.0004962496,0.00003891979],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004240867,0.00008488693,0.05949314,0.000025539042,0.0000117275,0.0000032515595,0.00026372017,7.337271e-7,0.9311106,0.004629603,0.000045721397,0.004288631],"study_design_scores_gemma":[0.0023448004,0.00029030317,0.94503385,0.000018708319,0.000043130523,0.00033472184,0.00027985862,0.000027012251,0.040842265,0.00046507284,0.010070587,0.00024967422],"about_ca_topic_score_codex":0.0002445092,"about_ca_topic_score_gemma":0.0005938134,"teacher_disagreement_score":0.8902684,"about_ca_system_score_codex":0.000013265498,"about_ca_system_score_gemma":0.000014398201,"threshold_uncertainty_score":0.4993519},"labels":[],"label_agreement":null},{"id":"W1991543412","doi":"10.1016/j.vaccine.2003.09.022","title":"Cost-effectiveness of immunization strategies for the control of serogroup C meningococcal disease","year":2003,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Institut National de Santé Publique du Québec; Université Laval","funders":"","keywords":"Immunization; Medicine; Vaccination; Meningococcal disease; Epidemiology; Conjugate vaccine; Meningococcal vaccine; Booster dose; Cost effectiveness; Pediatrics; Herd immunity; Environmental health; Neisseria meningitidis; Immunology; Internal medicine; Biology; Antigen","score_opus":0.02223978169812048,"score_gpt":0.28193674842023203,"score_spread":0.25969696672211157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991543412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9473503,0.0020335151,0.048848867,0.00005564415,0.0005348139,0.0010224219,0.00007802543,0.000020446629,0.000055918397],"genre_scores_gemma":[0.9997183,0.000041536347,0.000023798484,0.000006475886,0.000014146966,0.00009021429,0.000051653442,0.000008304927,0.00004557273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939007,0.00020757616,0.00019428658,0.000090666654,0.000007169462,0.00011021806],"domain_scores_gemma":[0.9990234,0.0005170959,0.000110911555,0.00018004255,0.00015971898,0.000008854525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031067154,0.00008360052,0.00019984385,0.00003987815,0.00009518156,0.0000063311836,0.00007697097,0.000061653445,0.00015645586],"category_scores_gemma":[0.00011624313,0.00005427866,0.00007281069,0.00011015664,0.000018262797,0.000070260496,0.000010314928,0.00005004419,0.0000028625109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014891493,0.00018519175,0.017859083,0.00010428619,0.00027096315,5.7319273e-8,0.00006237518,0.00040017226,0.93175036,0.046748493,0.000099026314,0.0010308211],"study_design_scores_gemma":[0.016361108,0.00096149865,0.46317357,0.0001337589,0.0006019148,0.000015167126,0.0007189156,0.00016101095,0.47360212,0.002843439,0.04114123,0.00028629144],"about_ca_topic_score_codex":0.00006189282,"about_ca_topic_score_gemma":0.000008599686,"teacher_disagreement_score":0.45814827,"about_ca_system_score_codex":0.000007665166,"about_ca_system_score_gemma":0.000047288537,"threshold_uncertainty_score":0.22134194},"labels":[],"label_agreement":null},{"id":"W1991649295","doi":"10.1016/s0140-6736(09)61802-x","title":"The yin and yang of paracetamol and paediatric immunisations","year":2009,"lang":"ms","type":"letter","venue":"The Lancet","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Pertussis vaccine; Acetaminophen; Vaccination; Tetanus; Diphtheria; Immunization; Advisory committee; Population; Antipyretic; Pediatrics; Immunology; Pharmacology; Antibody; Analgesic; Environmental health","score_opus":0.02010308721406899,"score_gpt":0.2493391981919529,"score_spread":0.22923611097788393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991649295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61552745,0.056168985,0.0000099808585,0.32479152,0.0015873449,0.0005309175,0.00024551264,0.00003508829,0.0011031824],"genre_scores_gemma":[0.8756115,0.09140341,0.000048501057,0.019036656,0.006002161,0.000062434585,0.00027833984,0.000043629458,0.0075134123],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985398,0.0005451011,0.0003479238,0.00020123381,0.000018052038,0.00034785454],"domain_scores_gemma":[0.99814224,0.00085258944,0.00029887274,0.00064119714,0.00005424024,0.000010865895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051068974,0.00023242272,0.000576292,0.000059075395,0.00082034245,0.00007516886,0.00032323913,0.00047756336,0.00011936902],"category_scores_gemma":[0.000079865466,0.00012325028,0.00007922598,0.00012690651,0.00045165783,0.000047223435,0.00014462609,0.0009316385,0.00003827185],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003522653,0.00007444379,0.006000393,0.0001568064,0.00084936403,0.0000023724383,0.0012548092,0.000001641341,0.049770955,0.0034637454,0.900987,0.037086174],"study_design_scores_gemma":[0.0010072297,0.00016607283,0.07653051,0.00004900359,0.00027469647,0.00012327956,0.00012515011,0.0000025340075,0.00043879068,0.0010349603,0.9200688,0.0001789941],"about_ca_topic_score_codex":0.00023986788,"about_ca_topic_score_gemma":0.00006242172,"teacher_disagreement_score":0.30575487,"about_ca_system_score_codex":0.000009697528,"about_ca_system_score_gemma":0.00003093045,"threshold_uncertainty_score":0.6309494},"labels":[],"label_agreement":null},{"id":"W1991907972","doi":"10.1016/j.vaccine.2003.09.009","title":"Hypotonic-Hyporesponsive Episode (HHE) as an adverse event following immunization: case definition and guidelines for data collection, analysis, and presentation","year":2003,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Presentation (obstetrics); Immunization; Medicine; Pediatrics; Surgery; Immunology","score_opus":0.10748714370316023,"score_gpt":0.39617436103540105,"score_spread":0.2886872173322408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991907972","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010310462,0.9843356,0.002393694,0.00007935556,0.0009196894,0.0014913537,0.0003940434,0.00006013988,0.000015689946],"genre_scores_gemma":[0.00040530055,0.98193336,0.0020754468,0.000048024373,0.000099180004,0.00016403181,0.014431633,0.00004652267,0.0007964996],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975819,0.0005389939,0.0009241697,0.00069343037,0.000022462662,0.00023902474],"domain_scores_gemma":[0.997907,0.00040191534,0.00049981585,0.00072395493,0.00042010137,0.00004720206],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00064980215,0.00039110793,0.0011748,0.0006122283,0.00062291994,0.000056354722,0.00015185121,0.00044763656,0.0001912118],"category_scores_gemma":[0.0007898768,0.00033658318,0.0002413743,0.0008469742,0.00001578846,0.00037139546,0.00014998676,0.00018081421,0.0000134645625],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007606751,0.0006802255,0.0018313257,0.004249319,0.019587535,0.00012205988,0.00036672785,0.000019033283,0.0007114928,0.0011233307,0.024573283,0.945975],"study_design_scores_gemma":[0.0018832885,0.0003089396,0.0001622792,0.0005647473,0.012928189,0.0036387136,0.00017353745,0.00010127356,0.00003279683,0.00012892274,0.9796061,0.00047119937],"about_ca_topic_score_codex":0.0010976994,"about_ca_topic_score_gemma":0.0012510492,"teacher_disagreement_score":0.9550328,"about_ca_system_score_codex":0.00005079664,"about_ca_system_score_gemma":0.00016612983,"threshold_uncertainty_score":0.9999086},"labels":[],"label_agreement":null},{"id":"W1992013481","doi":"10.1371/journal.pone.0109778","title":"c-di-GMP Enhances Protective Innate Immunity in a Murine Model of Pertussis","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"Canadian Institutes of Health Research; Bill and Melinda Gates Foundation","keywords":"Innate immune system; Immune system; Biology; Immunology; Acquired immune system; CCL18; Innate lymphoid cell; Immunity; Bordetella pertussis; Microbiology","score_opus":0.03422718283484706,"score_gpt":0.22896562080767036,"score_spread":0.1947384379728233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992013481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998387,0.00012308755,0.00019869763,0.0001258579,0.000056759684,0.00022156679,0.000014112032,0.000032270375,0.000840642],"genre_scores_gemma":[0.9991588,0.00005440968,0.00016209016,0.000015295218,0.000017627268,0.0000764232,0.000013224336,0.000008012284,0.0004941254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993542,0.00014726905,0.00020401725,0.00013111068,0.000012252146,0.0001511948],"domain_scores_gemma":[0.9995765,0.00005556892,0.00008552359,0.00018833533,0.000085894186,0.000008196558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001770833,0.00009338399,0.00027499054,0.0001092047,0.00006445092,0.000004253384,0.000098834855,0.00012276578,0.00016703572],"category_scores_gemma":[0.0001501659,0.000078701814,0.000035682067,0.00012377146,0.000061707215,0.00007509121,0.00006191002,0.00020093871,0.000040783798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012512052,0.0011674995,0.001934907,0.000045220662,0.00012899387,3.591028e-8,0.00035080255,0.000013659598,0.99525696,0.00027978575,0.000006993212,0.00069001206],"study_design_scores_gemma":[0.00078653626,0.0002618952,0.012641619,0.00011301388,0.000034939603,0.0000010823666,0.0000403919,0.0006486358,0.9845562,0.0007538603,0.00005511564,0.000106736035],"about_ca_topic_score_codex":0.0006436638,"about_ca_topic_score_gemma":0.00022439235,"teacher_disagreement_score":0.0107067125,"about_ca_system_score_codex":0.000016601967,"about_ca_system_score_gemma":0.000020067127,"threshold_uncertainty_score":0.32093668},"labels":[],"label_agreement":null},{"id":"W1992352307","doi":"10.1016/j.mimet.2010.09.010","title":"Construction of a novel shuttle vector for use in Haemophilus influenzae and H. parainfluenzae","year":2010,"lang":"en","type":"article","venue":"Journal of Microbiological Methods","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NIHR Oxford Biomedical Research Centre; Canadian Institutes of Health Research; National Institute for Health and Care Research; Wellcome Trust","keywords":"Shuttle vector; Haemophilus influenzae; Haemophilus parainfluenzae; Biology; Vector (molecular biology); Complementation; Escherichia coli; Gene; Genetics; Virology; Microbiology; Mutant; Computational biology; Bacteria; Recombinant DNA","score_opus":0.0631470017532978,"score_gpt":0.3600151572678413,"score_spread":0.2968681555145435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992352307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99213725,0.00042610278,0.0055755684,0.000101110454,0.0015220628,0.00016935056,0.000051352104,0.000007375129,0.000009800898],"genre_scores_gemma":[0.6560832,0.00006667691,0.34362206,0.000080604244,0.00010577364,0.0000065952777,0.0000057904726,0.000009076048,0.000020184998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878293,0.00023412959,0.0006480341,0.0001453707,0.0000072478324,0.00018231348],"domain_scores_gemma":[0.9981184,0.001076819,0.0004525128,0.000109777924,0.00021691264,0.000025578154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011516035,0.00013263123,0.000496705,0.0001743223,0.000053906286,0.000014766101,0.000112370995,0.0004002225,0.00008465981],"category_scores_gemma":[0.0013757241,0.0000906015,0.00014127346,0.00011841214,0.0002709381,0.00012835678,0.000047583715,0.0004496854,9.773646e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046935896,0.00016001552,0.009001588,0.000012267823,0.000067302964,3.685323e-7,0.000040067443,0.0000021699436,0.9748272,0.001136814,0.00008397242,0.014198879],"study_design_scores_gemma":[0.0068304404,0.0014195432,0.19241036,0.00008016354,0.00010613391,0.0025082375,0.00009569858,0.000008528672,0.6972304,0.0012716389,0.09775796,0.0002809022],"about_ca_topic_score_codex":0.00003831509,"about_ca_topic_score_gemma":0.00002214555,"teacher_disagreement_score":0.3380465,"about_ca_system_score_codex":0.0000130876715,"about_ca_system_score_gemma":0.000039367776,"threshold_uncertainty_score":0.36946216},"labels":[],"label_agreement":null},{"id":"W1992418017","doi":"10.1097/inf.0b013e3181c37e03","title":"Haemophilus Disease in Alaskan and Canadian Children","year":2010,"lang":"en","type":"letter","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Population; Demography; Disease; Pediatrics; Environmental health; Pathology","score_opus":0.005243008344234198,"score_gpt":0.20390161980224752,"score_spread":0.19865861145801333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992418017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84687394,0.004340214,0.0000013723962,0.14308414,0.004650366,0.00043216033,0.00039353676,0.000051892133,0.00017239213],"genre_scores_gemma":[0.91810924,0.0033388413,0.0000018084271,0.061979722,0.014922433,0.00005332469,0.0003695335,0.00008846807,0.0011366134],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99792343,0.00040714993,0.00046061722,0.00036529987,0.000048410697,0.0007950829],"domain_scores_gemma":[0.9986884,0.00016700166,0.0002891205,0.00043628414,0.00010807226,0.00031110397],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032899238,0.00044100935,0.0003985188,0.0008828366,0.0009836323,0.0002099578,0.00034258713,0.0010577897,0.0011978981],"category_scores_gemma":[0.00023119108,0.00031661126,0.00023077056,0.0002911778,0.00015161064,0.0001409625,0.00009756345,0.007148345,0.00024411012],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043038992,0.000050198196,0.57983303,0.000024480974,0.00010902663,0.00015521911,0.000037415775,0.0000048983625,0.00001469302,0.000008799382,0.4193132,0.0004059974],"study_design_scores_gemma":[0.0012060571,0.00005887566,0.72856855,0.000023738725,0.0008754008,0.0020574983,0.0000029770663,0.0000017412253,0.0000010240444,0.0012820213,0.2654039,0.0005182026],"about_ca_topic_score_codex":0.02905766,"about_ca_topic_score_gemma":0.01625611,"teacher_disagreement_score":0.1539093,"about_ca_system_score_codex":0.00015877251,"about_ca_system_score_gemma":0.0011824357,"threshold_uncertainty_score":0.9999286},"labels":[],"label_agreement":null},{"id":"W1992613749","doi":"10.1016/j.vaccine.2004.05.033","title":"Adult tetanus, diphtheria and pertussis immunization: knowledge, beliefs, behavior and anticipated uptake","year":2004,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Tetanus; Medicine; Immunization; Diphtheria; Pertussis vaccine; Vaccination; Booster dose; Pediatrics; Immunology; Antigen","score_opus":0.01200101352640419,"score_gpt":0.2534372932901902,"score_spread":0.241436279763786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992613749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929773,0.0054523833,0.000024631121,0.00045157233,0.0005577189,0.000191984,0.000023638657,0.00008551663,0.00023524823],"genre_scores_gemma":[0.99745375,0.0014147155,0.00011366836,0.000041545358,0.00007033582,0.000018447823,0.00014516684,0.00002005298,0.0007222904],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925727,0.000045033015,0.00024274985,0.00023691535,0.000007656016,0.00021037617],"domain_scores_gemma":[0.99956197,0.000023857729,0.00006130187,0.00019687512,0.00012562673,0.00003037912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006845573,0.00017411834,0.00024087896,0.00009296477,0.00028452862,0.000032786967,0.00006686771,0.00018277188,0.0006867108],"category_scores_gemma":[0.00004447424,0.00014020619,0.000029433773,0.00018468006,0.000025650119,0.000112439666,0.00008112236,0.00012930694,0.00007024655],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014020168,0.00060089846,0.06342306,0.00003223124,0.00018781169,0.0000036824763,0.0010099238,0.0000014900388,0.90890646,0.0020992921,0.000921406,0.022673562],"study_design_scores_gemma":[0.005113519,0.00038602747,0.92057264,0.00007324993,0.00014838636,0.00036965017,0.00017484136,0.0000021677006,0.030569507,0.000105564475,0.042168584,0.00031584402],"about_ca_topic_score_codex":0.00034625037,"about_ca_topic_score_gemma":0.00019555012,"teacher_disagreement_score":0.87833697,"about_ca_system_score_codex":0.000016461405,"about_ca_system_score_gemma":0.000025193174,"threshold_uncertainty_score":0.7519002},"labels":[],"label_agreement":null},{"id":"W1992684859","doi":"10.1111/lam.12265","title":"Differential susceptibility of invasive <i>Haemophilus influenzae</i> serotype a and serotype b to ampicillin and other commonly prescribed antibiotics","year":2014,"lang":"en","type":"article","venue":"Letters in Applied Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ste. Anne's Hospital; Manitoba Health; Public Health Agency of Canada","funders":"","keywords":"Serotype; Public health; Agency (philosophy); Library science; Ampicillin; Microbiology; Medicine; Virology; Biology; Antibiotics; Sociology; Pathology; Social science","score_opus":0.010890546039474551,"score_gpt":0.2217262876416324,"score_spread":0.21083574160215784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992684859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980301,0.00007047576,0.00023063221,0.0005100348,0.00037093007,0.00054112024,0.00008125214,0.000033505763,0.00013192707],"genre_scores_gemma":[0.9968821,0.000017912269,0.0003302298,0.0026207378,0.000048700196,0.0000068419154,0.000055116157,0.000019685589,0.00001869531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985838,0.0002003624,0.00041661388,0.000444357,0.000008138121,0.0003467169],"domain_scores_gemma":[0.99928427,0.00020803486,0.00013066918,0.00031602714,0.00003001916,0.000030980373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017456208,0.00024551986,0.0005405833,0.00015569429,0.00007806996,0.000013042091,0.00015367403,0.00029556904,0.000084500985],"category_scores_gemma":[0.00004552452,0.00021947974,0.00003726216,0.00013314292,0.00036738825,0.000023131235,0.00023007035,0.00026949384,0.000031715343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039769922,0.000085642045,0.07247439,0.000055153327,0.00006102123,3.2616407e-7,0.00030661107,0.0000073017904,0.9245545,0.0007324544,0.0006666125,0.0006582589],"study_design_scores_gemma":[0.003956083,0.00052804925,0.0726646,0.00008074063,0.00006788298,0.00010543448,0.000082639315,0.0000030347985,0.89912724,0.0002869275,0.022575768,0.0005215797],"about_ca_topic_score_codex":0.00036712014,"about_ca_topic_score_gemma":0.0012831158,"teacher_disagreement_score":0.025427276,"about_ca_system_score_codex":0.000019719368,"about_ca_system_score_gemma":0.000013972908,"threshold_uncertainty_score":0.89501244},"labels":[],"label_agreement":null},{"id":"W1992812136","doi":"10.4161/hv.24009","title":"Response to the changing epidemiology of meningococcal disease in North America 1945-2010","year":2013,"lang":"en","type":"letter","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; University of Alberta; University of British Columbia; Stollery Children's Hospital; Dalhousie University; BC Children's Hospital","funders":"","keywords":"Meningococcal disease; Epidemiology; Meningococcal vaccine; Medicine; Disease; Neisseria meningitidis; Meningococcal Infections; Immunization; Pediatrics; Environmental health; Virology; Immunology; Biology; Internal medicine","score_opus":0.03631894179820544,"score_gpt":0.2895386161324734,"score_spread":0.25321967433426795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992812136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7747243,0.0054095993,0.000093389644,0.21553068,0.0026712948,0.0012503479,0.00019312526,0.000103006954,0.000024274043],"genre_scores_gemma":[0.53058827,0.0006539442,0.00014234216,0.4393774,0.0025848853,0.0010705207,0.0022548798,0.00037021027,0.022957537],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953423,0.001797922,0.0011943319,0.0006044966,0.000038000027,0.0010229342],"domain_scores_gemma":[0.9965432,0.0012736922,0.00063646573,0.0013265302,0.00018388299,0.000036175796],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00075704185,0.00062284316,0.0011624933,0.00083018455,0.00039179393,0.000022928374,0.0008990944,0.0007996294,0.0016475328],"category_scores_gemma":[0.00021923732,0.0004514313,0.00033698173,0.0006615628,0.00016592629,0.000082190236,0.00029639,0.0017499547,0.00059373444],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00419564,0.00048397304,0.084966935,0.000247717,0.0017748467,0.000027551603,0.006284907,0.00021918702,0.09809519,0.00010224227,0.79488677,0.00871503],"study_design_scores_gemma":[0.00089291774,0.00029578942,0.13271585,0.00009215409,0.00012536366,0.000014626297,0.00007070905,0.0000063367884,0.00017182312,0.00005820643,0.8651162,0.0004400692],"about_ca_topic_score_codex":0.0010178046,"about_ca_topic_score_gemma":0.00030874132,"teacher_disagreement_score":0.24413599,"about_ca_system_score_codex":0.00009575269,"about_ca_system_score_gemma":0.000102057165,"threshold_uncertainty_score":0.99979377},"labels":[],"label_agreement":null},{"id":"W1993507524","doi":"10.1128/iai.02495-14","title":"Sterilizing Immunity Elicited by Neisseria meningitidis Carriage Shows Broader Protection than Predicted by Serum Antibody Cross-Reactivity in <i>CEACAM1</i> -Humanized Mice","year":2014,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Neisseria meningitidis; Biology; Microbiology; Antibody; Immunity; Immune system; Virology; Antiserum; Strain (injury); Neisseriaceae; Humoral immunity; Immunology; Bacteria; Antibiotics","score_opus":0.012462469060492832,"score_gpt":0.2694014648051376,"score_spread":0.2569389957446448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993507524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99594015,0.00024415017,0.0008653349,0.000068411966,0.0012020114,0.0006373533,0.00017198035,0.0003157449,0.00055487896],"genre_scores_gemma":[0.9981524,0.00020266205,0.0000053572026,0.000060834747,0.000057888315,0.00008249956,0.00083974755,0.000038792317,0.0005598458],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99719,0.0013290251,0.00054474926,0.00042410908,0.000032962933,0.00047914783],"domain_scores_gemma":[0.9989339,0.0001379206,0.0002868866,0.0004279367,0.00015950676,0.000053845193],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00075061043,0.0003899654,0.00050117966,0.00023606776,0.0010109661,0.00018566736,0.00014490072,0.00055639626,0.00035984183],"category_scores_gemma":[0.00024094342,0.00038781733,0.00010751974,0.0004374241,0.00019279585,0.00077824766,0.00015913938,0.0010414593,0.000023972443],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036807495,0.00038428998,0.08457636,0.00004165397,0.00008783241,1.0907214e-7,0.00034493062,0.000002165248,0.9104801,0.00001419375,0.00029249294,0.003407824],"study_design_scores_gemma":[0.0040040542,0.00052945263,0.58515453,0.00008111709,0.00005071808,0.0000749753,0.00014065318,0.00013196266,0.37133425,0.000038905502,0.03797901,0.0004803982],"about_ca_topic_score_codex":0.031219317,"about_ca_topic_score_gemma":0.0014124344,"teacher_disagreement_score":0.5391458,"about_ca_system_score_codex":0.000107904954,"about_ca_system_score_gemma":0.00002917661,"threshold_uncertainty_score":0.99985737},"labels":[],"label_agreement":null},{"id":"W1993926253","doi":"10.1128/jcm.43.5.2449-2451.2005","title":"Use of Monoclonal Antibodies To Serotype <i>Bordetella pertussis</i> Isolates: Comparison of Results Obtained by Indirect Whole-Cell Enzyme-Linked Immunosorbent Assay and Bacterial Microagglutination Methods","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Bordetella pertussis; Monoclonal antibody; Serotype; Microbiology; Whooping cough; Biology; Enzyme; Virology; Bordetella; Antibody; Bacteria; Immunology; Vaccination; Biochemistry; Genetics","score_opus":0.062081514621225346,"score_gpt":0.3833647712732139,"score_spread":0.32128325665198854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993926253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99310684,0.0025872993,0.00057432137,0.0010153343,0.0020180133,0.00024707333,0.000403295,0.000013456026,0.000034357003],"genre_scores_gemma":[0.98549294,0.00075106195,0.012842234,0.00012900756,0.00023172917,0.0000021124188,0.00017209696,0.000022030843,0.0003567836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99382424,0.0020920753,0.003385381,0.00034053778,0.00001979302,0.0003379808],"domain_scores_gemma":[0.9935862,0.0029359637,0.0024760764,0.0002643914,0.000666783,0.00007058599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027911244,0.00029311245,0.001690418,0.0002677246,0.00010438048,0.000023715254,0.00028150383,0.0007571849,0.000120000484],"category_scores_gemma":[0.0018263905,0.0002278493,0.000359307,0.00018254943,0.0003243941,0.00017943642,0.00017476958,0.0006567587,0.000017025739],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005936249,0.0009464476,0.006774717,0.000023645036,0.00042608537,2.9824506e-7,0.00032771387,0.000020521253,0.95387733,0.000006250588,0.0117661,0.019894654],"study_design_scores_gemma":[0.003616819,0.0024755457,0.010509088,0.000088651206,0.00016704899,0.00009785028,0.00007210592,0.0000132215655,0.68868303,0.00000822067,0.2940682,0.00020025701],"about_ca_topic_score_codex":0.00006769757,"about_ca_topic_score_gemma":0.000034454995,"teacher_disagreement_score":0.28230208,"about_ca_system_score_codex":0.000031912634,"about_ca_system_score_gemma":0.00013302332,"threshold_uncertainty_score":0.9291425},"labels":[],"label_agreement":null},{"id":"W1993977314","doi":"10.1136/bmj.324.7353.1537","title":"Whooping cough—a continuing problem","year":2002,"lang":"en","type":"editorial","venue":"BMJ","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Whooping cough; Medicine; Vaccination; European union; Pediatrics; Pertussis vaccine; Immunization; Environmental health; Immunology","score_opus":0.012396944374904923,"score_gpt":0.27031456714955865,"score_spread":0.25791762277465374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993977314","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009403677,0.0018802822,0.000019076539,0.00021318269,0.9876309,0.00040494784,0.00013357513,0.00017570928,0.008601953],"genre_scores_gemma":[0.001003873,0.000403964,0.00008998949,0.000015321439,0.92625713,0.00012123339,0.0009027122,0.000054159118,0.07115163],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987227,0.00012147837,0.0004374168,0.00034398178,0.000024951225,0.00034949224],"domain_scores_gemma":[0.9989185,0.00027120204,0.00028797652,0.00031633978,0.00019114368,0.000014855556],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026106456,0.00026773062,0.00047335503,0.00009991379,0.00015088513,0.000059382877,0.00019434311,0.0014274502,0.0020994518],"category_scores_gemma":[0.0002973213,0.00024224528,0.00013826619,0.000086516695,0.000048118254,0.000075626005,0.00009564273,0.0007734241,0.0019254984],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002353005,0.000036470217,0.000017242315,0.000050702776,0.00014138468,0.0000019107226,0.00008869067,4.0774842e-7,0.009449633,0.0000411583,0.98665744,0.0034914583],"study_design_scores_gemma":[0.0007342796,0.00007989101,0.000023770826,0.00030484004,0.00006995714,0.00001931032,0.000014201162,3.9605408e-7,0.00054917193,0.000027285285,0.9978798,0.0002970761],"about_ca_topic_score_codex":0.00019667062,"about_ca_topic_score_gemma":0.00005361654,"teacher_disagreement_score":0.06254968,"about_ca_system_score_codex":0.0000458113,"about_ca_system_score_gemma":0.000053584998,"threshold_uncertainty_score":0.9998689},"labels":[],"label_agreement":null},{"id":"W1994116326","doi":"10.1016/s1474-4422(06)70452-5","title":"Demystifying vaccination-associated encephalopathy","year":2006,"lang":"en","type":"letter","venue":"The Lancet Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Adverse Event Reporting System; Medicine; Adverse effect; Vaccination; Encephalopathy; Polio vaccine; Smallpox; Poliomyelitis; Family medicine; Pediatrics; Virology; Psychiatry; Internal medicine","score_opus":0.02657351261405221,"score_gpt":0.24982446826823726,"score_spread":0.22325095565418504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994116326","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11427029,0.0010172236,0.000022709683,0.87304544,0.00710304,0.0003549361,0.00017236525,0.00035305228,0.0036609352],"genre_scores_gemma":[0.23003618,0.00015870162,0.0000053358103,0.7510153,0.006825555,0.00014435081,0.0024303112,0.000097039425,0.009287238],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99754715,0.0009187364,0.00036917347,0.00043248382,0.000023452849,0.0007089922],"domain_scores_gemma":[0.9983992,0.0006019145,0.00033463753,0.0005638451,0.00009375497,0.000006623445],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.00030205288,0.000334823,0.0006818904,0.00012988017,0.00039488176,0.000038258902,0.0005981828,0.0015667498,0.0013874291],"category_scores_gemma":[0.00011048649,0.00023557473,0.00014808265,0.00018814986,0.00009917786,0.000050491853,0.00013917858,0.0029037015,0.0010355983],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033395732,0.00002663331,0.0018883531,0.000014638041,0.00011410828,0.00002397201,0.000026341371,0.0000047172402,0.0041061253,0.000098444005,0.993031,0.00063225825],"study_design_scores_gemma":[0.0007817138,0.00014337293,0.030682305,0.000008182024,0.00010015086,0.00017707248,0.0000010808516,0.0000024966182,0.0002552839,0.0011437191,0.96647614,0.00022846548],"about_ca_topic_score_codex":0.00032018186,"about_ca_topic_score_gemma":0.00013629987,"teacher_disagreement_score":0.12203016,"about_ca_system_score_codex":0.000024878493,"about_ca_system_score_gemma":0.00004318738,"threshold_uncertainty_score":0.9997422},"labels":[],"label_agreement":null},{"id":"W1994663261","doi":"10.1097/01.inf.0000177282.53500.77","title":"Resurgence of Pertussis in Europe","year":2005,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":261,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Incidence (geometry); Measles; Medicine; Epidemiology; Pediatrics; Demography; Vaccination; Age groups; Whooping cough; Immunology","score_opus":0.009048279994267001,"score_gpt":0.23370971530803497,"score_spread":0.22466143531376798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994663261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948752,0.0024402777,0.0000319637,0.0005884789,0.0010060329,0.00008092448,0.000010470028,0.000023069279,0.0009436108],"genre_scores_gemma":[0.9966255,0.0022645127,0.000005936725,0.000060747483,0.00065288093,0.000005110511,0.0000020793348,0.00000950895,0.00037374775],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990483,0.00025685146,0.000354448,0.000098830336,0.000022257887,0.00021931734],"domain_scores_gemma":[0.9993186,0.00013860126,0.00018625834,0.00016608759,0.00015049074,0.000039970906],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039982758,0.00010260668,0.00015115569,0.00020743227,0.00022324912,0.00001862949,0.00014523017,0.00005563558,0.001042416],"category_scores_gemma":[0.00033800057,0.00006540679,0.00009069447,0.00050431467,0.000047805785,0.00012031031,0.000044726174,0.0003330788,0.00018112922],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020899996,0.0004500289,0.97897154,0.000013994375,0.00005332787,0.000004656478,0.0002486335,0.000424319,0.0071391817,0.0003005631,0.0070688887,0.0051158867],"study_design_scores_gemma":[0.0015586651,0.00013790825,0.96572405,0.000015325093,0.00021980259,0.0006911642,0.000039999402,0.000019546527,0.0004590761,0.00037655406,0.030548424,0.0002094772],"about_ca_topic_score_codex":0.000059924125,"about_ca_topic_score_gemma":0.000030496398,"teacher_disagreement_score":0.023479534,"about_ca_system_score_codex":0.000032079894,"about_ca_system_score_gemma":0.0001516911,"threshold_uncertainty_score":0.9998708},"labels":[],"label_agreement":null},{"id":"W1994677849","doi":"10.1016/j.vaccine.2008.09.041","title":"Naturally-occurring human serum antibodies to inner core lipopolysaccharide epitopes of Neisseria meningitidis protect against invasive meningococcal disease caused by isolates displaying homologous inner core structures","year":2008,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Wellcome Trust","keywords":"Neisseria meningitidis; Heptose; Epitope; Lipopolysaccharide; Antibody; Biology; Inner core; Neisseriaceae; Microbiology; Epitope mapping; Mutant; Molecular biology; Immunology; Bacteria; Biochemistry; Antibiotics; Genetics; Gene","score_opus":0.020539446578682487,"score_gpt":0.26438203555342543,"score_spread":0.24384258897474295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994677849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962072,0.0014359228,0.000018726545,0.00021474651,0.0007821019,0.0007786571,0.0003669346,0.00017344722,0.000022296128],"genre_scores_gemma":[0.9986881,0.00011816537,0.000076510725,0.0001657474,0.00014239179,0.00006405406,0.00037291748,0.000056043744,0.00031608407],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980279,0.00010233418,0.0006603714,0.00057364866,0.000035497098,0.0006002315],"domain_scores_gemma":[0.9987597,0.00012902857,0.000332956,0.00044668786,0.00021963594,0.000112033595],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000116687945,0.00048696864,0.0007250112,0.00030976822,0.00082645495,0.000034582394,0.0003546107,0.00028243952,0.00036503974],"category_scores_gemma":[0.00028107155,0.00039053083,0.00016043628,0.00031369363,0.000075992415,0.0002558086,0.00031108374,0.000449527,0.00002617587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031780583,0.000091573114,0.14318705,0.00007148209,0.00026363027,0.000013174118,0.00070343894,0.00004415809,0.8522055,0.00019414187,0.002610422,0.00029760276],"study_design_scores_gemma":[0.0022592812,0.0005387199,0.27014723,0.00023583112,0.00013005019,0.00010152784,0.0002664539,0.000009917845,0.7236013,0.00018358554,0.0018308879,0.0006952467],"about_ca_topic_score_codex":0.0008062928,"about_ca_topic_score_gemma":0.00027868108,"teacher_disagreement_score":0.12860425,"about_ca_system_score_codex":0.000053540633,"about_ca_system_score_gemma":0.00007549144,"threshold_uncertainty_score":0.9998547},"labels":[],"label_agreement":null},{"id":"W1994885480","doi":"10.1016/j.ijantimicag.2014.04.001","title":"Surveillance of antimicrobial resistance in contemporary clinical isolates of Bordetella pertussis in Ontario, Canada","year":2014,"lang":"en","type":"letter","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; Canada Research Chairs; Public Health Ontario; University of Toronto","funders":"Public Health Agency of Canada","keywords":"Etest; Bordetella pertussis; Antibiotic resistance; Antibiotics; Medicine; Resistance (ecology); Drug resistance; Clinical microbiology; Intensive care medicine; Microbiology; Biology; Bacteria; Ecology","score_opus":0.03381995070897485,"score_gpt":0.2841550110291166,"score_spread":0.25033506032014174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994885480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9531659,0.00025173387,0.000009968012,0.036602795,0.009082141,0.00017015725,0.00029974958,0.0000037506506,0.00041384238],"genre_scores_gemma":[0.9808225,0.0002719289,0.000081252656,0.016947128,0.00056732015,9.852794e-7,0.00028771226,0.000030403877,0.0009907624],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99610585,0.0005237153,0.0026635465,0.00030942747,0.000100685706,0.00029674705],"domain_scores_gemma":[0.99624664,0.00039041732,0.0023521376,0.00022534214,0.0007629343,0.000022550495],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00069874304,0.00032262734,0.0013155519,0.00054569123,0.000027093827,0.00002167003,0.0008621279,0.00074903975,0.00045854278],"category_scores_gemma":[0.00019838406,0.00029808094,0.00037867777,0.00014203918,0.0001799663,0.00012906283,0.0001285086,0.0017568703,0.0000053409726],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010453179,0.00025441026,0.20139587,0.00007796213,0.0005607098,0.00015747281,0.00009668745,0.000013913269,0.034299288,0.0000027292338,0.762011,0.000084666375],"study_design_scores_gemma":[0.00469954,0.00015455182,0.15037028,0.0018155713,0.000039839775,0.0002481746,0.000011827493,0.0000010903384,0.010265528,0.000014506804,0.8319838,0.00039526506],"about_ca_topic_score_codex":0.63323414,"about_ca_topic_score_gemma":0.8666454,"teacher_disagreement_score":0.23341125,"about_ca_system_score_codex":0.00033353534,"about_ca_system_score_gemma":0.0019023725,"threshold_uncertainty_score":0.99994713},"labels":[],"label_agreement":null},{"id":"W1994938183","doi":"10.1016/j.jaci.2004.01.529","title":"The immune response to conjugated meningococcal C vaccine in oncology patients","year":2004,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Children's Hospital","funders":"","keywords":"Meningococcal vaccine; Medicine; Immune system; Oncology; Internal medicine; Immunology; Immunization","score_opus":0.016699781158129725,"score_gpt":0.31551509457001586,"score_spread":0.29881531341188616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994938183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868971,0.0026160355,0.000021503263,0.0072319102,0.003007,0.00013796505,0.0000022599718,0.000010418243,0.00007582568],"genre_scores_gemma":[0.9965537,0.002834744,0.00007218095,0.00023386788,0.000076198085,0.000005938166,0.0000042447023,0.000011415876,0.00020767379],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970902,0.0009369589,0.0014387199,0.00017861168,0.000019795207,0.00033568408],"domain_scores_gemma":[0.9977039,0.0012894967,0.00048562454,0.00019864959,0.00027472107,0.00004761208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017455512,0.00015681639,0.000578438,0.00016913541,0.00022393331,0.000017878847,0.00028267803,0.00048009065,0.0001069652],"category_scores_gemma":[0.0014079825,0.00010105926,0.00015216999,0.0001820069,0.0002037313,0.000094434006,0.00016307399,0.0008518121,0.00007210563],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.15646763,0.005403242,0.03183648,0.0000049626756,0.006606084,0.000090766385,0.0013450183,0.00009685709,0.65342957,0.006327384,0.0019877274,0.13640428],"study_design_scores_gemma":[0.013468405,0.008396335,0.68189037,0.000040329436,0.000033157492,0.00025434626,0.0002227521,2.522857e-7,0.0025858656,0.0005267999,0.29245007,0.00013134304],"about_ca_topic_score_codex":0.000103408725,"about_ca_topic_score_gemma":0.0003946667,"teacher_disagreement_score":0.6508437,"about_ca_system_score_codex":0.00008670291,"about_ca_system_score_gemma":0.0001849345,"threshold_uncertainty_score":0.4121077},"labels":[],"label_agreement":null},{"id":"W1994943697","doi":"10.1016/s0966-842x(00)01771-6","title":"The structural basis of CEACAM-receptor targeting by neisserial Opa proteins","year":2000,"lang":"en","type":"review","venue":"Trends in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Biology; Computational biology; Cell biology","score_opus":0.018074665460891495,"score_gpt":0.2961473143931077,"score_spread":0.2780726489322162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994943697","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008601881,0.98627806,4.794342e-7,0.000050066406,0.003088665,0.00044445897,0.0012421997,0.000043728123,0.00025046422],"genre_scores_gemma":[0.0007424797,0.98954886,0.000039516803,0.000008698596,0.00021556958,0.00013927497,0.0055697314,0.000056365945,0.0036794979],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.996536,0.0009967685,0.0012450233,0.00054773246,0.000008276896,0.0006661606],"domain_scores_gemma":[0.998579,0.00029714464,0.0006234219,0.00043981837,0.0000412289,0.000019381167],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033394364,0.00056578533,0.001829403,0.0003300825,0.00027676596,0.000021777549,0.0006384851,0.0011888716,0.005524807],"category_scores_gemma":[0.0000518861,0.00035423657,0.0004991219,0.00049151556,0.0003916772,0.000049749844,0.00014870774,0.00082111737,0.00023297938],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009984179,0.000054878405,0.000013012303,0.0003191509,0.00031052806,3.8423588e-7,0.000040772637,1.7744763e-7,0.10002697,0.000065187014,0.023651667,0.8754174],"study_design_scores_gemma":[0.0005702236,0.00016831614,0.000006019864,0.00047257738,0.00015509041,0.00011465182,0.000013867365,3.8886316e-8,0.0027096746,0.000007294608,0.9954421,0.0003401283],"about_ca_topic_score_codex":0.00030114077,"about_ca_topic_score_gemma":0.00012900223,"teacher_disagreement_score":0.97179043,"about_ca_system_score_codex":0.000085981956,"about_ca_system_score_gemma":0.00010260168,"threshold_uncertainty_score":0.999891},"labels":[],"label_agreement":null},{"id":"W1995031916","doi":"10.1177/0968051907082609","title":"IEIIS Meeting minireview: Bordetella evolution: lipid A and Toll-like receptor 4","year":2007,"lang":"en","type":"article","venue":"Journal of Endotoxin Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Bordetella pertussis; Bordetella bronchiseptica; Bordetella; Context (archaeology); Toll-like receptor; Toll; Biology; Microbiology; Host (biology); TLR4; Immune system; Innate immune system; Immunology; Bacteria; Genetics","score_opus":0.04587070245393406,"score_gpt":0.3622808264592067,"score_spread":0.31641012400527263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995031916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9711439,0.02390074,0.00006922943,0.00061104516,0.0016775453,0.00018693913,0.000004863929,0.000011411924,0.002394298],"genre_scores_gemma":[0.99028254,0.005291768,0.0004386124,0.000032521057,0.0007985887,0.000004835624,0.000002835872,0.00001640995,0.0031318723],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99828523,0.0004507156,0.00058232533,0.0001528425,0.000073566756,0.0004553135],"domain_scores_gemma":[0.99825263,0.00073747896,0.00020291365,0.00015899076,0.0005763915,0.00007161132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005172223,0.00011202668,0.0003108573,0.0004161544,0.00032419845,0.00004078728,0.00018630901,0.00017945921,0.0008372736],"category_scores_gemma":[0.0007669687,0.00008571896,0.00010847607,0.00033973687,0.0001626908,0.00013877866,0.00010775358,0.0007244328,0.00012250549],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033514548,0.00010481532,0.004410974,0.00004084409,0.00009528518,0.00000900359,0.00012160485,2.8284347e-7,0.9470629,0.0002291903,0.031593382,0.015996577],"study_design_scores_gemma":[0.0011381775,0.00070828607,0.005097306,0.00022917142,0.000019064984,0.0009735579,0.0004408699,5.209594e-7,0.12224537,0.00006391899,0.8689739,0.00010987214],"about_ca_topic_score_codex":0.00006574031,"about_ca_topic_score_gemma":0.000049055667,"teacher_disagreement_score":0.8373805,"about_ca_system_score_codex":0.00009010615,"about_ca_system_score_gemma":0.00011253089,"threshold_uncertainty_score":0.9167559},"labels":[],"label_agreement":null},{"id":"W1995071554","doi":"10.1097/01.inf.0000247055.81541.04","title":"The Effect of Changing From Whole-Cell to Acellular Pertussis Vaccine on the Epidemiology of Hospitalized Children With Pertussis in Canada","year":2006,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Dalhousie University; University of British Columbia; BC Children's Hospital","funders":"","keywords":"Medicine; Pertussis vaccine; Incidence (geometry); Epidemiology; Pediatrics; Immunization; Whooping cough; Bordetella pertussis; Vaccination; Immunology; Internal medicine; Antibody","score_opus":0.003444302665933035,"score_gpt":0.18947818100450609,"score_spread":0.18603387833857304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995071554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99399936,0.0028733204,0.000025113979,0.0019073592,0.0005799455,0.00045515958,0.000082972736,0.000011209936,0.000065583095],"genre_scores_gemma":[0.9990605,0.00027504715,0.0000020268449,0.00010052593,0.00039128624,0.00002881073,0.000015744521,0.000019427645,0.00010661785],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978224,0.00096281525,0.00053757115,0.00018404443,0.000051382547,0.00044177266],"domain_scores_gemma":[0.996938,0.0021290255,0.0004749133,0.00032240353,0.00008294943,0.000052721367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009819735,0.00023543878,0.00044921658,0.00017894723,0.0005936802,0.000013535741,0.0003098865,0.00007650107,0.00014429058],"category_scores_gemma":[0.00037569876,0.00009629858,0.00016630512,0.0004683558,0.000052287593,0.000039522267,0.00007408533,0.00043413596,0.000011650786],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063754775,0.000079316866,0.9946141,0.0000071949016,0.00014858977,0.0000015962117,0.000061271065,0.0009350733,0.0011943012,0.000040604482,0.0020606718,0.00021968666],"study_design_scores_gemma":[0.0019653342,0.0006039756,0.99515706,0.000024259127,0.00042478804,0.00005283079,0.00006864228,0.00002128485,0.0011067144,0.00013391516,0.00029354595,0.0001476252],"about_ca_topic_score_codex":0.28378552,"about_ca_topic_score_gemma":0.057308756,"teacher_disagreement_score":0.22647677,"about_ca_system_score_codex":0.00014571418,"about_ca_system_score_gemma":0.00027006055,"threshold_uncertainty_score":0.9598929},"labels":[],"label_agreement":null},{"id":"W1995599504","doi":"10.2460/javma.2002.220.43","title":"Comparative efficacy of an injectable vaccine and an intranasal vaccine in stimulating Bordetella bronchiseptica-reactive antibody responses in seropositive dogs","year":2002,"lang":"en","type":"article","venue":"Journal of the American Veterinary Medical Association","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Bordetella bronchiseptica; Nasal administration; Medicine; Vaccination; Antibody; Immunology; Booster dose; Virology; Immunization; Biology; Bacteria","score_opus":0.02253716371315193,"score_gpt":0.34113852355917335,"score_spread":0.3186013598460214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995599504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99870396,0.0001661915,0.000013813256,0.00068093796,0.0002454424,0.00013794805,0.000009855318,0.000006660556,0.000035213445],"genre_scores_gemma":[0.999594,0.000119539625,0.00008884118,0.000061654326,0.00009378377,0.0000016538089,0.00000499297,0.000008827916,0.000026716396],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99772745,0.0011644837,0.0006507375,0.00015029503,0.00009376196,0.00021325088],"domain_scores_gemma":[0.9978959,0.00087175256,0.00092145323,0.00011655605,0.00014627942,0.0000480724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009451309,0.00013890585,0.0006249053,0.00021230007,0.00008229263,0.000012822914,0.00017280932,0.00012565628,0.00016030739],"category_scores_gemma":[0.0006561644,0.000100451536,0.00006437076,0.00040440302,0.0000723405,0.00030788893,0.00006641498,0.0005720788,0.0000018400614],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037289492,0.0011777965,0.22088297,0.000008722007,0.00018604215,0.000018923398,0.0029561964,0.00009891541,0.76288444,0.000007994405,0.000071970986,0.007977104],"study_design_scores_gemma":[0.0036796224,0.0056396374,0.9845059,0.00013961385,0.000047750735,0.00025645999,0.0007380698,0.0006447054,0.004084836,0.000018330105,0.00012919777,0.00011588553],"about_ca_topic_score_codex":0.00071591634,"about_ca_topic_score_gemma":0.00020844536,"teacher_disagreement_score":0.76362294,"about_ca_system_score_codex":0.00017511022,"about_ca_system_score_gemma":0.000051438885,"threshold_uncertainty_score":0.40962946},"labels":[],"label_agreement":null},{"id":"W1996141674","doi":"10.1016/s0264-410x(00)00333-9","title":"Development of natural immunity to Neisseria meningitidis","year":2001,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":169,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Pfizer","keywords":"Neisseria meningitidis; Immunity; Vaccination; Immunology; Meningococcal disease; Disease; Innate immune system; Meningococcal vaccine; Infectious disease (medical specialty); Medicine; Public health; Immune system; Biology; Immunization; Virology; Bacteria","score_opus":0.03635059591992622,"score_gpt":0.31572996411878407,"score_spread":0.27937936819885784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996141674","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010108078,0.9871952,0.000013978813,0.000012476585,0.0018972132,0.00043778433,0.000028750357,0.00006107842,0.00024544445],"genre_scores_gemma":[0.0004464213,0.9950455,0.00056766876,0.0000083509485,0.000090434405,0.000045460165,0.00068356923,0.000039847793,0.0030727554],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985223,0.00012385954,0.00078265474,0.00026618032,0.00000986237,0.00029513982],"domain_scores_gemma":[0.99911356,0.00007134832,0.00029531028,0.00040300033,0.00009012619,0.000026660904],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018460983,0.0003600922,0.0014103267,0.0002970217,0.00015984329,0.0000115899775,0.0003026454,0.00033789777,0.0017556648],"category_scores_gemma":[0.000052933956,0.00026911355,0.00024178553,0.00051929726,0.000005109211,0.000045334076,0.00021105268,0.0003576723,0.00072532246],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032308286,0.000090466834,0.000009058573,0.0011903308,0.0004710789,4.6467832e-7,0.000100452446,4.661902e-8,0.006842876,0.000051387,0.002010385,0.9892011],"study_design_scores_gemma":[0.0003048811,0.000057239595,0.00014944296,0.001985788,0.00021901884,0.00010693223,0.00001845221,1.3078528e-8,0.0010739152,0.000001920132,0.99580914,0.00027328014],"about_ca_topic_score_codex":0.00009054411,"about_ca_topic_score_gemma":0.000079062826,"teacher_disagreement_score":0.99379873,"about_ca_system_score_codex":0.000067425484,"about_ca_system_score_gemma":0.00016351519,"threshold_uncertainty_score":0.9999761},"labels":[],"label_agreement":null},{"id":"W1996183614","doi":"10.1016/j.resmic.2013.02.002","title":"Regulation of minD by oxyR in Neisseria gonorrhoeae","year":2013,"lang":"en","type":"article","venue":"Research in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Neisseria gonorrhoeae; Biology; Microbiology; Neisseriaceae; Neisseria; Bacteria; Genetics; Antibiotics","score_opus":0.03631164130818591,"score_gpt":0.32955426747956595,"score_spread":0.29324262617138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996183614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703705,0.0010162251,0.0000032224132,0.00052965933,0.00029196774,0.00039925228,0.000029005398,0.0000071235463,0.00068649556],"genre_scores_gemma":[0.99828804,0.00010275015,0.0000390669,0.000010902021,0.000018804978,0.00006114081,0.00022284925,0.00000954128,0.0012469317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99810517,0.0007044239,0.0004025913,0.00027596275,0.0000044147123,0.00050741195],"domain_scores_gemma":[0.9992982,0.00025249025,0.00006416402,0.00023493652,0.00013441975,0.000015794216],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000744012,0.00010675238,0.00027387074,0.0004850342,0.000052143107,0.000010250429,0.00019512499,0.00038021032,0.0038123722],"category_scores_gemma":[0.00009008243,0.00009540706,0.000036157107,0.00047992275,0.00025690102,0.000105481726,0.00010627928,0.00041367774,0.00089399423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006285338,0.00015443515,0.018799933,0.000012637184,0.00001411754,9.7660454e-8,0.00008515844,0.0000024390847,0.9684191,0.00016186261,0.007992869,0.00429452],"study_design_scores_gemma":[0.0023849104,0.000475765,0.26805618,0.00008602828,0.000003367155,0.000075309006,0.00030166036,0.000009659058,0.58456826,0.0011279148,0.14267206,0.00023888596],"about_ca_topic_score_codex":0.0034921875,"about_ca_topic_score_gemma":0.0005975728,"teacher_disagreement_score":0.3838508,"about_ca_system_score_codex":0.000075169795,"about_ca_system_score_gemma":0.000058199217,"threshold_uncertainty_score":0.99988395},"labels":[],"label_agreement":null},{"id":"W1996245849","doi":"10.1016/j.vaccine.2006.09.053","title":"An adolescent–adult formulation tetanus and diptheria toxoids adsorbed combined with acellular pertussis vaccine has comparable immunogenicity but less reactogenicity in children 4–6 years of age than a pediatric formulation acellular pertussis vaccine and diphtheria and tetanus toxoids adsorbed combined with inactivated poliomyelitis vaccine","year":2006,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); Université du Québec; Centre hospitalier universitaire de Québec; University of Manitoba; Université de Montréal; Robarts Clinical Trials; Fraser Health; Children's Hospital of Eastern Ontario; Capital District Health Authority; Dalhousie University","funders":"","keywords":"Diphtheria; Reactogenicity; Medicine; Tetanus; Whooping cough; Vaccination; Booster dose; Immunogenicity; Pediatrics; Immunization; Immunology; Antibody","score_opus":0.008794543224336728,"score_gpt":0.20625956229463446,"score_spread":0.19746501907029773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996245849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941138,0.0029510113,0.000180758,0.0003011144,0.0001334066,0.0019515267,0.00017313381,0.0001810222,0.000014208488],"genre_scores_gemma":[0.99679786,0.00070181274,0.0002612192,0.000027850598,0.00012951772,0.00006339136,0.001783805,0.00012857815,0.00010593675],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99619395,0.0004428155,0.0012824403,0.0010719801,0.00014066855,0.00086816744],"domain_scores_gemma":[0.99767476,0.0001684042,0.0007872708,0.00084789906,0.00036251915,0.00015916285],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00044354223,0.00090610207,0.0016630095,0.0007802277,0.0005099483,0.00015944231,0.00030669992,0.0006004817,0.00013491802],"category_scores_gemma":[0.000057922658,0.0007364416,0.00012500376,0.0011307099,0.000049863913,0.00084808626,0.00019555251,0.00057368394,0.0000030804192],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01012412,0.0008777542,0.5915517,0.000097734366,0.00039755506,0.000010044085,0.0002829536,0.00004476578,0.39569256,0.00011133345,0.00003435439,0.00077514094],"study_design_scores_gemma":[0.029251963,0.0036929976,0.9133155,0.00016751814,0.00065001147,0.00033294773,0.00025313933,0.0005774959,0.05073423,0.00008748546,0.00008129287,0.00085545983],"about_ca_topic_score_codex":0.015110949,"about_ca_topic_score_gemma":0.0059098853,"teacher_disagreement_score":0.34495834,"about_ca_system_score_codex":0.00015413213,"about_ca_system_score_gemma":0.000085470616,"threshold_uncertainty_score":0.9995087},"labels":[],"label_agreement":null},{"id":"W1996534428","doi":"10.1016/j.carres.2011.04.030","title":"Detailed structural features of lipopolysaccharide glycoforms in nontypeable Haemophilus influenzae strain 2019","year":2011,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Medical Research Council; Vetenskapsrådet","keywords":"Heptose; Chemistry; Haemophilus influenzae; Mutant; Lipid A; Strain (injury); Lipopolysaccharide; Moiety; Stereochemistry; Galactose; Escherichia coli; Substituent; Biochemistry; Residue (chemistry); Antibiotics","score_opus":0.05421420195470463,"score_gpt":0.3183545655180147,"score_spread":0.2641403635633101,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996534428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959945,0.0012303719,0.000001422891,0.00003850941,0.00056644337,0.00031888703,0.00006749575,0.0000321333,0.0017502181],"genre_scores_gemma":[0.9984611,0.00009958938,0.000034869972,0.000009813871,0.00004943183,0.000028986566,0.000047743695,0.000019711815,0.0012487189],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983776,0.00028434498,0.0003673371,0.00028853022,0.0000490117,0.0006331706],"domain_scores_gemma":[0.99916595,0.000097718774,0.00007810175,0.000389229,0.00022816063,0.000040849813],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00068677345,0.00016442421,0.00033549935,0.0005294039,0.00015360361,0.00002074481,0.00033211024,0.00030910526,0.0012316997],"category_scores_gemma":[0.000120055374,0.00012862375,0.00008085806,0.00040688243,0.00025985425,0.00019233843,0.00017090733,0.0006619076,0.00019497055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034733812,0.000060900085,0.023458794,0.000029260782,0.00007194736,0.0000061590695,0.0006507842,0.0000032817613,0.9705664,0.0029838944,0.0003269242,0.0014943011],"study_design_scores_gemma":[0.0015531722,0.00038417074,0.26553652,0.00006109451,0.00001479593,0.00003683517,0.0002848113,0.0000071881223,0.72887015,0.0025970815,0.00042365445,0.00023054742],"about_ca_topic_score_codex":0.0056795957,"about_ca_topic_score_gemma":0.002076534,"teacher_disagreement_score":0.24207772,"about_ca_system_score_codex":0.00006080291,"about_ca_system_score_gemma":0.00012532971,"threshold_uncertainty_score":0.9996813},"labels":[],"label_agreement":null},{"id":"W1997253251","doi":"10.4161/hv.22553","title":"Bordetella<i>pertussis</i>infection in a child with completed primary immunization","year":2013,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Society of Microbiologists","funders":"","keywords":"Medicine; Pediatrics; Immunization; Whooping cough; Vomiting; Vaccination; Immunology; Internal medicine; Antibody","score_opus":0.013014090213434627,"score_gpt":0.23108979919525308,"score_spread":0.21807570898181844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997253251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944043,0.001468961,0.00025577316,0.0003598274,0.00048479426,0.00068440696,0.00000587055,0.00022789104,0.0021081383],"genre_scores_gemma":[0.9972246,0.00046565375,0.0000585037,0.0003425972,0.000075176285,0.00011467935,0.00033573844,0.00006691991,0.0013161015],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998523,0.00018333302,0.0005106091,0.00032701626,0.000028693968,0.00042733192],"domain_scores_gemma":[0.9990411,0.00005673598,0.00019567617,0.00049465196,0.00019326677,0.000018616594],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012317284,0.00033450287,0.00040661643,0.0003118063,0.00048099313,0.0000953623,0.00019290751,0.00025665757,0.0024983366],"category_scores_gemma":[0.000007060583,0.00024143462,0.000083610954,0.0004788309,0.00006631564,0.0003297329,0.00006068878,0.00038507118,0.00036554257],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024865396,0.0006696565,0.10511724,0.000052931668,0.0003874142,0.000001353864,0.0005065942,0.000047612877,0.8736602,0.0005428326,0.0005808596,0.018184619],"study_design_scores_gemma":[0.0046389336,0.00052086794,0.92195565,0.00013007935,0.00007494916,0.0002406465,0.00008037006,0.000029361572,0.011907018,0.00016035102,0.059725128,0.0005366674],"about_ca_topic_score_codex":0.002945912,"about_ca_topic_score_gemma":0.00062343234,"teacher_disagreement_score":0.8617532,"about_ca_system_score_codex":0.00009382821,"about_ca_system_score_gemma":0.00003081946,"threshold_uncertainty_score":0.9984135},"labels":[],"label_agreement":null},{"id":"W1997788934","doi":"10.1074/jbc.m513904200","title":"Complete Structures of Bordetella bronchiseptica and Bordetella parapertussis Lipopolysaccharides","year":2006,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institute for Biological Sciences","funders":"National Institutes of Health","keywords":"Bordetella bronchiseptica; Bordetella; Lipopolysaccharide; Bacteria; Microbiology; Chemical structure; Chemistry; Biochemistry; Microorganism; Stereochemistry; Biology; Bordetella pertussis; Organic chemistry; Genetics; Immunology","score_opus":0.01575456087534983,"score_gpt":0.2373885470707552,"score_spread":0.2216339861954054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997788934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99447215,0.0043010665,0.00002150257,0.00012212794,0.00019324728,0.000033575616,0.000030831383,0.000010745857,0.00081475405],"genre_scores_gemma":[0.9989918,0.00041666484,0.00021892623,0.0000212511,0.0001855262,7.710232e-7,0.0000146493585,0.0000054473153,0.00014498997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991186,0.00004940488,0.00051036663,0.0001303726,0.000019073093,0.00017215086],"domain_scores_gemma":[0.9992186,0.00016740139,0.00037260458,0.000106252905,0.00010763544,0.000027502794],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012119241,0.00014374663,0.00040055814,0.00003284571,0.00007646511,0.000013581693,0.00013840708,0.0002775267,0.0010496118],"category_scores_gemma":[0.00009351714,0.00009064139,0.00014005581,0.000067281224,0.00026306036,0.000034429562,0.00005309409,0.00023708858,0.0000030903605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001583313,0.00007203334,0.011531483,0.00002084353,0.00007644766,0.0000018129563,0.000008564383,0.000002190085,0.9850203,0.00008898044,0.00062992994,0.0023891078],"study_design_scores_gemma":[0.0008674467,0.00033310577,0.043311596,0.000029898189,0.000057707523,0.00050458923,0.000053183096,0.0000012649069,0.91748184,0.0014845455,0.03571527,0.00015955808],"about_ca_topic_score_codex":0.000045886383,"about_ca_topic_score_gemma":0.0000018331597,"teacher_disagreement_score":0.06753844,"about_ca_system_score_codex":0.000011254727,"about_ca_system_score_gemma":0.000022975966,"threshold_uncertainty_score":0.99986356},"labels":[],"label_agreement":null},{"id":"W1997943249","doi":"10.1016/j.chom.2014.04.001","title":"The Immune Receptor NOD1 and Kinase RIP2 Interact with Bacterial Peptidoglycan on Early Endosomes to Promote Autophagy and Inflammatory Signaling","year":2014,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":247,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"NOD1; Endosome; Autophagy; Cell biology; Peptidoglycan; Biology; Innate immune system; Intracellular; Autophagosome; Cytosol; Signal transduction; Immune system; Immunology; Biochemistry; NOD2; Apoptosis; Enzyme","score_opus":0.0041324131341136695,"score_gpt":0.19439520926717987,"score_spread":0.1902627961330662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997943249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997461,0.0005918764,0.000011853788,0.0002306519,0.001058951,0.00038006733,0.000020993626,0.000059140548,0.00018546161],"genre_scores_gemma":[0.99805397,0.0000684846,0.00009535064,0.00008152627,0.00017248005,0.0000315765,0.000025000703,0.000032922333,0.0014386942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886256,0.0001601175,0.00026881692,0.00034732808,0.000015534151,0.00034561259],"domain_scores_gemma":[0.9993382,0.00013220473,0.00012902424,0.00028518238,0.00006323484,0.00005216725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022626379,0.00025691965,0.0002694426,0.000085781525,0.00047864774,0.00015385612,0.00014371033,0.00014521921,0.00018439251],"category_scores_gemma":[0.000036996633,0.00017155033,0.000044774435,0.00007530319,0.00014085625,0.00010633107,0.0001332421,0.00025752236,0.0001875999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006728979,0.000048016962,0.00060629635,0.000021684476,0.000054197513,8.868545e-7,0.0006400667,3.4020707e-7,0.99334264,0.00009674896,0.00025605384,0.004260147],"study_design_scores_gemma":[0.0012308145,0.00079352094,0.009526916,0.000102620186,0.000024879424,0.000032378462,0.000058379985,4.662432e-7,0.80463386,0.0000047341214,0.18338895,0.0002025035],"about_ca_topic_score_codex":0.00014765168,"about_ca_topic_score_gemma":0.00005325518,"teacher_disagreement_score":0.18870883,"about_ca_system_score_codex":0.000024983903,"about_ca_system_score_gemma":0.000027349108,"threshold_uncertainty_score":0.69956195},"labels":[],"label_agreement":null},{"id":"W1997984718","doi":"10.1186/1756-0500-7-727","title":"Investigating genome reduction of Bordetella pertussis using a multiplex PCR-based reverse line blot assay (mPCR/RLB)","year":2014,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; Centers for Disease Control and Prevention; Medical Research Council; Public Health Agency; Public Health Agency of Canada","keywords":"Bordetella pertussis; Whooping cough; Biology; Multiplex polymerase chain reaction; Gene; Genome; Multiplex; Microbiology; Genetics; Polymerase chain reaction; Virology; Bacteria","score_opus":0.20308211983063162,"score_gpt":0.38535427618467,"score_spread":0.18227215635403837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997984718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958579,0.00034558796,0.0026374713,0.0002738869,0.00038906813,0.00029863327,0.000024886367,0.00005620265,0.000116388095],"genre_scores_gemma":[0.99381876,0.000027274646,0.00539509,0.000016007416,0.00026737482,0.000021433465,0.000073524796,0.00002631151,0.00035419755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99708265,0.0016298261,0.00041932182,0.000344135,0.00006437306,0.00045968153],"domain_scores_gemma":[0.9974545,0.0014484492,0.00015894638,0.0004022037,0.00048436562,0.00005153665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029655166,0.00015719827,0.00030026227,0.00038041605,0.00045849875,0.00003544737,0.0001856952,0.00025161763,0.0004230218],"category_scores_gemma":[0.0063169682,0.00013598337,0.00010873784,0.00049585465,0.00038124793,0.00010699499,0.00011488602,0.00041784142,0.00008095826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083471234,0.000116567564,0.008212719,0.000085660446,0.000038022616,1.3636905e-7,0.00013033311,0.0005370906,0.9880008,0.000071243405,0.00013647352,0.0025874705],"study_design_scores_gemma":[0.0018892308,0.0005965227,0.016609734,0.0002012353,0.00004587694,0.000033172157,0.0002383137,0.006958003,0.9560858,0.00022746863,0.016803784,0.0003108655],"about_ca_topic_score_codex":0.0031361508,"about_ca_topic_score_gemma":0.00018151641,"teacher_disagreement_score":0.031915016,"about_ca_system_score_codex":0.00006300529,"about_ca_system_score_gemma":0.00020576826,"threshold_uncertainty_score":0.75624573},"labels":[],"label_agreement":null},{"id":"W1998275346","doi":"10.3402/ijch.v66i5.18308","title":"Vaccination policy and programs in the circumpolar world","year":2007,"lang":"en","type":"editorial","venue":"International Journal of Circumpolar Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Circumpolar star; Vaccination; Geography; Psychology; Medicine; Virology; Oceanography","score_opus":0.023399040853028567,"score_gpt":0.34255743027208124,"score_spread":0.31915838941905267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998275346","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028441733,0.010487501,0.00018604485,0.006649539,0.953212,0.0004862513,0.00013271307,0.000025322477,0.0003788967],"genre_scores_gemma":[0.33679858,0.0053871158,0.000060506558,0.0009871507,0.65573496,0.000013547253,0.0006388221,0.00005539862,0.00032395226],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99748105,0.00051168614,0.0011546375,0.00022429178,0.00025202095,0.00037631506],"domain_scores_gemma":[0.99682194,0.00079451397,0.0012499219,0.00018779565,0.0008928371,0.000053006122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032916355,0.0002561095,0.0005141606,0.0015784707,0.00014067556,0.00014986184,0.000707682,0.0005145701,0.0000855073],"category_scores_gemma":[0.0012094365,0.0001913318,0.00016680038,0.00037875562,0.000058779886,0.00027017487,0.00006684016,0.0020171916,0.00001811519],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036898846,0.00066543516,0.0036388389,0.00011755563,0.0004809467,0.000036645484,0.0030857408,0.0000013963487,0.0011144672,0.0025351043,0.845582,0.14237288],"study_design_scores_gemma":[0.0015191853,0.00031511905,0.014400421,0.0002643617,0.00002474048,0.0004099588,0.00022475046,2.9749265e-7,0.00003571946,0.0006126117,0.98203826,0.00015460221],"about_ca_topic_score_codex":0.0017412467,"about_ca_topic_score_gemma":0.0011417787,"teacher_disagreement_score":0.30835682,"about_ca_system_score_codex":0.00054068153,"about_ca_system_score_gemma":0.0015072251,"threshold_uncertainty_score":0.8763806},"labels":[],"label_agreement":null},{"id":"W1998456347","doi":"10.1006/mcpr.2001.0403","title":"Integration host factor interactions with Neisseria gene sequences: correlation between predicted binding sites and in vitro binding of Neisseria -derived IHF protein","year":2002,"lang":"en","type":"article","venue":"Molecular and Cellular Probes","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Science Foundation","keywords":"Biology; Binding site; Host factor; Neisseria; Gene; Genetics; Computational biology; Neisseria gonorrhoeae; Sigma factor; Escherichia coli; Molecular biology; Bacteria","score_opus":0.015315272689806531,"score_gpt":0.2175503184295963,"score_spread":0.20223504573978976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998456347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959112,0.0005965689,0.002734781,0.000050984094,0.0000871222,0.0005032855,0.00004978031,0.000035260146,0.000031056083],"genre_scores_gemma":[0.9991778,0.0000279313,0.00030259212,0.0000026874743,0.000014412937,0.000044382294,0.00029525586,0.000015593265,0.00011933845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991725,0.00012664478,0.0002741907,0.00024429534,0.000015043036,0.00016733457],"domain_scores_gemma":[0.99964,0.000029164989,0.00014630907,0.00010953452,0.00005249093,0.000022538568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007019549,0.00016737287,0.0002418022,0.00021299571,0.00013086353,0.000043053635,0.000043056123,0.00013884195,0.000112305206],"category_scores_gemma":[0.00002486007,0.0001381777,0.000030689822,0.00022204395,0.000080121055,0.00021559822,0.000030174637,0.00016397503,0.0000045845227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008374048,0.000049855204,0.011149352,0.000030112506,0.000068204674,0.0000015912035,0.0004619589,0.0000036725305,0.9875504,0.00003113288,0.000001616754,0.00056839583],"study_design_scores_gemma":[0.00068627036,0.00020068152,0.006858521,0.00011095452,0.000049480866,0.000027198515,0.00020542677,0.00014258536,0.9915042,0.000021814336,0.000043086748,0.0001497674],"about_ca_topic_score_codex":0.00010938253,"about_ca_topic_score_gemma":0.000048347138,"teacher_disagreement_score":0.0042908313,"about_ca_system_score_codex":0.000021101645,"about_ca_system_score_gemma":0.000011035967,"threshold_uncertainty_score":0.56347233},"labels":[],"label_agreement":null},{"id":"W1998870117","doi":"10.1016/j.vaccine.2004.04.025","title":"Economic evaluation of an extended acellular pertussis vaccine programme for adolescents in Ontario, Canada","year":2004,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Brock University; PharmIdeas (Canada)","funders":"","keywords":"Medicine; Diphtheria; Whooping cough; Pediatrics; Vaccination; Cost effectiveness; Booster dose; Cohort; Booster (rocketry); Tetanus; Immunization; Cost-effectiveness analysis; Immunology; Internal medicine","score_opus":0.020800502769307765,"score_gpt":0.25204701649256933,"score_spread":0.23124651372326158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998870117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978242,0.00024984946,0.000024303095,0.00023984922,0.0008484333,0.0007451232,0.000024717623,0.000017647864,0.000025873955],"genre_scores_gemma":[0.9992794,0.0000061812984,0.000103970706,0.000025213814,0.00004161286,0.000066639186,0.000317606,0.000014761286,0.00014462053],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990069,0.000068797606,0.00037369,0.0002515877,0.000020023941,0.0002789917],"domain_scores_gemma":[0.9994595,0.0000152200355,0.0001307219,0.00024433623,0.0001231093,0.000027116414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037909127,0.0001465805,0.00028640145,0.000108951586,0.00006674353,0.000007728386,0.00011576331,0.00012843107,0.00083075534],"category_scores_gemma":[0.000036197376,0.00013180802,0.00005259047,0.00006953717,0.0000033529686,0.00011022212,0.000024320303,0.00011468704,0.000008508843],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026979041,0.002332757,0.28847542,0.00012895654,0.0003810616,0.000002679093,0.0007072663,0.0029183845,0.6423208,0.00061573565,0.0016631694,0.05775588],"study_design_scores_gemma":[0.018848592,0.0006276897,0.880183,0.000089780195,0.0001671249,0.000029212326,0.00015841957,0.00011474942,0.08685146,0.00047601789,0.012176372,0.00027760686],"about_ca_topic_score_codex":0.9449315,"about_ca_topic_score_gemma":0.9976272,"teacher_disagreement_score":0.5917075,"about_ca_system_score_codex":0.00075435283,"about_ca_system_score_gemma":0.0010174364,"threshold_uncertainty_score":0.90961885},"labels":[],"label_agreement":null},{"id":"W1999301432","doi":"10.1016/j.vaccine.2005.11.012","title":"Interchangeability of two diphtheria and tetanus toxoids, acellular pertussis, inactivated poliovirus, Haemophilus influenzae type b conjugate vaccines as a fourth dose in 15–20-month-old toddlers","year":2005,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GlaxoSmithKline (Canada); Children's Hospital of Eastern Ontario; Institut National de Santé Publique du Québec; Izaak Walton Killam Health Centre; University of Manitoba; Centre Hospitalier Universitaire Sainte-Justine; Dalhousie University","funders":"Dalhousie University; University of Rochester; GlaxoSmithKline","keywords":"Medicine; Tetanus; Diphtheria; Inactivated Poliovirus Vaccine; Poliovirus; Vaccination; Toxoid; Whooping cough; Filamentous haemagglutinin adhesin; Pediatrics; Virology; Immunology; Internal medicine; Pertussis toxin; Virus","score_opus":0.01885290045254299,"score_gpt":0.27054668726908193,"score_spread":0.2516937868165389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999301432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99323547,0.0040942193,0.0000043189557,0.0012303662,0.0005726847,0.0005016511,0.00004721131,0.000077376724,0.00023670678],"genre_scores_gemma":[0.9982167,0.00047366132,0.00008596568,0.0002039785,0.00014131144,0.00001988838,0.000097649514,0.000035458615,0.00072538387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99810106,0.00025550296,0.00066918513,0.0004849037,0.000030179306,0.00045917017],"domain_scores_gemma":[0.9988759,0.00014175728,0.00023329777,0.0005115563,0.00017252506,0.00006493195],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033984086,0.00037032037,0.0007125546,0.00035051777,0.00011591452,0.000026807673,0.00021818129,0.00030378986,0.0019261789],"category_scores_gemma":[0.00022368167,0.00030607588,0.00009480901,0.0005206616,0.00004618522,0.00029295508,0.00021051517,0.00035465733,0.000098305536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023669526,0.0004525615,0.09815236,0.00005524345,0.00023737921,0.0000055880105,0.00075200456,0.000035195866,0.8894901,0.00025684948,0.0007121814,0.0074835727],"study_design_scores_gemma":[0.022349358,0.0024217924,0.37078768,0.0003303038,0.0002675615,0.00042161628,0.0006439753,0.00013781556,0.47741452,0.00081698055,0.12320669,0.0012017055],"about_ca_topic_score_codex":0.005907417,"about_ca_topic_score_gemma":0.0038237518,"teacher_disagreement_score":0.41207558,"about_ca_system_score_codex":0.00010119907,"about_ca_system_score_gemma":0.00006271128,"threshold_uncertainty_score":0.99993914},"labels":[],"label_agreement":null},{"id":"W1999949310","doi":"10.1097/00006454-200004000-00003","title":"Adult formulation of a five component acellular pertussis vaccine combined with diphtheria and tetanus toxoids and inactivated poliovirus vaccine is safe and immunogenic in adolescents and adults","year":2000,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Grace (Canada); Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Pertactin; Diphtheria; Filamentous haemagglutinin adhesin; Medicine; Tetanus; Inactivated Poliovirus Vaccine; Whooping cough; Vaccination; Bordetella pertussis; Immunization; Immunology; Virology; Pediatrics; Antibody; Pertussis toxin; Internal medicine; Biology","score_opus":0.003228818249354488,"score_gpt":0.19510184196543653,"score_spread":0.19187302371608206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999949310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99397635,0.0052279592,0.0000063612324,0.00024833245,0.00010157134,0.00037555763,0.00003394687,0.000015988942,0.000013920545],"genre_scores_gemma":[0.9915443,0.008245998,0.0000063320854,0.000051228246,0.000077439254,0.0000104708615,0.000012427808,0.000016940357,0.00003488385],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891204,0.00019691123,0.00038926044,0.00021707834,0.000035788296,0.0002489226],"domain_scores_gemma":[0.9993604,0.0000698232,0.0002227457,0.00014444129,0.000115064475,0.00008754145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001641082,0.00023378672,0.00034796793,0.00022512655,0.00036088124,0.000045213455,0.000057368485,0.00011362352,0.00018747793],"category_scores_gemma":[0.00003727217,0.00015201485,0.000042133037,0.00024417846,0.00004652062,0.00019291665,0.000056891946,0.0003012497,0.000002196078],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009892321,0.00042770404,0.9692677,0.00012547392,0.00021810016,0.00000708455,0.0011082962,0.000012407841,0.01262023,0.0000145354325,0.00005043362,0.006255715],"study_design_scores_gemma":[0.011332134,0.0008664533,0.98536277,0.00011939196,0.00039152804,0.0008716641,0.00016437031,0.00012648778,0.00034512632,0.00016351322,0.000048257596,0.000208292],"about_ca_topic_score_codex":0.00084497663,"about_ca_topic_score_gemma":0.00011114718,"teacher_disagreement_score":0.016095083,"about_ca_system_score_codex":0.000037756723,"about_ca_system_score_gemma":0.00004349928,"threshold_uncertainty_score":0.61989856},"labels":[],"label_agreement":null},{"id":"W2000644795","doi":"10.1080/00365540310016042","title":"Neisserial Opa Proteins: Impact on Colonization, Dissemination and Immunity","year":2003,"lang":"en","type":"review","venue":"Scandinavian Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Health Canada","keywords":"Biology; Transcytosis; Vitronectin; Neisseria; Cell biology; Bacterial adhesin; Receptor; Neisseria meningitidis; Microbiology; Extracellular matrix; Fibronectin; Gene; Genetics; Bacteria; Virulence; Endocytosis","score_opus":0.012761948917696084,"score_gpt":0.31554694622239465,"score_spread":0.30278499730469854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000644795","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04489527,0.9518016,0.000022192111,0.000006928178,0.0022724548,0.00061731436,0.00021306826,0.0000321418,0.00013901963],"genre_scores_gemma":[0.06954303,0.9296798,0.0000033746337,0.0000065788536,0.0002713823,0.000038130103,0.00020707608,0.000047037956,0.0002035528],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997984,0.00070433674,0.0007928276,0.0002161491,0.00003634688,0.0002663258],"domain_scores_gemma":[0.99791443,0.00024157252,0.0012044944,0.00023147468,0.0003109214,0.000097130025],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002494428,0.00045675767,0.0013632721,0.0005403496,0.00037548292,0.00012410023,0.000158412,0.00037242658,0.0006372927],"category_scores_gemma":[0.00037980193,0.00031100292,0.0005644277,0.00039591678,0.000118674165,0.00021934953,0.000034761957,0.000530483,0.000038433773],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007467261,0.0024536073,0.011565468,0.0054361,0.0038326678,0.000036913247,0.00024042356,0.000011041323,0.0005109004,0.00057722064,0.00905886,0.9655301],"study_design_scores_gemma":[0.0043397844,0.008790565,0.014128417,0.033207733,0.0064527537,0.009068368,0.00010321302,2.897089e-7,0.00013592583,0.0007164426,0.9214583,0.0015981843],"about_ca_topic_score_codex":0.000028069739,"about_ca_topic_score_gemma":0.0000035779876,"teacher_disagreement_score":0.96393186,"about_ca_system_score_codex":0.00026057308,"about_ca_system_score_gemma":0.00032651544,"threshold_uncertainty_score":0.9999342},"labels":[],"label_agreement":null},{"id":"W2000927427","doi":"10.1016/j.tvjl.2015.02.006","title":"How well do vaccines for Bordetella bronchiseptica work in dogs? A critical review of the literature 1977–2014","year":2015,"lang":"en","type":"review","venue":"The Veterinary Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Bordetella bronchiseptica; Bordetella; Immunity; Immune system; Immunology; Medicine; Longevity; Herd immunity; Disease; Vaccination; Biology; Intensive care medicine; Bordetella pertussis; Internal medicine; Gerontology","score_opus":0.05606437402129299,"score_gpt":0.34617008842448344,"score_spread":0.29010571440319044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000927427","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026289935,0.99310124,0.0000062877984,0.0018978311,0.0036201323,0.0008719464,0.00008559792,0.000011367322,0.00014269845],"genre_scores_gemma":[0.00026327468,0.9976779,0.000055809858,0.00008141127,0.0005953972,0.000084769075,0.000034584853,0.000042778633,0.0011640305],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99713373,0.001351706,0.0008186505,0.0002581642,0.000040239123,0.00039749636],"domain_scores_gemma":[0.9979338,0.0005782456,0.000546759,0.0006285435,0.00027210618,0.00004055828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012495823,0.00042868362,0.0015601356,0.00014633893,0.00026966428,0.00013092278,0.0008194618,0.00047206559,0.00038534994],"category_scores_gemma":[0.00042101592,0.00019635764,0.00092475396,0.00043983723,0.00013984251,0.00011395964,0.00024804464,0.0013091258,0.00004275577],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004994871,0.00030711544,0.0000133116,0.06905,0.0006331922,0.000021757403,0.00019816341,1.3809328e-7,0.00040987885,0.00027931077,0.2231091,0.70547855],"study_design_scores_gemma":[0.0003476289,0.00047191407,0.000014626325,0.095963165,0.0005789606,0.0060698176,0.000011686959,2.3265725e-8,0.0000025148806,0.00015423835,0.8961872,0.0001982144],"about_ca_topic_score_codex":0.0000028221777,"about_ca_topic_score_gemma":0.0000013214184,"teacher_disagreement_score":0.7052803,"about_ca_system_score_codex":0.000063043786,"about_ca_system_score_gemma":0.00020726799,"threshold_uncertainty_score":0.8007232},"labels":[],"label_agreement":null},{"id":"W2001287907","doi":"10.1186/cc12766","title":"A simple meningococcal sepsis prognostic score: focusing on the human animal","year":2013,"lang":"en","type":"letter","venue":"Critical Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stollery Children's Hospital; University of Alberta","funders":"","keywords":"Medicine; Sepsis; Intensive care medicine; Meningococcal Infections; Meningococcal disease; Internal medicine; Neisseria meningitidis","score_opus":0.04431264583884442,"score_gpt":0.30467300653641505,"score_spread":0.2603603606975706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001287907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6475807,0.0009338188,0.000010625522,0.34490377,0.0018496026,0.00085100177,0.00028119737,0.00022491574,0.00336437],"genre_scores_gemma":[0.9153028,0.0000017600565,0.0000064652113,0.08079038,0.0023230314,0.00021545454,0.0008303695,0.00005818665,0.0004715406],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99835473,0.0003068823,0.00028038095,0.0004414292,0.00003195968,0.0005846106],"domain_scores_gemma":[0.99843043,0.0008266787,0.00004996802,0.00041716394,0.00025281112,0.000022938642],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006689861,0.0003426271,0.0003931754,0.00008524051,0.00074118754,0.00015024486,0.00026877256,0.0010883521,0.0051264735],"category_scores_gemma":[0.00046493934,0.00022649585,0.00020749783,0.00009008348,0.0003324273,0.000058837737,0.00014176672,0.0019189345,0.0010945774],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012023717,0.000033612636,0.0005900764,0.0001607184,0.00007484381,0.000019870411,0.00013786108,4.0103416e-8,0.043176394,0.0030100099,0.9524887,0.00029581392],"study_design_scores_gemma":[0.00031539737,0.00067376334,0.0024669247,0.00019631378,0.00026627787,0.00006568908,0.00024933103,4.106127e-7,0.0064405054,0.0006497647,0.9882119,0.0004636948],"about_ca_topic_score_codex":0.00016779004,"about_ca_topic_score_gemma":0.000011186276,"teacher_disagreement_score":0.2677221,"about_ca_system_score_codex":0.00006513325,"about_ca_system_score_gemma":0.000042426178,"threshold_uncertainty_score":0.9996832},"labels":[],"label_agreement":null},{"id":"W2001893708","doi":"10.1074/jbc.m807729200","title":"Post-assembly Modification of Bordetella bronchiseptica O Polysaccharide by a Novel Periplasmic Enzyme Encoded by wbmE","year":2008,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Institute for Biological Sciences","funders":"Wellcome Trust","keywords":"Periplasmic space; Bordetella bronchiseptica; Microbiology; Polysaccharide; Biochemistry; Chemistry; Enzyme; Biology; Bacteria; Gene; Escherichia coli; Genetics","score_opus":0.021242366891924578,"score_gpt":0.2435015311416142,"score_spread":0.22225916424968964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001893708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99696183,0.0018175786,0.00024766775,0.0002689025,0.00020915864,0.000054936503,0.00015375316,0.000017599868,0.0002685836],"genre_scores_gemma":[0.99839973,0.00056658644,0.00011682796,0.00005110974,0.00007947938,0.000003082363,0.000067221,0.000008423161,0.0007075251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988842,0.000047958314,0.00063379254,0.000178232,0.00003075125,0.00022504256],"domain_scores_gemma":[0.99890584,0.0001145503,0.00054193736,0.00015512206,0.00023181674,0.000050747884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015716953,0.00017327082,0.00040959127,0.00003216048,0.00011045327,0.000007765211,0.0002509043,0.00042941162,0.0007298729],"category_scores_gemma":[0.00019924044,0.00012342648,0.00019669057,0.0000910111,0.00018889793,0.00007236747,0.00004352668,0.00035712586,0.000016702419],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028602287,0.00044148223,0.000989019,0.000011010018,0.00009413415,0.0000011559874,0.000041605876,0.0000015325165,0.99277246,0.000006383133,0.0051307743,0.0002244299],"study_design_scores_gemma":[0.00096251984,0.0003945256,0.0016354147,0.00001688676,0.00002778958,0.0008496196,0.00005871262,0.000003431378,0.98649436,0.0000099536355,0.009406661,0.0001401096],"about_ca_topic_score_codex":0.000036060395,"about_ca_topic_score_gemma":3.5694472e-7,"teacher_disagreement_score":0.0062780734,"about_ca_system_score_codex":0.000041917512,"about_ca_system_score_gemma":0.00007253168,"threshold_uncertainty_score":0.79915965},"labels":[],"label_agreement":null},{"id":"W2002226074","doi":"10.1002/mbo3.254","title":"Patterns of structural and sequence variation within isotype lineages of the <i>Neisseria meningitidis</i> transferrin receptor system","year":2015,"lang":"en","type":"article","venue":"MicrobiologyOpen","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates","keywords":"Neisseria meningitidis; Transferrin; Biology; Isotype; Sequence (biology); Transferrin receptor; Genetics; Neisseria; Evolutionary biology; Virology; Microbiology; Receptor; Antibody; Monoclonal antibody; Bacteria","score_opus":0.02293676730365892,"score_gpt":0.24223272877928814,"score_spread":0.21929596147562921,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002226074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973222,0.00035247894,0.000049551178,0.00010725115,0.0015367037,0.00027028017,0.0002900761,0.000022501285,0.000048968705],"genre_scores_gemma":[0.9995026,0.000009402651,0.00010223259,0.000015703701,0.000028092863,0.000008212886,0.00009340227,0.000008735411,0.0002316207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990452,0.00027059202,0.0003613181,0.00018066296,0.0000069051007,0.00013533748],"domain_scores_gemma":[0.99941427,0.000041602885,0.00020266656,0.00020694772,0.00012037133,0.000014136841],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002698039,0.00012703182,0.00029266177,0.000039368886,0.00007513534,0.000007687223,0.00019842968,0.00019476337,0.00007926514],"category_scores_gemma":[0.000034011224,0.00008217799,0.000048330316,0.00008758208,0.00010346242,0.000072679286,0.000085621075,0.0001233862,0.000010756696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011137911,0.000012048307,0.029277481,0.000044677618,0.00007701447,5.3439212e-8,0.00084645674,0.0000066410526,0.9687121,0.00068167073,0.00014284792,0.00008765604],"study_design_scores_gemma":[0.0012458572,0.00027778,0.045575466,0.00012490078,0.00006818809,0.00015203886,0.0006719947,0.0000050965123,0.94957024,0.00002697821,0.0021343266,0.0001471428],"about_ca_topic_score_codex":0.0009655212,"about_ca_topic_score_gemma":0.00015441993,"teacher_disagreement_score":0.019141844,"about_ca_system_score_codex":0.000022683302,"about_ca_system_score_gemma":0.000056510522,"threshold_uncertainty_score":0.3351121},"labels":[],"label_agreement":null},{"id":"W2003004797","doi":"10.1007/s100960000290","title":"Novel Genus-Specific PCR-Based Assays for Rapid Identification of Neisseria Species and Neisseria meningitidis","year":2000,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Neisseria meningitidis; Neisseria; Biology; Microbiology; Neisseriaceae; Polymerase chain reaction; Multiplex polymerase chain reaction; Bacteria; Gene; Genetics; Antibiotics","score_opus":0.03680848617069772,"score_gpt":0.2931701521288892,"score_spread":0.2563616659581915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003004797","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99190557,0.002852404,0.0017201424,0.00017228986,0.002274852,0.00026012733,0.0004074396,0.000044229902,0.00036294523],"genre_scores_gemma":[0.99770343,0.0010896481,0.0001511558,0.0001063671,0.00045965012,0.000005087411,0.00015011517,0.00003854025,0.00029599556],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963959,0.00093440217,0.0020242857,0.00034232193,0.000011376153,0.00029174585],"domain_scores_gemma":[0.99712616,0.0008633264,0.0012459263,0.0002872103,0.00039364456,0.00008371208],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013703903,0.0002627385,0.00080845074,0.00018743207,0.00022789827,0.000045125315,0.00024993744,0.00016872401,0.0014283698],"category_scores_gemma":[0.00053029496,0.00021973802,0.0005349552,0.0001496463,0.00051445584,0.00015241245,0.000032673604,0.00030992788,0.00007156171],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013424535,0.0008775616,0.0154806785,0.000034531266,0.0004251908,0.0000017655486,0.000040675928,0.000045913705,0.95382166,0.000114435206,0.003547273,0.024267847],"study_design_scores_gemma":[0.012404673,0.004658967,0.45216608,0.00016599458,0.00068157073,0.00084947253,0.00008571684,0.0000066136295,0.04983095,0.00011694572,0.47848648,0.00054653635],"about_ca_topic_score_codex":0.000003956118,"about_ca_topic_score_gemma":0.00000287614,"teacher_disagreement_score":0.90399075,"about_ca_system_score_codex":0.000018867759,"about_ca_system_score_gemma":0.000094329145,"threshold_uncertainty_score":0.9994845},"labels":[],"label_agreement":null},{"id":"W2003006547","doi":"10.1016/s0264-410x(03)00173-7","title":"Nature, evolution, and appraisal of adverse events and antibody response associated with the fifth consecutive dose of a five-component acellular pertussis-based combination vaccine","year":2003,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fraser Health; McGill University; University of British Columbia; Dalhousie University; Izaak Walton Killam Health Centre","funders":"Clinical Trial Center, China Medical University Hospital","keywords":"Medicine; Pertussis vaccine; Adverse effect; Injection site; Immunization; Vaccination; Bordetella pertussis; Whooping cough; Pediatrics; Immunology; Antibody; Internal medicine","score_opus":0.005587724684857598,"score_gpt":0.24573256277445926,"score_spread":0.24014483808960166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003006547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729794,0.0013500707,0.00021542129,0.00051163626,0.00019431293,0.00033266388,0.00006415718,0.000020219095,0.000013590557],"genre_scores_gemma":[0.99960566,0.000035796624,0.0000329558,0.000027445336,0.000004933091,0.000007834525,0.00011944944,0.000011689376,0.00015422051],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99869967,0.00062561256,0.00026908587,0.00021200182,0.000030023743,0.00016358458],"domain_scores_gemma":[0.9985681,0.0006743474,0.00029029362,0.00019394013,0.00025282506,0.000020459542],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005458502,0.00016845454,0.00033095776,0.0001471576,0.00016170595,0.0000024257065,0.00006737976,0.00021307703,0.000096679214],"category_scores_gemma":[0.00050077337,0.00010835999,0.000043809472,0.00026268736,0.000045909026,0.000068748246,0.00003022255,0.00021252253,0.0000018377995],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005163978,0.00059039274,0.14971712,0.000028651175,0.00038813674,0.0000013933146,0.00036523386,0.000013646989,0.842213,0.0011483561,0.00034105725,0.000029053212],"study_design_scores_gemma":[0.009921691,0.0008931514,0.9456408,0.00009374686,0.00016243494,0.000034798264,0.0002928435,0.00005107497,0.04049422,0.0000508166,0.0022235955,0.00014081056],"about_ca_topic_score_codex":0.00012278344,"about_ca_topic_score_gemma":0.000048504142,"teacher_disagreement_score":0.8017188,"about_ca_system_score_codex":0.000023897837,"about_ca_system_score_gemma":0.00007330154,"threshold_uncertainty_score":0.4418792},"labels":[],"label_agreement":null},{"id":"W2003146643","doi":"10.1016/j.vaccine.2009.10.079","title":"Economic impact of the introduction of an acellular pertussis vaccine in Canada: A 6-year analysis","year":2009,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Brock University; PharmIdeas (Canada)","funders":"Sanofi Pasteur; Public Health Agency of Canada","keywords":"Medicine; Economic impact analysis; Economic analysis; Bordetella pertussis; Whooping cough; Virology; Vaccination; Economics; Biology","score_opus":0.004552538535742506,"score_gpt":0.21652302669005147,"score_spread":0.21197048815430897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003146643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987328,0.00021773046,0.000004792867,0.0006064008,0.00027097928,0.00010061049,0.00003546421,0.00000649481,0.000024722764],"genre_scores_gemma":[0.9996933,0.000036369853,0.000010619089,0.000010193792,0.00007707348,0.0000012272635,0.00006766441,0.0000048329453,0.00009872926],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992032,0.00010218323,0.0003603035,0.00017085625,0.00001026539,0.00015320802],"domain_scores_gemma":[0.9993527,0.00001862623,0.00018061089,0.0003898794,0.00004423587,0.000013935652],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012923025,0.00011073305,0.00038637844,0.00020736281,0.000038802267,0.0000029703897,0.0001460704,0.00007508147,0.0017194727],"category_scores_gemma":[0.000023652956,0.00007178376,0.0001568371,0.00045090215,0.000003820122,0.000077409764,0.000022957594,0.00010619916,0.00000429701],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033242285,0.00012067872,0.49105144,0.0000043137356,0.00058348896,2.3091518e-7,0.00006824651,0.0039609396,0.50009537,0.00008969891,0.0018860423,0.001807169],"study_design_scores_gemma":[0.0009335159,0.00022011544,0.9418204,0.0000034732602,0.0001852251,0.000008137035,0.00004831969,0.0001267408,0.055909187,0.000022434466,0.00064999744,0.000072482595],"about_ca_topic_score_codex":0.70920354,"about_ca_topic_score_gemma":0.7449249,"teacher_disagreement_score":0.45076895,"about_ca_system_score_codex":0.0002954211,"about_ca_system_score_gemma":0.00029610767,"threshold_uncertainty_score":0.9991931},"labels":[],"label_agreement":null},{"id":"W2003189910","doi":"10.1016/s0732-8893(00)00117-6","title":"Detection of Bordetella pertussis in a clinical laboratory by culture, polymerase chain reaction, and direct fluorescent antibody staining; accuracy, and cost","year":2000,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Health; University of Saskatchewan","funders":"Abbott Laboratories","keywords":"Bordetella pertussis; Polymerase chain reaction; Staining; Antibody; Microbiology; Direct fluorescent antibody; Virology; Whooping cough; Bordetella; Fluorescein; Real-time polymerase chain reaction; Biology; Fluorescence; Bacteria; Immunology; Gene; Vaccination; Genetics","score_opus":0.0054528680304706065,"score_gpt":0.26294231441788446,"score_spread":0.25748944638741383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003189910","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826679,0.015796982,0.000008022352,0.0000893202,0.0003804022,0.00043541,0.00048177876,0.000052326977,0.00008781012],"genre_scores_gemma":[0.9775451,0.0217371,0.0000021805972,0.00019652472,0.00004674441,0.000050218667,0.0003178458,0.000015607382,0.00008868786],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981651,0.00053885806,0.0005101454,0.00047889113,0.000009457692,0.0002975942],"domain_scores_gemma":[0.9985541,0.00093310676,0.00015592774,0.00018029267,0.00007494876,0.000101620884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003193775,0.00025146955,0.0004447198,0.00013966378,0.00023329146,0.000021370673,0.000049532056,0.00035457985,0.00017186375],"category_scores_gemma":[0.001109747,0.00021979584,0.00005808089,0.00018041751,0.00048687973,0.00012708979,0.000049086513,0.00030053343,0.00001147684],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000518864,0.0005536826,0.29625973,0.000049615024,0.00011843936,0.0000055395835,0.00017546162,5.2164864e-7,0.6713405,0.000026218226,0.0008853834,0.030066049],"study_design_scores_gemma":[0.007490983,0.0014634605,0.79963005,0.0002265855,0.00037617763,0.0002480845,0.00020872166,0.000015127113,0.061136454,0.00007355286,0.12833782,0.00079300214],"about_ca_topic_score_codex":0.0005329423,"about_ca_topic_score_gemma":0.00017913064,"teacher_disagreement_score":0.61020404,"about_ca_system_score_codex":0.00002227404,"about_ca_system_score_gemma":0.000056505283,"threshold_uncertainty_score":0.8963014},"labels":[],"label_agreement":null},{"id":"W2003589263","doi":"10.1097/00006123-200102000-00012","title":"Prodromal Signs and Clinical Factors Influencing Outcome in Patients with Intraventricular Rupture of Purulent Brain Abscess","year":2001,"lang":"en","type":"article","venue":"Neurosurgery","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Sept Iles","funders":"","keywords":"Medicine; Headaches; Abscess; Brain abscess; Irritation; Anesthesia; Surgery; Ventricle; Radiology; Internal medicine","score_opus":0.01943393226639235,"score_gpt":0.2619494161391546,"score_spread":0.24251548387276228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003589263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99897736,0.000053402444,0.000004202202,0.00007673426,0.0006548088,0.00018547502,0.000011863976,0.000021130427,0.000014991805],"genre_scores_gemma":[0.99978805,0.00001774507,0.0000032116072,0.00008286372,0.000019150166,0.0000038102714,0.000026304366,0.00001082357,0.00004805784],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892837,0.00015207854,0.00047187792,0.0002245883,0.000020623846,0.00020245014],"domain_scores_gemma":[0.9994031,0.00022402804,0.00015876326,0.00014383509,0.000047609567,0.000022646187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017027307,0.0001303943,0.00032937783,0.00012887073,0.00004650693,0.00001097282,0.00005611549,0.00016356993,0.00007676154],"category_scores_gemma":[0.00014048807,0.00009292208,0.000058730802,0.00017690155,0.00007461581,0.000095641866,0.000041728268,0.00023965797,0.0000045272955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016938435,0.00028747335,0.9884317,0.0000120774785,0.000027874876,0.0000054828697,0.000043704822,0.000005038158,0.010012947,0.000007343373,0.000088930545,0.0009080344],"study_design_scores_gemma":[0.0010242116,0.0002940056,0.99546456,0.000022837454,0.000015964246,0.0000119792785,0.000018565728,4.551113e-7,0.001427064,0.0000033833235,0.0016130174,0.00010392888],"about_ca_topic_score_codex":0.0000931152,"about_ca_topic_score_gemma":0.000022889144,"teacher_disagreement_score":0.008585883,"about_ca_system_score_codex":0.00001008991,"about_ca_system_score_gemma":0.000018556955,"threshold_uncertainty_score":0.37892523},"labels":[],"label_agreement":null},{"id":"W2003699581","doi":"10.1016/j.inhe.2010.09.009","title":"Vaccine prevention of meningococcal disease in adolescents and travellers","year":2010,"lang":"en","type":"article","venue":"International Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Medicine; Virology; Vaccination; Neisseria meningitidis; Pediatrics; Immunology; Immunization; Antibody; Biology","score_opus":0.012372883370522786,"score_gpt":0.30632782719497775,"score_spread":0.293954943824455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003699581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761564,0.00011000333,0.000036258483,0.00097470405,0.0010739435,0.000100784535,0.000015376558,0.000007884531,0.00006539273],"genre_scores_gemma":[0.9995986,0.000050957937,0.00002918057,0.00003702816,0.000035354195,0.000005692408,0.00003601557,0.0000031228226,0.00020405254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996108,0.00003097283,0.00017958065,0.00009168731,0.000009272937,0.00007771642],"domain_scores_gemma":[0.9998226,0.000009221737,0.00006939713,0.00005080664,0.000028058701,0.000019872583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011386397,0.00004397371,0.00008254813,0.000087385255,0.000025282105,0.000003207551,0.00004787806,0.000040579107,0.00021405991],"category_scores_gemma":[0.000021961894,0.00004027439,0.000019201065,0.000032981792,0.000014486457,0.000044707325,0.000020258716,0.000115291616,0.00000840807],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039692572,0.00039810943,0.8022299,0.00004682429,0.000027937042,3.4896476e-7,0.00020299698,0.0000026787063,0.16378397,0.002499861,0.00028258833,0.030127857],"study_design_scores_gemma":[0.0010876032,0.000065931206,0.99358386,0.00007203161,0.000002160314,0.0000060405227,0.000016564398,0.000030859977,0.0013062604,0.00027025695,0.0035211055,0.000037323895],"about_ca_topic_score_codex":0.00041709302,"about_ca_topic_score_gemma":0.00074647006,"teacher_disagreement_score":0.19135395,"about_ca_system_score_codex":0.00001264217,"about_ca_system_score_gemma":0.000042276515,"threshold_uncertainty_score":0.23438059},"labels":[],"label_agreement":null},{"id":"W2003788803","doi":"10.3345/kjp.2011.54.4.141","title":"Recommendation for the use of newly introduced Tdap vaccine in Korea","year":2011,"lang":"en","type":"article","venue":"Korean Journal of Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Pertussis vaccine; Incidence (geometry); Whooping cough; Pediatrics; Food and drug administration; Bordetella pertussis; Vaccination; Immunology; Immunization; Environmental health; Antibody","score_opus":0.07044781823113548,"score_gpt":0.26266379029375947,"score_spread":0.19221597206262397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003788803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99340314,0.00031331994,0.002918289,0.000751878,0.0023650127,0.00016872451,0.000026569187,0.0000055942255,0.00004747765],"genre_scores_gemma":[0.9974079,0.0007894425,0.0011983397,0.00003249575,0.00045612286,0.0000031438121,0.000020654252,0.000010681467,0.00008122435],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99919116,0.00008602331,0.00051347306,0.000071333605,0.0000110897245,0.00012690568],"domain_scores_gemma":[0.9987766,0.00036193238,0.00047144986,0.00011614997,0.0002607621,0.000013094106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041090816,0.00008048261,0.00020957952,0.00021509275,0.000053458734,0.000008166524,0.00012532684,0.000093672534,0.00038466105],"category_scores_gemma":[0.00038795485,0.000051398092,0.00009577034,0.00019695102,0.000015887648,0.00017679276,0.000024227978,0.00018364606,0.000004310539],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006852803,0.0019069498,0.39473194,0.00015143813,0.000545527,0.0000057608354,0.004599895,0.0001608673,0.19371215,0.0032076305,0.1620318,0.23209324],"study_design_scores_gemma":[0.020174593,0.0054332614,0.62111974,0.00006273462,0.0014867006,0.0008727799,0.001195851,0.000082129096,0.084634624,0.002580101,0.26164007,0.0007173958],"about_ca_topic_score_codex":0.00012683812,"about_ca_topic_score_gemma":0.00007904915,"teacher_disagreement_score":0.23137584,"about_ca_system_score_codex":0.00001857212,"about_ca_system_score_gemma":0.000046646386,"threshold_uncertainty_score":0.42117688},"labels":[],"label_agreement":null},{"id":"W2004112267","doi":"10.1016/j.vaccine.2011.12.093","title":"Considerations for controlling invasive meningococcal disease in high income countries","year":2012,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"Norwegian Institute of Public Health; Institut pour la Recherche en Santé Publique; Michael Smith Health Research BC","keywords":"Reactogenicity; Neisseria meningitidis; Meningococcal disease; Meningococcal vaccine; Context (archaeology); Medicine; Epidemiology; Virology; Environmental health; Public health; Immunization; Immunology; Biology; Antigen","score_opus":0.036710205580346836,"score_gpt":0.2997165180397572,"score_spread":0.26300631245941036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004112267","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001490333,0.99404347,0.00003910412,0.00017611742,0.0018640826,0.0016240255,0.00068669306,0.000063590356,0.00001258206],"genre_scores_gemma":[0.016300933,0.98114806,0.00006594449,0.00004359209,0.00043203033,0.0006450467,0.0009184549,0.00004879039,0.0003971378],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983137,0.00021131142,0.0007372862,0.00031720518,0.000010803643,0.00040967998],"domain_scores_gemma":[0.99756896,0.001673215,0.00030806032,0.00028739334,0.000114173105,0.000048212692],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025798418,0.00037658223,0.001504376,0.00030983012,0.00023649193,0.000042214328,0.00011021069,0.0004181561,0.001182431],"category_scores_gemma":[0.00039341676,0.00029401862,0.0002725962,0.00014055661,0.000016805063,0.00013286178,0.00006745816,0.0003036323,0.0002589304],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047326363,0.0039045792,0.04334735,0.1385879,0.015627015,0.0000886949,0.0013788674,0.000095679716,0.0025135651,0.2660659,0.034734543,0.48892325],"study_design_scores_gemma":[0.0021183575,0.00006446846,0.00041048994,0.0021235745,0.0011230024,0.000029960382,0.0000035764708,3.8691755e-7,0.000021696575,0.0003723671,0.9934064,0.00032568123],"about_ca_topic_score_codex":0.00015201641,"about_ca_topic_score_gemma":0.00028240387,"teacher_disagreement_score":0.95867187,"about_ca_system_score_codex":0.00008806528,"about_ca_system_score_gemma":0.00030411096,"threshold_uncertainty_score":0.9999512},"labels":[],"label_agreement":null},{"id":"W2004239384","doi":"10.1016/j.vaccine.2008.11.115","title":"Safety and immunogenicity of a hexavalent diphtheria–tetanus–acellular pertussis–inactivated poliovirus–Haemophilus influenzae b conjugate–hepatitis B vaccine at 2, 3, 4, and 12–14 months of age","year":2009,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Centre Hospitalier Universitaire Sainte-Justine; University of Manitoba; Izaak Walton Killam Health Centre; Dalhousie University; Nova Scotia Health Authority","funders":"","keywords":"Diphtheria; Medicine; Tetanus; Immunogenicity; Hepatitis B; Toxoid; Hib vaccine; Poliovirus; Hepatitis A vaccine; HBsAg; Virology; Conjugate vaccine; Immunology; Hepatitis B virus; Vaccination; Antigen; Virus","score_opus":0.009690913604197686,"score_gpt":0.2247400785991311,"score_spread":0.2150491649949334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004239384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880655,0.010297583,0.000022215087,0.00040861618,0.00028730812,0.00045174704,0.00017713071,0.00005904237,0.00023087804],"genre_scores_gemma":[0.99396175,0.0050729136,0.000045372613,0.0000896377,0.000044957575,0.000005059917,0.00010901432,0.000025614041,0.00064569025],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981522,0.00019663514,0.0008335233,0.00041025292,0.000037266225,0.0003701406],"domain_scores_gemma":[0.9987852,0.00012158707,0.0004157122,0.00046542918,0.00015115135,0.0000609013],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024550827,0.00036032448,0.00092991465,0.00021021221,0.00022222703,0.000013972198,0.0001531853,0.00032992742,0.0007115535],"category_scores_gemma":[0.000099376986,0.0003004024,0.00013058595,0.00023453217,0.000052891643,0.00015890566,0.00018207487,0.00021240798,0.00001245348],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029911762,0.00026448775,0.043147266,0.000054758984,0.00038887715,0.0000066166667,0.00028892563,0.0000054767665,0.9492337,0.00019140671,0.0002683058,0.0031589642],"study_design_scores_gemma":[0.0062916856,0.0010763796,0.6089603,0.00008833396,0.00018519774,0.00017874726,0.000036204325,0.000010448448,0.37118652,0.00010674942,0.01159496,0.00028448246],"about_ca_topic_score_codex":0.003276204,"about_ca_topic_score_gemma":0.00038557485,"teacher_disagreement_score":0.5780472,"about_ca_system_score_codex":0.000061186765,"about_ca_system_score_gemma":0.000029885518,"threshold_uncertainty_score":0.9999448},"labels":[],"label_agreement":null},{"id":"W2004264368","doi":"10.1074/jbc.m602314200","title":"Identification of a Bifunctional Lipopolysaccharide Sialyltransferase in Haemophilus influenzae","year":2006,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Sialyltransferase; Haemophilus influenzae; Lipopolysaccharide; Sialic acid; Escherichia coli; Lactose; Strain (injury); Chemistry; Microbiology; Biochemistry; Mutant; Biology; Molecular biology; Gene","score_opus":0.015547619832682418,"score_gpt":0.24369340534374395,"score_spread":0.22814578551106154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004264368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987184,0.0005431865,0.00012011537,0.00012625841,0.0003114608,0.000034688223,0.00001738972,0.000007692146,0.00012080429],"genre_scores_gemma":[0.99961895,0.00004654452,0.000019684963,0.000013092583,0.00018371381,0.0000022323502,0.000018810622,0.0000032634239,0.00009369909],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998978,0.000049657167,0.00073584693,0.00009975433,0.000018887251,0.00011784886],"domain_scores_gemma":[0.9993633,0.000091068796,0.0003189299,0.00008139103,0.00013253868,0.000012749363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028764358,0.00009027336,0.000252561,0.00006240464,0.000035865574,0.000007059502,0.00011222303,0.0002460992,0.0005438225],"category_scores_gemma":[0.00013230034,0.00006485153,0.00012962073,0.00010541249,0.0000996981,0.000062831015,0.000015363314,0.00023267786,0.000009008178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023450417,0.00024901802,0.02325377,0.000012270406,0.000028006818,0.00000246402,0.000007378335,0.0000381902,0.97562945,0.000105011335,0.00016847886,0.0002714807],"study_design_scores_gemma":[0.0008222711,0.0000863346,0.06378778,0.000020178964,0.000014981211,0.00020914795,0.000021845464,0.0000012131704,0.93317646,0.0007964539,0.0009950978,0.00006826549],"about_ca_topic_score_codex":0.00006056803,"about_ca_topic_score_gemma":0.0000041825933,"teacher_disagreement_score":0.042452995,"about_ca_system_score_codex":0.00003057039,"about_ca_system_score_gemma":0.000039491606,"threshold_uncertainty_score":0.5954475},"labels":[],"label_agreement":null},{"id":"W2005054657","doi":"10.1097/inf.0000000000000577","title":"Predictors of Disease Severity in Children Hospitalized for Pertussis During an Epidemic","year":2014,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"GlaxoSmithKline","keywords":"Medicine; Interquartile range; Pediatrics; Odds ratio; Logistic regression; Observational study; Prospective cohort study; Disease; Internal medicine","score_opus":0.004849010419044456,"score_gpt":0.22432751489020994,"score_spread":0.2194785044711655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005054657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974919,0.0005078167,0.00015441103,0.0001262202,0.0011337766,0.00040910242,0.00010472768,0.000052965934,0.000019089728],"genre_scores_gemma":[0.99831074,0.00047029334,0.000006892752,0.00003221489,0.0010292043,0.000047728856,0.00003214182,0.000021659134,0.000049102913],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99851674,0.0004528018,0.00046223876,0.00019720307,0.000031073814,0.0003399573],"domain_scores_gemma":[0.9990008,0.00017419373,0.00030333345,0.00027444042,0.000108712935,0.00013851564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059666863,0.0001834845,0.00028740763,0.00023255397,0.00045672522,0.000029295385,0.00020179739,0.00009661808,0.00016299382],"category_scores_gemma":[0.00061602966,0.00012725033,0.00024049604,0.00020575138,0.00006824615,0.00020891962,0.000050797364,0.00029659423,0.000010394168],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005799688,0.00034837195,0.9974811,0.00003108026,0.000098588695,2.9021479e-7,0.00008395508,0.00013931569,0.0007306205,0.000048594444,0.00024264966,0.00021543016],"study_design_scores_gemma":[0.0025404042,0.00017120212,0.99540436,0.000010310359,0.00041843494,0.000070549904,0.000009674374,0.000038780603,0.00004787526,0.0010220559,0.000107104504,0.00015925441],"about_ca_topic_score_codex":0.00010667786,"about_ca_topic_score_gemma":0.000011510754,"teacher_disagreement_score":0.002076781,"about_ca_system_score_codex":0.00005730822,"about_ca_system_score_gemma":0.00012452838,"threshold_uncertainty_score":0.5189118},"labels":[],"label_agreement":null},{"id":"W2005279725","doi":"10.1016/j.jval.2012.08.1106","title":"PIN39 A Cost Consequence Analysis of a Quadrivalent Meningococcal Vaccine (MenACWY-TT) in Canada","year":2012,"lang":"en","type":"article","venue":"Value in Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Neisseria meningitidis; Medicine; Booster (rocketry); Vaccination; Booster dose; Meningococcal disease; Meningococcal vaccine; Incidence (geometry); Cost effectiveness; Pediatrics; Immunization; Immunology; Immune system","score_opus":0.035238139365360764,"score_gpt":0.28721243780360745,"score_spread":0.2519742984382467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005279725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962488,0.0021494832,0.000026069429,0.00060198316,0.000576713,0.00027836155,0.000060201004,0.00000936541,0.00004903555],"genre_scores_gemma":[0.9994362,0.00023401632,0.000042226624,0.00014273581,0.000018592433,0.00003321672,0.000049368693,0.0000063633724,0.00003727607],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832034,0.00041556868,0.00061665307,0.00016475224,0.000019802721,0.00046290987],"domain_scores_gemma":[0.99930507,0.0002090599,0.00019639266,0.000209717,0.000031423908,0.000048360827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062591274,0.00011501354,0.00050537585,0.00036780705,0.00004760584,0.0000025576846,0.000098337056,0.00007886448,0.0004208852],"category_scores_gemma":[0.00006961535,0.00010494298,0.000052137133,0.00085481105,0.000020898342,0.000059500686,0.000036058813,0.0001957697,0.0000087432245],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010647673,0.00023104675,0.97138816,0.00006971255,0.00024073,0.0000021252972,0.00073318667,0.0018266059,0.02256444,0.0009348529,0.00049458275,0.0014081027],"study_design_scores_gemma":[0.0013471415,0.00012133894,0.98516625,0.00010312219,0.00007256653,0.000035639026,0.00037692836,0.00037988598,0.0029580467,0.000021838376,0.009247314,0.00016990949],"about_ca_topic_score_codex":0.9851198,"about_ca_topic_score_gemma":0.90162057,"teacher_disagreement_score":0.083499245,"about_ca_system_score_codex":0.0006465863,"about_ca_system_score_gemma":0.0009875735,"threshold_uncertainty_score":0.46083975},"labels":[],"label_agreement":null},{"id":"W2005788914","doi":"10.1097/inf.0b013e3181bd4e1f","title":"What is the Significance of a High Cycle Threshold Positive IS481 PCR for Bordetella pertussis?","year":2009,"lang":"en","type":"letter","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bordetella pertussis; Coinfection; Gold standard (test); Polymerase chain reaction; Medicine; Vaccination; Biology; Immunology; Gene; Genetics; Internal medicine; Bacteria","score_opus":0.008594422351993437,"score_gpt":0.23608122392200018,"score_spread":0.22748680157000675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005788914","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52410126,0.02038394,0.00021640805,0.43848723,0.013281421,0.0022126196,0.00097896,0.00010217416,0.00023595737],"genre_scores_gemma":[0.8000689,0.018326089,0.000009667158,0.15721394,0.020629417,0.0002281918,0.00022220616,0.00011969302,0.0031818582],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99777913,0.00044862687,0.00068749,0.00036958358,0.00008556971,0.0006296239],"domain_scores_gemma":[0.9969864,0.00094740075,0.0009340601,0.00059561763,0.00048067668,0.000055844594],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048324655,0.00047675223,0.00060449657,0.0002467615,0.0012513523,0.00027998487,0.00056946644,0.0006237266,0.00066917983],"category_scores_gemma":[0.00012490843,0.0002644977,0.00078670436,0.00031170013,0.00019584199,0.00025795485,0.000081361024,0.0021002656,0.00007465282],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004400808,0.0002467058,0.0019489401,0.000098766046,0.0007201599,0.000015294336,0.00035099397,0.000054005875,0.00040706687,0.00006833931,0.9934992,0.0021504087],"study_design_scores_gemma":[0.00796455,0.002764552,0.03408408,0.00037901435,0.013067134,0.0024823379,0.00044262965,0.00003628764,0.0012633712,0.039584707,0.8955798,0.0023515173],"about_ca_topic_score_codex":0.00013380848,"about_ca_topic_score_gemma":0.000010745881,"teacher_disagreement_score":0.2812733,"about_ca_system_score_codex":0.00010494407,"about_ca_system_score_gemma":0.00039287718,"threshold_uncertainty_score":0.99998075},"labels":[],"label_agreement":null},{"id":"W2005920738","doi":"10.4028/www.scientific.net/amr.810.77","title":"Advances in Molecular Technologies and Platforms for the Diagnosis of Infectious Diseases","year":2013,"lang":"en","type":"article","venue":"Advanced materials research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Diagnostic test; Infectious disease (medical specialty); Molecular diagnostics; Nucleic acid; Polymerase chain reaction; Pathogen; Biology; Nucleic Acid Amplification Tests; Nucleic acid detection; NASBA; Infectious agent; Computational biology; Disease; Biotechnology; Medicine; Virology; Microbiology; Bioinformatics; Pathology; Genetics; DNA; Nucleic acid sequence; Veterinary medicine","score_opus":0.02054164727147219,"score_gpt":0.33174246295810905,"score_spread":0.3112008156866369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005920738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875323,0.010815557,0.00007534313,0.00024193559,0.00028104061,0.0009112837,0.00005087642,0.00004955041,0.000042093165],"genre_scores_gemma":[0.9868758,0.010862527,0.00005367542,0.00000516824,0.000009535144,0.0021312914,0.000014320527,0.000009885061,0.000037811245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992724,0.000049765975,0.00020506817,0.00017038737,0.000019511574,0.00028287258],"domain_scores_gemma":[0.9989254,0.000674031,0.00005261747,0.00019689136,0.00014330045,0.000007778524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022550477,0.000088718545,0.00020371124,0.00015530198,0.00015049103,0.000028858727,0.00014164948,0.000102528255,0.00016917616],"category_scores_gemma":[0.0005160399,0.000054467797,0.000023148612,0.00017943255,0.00028724974,0.00027233278,0.0001367681,0.000094395145,0.000016209815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008227941,0.00005653691,0.0048115943,0.000070852795,0.000017340584,1.8031865e-7,0.00002873972,0.00000984418,0.9201323,0.0033242097,0.00007075477,0.071395375],"study_design_scores_gemma":[0.0008850699,0.00027484918,0.00730303,0.000047399433,0.000007061935,0.0000049178298,0.0005566624,8.560433e-7,0.9605138,0.023252651,0.007070977,0.000082733066],"about_ca_topic_score_codex":0.00021649599,"about_ca_topic_score_gemma":0.0000584346,"teacher_disagreement_score":0.07131264,"about_ca_system_score_codex":0.000015038572,"about_ca_system_score_gemma":0.000014308679,"threshold_uncertainty_score":0.22211322},"labels":[],"label_agreement":null},{"id":"W2006239694","doi":"10.1016/j.clinmicnews.2015.03.004","title":"Bordetella Species Other than Bordetella pertussis","year":2015,"lang":"en","type":"article","venue":"Clinical Microbiology Newsletter","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Bordetella pertussis; Bordetella; Microbiology; Medicine; Disease; Whooping cough; Biology; Immunology; Bacteria; Pathology; Vaccination","score_opus":0.07470239503920939,"score_gpt":0.32424485351545856,"score_spread":0.24954245847624917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006239694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97456396,0.0011113095,0.00011680267,0.008242118,0.008067532,0.00027663363,0.00010573147,0.00020440934,0.0073115206],"genre_scores_gemma":[0.94937646,0.00014090975,0.00030294436,0.013501146,0.0017544933,0.000031508112,0.0002618948,0.00007610041,0.034554545],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969666,0.0007543303,0.00090896967,0.00069467456,0.000010389358,0.00066504447],"domain_scores_gemma":[0.99836737,0.0004789981,0.00023218934,0.00065745873,0.00016573907,0.00009825701],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007317082,0.0003706817,0.00072382827,0.0001242958,0.00017131465,0.000038593153,0.00042240808,0.0009839858,0.004372108],"category_scores_gemma":[0.00037840652,0.00027978403,0.00037588194,0.00016781512,0.00075439306,0.00008944119,0.00024204366,0.0006912872,0.00831399],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025702087,0.00025390316,0.06145667,0.000004335118,0.00026114064,0.000003191101,0.000092104965,6.4501984e-7,0.5198469,0.0001588586,0.41499522,0.0026699896],"study_design_scores_gemma":[0.0020921265,0.00045806874,0.010054399,0.0000151365975,0.000067457324,0.00019649809,0.000070101785,5.099417e-7,0.01643148,0.00011545739,0.970127,0.00037177198],"about_ca_topic_score_codex":0.00012508153,"about_ca_topic_score_gemma":0.00010945931,"teacher_disagreement_score":0.55513173,"about_ca_system_score_codex":0.000038623406,"about_ca_system_score_gemma":0.00008496838,"threshold_uncertainty_score":0.9999654},"labels":[],"label_agreement":null},{"id":"W2007476023","doi":"10.1586/14760584.2015.1004317","title":"Outbreaks of meningococcal B infection and the 4CMenB vaccine: historical and future perspectives","year":2015,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Outbreak; Meningococcal disease; Meningococcal vaccine; Neisseria meningitidis; Virology; Epidemiology; Neisseriaceae; Biology; Disease; Medicine; Microbiology; Genetics; Bacteria; Antibiotics","score_opus":0.02145687304332329,"score_gpt":0.3283172907699544,"score_spread":0.30686041772663114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007476023","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000081680686,0.99658793,0.0000046217715,0.0006935438,0.001404833,0.0009872455,0.000017656095,0.000029914041,0.00019258785],"genre_scores_gemma":[0.000027041522,0.9986342,0.000037677615,0.000029215844,0.00071283575,0.0001672941,0.0000415344,0.00003155509,0.00031861998],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976653,0.00067093736,0.0010466595,0.00039378277,0.00003387235,0.00018945182],"domain_scores_gemma":[0.9980905,0.00025447746,0.0008588459,0.00043488346,0.0003264908,0.000034771485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007576697,0.00046289145,0.0031259968,0.00016219346,0.00011443847,0.000011248831,0.00017527539,0.0004184424,0.000218347],"category_scores_gemma":[0.00021682585,0.00024251417,0.00045225077,0.0002906999,0.00008412946,0.0000964745,0.00018484629,0.0003651844,0.0000072370567],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008500576,0.0001352007,0.000035090095,0.035753407,0.0006868788,3.319135e-7,0.00056331884,3.7116172e-9,0.000129518,0.002162737,0.03902008,0.92142844],"study_design_scores_gemma":[0.0009946243,0.00015212432,0.00003905451,0.0127265025,0.0008530039,0.00025282838,0.000072432136,5.2259878e-8,0.0000148619765,0.000014792189,0.9846553,0.00022439257],"about_ca_topic_score_codex":0.00047403315,"about_ca_topic_score_gemma":0.000013964719,"teacher_disagreement_score":0.94563526,"about_ca_system_score_codex":0.000104113155,"about_ca_system_score_gemma":0.0001128654,"threshold_uncertainty_score":0.9889441},"labels":[],"label_agreement":null},{"id":"W2007521909","doi":"10.1097/inf.0b013e318242462a","title":"Safety and Immunogenicity of 2 Mixed Primary Infant Immunization Schedules of Pentavalent Diphtheria, Tetanus, Acellular Pertussis, Inactivated Poliomyelitis, and Haemophilus influenzae Type b Vaccines at 2, 4, and 6 Months of Age","year":2011,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; Dalhousie University; Izaak Walton Killam Health Centre; Capital District Health Authority","funders":"","keywords":"Medicine; Pertactin; Diphtheria; Filamentous haemagglutinin adhesin; Vaccination; Immunogenicity; Immunization; Tetanus; Adverse effect; Haemophilus influenzae; Pediatrics; Immunology; Antigen; Pertussis toxin; Internal medicine; Microbiology; Antibiotics; Biology","score_opus":0.01056098460796355,"score_gpt":0.21211092201228682,"score_spread":0.20154993740432325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007521909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97354853,0.025585804,0.000022597691,0.000021750076,0.00041963672,0.00025658027,0.0000793003,0.000015653974,0.0000501555],"genre_scores_gemma":[0.97734547,0.022484649,0.000024028603,0.0000073263454,0.00006914664,0.0000031137397,0.000024426745,0.000017188006,0.000024624456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99865294,0.00033313976,0.000625007,0.00015524935,0.00004151661,0.00019214967],"domain_scores_gemma":[0.9986802,0.00012968299,0.00064374664,0.00022916253,0.00025543824,0.00006181383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034287863,0.00020109782,0.00043676366,0.00023577877,0.0003693534,0.00001337787,0.0001082605,0.00013373164,0.00015491905],"category_scores_gemma":[0.0001688632,0.00014191416,0.00008599872,0.00026126104,0.00022017298,0.00016335375,0.0002312636,0.00020875724,0.000001134323],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022330584,0.0002557491,0.7898143,0.00016759761,0.00035767525,0.0000027439553,0.0005683623,0.000005694671,0.20573436,0.00012817285,0.000018594932,0.00071368867],"study_design_scores_gemma":[0.002152088,0.00035216036,0.98448586,0.000039392136,0.0006478794,0.0003682951,0.00010430681,0.0000034490047,0.011287841,0.00028589007,0.00012203608,0.0001508056],"about_ca_topic_score_codex":0.000984226,"about_ca_topic_score_gemma":0.000038983188,"teacher_disagreement_score":0.19467156,"about_ca_system_score_codex":0.000042906337,"about_ca_system_score_gemma":0.00008739868,"threshold_uncertainty_score":0.5787091},"labels":[],"label_agreement":null},{"id":"W2007654956","doi":"10.1016/s0378-1119(99)00557-0","title":"Stable shuttle vectors for Neisseria gonorrhoeae, Haemophilus spp. and other bacteria based on a single origin of replication","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Neisseria gonorrhoeae; Haemophilus ducreyi; Shuttle vector; Biology; Haemophilus influenzae; Plasmid; Microbiology; Escherichia coli; Haemophilus; Vector (molecular biology); Bacteria; Virology; Gene; Genetics; Recombinant DNA; Pasteurellaceae; Antibiotics","score_opus":0.024825596960317612,"score_gpt":0.2579227490692132,"score_spread":0.2330971521088956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007654956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983028,0.00015119804,0.00010182351,0.00010179011,0.0003216646,0.00022919883,0.0001336826,0.000031709616,0.0006261384],"genre_scores_gemma":[0.9974457,0.000013587191,0.00037199195,0.00008950053,0.00006247892,0.000038819766,0.00012338761,0.000016438471,0.0018380992],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945945,0.000033251254,0.00015576616,0.00021071068,0.0000033667052,0.00013748545],"domain_scores_gemma":[0.9995721,0.0000411347,0.000059169237,0.0002874487,0.000027884229,0.000012239701],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009359756,0.0000914228,0.00015253654,0.000045549164,0.000078441015,0.000010952844,0.000048966725,0.00010214575,0.0030871884],"category_scores_gemma":[0.000015710517,0.00008112434,0.000036800968,0.000063741456,0.000029147339,0.000036022426,0.000006621922,0.000035366178,0.00007242244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038221842,0.00012042753,0.0011672726,0.00001212681,0.00002460031,1.5184414e-8,0.00002439809,0.000017694672,0.9908068,0.00009033312,0.0008861753,0.0064678923],"study_design_scores_gemma":[0.0009911092,0.00043000001,0.010425067,0.0000128561405,0.000022948443,0.000007300621,0.0000052653527,0.000033355584,0.5917853,0.00006284917,0.39612308,0.00010083326],"about_ca_topic_score_codex":0.00020243021,"about_ca_topic_score_gemma":0.000029243609,"teacher_disagreement_score":0.3990215,"about_ca_system_score_codex":0.000016166117,"about_ca_system_score_gemma":0.00002013089,"threshold_uncertainty_score":0.99782413},"labels":[],"label_agreement":null},{"id":"W2007743882","doi":"10.1001/jama.2007.29-c","title":"Immunogenicity of a Tetravalent Meningococcal Glycoconjugate Vaccine in Infants","year":2008,"lang":"en","type":"article","venue":"JAMA","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Reactogenicity; Neisseria meningitidis; Immunogenicity; Meningococcal vaccine; Meningococcal disease; Immunization; Pediatrics; Conjugate vaccine; Vaccination; Immunology; Antibody","score_opus":0.014963128714315507,"score_gpt":0.24322315718966267,"score_spread":0.22826002847534715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007743882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99770904,0.0007676274,0.000008989552,0.00012661428,0.00048119214,0.00014292583,0.00001817414,0.000028895007,0.0007165266],"genre_scores_gemma":[0.99919,0.00020548342,0.000032618525,0.00003021316,0.00004203966,0.000014595311,0.000021088088,0.0000077240275,0.0004562557],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99923176,0.00008024161,0.00032885917,0.00014860433,0.000010392329,0.00020015388],"domain_scores_gemma":[0.99959576,0.00005426466,0.00008954231,0.00019091334,0.000058274596,0.000011247255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013037305,0.00010478506,0.00025432135,0.0001193632,0.00007028967,0.0000037061045,0.0001082961,0.00017478885,0.00079258444],"category_scores_gemma":[0.00007190559,0.000090054455,0.00006702346,0.00016960222,0.000043494812,0.000094948395,0.00006027084,0.0001874863,0.000115124],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000490319,0.00018351333,0.09953394,0.000008457002,0.000064900836,0.0000033904364,0.00033094824,0.0000028844013,0.8947866,0.00012843873,0.0010303549,0.0034362439],"study_design_scores_gemma":[0.004063095,0.0001793438,0.70159984,0.000025844085,0.000010393814,0.00017680264,0.000028856255,0.000002778967,0.27655342,0.000031992102,0.01722088,0.00010673211],"about_ca_topic_score_codex":0.0010302239,"about_ca_topic_score_gemma":0.00011832225,"teacher_disagreement_score":0.6182332,"about_ca_system_score_codex":0.000020145426,"about_ca_system_score_gemma":0.00003177056,"threshold_uncertainty_score":0.8678244},"labels":[],"label_agreement":null},{"id":"W2007885895","doi":"10.1186/1471-2458-7-130","title":"Invasive meningococcal disease epidemiology and control measures: a framework for evaluation","year":2007,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Association of Radiation Oncology; Sanofi (Canada)","funders":"Sanofi Pasteur; Sanofi","keywords":"Medicine; Herd immunity; Vaccination; Epidemiology; Outbreak; Disease; Meningococcal vaccine; Meningococcal disease; Public health; Environmental health; Incidence (geometry); Immunization; Immunology; Neisseria meningitidis; Virology; Internal medicine","score_opus":0.11442094145389636,"score_gpt":0.3881155254086327,"score_spread":0.27369458395473634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007885895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49896002,0.0054142005,0.47987077,0.012502845,0.0013451398,0.0016722251,0.00008669845,0.0000925601,0.000055546207],"genre_scores_gemma":[0.9956488,0.00009213001,0.0017837932,0.0018119543,0.00023030187,0.00022004034,0.00015095869,0.000012607236,0.000049408547],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976413,0.0009419659,0.00048183213,0.00030564543,0.000017851264,0.0006113978],"domain_scores_gemma":[0.9959169,0.003244674,0.00022379757,0.0002013894,0.0002342754,0.0001789342],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.008680073,0.0001304544,0.0003510182,0.00013487975,0.00037031143,0.00001583174,0.000075479424,0.00022956128,0.00013873144],"category_scores_gemma":[0.012075657,0.0001093517,0.00007200407,0.00010944756,0.00009117058,0.00009934212,0.000022748805,0.00017618526,0.000021914435],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002088596,0.000597055,0.53632396,0.00034329295,0.00041749672,4.0654567e-7,0.0012325414,0.000009920592,0.008219829,0.25592905,0.0097135,0.18512434],"study_design_scores_gemma":[0.007624996,0.0007323734,0.76310414,0.00006932184,0.000082843355,0.000035098878,0.00037372945,0.0001025467,0.00013760682,0.026257237,0.20116714,0.00031295317],"about_ca_topic_score_codex":0.00019000577,"about_ca_topic_score_gemma":0.00042627033,"teacher_disagreement_score":0.4966888,"about_ca_system_score_codex":0.00011750423,"about_ca_system_score_gemma":0.0009027119,"threshold_uncertainty_score":0.99624604},"labels":[],"label_agreement":null},{"id":"W2007963415","doi":"10.1586/erv.11.159","title":"Epidemiology and prevention of meningococcal disease: a critical appraisal of vaccine policies","year":2011,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Norwegian Institute of Public Health","keywords":"Meningococcal disease; Meningococcal vaccine; Vaccination; Epidemiology; Medicine; Disease; Immunization; Incidence (geometry); Environmental health; Neisseria meningitidis; Mass vaccination; Vaccination policy; Immunology; Antigen; Biology","score_opus":0.07054566502013376,"score_gpt":0.43442959449295393,"score_spread":0.36388392947282017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007963415","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001263087,0.9977043,0.00006143878,0.00014677316,0.0010575928,0.000690124,0.00011347253,0.000023226215,0.00007676084],"genre_scores_gemma":[0.00013297152,0.99881923,0.0003210892,0.000026494326,0.00016915204,0.0001696907,0.00022435002,0.00003464526,0.00010238933],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958403,0.0011309417,0.0022899145,0.00041125578,0.000019529907,0.00030803544],"domain_scores_gemma":[0.9958943,0.0018939599,0.0013158264,0.00056993915,0.0002677612,0.000058217665],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007936051,0.0004693811,0.0046169637,0.0002497346,0.000051791874,0.0000014277626,0.00029349566,0.00041108008,0.0011883669],"category_scores_gemma":[0.003958959,0.0003192468,0.00084940443,0.0002588411,0.00015559972,0.000088033914,0.00022791985,0.00023508309,0.000012217798],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010956163,0.0004737179,0.00037742656,0.2660739,0.00089829654,4.9643546e-7,0.00009967803,9.083983e-9,0.00060125906,0.012098155,0.010351943,0.70891553],"study_design_scores_gemma":[0.00030135608,0.00032923542,0.000547237,0.088965915,0.0012268949,0.00009635981,0.000010241212,5.985504e-8,0.00009537646,0.00012448468,0.90805817,0.00024468702],"about_ca_topic_score_codex":0.000175258,"about_ca_topic_score_gemma":0.0000054930338,"teacher_disagreement_score":0.8977062,"about_ca_system_score_codex":0.000011373129,"about_ca_system_score_gemma":0.00013698875,"threshold_uncertainty_score":0.999926},"labels":[],"label_agreement":null},{"id":"W2008480422","doi":"10.1016/s0140-6736(05)71121-1","title":"Pertussis vaccination beyond childhood","year":2005,"lang":"en","type":"article","venue":"The Lancet","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec","funders":"","keywords":"Vaccination; Medicine; Pediatrics; Scopus; Pertussis vaccine; Immunity; Immunology; Family medicine; MEDLINE; Political science; Immunization; Immune system","score_opus":0.013669388962525956,"score_gpt":0.2479282896473013,"score_spread":0.23425890068477534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008480422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96778053,0.00094767084,0.00002678229,0.015588211,0.000600225,0.000087764434,0.000016158023,0.00009182415,0.014860831],"genre_scores_gemma":[0.99596375,0.000109194836,0.000039346694,0.00063962577,0.00083272025,0.000010165737,0.00002926915,0.0000052930736,0.0023706402],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996448,0.000052208772,0.00008044279,0.00007822984,0.0000051126244,0.00013919272],"domain_scores_gemma":[0.9997048,0.00003299608,0.00003101725,0.00020824208,0.000018449797,0.000004516133],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011093504,0.000057376314,0.00011820714,0.000020695148,0.00016980481,0.000015450987,0.0001263916,0.000059137474,0.002517583],"category_scores_gemma":[0.00002160254,0.00003381722,0.000031377567,0.000057307785,0.000011843861,0.00006261417,0.000027039989,0.00010653331,0.0010148854],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012275932,0.00028527976,0.008763187,0.0000077880595,0.00022638995,1.7555905e-7,0.001538174,0.000018840246,0.27790135,0.015388007,0.41128066,0.2844674],"study_design_scores_gemma":[0.00085998233,0.000030666957,0.2952865,0.0000028936927,0.000017616556,0.00003067048,0.00002857795,0.0000029224104,0.015242107,0.00036229307,0.6880699,0.00006588381],"about_ca_topic_score_codex":0.000022961141,"about_ca_topic_score_gemma":0.000046125162,"teacher_disagreement_score":0.2865233,"about_ca_system_score_codex":0.00001057159,"about_ca_system_score_gemma":0.000007138478,"threshold_uncertainty_score":0.99976295},"labels":[],"label_agreement":null},{"id":"W2008976573","doi":"10.1007/s10404-007-0195-y","title":"Identification of respiratory pathogen Bordetella Pertussis using integrated microfluidic chip technology","year":2007,"lang":"en","type":"article","venue":"Microfluidics and Nanofluidics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Bordetella pertussis; Microfluidic chip; Pathogen; Chip; Microfluidics; Lab-on-a-chip; Identification (biology); Microbiology; Biology; Nanotechnology; Materials science; Computer science; Bacteria; Genetics","score_opus":0.015960029378283492,"score_gpt":0.25768766702635937,"score_spread":0.24172763764807587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008976573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89506495,0.09934896,0.003975324,0.00007946229,0.0009597819,0.00027803396,0.00013815037,0.00010361446,0.00005171558],"genre_scores_gemma":[0.99133784,0.007999567,0.00012097103,0.00009519497,0.00007493276,0.000007964183,0.000081901686,0.000051540115,0.00023006366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976928,0.00012291048,0.0010931796,0.00050854956,0.000042759522,0.0005397791],"domain_scores_gemma":[0.99857867,0.000105281586,0.00035703418,0.0004896363,0.00041274517,0.000056622823],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011681496,0.00034391394,0.0005138122,0.0008036431,0.0004014944,0.000033643468,0.00026974216,0.0007515687,0.00011365946],"category_scores_gemma":[0.00015914509,0.0003165147,0.00013412553,0.0009310283,0.00048039336,0.0001211497,0.00012099395,0.0003270999,0.00003781762],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011623388,0.00014122801,0.0119967805,0.000037414957,0.00012800799,0.0000036070148,0.00015119351,4.6928992e-8,0.97110486,0.00066220184,0.0017470978,0.013911299],"study_design_scores_gemma":[0.0007608112,0.00017948316,0.0017491854,0.000049779785,0.00010104923,0.0001866352,0.00029196753,0.0000019877875,0.83513343,0.0001057534,0.16116598,0.00027390194],"about_ca_topic_score_codex":0.00011064541,"about_ca_topic_score_gemma":0.0000053131307,"teacher_disagreement_score":0.1594189,"about_ca_system_score_codex":0.00007514121,"about_ca_system_score_gemma":0.00014911455,"threshold_uncertainty_score":0.9999287},"labels":[],"label_agreement":null},{"id":"W2009430127","doi":"10.1016/s1045-1870(03)00036-0","title":"Immunization monitoring program, active: a model of active surveillance of vaccine safety","year":2003,"lang":"en","type":"article","venue":"Seminars in Pediatric Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Impact","funders":"","keywords":"Medicine; Adverse effect; Vaccination; Immunization; Population; Pediatrics; Immunology; Internal medicine; Environmental health; Antibody","score_opus":0.006838393205423262,"score_gpt":0.25125192535679197,"score_spread":0.2444135321513687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009430127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955,0.002358228,0.00011822233,0.0000047804624,0.00070253754,0.00040630784,0.00013543223,0.000077057426,0.0006974126],"genre_scores_gemma":[0.9955409,0.0041211033,0.00006617585,0.0000014792404,0.000051980198,0.00006526541,0.00006858695,0.000019838202,0.00006468274],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880767,0.00021655817,0.00045655298,0.00023299192,0.000029854342,0.00025635914],"domain_scores_gemma":[0.9989722,0.00020225567,0.00032949023,0.0002463993,0.00022650152,0.000023183811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013946336,0.00018750767,0.0003923783,0.0003162609,0.0001022472,0.000005484378,0.00009965802,0.00018207952,0.000083038176],"category_scores_gemma":[0.0003819893,0.00018465146,0.00010894567,0.0007137997,0.00004530044,0.00015824682,0.000045047185,0.00017238919,0.0000044952703],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035879668,0.0011790039,0.9631533,0.00011097855,0.000081613,4.361921e-7,0.00023536391,0.0014988635,0.01897587,0.00025996668,0.00006064928,0.014085136],"study_design_scores_gemma":[0.0039963634,0.0006836104,0.92781633,0.00009774688,0.00023393726,0.00002879073,0.000302326,0.00008413743,0.06527829,0.00070973695,0.00031289255,0.0004558488],"about_ca_topic_score_codex":0.00011669187,"about_ca_topic_score_gemma":0.00002522072,"teacher_disagreement_score":0.046302423,"about_ca_system_score_codex":0.0000820684,"about_ca_system_score_gemma":0.00013179221,"threshold_uncertainty_score":0.75298685},"labels":[],"label_agreement":null},{"id":"W2010303963","doi":"10.1016/j.vaccine.2006.12.047","title":"Comparison of the safety and immunogenicity of concomitant and sequential administration of an adult formulation tetanus and diphtheria toxoids adsorbed combined with acellular pertussis (Tdap) vaccine and trivalent inactivated influenza vaccine in adults","year":2007,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); McGill University Health Centre; Izaak Walton Killam Health Centre; Montreal Children's Hospital; Saint John Regional Hospital; Health Sciences Centre; Dalhousie University","funders":"","keywords":"Diphtheria; Immunogenicity; Tetanus; Medicine; Whooping cough; Virology; Vaccination; Immunology; Antigen","score_opus":0.012213214257719122,"score_gpt":0.2713940516395876,"score_spread":0.2591808373818685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010303963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997771,0.0012545537,0.00007145735,0.00010786122,0.00009026529,0.00063099165,0.00004948911,0.000014280446,0.000010094709],"genre_scores_gemma":[0.9995688,0.00022772071,0.00008755906,0.000010478211,0.00001247832,0.000003978758,0.00006496324,0.000014705525,0.000009322224],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998451,0.00016643199,0.00088669476,0.00027000674,0.000038188617,0.0001876537],"domain_scores_gemma":[0.9987998,0.00014979462,0.0005502418,0.00024889412,0.00021582739,0.00003545387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038570145,0.00022798404,0.00067309855,0.00015100394,0.00010883351,0.000009186195,0.00007738235,0.00021818305,0.00003240522],"category_scores_gemma":[0.00008552536,0.00015433668,0.000034147193,0.00025998295,0.00004084852,0.00020148758,0.00008756785,0.00017698109,8.646369e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.025147047,0.0002780921,0.3687747,0.00011121109,0.00011932077,4.689003e-7,0.00060890696,0.000004254685,0.6027063,0.0001607266,0.0000015193741,0.0020874524],"study_design_scores_gemma":[0.011972376,0.0022222833,0.62814516,0.00013913146,0.0000957221,0.000048602276,0.00039022713,0.00018370297,0.35662866,0.000021070748,0.000040311377,0.00011277812],"about_ca_topic_score_codex":0.0008670733,"about_ca_topic_score_gemma":0.001955481,"teacher_disagreement_score":0.25937045,"about_ca_system_score_codex":0.000027268794,"about_ca_system_score_gemma":0.000033490178,"threshold_uncertainty_score":0.62936676},"labels":[],"label_agreement":null},{"id":"W2011100490","doi":"10.3791/2045","title":"Visualisation and Quantification of Intracellular Interactions of &lt;em&gt;Neisseria meningitidis&lt;/em&gt; and Human &amp;alpha;-actinin by Confocal Imaging","year":2010,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"University of Bristol; Wellcome Trust","keywords":"Cell biology; Cytoskeleton; Confocal microscopy; Endothelial stem cell; Biology; Intracellular; Integrin; Neisseria meningitidis; Bacterial adhesin; Cell culture; Vitronectin; Confocal; Receptor; Cell; Molecular biology; Biophysics; Biochemistry; Bacteria; In vitro","score_opus":0.028698244820756637,"score_gpt":0.3841209463902504,"score_spread":0.3554227015694938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011100490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99609786,0.0012669717,0.0009497793,0.00005637614,0.0013997662,0.00014436584,0.000020651834,0.000013241128,0.00005099684],"genre_scores_gemma":[0.99923474,0.00010580402,0.0003326292,0.0000114699005,0.00007819047,0.0000070410183,0.00008095373,0.000019674319,0.00012947468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851775,0.00019075812,0.0008996659,0.00017771422,0.00004737784,0.00016676067],"domain_scores_gemma":[0.9982678,0.00009948976,0.001062378,0.00015923315,0.00036114946,0.000049913484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004757094,0.00017997436,0.00044550496,0.00024744417,0.00018148618,0.000051930925,0.00010087731,0.00013792596,0.00045182995],"category_scores_gemma":[0.00011428475,0.00016478574,0.00008617744,0.000102841674,0.00015386762,0.00040541973,0.000047224097,0.00025673961,0.0000045012202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031737902,0.0003914664,0.001962037,0.000020714722,0.0001944112,3.8970023e-7,0.0017354997,2.563085e-7,0.992729,0.00063270144,0.00092712103,0.0010890298],"study_design_scores_gemma":[0.002280849,0.00026607528,0.00474373,0.000078469,0.00009136262,0.00019657187,0.0012662081,0.000013583755,0.97388715,0.000054301043,0.016973317,0.00014838789],"about_ca_topic_score_codex":0.00010264605,"about_ca_topic_score_gemma":0.000051934636,"teacher_disagreement_score":0.01884185,"about_ca_system_score_codex":0.000023222361,"about_ca_system_score_gemma":0.000033076914,"threshold_uncertainty_score":0.67197675},"labels":[],"label_agreement":null},{"id":"W2012533533","doi":"10.3109/00365548.2011.608083","title":"Rapid detection of Bordetella pertussis and Bordetella parapertussis in clinical and molecular proficiency panel specimens with a novel intercalating dye-based PCR assay","year":2011,"lang":"en","type":"article","venue":"Scandinavian Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Bordetella pertussis; Amplicon; Polymerase chain reaction; Bordetella; Microbiology; Biology; Assay sensitivity; Molecular diagnostics; Molecular biology; Virology; Bacteria; Medicine; Biochemistry; Pathology; Gene; Bioinformatics; Genetics","score_opus":0.026095250277554115,"score_gpt":0.25500832488090247,"score_spread":0.22891307460334837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012533533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99570996,0.002096148,0.0014115734,0.00003397515,0.00035661002,0.00018726273,0.000023076018,0.000017678265,0.00016370308],"genre_scores_gemma":[0.99948686,0.0002884781,0.000114968505,0.00003263996,0.000039441686,0.000007718154,0.0000029631444,0.000019185756,0.0000077506675],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842113,0.00029942684,0.0007511974,0.0002443894,0.000040393243,0.00024343994],"domain_scores_gemma":[0.99881625,0.00022447521,0.00053035066,0.00014858438,0.00019011916,0.00009021353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042831432,0.00021631627,0.00051761605,0.00037820733,0.00012215298,0.000025976797,0.00008283564,0.00016278143,0.000116904404],"category_scores_gemma":[0.00028820636,0.00015738781,0.00014615359,0.00027165047,0.00036459276,0.00014768328,0.00003518467,0.00030347027,0.000001059153],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009872793,0.00091289554,0.83119404,0.000058138936,0.000209978,0.000015872116,0.00031812984,0.0000044134713,0.13983189,0.000028489769,0.0000055221835,0.026433334],"study_design_scores_gemma":[0.005133977,0.0044906246,0.95243025,0.00046230937,0.0003329139,0.0006891805,0.00043328365,0.00004725552,0.03547404,0.00009444815,0.00013001807,0.00028172237],"about_ca_topic_score_codex":0.00013824226,"about_ca_topic_score_gemma":0.00007235269,"teacher_disagreement_score":0.12123617,"about_ca_system_score_codex":0.000032519994,"about_ca_system_score_gemma":0.00008727,"threshold_uncertainty_score":0.64180887},"labels":[],"label_agreement":null},{"id":"W2012724887","doi":"10.1016/j.meegid.2009.03.001","title":"Invasive Haemophilus influenzae disease: Changing epidemiology and host–parasite interactions in the 21st century","year":2009,"lang":"en","type":"review","venue":"Infection Genetics and Evolution","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; NOSM University; Lakehead University","funders":"","keywords":"Disease; Haemophilus influenzae; Epidemiology; Immunization; Disease Eradication; Hib vaccine; Medicine; Incidence (geometry); Immunology; Conjugate vaccine; Virology; Biology; Microbiology; Immune system; Antibiotics; Internal medicine","score_opus":0.04775782498378574,"score_gpt":0.3353763618457359,"score_spread":0.28761853686195016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012724887","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028182132,0.9693883,0.000049358037,0.00012978086,0.0014194831,0.0006229498,0.00005185662,0.000038801318,0.00011732351],"genre_scores_gemma":[0.04315608,0.95609385,0.000008141407,0.000095553616,0.00025107237,0.00011706885,0.00020641684,0.00001727992,0.000054564876],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99797666,0.0006501155,0.00057506067,0.00041026445,0.000015853391,0.00037207096],"domain_scores_gemma":[0.99885243,0.0004633615,0.0003274239,0.0002574331,0.00005759431,0.00004175892],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005077414,0.00033561466,0.0007232569,0.00057750556,0.0004400244,0.000040066785,0.0000823959,0.00033604164,0.000030698327],"category_scores_gemma":[0.00023102175,0.00025018113,0.00016570892,0.0003988161,0.00012639002,0.00010386404,0.00008448495,0.000555671,0.000045844874],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046435645,0.0002480717,0.022078624,0.0019221329,0.00030515736,0.0000033345484,0.00039519524,0.000018380342,0.00024832276,0.0053378087,0.0005487482,0.9688478],"study_design_scores_gemma":[0.00026378204,0.0001007552,0.09917394,0.0013241152,0.00041567552,0.00038188213,0.000054239234,0.0000051745706,0.0000019959737,0.00030333112,0.8977049,0.0002701872],"about_ca_topic_score_codex":0.0003008835,"about_ca_topic_score_gemma":0.00040173077,"teacher_disagreement_score":0.9685776,"about_ca_system_score_codex":0.00011291667,"about_ca_system_score_gemma":0.00008062762,"threshold_uncertainty_score":0.99999505},"labels":[],"label_agreement":null},{"id":"W2012735388","doi":"10.1016/j.jval.2011.08.967","title":"PIH65 What Are We Missing in Meningococcal Disease Modelling to Better Understand the Health and Economic Impact of New Vaccines?","year":2011,"lang":"en","type":"article","venue":"Value in Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; University of Guelph; University of Saskatchewan","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Herd immunity; Carriage; Population; Outbreak; Transmission (telecommunications); Vaccination; Meningococcal vaccine; Medicine; Disease; Epidemiology; Bacteremia; Meningitis; Immunology; Intensive care medicine; Environmental health; Virology; Biology; Immunization; Pediatrics; Computer science; Microbiology; Immune system","score_opus":0.11830472906280515,"score_gpt":0.3202182206712417,"score_spread":0.20191349160843658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012735388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98181283,0.008168231,0.00067477237,0.008617488,0.0003358441,0.0003592791,0.000012504148,0.000011413646,0.000007620016],"genre_scores_gemma":[0.9968409,0.0024681673,0.00018512123,0.00041748272,0.000042588374,0.0000050718545,0.0000063346847,0.000012822048,0.000021518243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99876684,0.00025198644,0.00043171068,0.00021578098,0.000008642719,0.00032501205],"domain_scores_gemma":[0.9994234,0.00008526137,0.00017539899,0.00018783749,0.000009312135,0.000118782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040068442,0.0001288935,0.00031498188,0.00016922221,0.000110561334,0.000023108014,0.00008232791,0.00006626594,0.00008234217],"category_scores_gemma":[0.0000119851165,0.00009364102,0.000048125672,0.00010452285,0.000023378527,0.00016847895,0.000040473384,0.00017057748,0.0000068841414],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052077593,0.0006522186,0.72395533,0.0009177939,0.00028919333,0.0000056083522,0.09335896,0.09147713,0.0022172271,0.002952757,0.007222281,0.07174373],"study_design_scores_gemma":[0.012886201,0.0046633394,0.8940727,0.0062944763,0.000058344962,0.00012838618,0.020417836,0.026776584,0.0007428922,0.024199592,0.008296375,0.0014632909],"about_ca_topic_score_codex":0.043101005,"about_ca_topic_score_gemma":0.0007965193,"teacher_disagreement_score":0.17011735,"about_ca_system_score_codex":0.0002945864,"about_ca_system_score_gemma":0.0005787701,"threshold_uncertainty_score":0.9632711},"labels":[],"label_agreement":null},{"id":"W2013005072","doi":"10.1016/s0378-1119(00)00200-6","title":"Organization and transcription of the division cell wall (dcw) cluster in Neisseria gonorrhoeae","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Promoter; FtsZ; Genetics; Neisseria gonorrhoeae; Gene; Gene cluster; Escherichia coli; Intergenic region; Terminator (solar); Transcription (linguistics); Primer extension; Molecular biology; Microbiology; Genome; Gene expression; RNA","score_opus":0.004582385121162621,"score_gpt":0.18379056609435554,"score_spread":0.1792081809731929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013005072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99889565,0.00038344116,0.000024135392,0.00015171501,0.00026260593,0.000091221475,0.0000043768346,0.000008621967,0.0001782229],"genre_scores_gemma":[0.9985665,0.00020350989,0.000010311441,0.000040618965,0.0000107472915,0.0000015971051,0.000025346075,0.000005057519,0.0011362989],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996833,0.000054830693,0.00011233988,0.000079972124,0.000002232761,0.000067286535],"domain_scores_gemma":[0.9998563,0.0000078449875,0.000023835399,0.000087761226,0.000020485526,0.0000037765371],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004659541,0.000047694768,0.00006948466,0.000023270373,0.000051102226,0.0000048269585,0.0000399165,0.00008231913,0.0011860406],"category_scores_gemma":[0.000004191701,0.00003347977,0.000014508979,0.00011385308,0.000017284712,0.000043591543,0.000010630655,0.000047278714,0.00003639951],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002095523,0.000039139213,0.009298959,0.000005634782,0.0000036901188,7.3653363e-9,0.00024673095,0.000017093236,0.98607814,0.000015415044,0.00009129331,0.0041829627],"study_design_scores_gemma":[0.00091806933,0.00005332175,0.40867528,0.0000109709445,0.000012546809,0.000010700148,0.000016963646,0.0000075679327,0.5775029,0.0000530984,0.012677707,0.000060894152],"about_ca_topic_score_codex":0.0001264743,"about_ca_topic_score_gemma":0.0000744729,"teacher_disagreement_score":0.40857524,"about_ca_system_score_codex":0.0000073477613,"about_ca_system_score_gemma":0.0000075256057,"threshold_uncertainty_score":0.999727},"labels":[],"label_agreement":null},{"id":"W2013082437","doi":"10.1097/00005792-200011000-00002","title":"Acute Bacterial Meningitis in Adults: A 12-Year Review","year":2000,"lang":"en","type":"review","venue":"Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":214,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Sciences Centre; University of Alberta","funders":"","keywords":"Medicine; Meningitis; Streptococcus pneumoniae; Gram staining; Listeria monocytogenes; Internal medicine; Antibiotics; Case fatality rate; Cerebrospinal fluid; Neisseria meningitidis; Gastroenterology; Immunology; Pediatrics; Microbiology; Bacteria; Epidemiology","score_opus":0.024650201987087565,"score_gpt":0.3124297384668551,"score_spread":0.28777953647976756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013082437","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005231311,0.99288595,4.3241556e-7,0.0002962979,0.0027808482,0.0008895631,0.00012838439,0.00006693814,0.002899288],"genre_scores_gemma":[0.0000034089762,0.99381816,0.000006440054,0.00009440654,0.00066161517,0.00019915923,0.0025375357,0.000043823075,0.002635437],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99781615,0.00035145492,0.0009936279,0.0004468291,0.000021640868,0.00037032072],"domain_scores_gemma":[0.99910414,0.000109680324,0.00028060147,0.00044254423,0.00003159172,0.000031429863],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029955758,0.0004501098,0.0027058756,0.000285294,0.00006358785,0.0000061808933,0.0002678002,0.000534514,0.032955777],"category_scores_gemma":[0.000092917246,0.0002988583,0.0002566332,0.0003633124,0.00011115136,0.00005547712,0.00005990181,0.000581116,0.0015428372],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005951772,0.000043445205,0.0000020086973,0.012874117,0.00027276026,0.000015715541,0.000035731668,1.1389909e-9,0.000039472285,0.000023704795,0.063318044,0.92331547],"study_design_scores_gemma":[0.0012009634,0.00022595101,0.0000047458384,0.16352966,0.00096004514,0.00041013473,0.0000031171103,4.3431054e-9,0.0000017908319,0.0000036725023,0.83343685,0.00022307113],"about_ca_topic_score_codex":0.00023153563,"about_ca_topic_score_gemma":0.000067844085,"teacher_disagreement_score":0.9230924,"about_ca_system_score_codex":0.00006760054,"about_ca_system_score_gemma":0.000100605714,"threshold_uncertainty_score":0.99994636},"labels":[],"label_agreement":null},{"id":"W2013289605","doi":"10.1371/journal.pone.0006284","title":"Adult Vaccination Strategies for the Control of Pertussis in the United States: An Economic Evaluation Including the Dynamic Population Effects","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Sanofi Pasteur; Sanofi","keywords":"Vaccination; Medicine; Herd immunity; Incidence (geometry); Booster (rocketry); Population; Pediatrics; Pertussis vaccine; Immunization; Whooping cough; Booster dose; Immunology; Environmental health; Immune system; Mathematics","score_opus":0.038645531825057054,"score_gpt":0.29594878482865106,"score_spread":0.257303253003594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013289605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962773,0.00019644554,0.00044169847,0.0018109875,0.0001281269,0.0010964082,0.000018153129,0.000015196641,0.000015692824],"genre_scores_gemma":[0.99916935,0.00008025732,0.000010836023,0.00015506246,0.000029375175,0.00014744597,0.00039439808,0.0000047572453,0.0000085376405],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99917877,0.0003981991,0.0002004839,0.0000979623,0.000020189778,0.00010439473],"domain_scores_gemma":[0.9989605,0.0006029158,0.00013339566,0.00017058988,0.00012943201,0.0000031737736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006416801,0.0000771275,0.00012739038,0.00008194143,0.00023795584,0.00003414737,0.000121841884,0.00007195949,0.00003265686],"category_scores_gemma":[0.00012367785,0.000039536946,0.000031948413,0.000098750716,0.000014029552,0.00016358618,0.0000057380985,0.0000888421,0.0000031467682],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015774757,0.002919277,0.014125579,0.00017680753,0.0012073343,1.6105679e-7,0.012078869,0.01955396,0.843687,0.02648598,0.00019481266,0.077992745],"study_design_scores_gemma":[0.0040392755,0.0010209385,0.7668267,0.000091195325,0.00066703616,0.0000033814338,0.003157626,0.20823215,0.0069912355,0.008763185,0.000051477615,0.00015581114],"about_ca_topic_score_codex":0.0007800105,"about_ca_topic_score_gemma":0.0011402993,"teacher_disagreement_score":0.8366958,"about_ca_system_score_codex":0.000057774057,"about_ca_system_score_gemma":0.000022252583,"threshold_uncertainty_score":0.1830188},"labels":[],"label_agreement":null},{"id":"W2013293129","doi":"10.1016/j.vaccine.2015.04.015","title":"MATS: Global coverage estimates for 4CMenB, a novel multicomponent meningococcal B vaccine","year":2015,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal vaccine; Typing; Meningococcal disease; Antigen; Neisseria meningitidis; Medicine; Virology; Biology; Microbiology; Immunology; Bacteria; Immunization; Genetics","score_opus":0.053103473610759296,"score_gpt":0.34344443429788013,"score_spread":0.29034096068712084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013293129","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00040269658,0.9899868,0.0015487822,0.00009198652,0.0034403137,0.0021447665,0.0019759191,0.00027816938,0.00013059043],"genre_scores_gemma":[0.00017143485,0.9913036,0.0012056716,0.000044336808,0.000621632,0.0005276187,0.005051302,0.00012678823,0.0009475971],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99728805,0.000105043895,0.0011085449,0.0007546766,0.000030606494,0.0007130733],"domain_scores_gemma":[0.9981611,0.00029543295,0.000567994,0.0006364517,0.0002464463,0.00009262096],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003838333,0.00086902594,0.002810056,0.00019286336,0.00024308957,0.0000725739,0.00045378905,0.0009094425,0.0006393382],"category_scores_gemma":[0.00017989425,0.00064667524,0.0006300493,0.00033299462,0.000010856614,0.00012539742,0.00028889655,0.00039190752,0.0006847696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006394793,0.001405026,0.00012593773,0.008111194,0.0033599245,0.000005256958,0.00003984335,0.0000071421505,0.0043394794,0.0013836614,0.0642906,0.9162924],"study_design_scores_gemma":[0.004884071,0.00038093393,0.00007792414,0.0018482717,0.0017570909,0.0005342513,0.000005759138,0.000010019954,0.000058774614,0.00008390476,0.9897125,0.0006465007],"about_ca_topic_score_codex":0.00020255362,"about_ca_topic_score_gemma":0.000034062956,"teacher_disagreement_score":0.9254219,"about_ca_system_score_codex":0.0003343459,"about_ca_system_score_gemma":0.00023041734,"threshold_uncertainty_score":0.99959844},"labels":[],"label_agreement":null},{"id":"W2013591647","doi":"10.1097/00006454-200210000-00004","title":"Outcome of penicillin-nonsusceptible Streptococcus pneumoniae meningitis: a nested case-control study","year":2002,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Children's Hospital; Canadian Society for Digital Humanities; Canadian Paediatric Society","funders":"Agência Regional para o Desenvolvimento da Investigação, Tecnologia e Inovação; Impact Fund","keywords":"Medicine; Meningitis; Penicillin; Streptococcus pneumoniae; Vancomycin; Odds ratio; Surgery; Antibiotics; Empiric therapy; Pediatrics; Internal medicine; Staphylococcus aureus; Microbiology","score_opus":0.018960346349304956,"score_gpt":0.25390545456080915,"score_spread":0.2349451082115042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013591647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951611,0.0016507703,0.000068909045,0.00012139844,0.0018022198,0.0007528165,0.000120127064,0.00009713244,0.00022548994],"genre_scores_gemma":[0.9986112,0.00017297202,0.0000018836232,0.000027922908,0.0006417915,0.00005867683,0.0000019230908,0.000028071137,0.00045556706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99781346,0.00067341025,0.0008001252,0.00022707252,0.00005633392,0.0004295878],"domain_scores_gemma":[0.9983598,0.00038200634,0.00050681236,0.00039110822,0.00025343496,0.0001068383],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00057308294,0.00027229125,0.00043041128,0.00030992937,0.0009160678,0.000077649274,0.00022531749,0.000116416115,0.0037259138],"category_scores_gemma":[0.00027002435,0.00018355534,0.0003112691,0.0004391244,0.00007439547,0.00016794882,0.00006532187,0.00064108067,0.0002513974],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007678694,0.0011920865,0.9939711,0.000016471642,0.00036648635,0.00019569932,0.00046919234,0.00018159047,0.0016370988,0.000017326585,0.0009469416,0.000929182],"study_design_scores_gemma":[0.012057901,0.0022727912,0.9600619,0.00001685793,0.0046023633,0.017873555,0.0012940627,0.00013512999,0.00006368762,0.00023925595,0.00069330825,0.00068918755],"about_ca_topic_score_codex":0.00015769959,"about_ca_topic_score_gemma":0.000080248814,"teacher_disagreement_score":0.03390924,"about_ca_system_score_codex":0.00006071828,"about_ca_system_score_gemma":0.000055352193,"threshold_uncertainty_score":0.9971848},"labels":[],"label_agreement":null},{"id":"W2013725503","doi":"10.1016/s0378-1119(02)01208-8","title":"Identification of opcA gene in Neisseria polysaccharea : interspecies diversity of Opc protein family","year":2003,"lang":"en","type":"article","venue":"Gene","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Population and Public Health","funders":"U.S. Food and Drug Administration","keywords":"Biology; Neisseria; Genetics; Gene; Homology (biology); Genome; Molecular biology; Bacteria","score_opus":0.018044245789559862,"score_gpt":0.22907414558214242,"score_spread":0.21102989979258258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013725503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985611,0.0005750073,0.0001476549,0.000024100096,0.00038562558,0.00015627207,0.00004155358,0.000009822714,0.00009888974],"genre_scores_gemma":[0.99936795,0.000046774487,0.00007043791,0.000004609292,0.000007658799,0.0000072489875,0.000020529915,0.0000039969186,0.00047078324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994475,0.00008253789,0.0002453837,0.00011741742,0.000007773629,0.00009934896],"domain_scores_gemma":[0.99962133,0.000009882665,0.00012806816,0.00016462004,0.000069893074,0.000006221273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014185753,0.000065719454,0.00015793084,0.00010548052,0.00005271995,0.0000032562295,0.00009347788,0.00008895091,0.00024529675],"category_scores_gemma":[0.000037597536,0.00006344341,0.000043505766,0.00014032346,0.00004470065,0.00005786028,0.0000662281,0.000052316,0.000023330373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050539926,0.00009809412,0.007586174,0.000010312474,0.000034343648,1.1975958e-7,0.00027414862,0.0000017785245,0.9909633,0.000629111,0.000067841036,0.00028426468],"study_design_scores_gemma":[0.00040460995,0.00005382839,0.10038248,0.00000989859,0.000010013016,0.000003931156,0.00022320592,2.5020682e-7,0.8983024,0.0001214039,0.00043700778,0.000051006],"about_ca_topic_score_codex":0.00051443983,"about_ca_topic_score_gemma":0.000065028275,"teacher_disagreement_score":0.0927963,"about_ca_system_score_codex":0.000018370733,"about_ca_system_score_gemma":0.00001980736,"threshold_uncertainty_score":0.26858273},"labels":[],"label_agreement":null},{"id":"W2013735067","doi":"10.1016/j.vaccine.2011.12.032","title":"The changing and dynamic epidemiology of meningococcal disease","year":2011,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":304,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia; Capital District Health Authority; Dalhousie University; Izaak Walton Killam Health Centre","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Medicine; Neisseria meningitidis; Epidemiology; Vaccination; Meningitis; Incidence (geometry); Virology; Disease burden; Outbreak; Mass vaccination; Disease; Immunization; Conjugate vaccine; Immunology; Pediatrics; Intensive care medicine; Biology; Antigen; Internal medicine","score_opus":0.04233449934850354,"score_gpt":0.3245096430849145,"score_spread":0.28217514373641095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013735067","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00076459144,0.99774504,0.000024207571,0.000050402017,0.0009660388,0.00033225727,0.000050822255,0.000029939312,0.000036726757],"genre_scores_gemma":[0.00059234054,0.9978323,0.000012433783,0.000008075648,0.000059176113,0.00004506559,0.0001319396,0.000023752218,0.0012949319],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99842983,0.00041880086,0.0005658057,0.00025583163,0.0000035924254,0.00032614393],"domain_scores_gemma":[0.9984691,0.0007211567,0.00039443592,0.00035186933,0.00003399064,0.000029426828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005123357,0.00025186496,0.0011469502,0.00016448302,0.0002259771,0.0000029122614,0.00018070466,0.00028047338,0.00019927265],"category_scores_gemma":[0.00025096568,0.00013853154,0.000224579,0.00015111771,0.00003988113,0.000025461157,0.0001860133,0.0002654502,0.00006703405],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051349984,0.00003305363,0.00031563183,0.0015779791,0.0004083277,5.142122e-7,0.000038642127,2.2152303e-8,0.000026223493,0.0036959245,0.00040567052,0.99344665],"study_design_scores_gemma":[0.0002083029,0.00006248812,0.00065448193,0.0010101594,0.00052715465,0.00006653848,0.000009063388,7.3515315e-7,0.0000017872326,0.00017074589,0.99715245,0.00013610376],"about_ca_topic_score_codex":0.000039635743,"about_ca_topic_score_gemma":0.000015154176,"teacher_disagreement_score":0.9967468,"about_ca_system_score_codex":0.0000151824,"about_ca_system_score_gemma":0.000047643374,"threshold_uncertainty_score":0.5649152},"labels":[],"label_agreement":null},{"id":"W2013778612","doi":"10.1007/s10719-010-9287-0","title":"Investigating the candidacy of LPS-based glycoconjugates to prevent invasive meningococcal disease: chemical strategies to prepare glycoconjugates with good carbohydrate loading","year":2010,"lang":"en","type":"article","venue":"Glycoconjugate Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; Steacie Institute for Molecular Sciences","funders":"Beijing Advanced Innovation Center for Structural Biology, Tsinghua University","keywords":"Glycoconjugate; Chemistry; Teichoic acid; Reductive amination; Biochemistry; Glycosidic bond; Residue (chemistry); Lipid A; Oligosaccharide; Lipopolysaccharide; Biology; Enzyme","score_opus":0.009046476244012535,"score_gpt":0.24785275245282196,"score_spread":0.23880627620880943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013778612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99460673,0.00020057014,0.00013082333,0.002207934,0.0010408069,0.0012387898,0.000104002225,0.00010024744,0.00037007165],"genre_scores_gemma":[0.9981067,0.00001300249,0.00058496004,0.0003839032,0.00037865347,0.000247608,0.000054450386,0.00006346702,0.00016724176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99724543,0.00025109222,0.00094078167,0.00057464105,0.00012407529,0.00086397934],"domain_scores_gemma":[0.99739355,0.00049568847,0.00055059657,0.0006242839,0.0005044982,0.00043138326],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006465913,0.0005524948,0.0006598948,0.00027646057,0.0007657188,0.00036816025,0.0007151567,0.00024622958,0.0005853119],"category_scores_gemma":[0.00058838516,0.00036207293,0.0002248358,0.0005471633,0.00038681243,0.00041987796,0.00021676741,0.000995191,0.00007641231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006655973,0.00019223268,0.007152316,0.000057902434,0.00031542775,0.000011654737,0.0012020887,0.000720077,0.98757535,0.00083647383,0.0008622303,0.00040866047],"study_design_scores_gemma":[0.0021866409,0.001011656,0.0057211025,0.00054164627,0.00028961475,0.00036691307,0.0010232115,0.000030622763,0.9747056,0.0006800733,0.012752865,0.000690083],"about_ca_topic_score_codex":0.0004949198,"about_ca_topic_score_gemma":0.000985492,"teacher_disagreement_score":0.012869768,"about_ca_system_score_codex":0.00008284228,"about_ca_system_score_gemma":0.0010339393,"threshold_uncertainty_score":0.9998831},"labels":[],"label_agreement":null},{"id":"W2014425302","doi":"10.1016/s0264-410x(02)00446-2","title":"Detection of residual pertussis toxin in vaccines using a modified ribosylation assay","year":2002,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"National Institutes of Health","keywords":"Pertussis toxin; ADP-ribosylation; Toxin; Anthrax toxin; Chemistry; In vivo; Histamine; Molecular biology; Enzyme; Pharmacology; Biochemistry; Biology; G protein; Recombinant DNA; Fusion protein; Receptor","score_opus":0.03028808617920534,"score_gpt":0.2500893752437454,"score_spread":0.21980128906454008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014425302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974536,0.00083191367,0.00054142124,0.00016778536,0.00056317484,0.00015420082,0.000009341972,0.00004584549,0.00023273675],"genre_scores_gemma":[0.9992588,0.00008204979,0.00006393021,0.000012481895,0.00008377734,0.0000057934694,0.000017132645,0.000013322213,0.0004626676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990512,0.00016120223,0.0003801895,0.0001971517,0.000014432264,0.00019581392],"domain_scores_gemma":[0.9995099,0.00008036932,0.00013641347,0.00018933407,0.00007245283,0.000011559711],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020939611,0.00013214818,0.0002603886,0.00031227525,0.00008931403,0.000008669979,0.00007053693,0.00020253548,0.0011929481],"category_scores_gemma":[0.00011142661,0.0001153352,0.000054751963,0.00036757486,0.000005392739,0.00015232022,0.00003277135,0.0001404847,0.000042460626],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012072114,0.00014319558,0.012435417,0.00001255527,0.00003584486,4.3453295e-7,0.00013643304,0.00016784498,0.9787539,0.00004976252,0.000214765,0.007929118],"study_design_scores_gemma":[0.0046596993,0.0003358294,0.19254994,0.00007309001,0.000081757506,0.00009415683,0.00014297324,0.00394999,0.7940768,0.0001422157,0.0035648567,0.00032867235],"about_ca_topic_score_codex":0.0009196337,"about_ca_topic_score_gemma":0.00055066677,"teacher_disagreement_score":0.1846771,"about_ca_system_score_codex":0.000034671364,"about_ca_system_score_gemma":0.000007577218,"threshold_uncertainty_score":0.9997201},"labels":[],"label_agreement":null},{"id":"W2015003861","doi":"10.1139/w05-079","title":"Genetic and antigenic analysis of<i>Bordetella pertussis</i>isolates recovered from clinical cases in Ontario, Canada, before and after the introduction of the acellular pertussis vaccine","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Pertactin; Bordetella pertussis; Biology; Pertussis toxin; Serotype; Genetic analysis; Virology; Pulsed-field gel electrophoresis; Microbiology; Pertussis vaccine; Genetic variation; Genetic divergence; Genotype; Genetic diversity; Antigen; Gene; Genetics; Immunization; Medicine; Bacteria; Population; G protein","score_opus":0.007139688908491929,"score_gpt":0.20200154628916422,"score_spread":0.1948618573806723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015003861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893513,0.0073982337,0.0000022954846,0.0022258935,0.00072174805,0.00008580528,0.00021169317,7.4526685e-7,0.0000022911836],"genre_scores_gemma":[0.9992497,0.0002947218,0.000037280846,0.00014313046,0.00011140392,0.0000011455757,0.000031028314,0.000006529481,0.00012504884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99857265,0.00033017524,0.0007072767,0.00017430451,0.000007912406,0.00020767273],"domain_scores_gemma":[0.99906063,0.00018503604,0.00036785885,0.0002144162,0.00012011707,0.000051949635],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002647429,0.00013239462,0.0005310259,0.00022384703,0.00010075115,0.000008429359,0.00015976022,0.00020833031,0.00094792165],"category_scores_gemma":[0.00012296485,0.00007845441,0.00014707108,0.0002097345,0.00021399459,0.00003948794,0.000033550776,0.0003406576,5.3492e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016310377,0.000018789513,0.82987887,0.0000029283246,0.0009347312,0.000004061109,0.00043127523,0.000029392706,0.16488938,0.0000022953502,0.0012069319,0.0024382253],"study_design_scores_gemma":[0.0005660797,0.00017055166,0.9323358,0.000017679546,0.0006528266,0.0005146395,0.00015833312,0.00000489507,0.003771276,0.000008698105,0.061716974,0.000082243205],"about_ca_topic_score_codex":0.9032439,"about_ca_topic_score_gemma":0.99955475,"teacher_disagreement_score":0.1611181,"about_ca_system_score_codex":0.00011105504,"about_ca_system_score_gemma":0.00090664765,"threshold_uncertainty_score":0.99996537},"labels":[],"label_agreement":null},{"id":"W2015390700","doi":"10.1016/s0008-6215(02)00395-6","title":"Conjugation of meningococcal lipooligosaccharides through their lipid A terminus conserves their inner epitopes and results in conjugate vaccines having improved immunological properties","year":2003,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Toxoid; Chemistry; Oligosaccharide; Epitope; Residue (chemistry); Lipid A; Reductive amination; Conjugate; Glycolipid; Biochemistry; Antibody; Stereochemistry; Lipopolysaccharide; Biology; Immunization; Immunology","score_opus":0.06627107969051922,"score_gpt":0.29997216995512144,"score_spread":0.23370109026460223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015390700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933444,0.0047817547,0.0000043882033,0.0004576223,0.00036896803,0.00063150213,0.00004648285,0.000049302565,0.00031554422],"genre_scores_gemma":[0.9981178,0.0013130965,0.000036889236,0.000015289148,0.0000478188,0.00014770703,0.000033058113,0.000021637432,0.00026672284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99685544,0.0012713656,0.00075274886,0.00048553437,0.000035006957,0.0005999163],"domain_scores_gemma":[0.9984118,0.0006104551,0.00017305787,0.0003692397,0.00040458803,0.000030900894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016916752,0.00026615476,0.0005378892,0.00029691553,0.00031480737,0.00008243149,0.00021811976,0.00036232529,0.000052766773],"category_scores_gemma":[0.0011963084,0.00017561142,0.00007186665,0.00047204856,0.0005915355,0.00029103542,0.00019918072,0.00059718924,0.0000119165625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000634572,0.00013677849,0.0029422506,0.00005012143,0.000094873605,0.0000023731716,0.00219912,0.0000023076016,0.9909024,0.00092252454,0.0000464845,0.0020661426],"study_design_scores_gemma":[0.002239297,0.0005527775,0.009145842,0.00018861338,0.000011466569,0.00005872635,0.002230288,0.00004775689,0.9814683,0.0008063725,0.0030153622,0.00023519223],"about_ca_topic_score_codex":0.0020224575,"about_ca_topic_score_gemma":0.00026943712,"teacher_disagreement_score":0.009434146,"about_ca_system_score_codex":0.000047138285,"about_ca_system_score_gemma":0.00014753676,"threshold_uncertainty_score":0.71612257},"labels":[],"label_agreement":null},{"id":"W2015420183","doi":"10.1371/journal.ppat.1003509","title":"In Vivo Adaptation and Persistence of Neisseria meningitidis within the Nasopharyngeal Mucosa","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; McGill University","keywords":"Neisseria meningitidis; Biology; Microbiology; Bacterial adhesin; Immunology; Human pathogen; Innate immune system; Neisseria; Immunity; Meningococcal vaccine; In vivo; Antigen; Immune system; Immunization; Bacteria; Gene; Virulence; Genetics","score_opus":0.026614529780881666,"score_gpt":0.2186808066487459,"score_spread":0.19206627686786423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015420183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871576,0.00038817062,0.0000060759085,0.00022815798,0.00022199236,0.00017354797,0.00002134419,0.000011814601,0.0002331587],"genre_scores_gemma":[0.9995294,0.000029915398,0.00008406472,0.000032501128,0.000018105251,0.000034159228,0.0000069226894,0.0000054253196,0.0002594829],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954057,0.00007891922,0.00015825946,0.00011285788,0.000007133786,0.00010224222],"domain_scores_gemma":[0.9997073,0.0000588523,0.000070876944,0.00010643569,0.000047929716,0.0000085983065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077275734,0.000070866365,0.000119652104,0.000042133688,0.00007675317,0.000009883041,0.00005470691,0.00006817498,0.0005918303],"category_scores_gemma":[0.000040195937,0.000048831953,0.000025683794,0.00008368296,0.000061553656,0.00011468703,0.000027379023,0.00007590692,0.000035792214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016115919,0.000043342527,0.005159838,0.000008317074,0.000028234166,2.3992868e-7,0.0015496901,0.0000037086763,0.9925454,0.00031811665,0.000103849714,0.00022312925],"study_design_scores_gemma":[0.0014534249,0.0004445045,0.16973244,0.00009156589,0.00011068221,0.000106647196,0.006143492,0.0005462103,0.8193829,0.00068424194,0.0010098326,0.0002940327],"about_ca_topic_score_codex":0.0003355733,"about_ca_topic_score_gemma":0.00011250758,"teacher_disagreement_score":0.17316249,"about_ca_system_score_codex":0.00000706309,"about_ca_system_score_gemma":0.000013888931,"threshold_uncertainty_score":0.64801264},"labels":[],"label_agreement":null},{"id":"W2015470994","doi":"10.1371/journal.pone.0086243","title":"The Negatively Charged Regions of Lactoferrin Binding Protein B, an Adaptation against Anti-Microbial Peptides","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Alberta Innovates; Fondation pour la Recherche Médicale","keywords":"Lactoferrin; Biology; Microbiology; Peptide; In vivo; Antimicrobial peptides; Biochemistry; Peptide sequence; Chemistry","score_opus":0.05144662610950885,"score_gpt":0.23234683561559832,"score_spread":0.18090020950608948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015470994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99873775,0.000033092412,0.000070541064,0.00027808707,0.00013399424,0.00031228745,0.000021978716,0.000056600933,0.00035563632],"genre_scores_gemma":[0.9982123,0.00004133579,0.00019910053,0.000013377334,0.00007118191,0.00003444777,0.00008121844,0.0000132599835,0.0013338269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991771,0.00024970964,0.0002226231,0.00015101767,0.000016609956,0.00018292134],"domain_scores_gemma":[0.9993958,0.00008886717,0.00016755024,0.00020261465,0.00013099353,0.0000141792025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023601769,0.00010217557,0.00019567898,0.000065636756,0.0003931245,0.000022548034,0.00012285553,0.00010919034,0.000047683614],"category_scores_gemma":[0.00018701282,0.00007551783,0.000043751705,0.00011054385,0.000101706806,0.00013079162,0.000030167694,0.0001505791,0.000083120154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058272813,0.00041665448,0.0004263761,0.000015327065,0.00013765295,5.089496e-8,0.00029524587,0.0000011508454,0.99565375,0.0020642227,0.00006087705,0.000870447],"study_design_scores_gemma":[0.00063241745,0.0002433659,0.0042007975,0.00011887091,0.00004312533,0.0000019978427,0.0002203628,0.00003610538,0.9929998,0.00009359985,0.0012970422,0.00011255231],"about_ca_topic_score_codex":0.000104221726,"about_ca_topic_score_gemma":0.00014118313,"teacher_disagreement_score":0.0037744215,"about_ca_system_score_codex":0.000013948003,"about_ca_system_score_gemma":0.000024898656,"threshold_uncertainty_score":0.3079528},"labels":[],"label_agreement":null},{"id":"W2015901073","doi":"10.1503/cmaj.1040766","title":"Diagnosis and management of pertussis","year":2005,"lang":"en","type":"review","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bordetella pertussis; Medicine; Azithromycin; Pediatrics; Clarithromycin; Gold standard (test); Serology; Whooping cough; Bordetella; Disease; Immunity; Erythromycin; Intensive care medicine; Immunology; Vaccination; Internal medicine; Antibiotics; Immune system","score_opus":0.01996972211343748,"score_gpt":0.28453268952235733,"score_spread":0.2645629674089198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015901073","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011374156,0.9967063,9.866833e-7,0.0009890321,0.0012543019,0.00012295276,0.00006653351,0.000005812362,0.0007403614],"genre_scores_gemma":[0.000031618492,0.9982591,0.000015246462,0.00013460508,0.00040050517,0.000024236235,0.00003260886,0.000012016903,0.0010900463],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988338,0.00021804565,0.00051449257,0.0001191721,0.0000553174,0.00025916804],"domain_scores_gemma":[0.9991356,0.00014027912,0.00036222715,0.00007361854,0.00009107878,0.0001971553],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005999116,0.00014481579,0.0006486401,0.0002171778,0.00016577585,0.000026054857,0.00014023199,0.00081644155,0.008723342],"category_scores_gemma":[0.00013701642,0.000111920584,0.00019274133,0.00013267293,0.000029102965,0.00004140275,0.000024700252,0.000633146,0.0001717353],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[4.3536636e-7,0.000014955813,0.00016888397,0.00039790192,0.00063332985,0.0000089755395,0.000011990466,5.605668e-9,6.340857e-8,0.00009948305,0.041126158,0.95753783],"study_design_scores_gemma":[0.00021621218,0.000016755459,0.00032466784,0.002737043,0.0004019842,0.00040185644,0.000020589294,3.924274e-8,2.2256428e-7,0.000004011979,0.9957744,0.00010220522],"about_ca_topic_score_codex":0.00075677526,"about_ca_topic_score_gemma":0.003719904,"teacher_disagreement_score":0.9574356,"about_ca_system_score_codex":0.00034388513,"about_ca_system_score_gemma":0.00063175854,"threshold_uncertainty_score":0.9921828},"labels":[],"label_agreement":null},{"id":"W2016308731","doi":"10.1371/journal.pone.0083850","title":"Estimation of the Underlying Burden of Pertussis in Adolescents and Adults in Southern Ontario, Canada","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"Sanofi; GlaxoSmithKline","keywords":"Vaccination; Outbreak; Pertussis vaccine; Medicine; Transmission (telecommunications); Incidence (geometry); Whooping cough; Herd immunity; Bordetella pertussis; Population; Pediatrics; Immunity; Disease burden; Demography; Booster (rocketry); Immunology; Environmental health; Immunization; Virology; Biology; Immune system","score_opus":0.02086480981452957,"score_gpt":0.19920190282157588,"score_spread":0.1783370930070463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016308731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996017,0.00007396202,4.6624146e-7,0.00010906134,0.00003996709,0.00014210178,0.0000047117674,0.0000017210814,0.000026291043],"genre_scores_gemma":[0.9997708,0.0000034743996,0.000011877013,0.000007018474,0.0000021164633,0.000007034595,0.0000031963646,0.0000023973378,0.00019204753],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997056,0.000032998152,0.00013269875,0.00005552915,0.000009597894,0.00006357167],"domain_scores_gemma":[0.99983865,0.000013085893,0.00005198219,0.00006905384,0.000023483854,0.000003734679],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000026886195,0.000037789167,0.000106936815,0.00002907613,0.000017256833,0.0000018667101,0.000037880294,0.00004583439,0.00013903054],"category_scores_gemma":[0.000024491987,0.000027355683,0.000007869019,0.000047299804,0.000018191415,0.000027987628,0.00002159827,0.00007059145,0.0000024918595],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038373626,0.0002700683,0.6211211,0.000094197785,0.000043062228,5.2731025e-8,0.0033974834,0.000026458822,0.3723279,0.0000071117365,0.000014681715,0.002659484],"study_design_scores_gemma":[0.0007038736,0.000027705444,0.9825446,0.0006621038,0.000013951332,6.8930126e-7,0.0008460969,0.00013863327,0.014986717,0.000029869694,0.0000036499177,0.000042111496],"about_ca_topic_score_codex":0.9880525,"about_ca_topic_score_gemma":0.98316026,"teacher_disagreement_score":0.36142346,"about_ca_system_score_codex":0.00003869599,"about_ca_system_score_gemma":0.00006194367,"threshold_uncertainty_score":0.15222868},"labels":[],"label_agreement":null},{"id":"W2016357226","doi":"10.1097/inf.0b013e31818e037d","title":"Immunogenicity and Immune Memory of a Nonadjuvanted Quadrivalent Meningococcal Glycoconjugate Vaccine in Infants","year":2009,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"British Columbia Children's Hospital; Queen Elizabeth II Health Sciences Centre; Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Reactogenicity; Medicine; Immunogenicity; Neisseria meningitidis; Meningococcal disease; Meningococcal vaccine; Pediatrics; Booster dose; Vaccination; Immunology; Confidence interval; Immunization; Internal medicine; Immune system; Biology","score_opus":0.0057452323413416505,"score_gpt":0.23029033094067644,"score_spread":0.2245450985993348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016357226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903648,0.007911178,0.000031611344,0.00036567316,0.00084777747,0.00027937227,0.000017700511,0.000036296646,0.00014559731],"genre_scores_gemma":[0.9971552,0.0024162189,0.0000063954803,0.00005662633,0.00027520818,0.000008602221,0.000006386047,0.000011487279,0.00006390806],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998449,0.0003202983,0.0006657595,0.00017604134,0.000037034315,0.00035183874],"domain_scores_gemma":[0.9990439,0.00015197984,0.0003677131,0.00024517917,0.00012360048,0.00006764433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005829279,0.00021272292,0.00038130695,0.0003126018,0.00034209422,0.000032972734,0.00017593185,0.00011855897,0.00031914873],"category_scores_gemma":[0.00019010897,0.00014756054,0.0001601492,0.00035234084,0.000052464988,0.00016154189,0.00007378289,0.0005499825,0.00002165945],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037978452,0.0014948272,0.7174908,0.000059107726,0.00037840076,0.00003192487,0.0010411558,0.00019759708,0.26133016,0.0003076077,0.0006806073,0.01318999],"study_design_scores_gemma":[0.004746496,0.00041977572,0.99037343,0.000028044658,0.0002881752,0.00093971385,0.000059633312,0.000022490087,0.001566123,0.0011943973,0.00015585001,0.00020588345],"about_ca_topic_score_codex":0.00023943995,"about_ca_topic_score_gemma":0.00003231521,"teacher_disagreement_score":0.27288264,"about_ca_system_score_codex":0.00005141718,"about_ca_system_score_gemma":0.00013885235,"threshold_uncertainty_score":0.60173446},"labels":[],"label_agreement":null},{"id":"W2017082020","doi":"10.1016/j.vaccine.2006.08.001","title":"Phase 1 first-in-human studies of the reactogenicity and immunogenicity of a recombinant meningococcal NspA vaccine in healthy adults","year":2006,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GlaxoSmithKline (Canada); Dalhousie University; Izaak Walton Killam Health Centre","funders":"Clinical Trial Center, China Medical University Hospital","keywords":"Reactogenicity; Immunogenicity; Neisseria meningitidis; Medicine; Meningococcal vaccine; Immunoassay; Antibody; Adverse effect; Immunization; Immunology; Microbiology; Pharmacology; Biology; Bacteria","score_opus":0.017933006328631672,"score_gpt":0.2930305166503802,"score_spread":0.27509751032174856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017082020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99357414,0.0049308497,0.0000012525865,0.0005595059,0.0004766242,0.00039650523,0.000020072708,0.000014126675,0.000026924989],"genre_scores_gemma":[0.9992807,0.00054374174,0.000012631,0.000013537483,0.000024532992,0.000017387943,0.000021200462,0.000010511588,0.00007575692],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985332,0.00016046248,0.000785081,0.000247186,0.000017159497,0.00025693816],"domain_scores_gemma":[0.9991319,0.00014190532,0.00031751645,0.00030206982,0.000096003634,0.000010602394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035106644,0.00017550991,0.00058443786,0.00016967449,0.00012238082,0.0000029266648,0.00014307818,0.00014544139,0.00007847813],"category_scores_gemma":[0.00008628309,0.00012085397,0.0000862307,0.00034891296,0.000029288427,0.00006583882,0.0001473103,0.00022348439,0.0000017013747],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046505337,0.0021666398,0.27940035,0.00015834186,0.00012540395,0.0000012613573,0.00053284556,0.0000070239603,0.71093804,0.0004466195,0.00052688026,0.0010460536],"study_design_scores_gemma":[0.030789824,0.002489075,0.8003931,0.0003477342,0.000060619637,0.000049131337,0.00025611685,0.000009159642,0.16213833,0.00045179177,0.002804988,0.00021012011],"about_ca_topic_score_codex":0.01092455,"about_ca_topic_score_gemma":0.015367784,"teacher_disagreement_score":0.5487997,"about_ca_system_score_codex":0.000049640883,"about_ca_system_score_gemma":0.000024344015,"threshold_uncertainty_score":0.9956618},"labels":[],"label_agreement":null},{"id":"W2017206568","doi":"10.1016/j.vaccine.2014.09.059","title":"Seasonal variation in rates of emergency room visits and acute admissions following recommended infant vaccinations in Ontario, Canada: A self-controlled case series analysis","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institute for Clinical Evaluative Sciences; Children's Hospital of Eastern Ontario; Ottawa Hospital; University of Ottawa","funders":"","keywords":"Vaccination; Medicine; Emergency department; Pediatrics; Emergency medicine; Virology; Nursing","score_opus":0.008178939765422904,"score_gpt":0.24589281508554478,"score_spread":0.23771387532012186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017206568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99815035,0.00018089835,0.000062246196,0.0007646737,0.00049146055,0.00025397414,0.000022431557,0.000017852179,0.000056104098],"genre_scores_gemma":[0.9992083,0.000041360083,0.0001421861,0.00002069807,0.000014029332,0.00003296722,0.00010610835,0.000007538088,0.0004268301],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987616,0.00022773117,0.0005520786,0.00023047804,0.000018505163,0.0002095862],"domain_scores_gemma":[0.99939924,0.00014435696,0.00017222502,0.00016424639,0.00008078658,0.000039124177],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033864463,0.00015908467,0.00058133184,0.00040499703,0.00014122677,0.000009741065,0.00006110522,0.00012577296,0.0014042209],"category_scores_gemma":[0.00018668783,0.00013721368,0.000101803336,0.00065221894,4.3982584e-7,0.00017643406,0.00004850154,0.00017907862,0.00000111647],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000444959,0.00021959326,0.9669485,0.000009558271,0.0018060434,0.00002269365,0.0007262706,0.00008909493,0.0287142,0.00032891988,0.0003973172,0.00029286413],"study_design_scores_gemma":[0.006210056,0.00012081452,0.9896824,0.000017045364,0.00074956194,0.00010807098,0.00008640007,0.0004949649,0.0007428917,0.000112847076,0.0015058019,0.00016918425],"about_ca_topic_score_codex":0.7895268,"about_ca_topic_score_gemma":0.99567777,"teacher_disagreement_score":0.20615096,"about_ca_system_score_codex":0.00013952826,"about_ca_system_score_gemma":0.0002905782,"threshold_uncertainty_score":0.9995086},"labels":[],"label_agreement":null},{"id":"W2018762110","doi":"10.1016/j.ajic.2006.05.137","title":"Vaccinating Healthcare Workers for Pertussis: A Shared North American Experience","year":2006,"lang":"en","type":"article","venue":"American Journal of Infection Control","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shriners Hospitals for Children - Canada","funders":"","keywords":"Medicine; Tetanus; Bordetella pertussis; Diphtheria; Vaccination; Health care; Toxoid; Pediatrics; Medical emergency; Family medicine; Immunology","score_opus":0.00895555440690894,"score_gpt":0.2646973559862001,"score_spread":0.25574180157929116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018762110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98702115,0.00021521862,0.010314138,0.0011052872,0.0010174795,0.00022093656,0.000028255437,0.00004515526,0.000032408487],"genre_scores_gemma":[0.9988595,0.00003402558,0.00029693477,0.00026845245,0.00039419872,0.0000578856,0.000013422499,0.000019479707,0.00005605341],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99865556,0.00019569481,0.0006157041,0.00017644558,0.000028714125,0.00032787022],"domain_scores_gemma":[0.9979541,0.00025650437,0.0011281339,0.00013051833,0.0004874263,0.000043351833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020266879,0.00017561384,0.0005220553,0.0002295322,0.00030317632,0.00004291749,0.00010005015,0.000042056632,0.00006920187],"category_scores_gemma":[0.00015175946,0.00014392727,0.00025768843,0.00045759123,0.00015024659,0.00022082424,0.00001196699,0.0002380071,0.000009516453],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007620787,0.00015889922,0.8650842,0.000009224083,0.00021140269,0.0000011742547,0.00027677583,0.0001765075,0.021748934,0.00004793712,0.0014691156,0.110053755],"study_design_scores_gemma":[0.003083483,0.0029310223,0.9623466,0.000046401936,0.000099922785,0.00032337572,0.00077490736,0.000038650986,0.0014288117,0.00001890822,0.02865458,0.0002533395],"about_ca_topic_score_codex":0.0056226193,"about_ca_topic_score_gemma":0.0013883149,"teacher_disagreement_score":0.10980041,"about_ca_system_score_codex":0.00009807332,"about_ca_system_score_gemma":0.00009252423,"threshold_uncertainty_score":0.8499756},"labels":[],"label_agreement":null},{"id":"W2018818408","doi":"10.1016/j.ijid.2014.10.028","title":"Dominance of two genotypes of Bordetella pertussis during a period of increased pertussis activity in Alberta, Canada: January to August 2012","year":2014,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta; University of Alberta Hospital; University of Calgary; Health Canada; Alberta Health","funders":"Alberta Health Services","keywords":"Bordetella pertussis; Multilocus sequence typing; Pulsed-field gel electrophoresis; Pertussis vaccine; Whooping cough; Immunization; Genotype; Veterinary medicine; Epidemiology; Typing; Medicine; Biology; Virology; Microbiology; Vaccination; Immunology; Antibody; Internal medicine; Genetics; Gene","score_opus":0.0038293069606737816,"score_gpt":0.22988245890057932,"score_spread":0.22605315193990552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018818408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997941,0.00046328903,0.00006590501,0.00019079667,0.00089958194,0.00008628072,0.00010740584,0.0000037658363,0.00024193407],"genre_scores_gemma":[0.99964505,0.00010250943,0.000018384688,0.000025707133,0.00010261881,0.0000053127565,0.0000064560636,0.000010094629,0.00008385905],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99890167,0.00016453367,0.000584438,0.00012458491,0.00007723881,0.00014756624],"domain_scores_gemma":[0.9983489,0.00029875577,0.00062540645,0.0001314246,0.00054741185,0.00004810981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013311837,0.00014052438,0.00045609966,0.0003489813,0.0000409063,0.000008059883,0.00022612949,0.00006683579,0.0003855629],"category_scores_gemma":[0.00053151837,0.0001201348,0.00017127478,0.00013777187,0.000072841605,0.0002125079,0.00006937756,0.00012752712,0.0000023712773],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015581669,0.000798115,0.51909757,0.0000642639,0.0005461683,0.000005459821,0.00022107644,0.0003638537,0.47257906,0.0001531021,0.0005541484,0.00405903],"study_design_scores_gemma":[0.002482486,0.00030700085,0.8821745,0.00023180756,0.0000942492,0.0001452682,0.000052803472,0.000009618652,0.11302798,0.000051998926,0.0012855418,0.00013676583],"about_ca_topic_score_codex":0.3077493,"about_ca_topic_score_gemma":0.17591023,"teacher_disagreement_score":0.36307693,"about_ca_system_score_codex":0.00014349808,"about_ca_system_score_gemma":0.0003903881,"threshold_uncertainty_score":0.83912724},"labels":[],"label_agreement":null},{"id":"W2019714388","doi":"10.1016/j.vaccine.2011.07.135","title":"Influence of maternal antibodies on active pertussis toxoid immunization of neonatal mice and piglets","year":2011,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Alberta; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Krembil Foundation; Bill and Melinda Gates Foundation","keywords":"Immunization; Whooping cough; Bordetella pertussis; Toxoid; Immunology; Active immunization; Medicine; Antibody; Pertussis vaccine; Vaccination; Booster dose; Immune system; Pertussis toxin; Biology; Internal medicine","score_opus":0.01024027392387181,"score_gpt":0.22277760280560013,"score_spread":0.21253732888172833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019714388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99919677,0.00031962217,0.000012745997,0.000025192365,0.00013265136,0.000071124174,0.000035331766,0.000013671776,0.000192903],"genre_scores_gemma":[0.9995262,0.00025162793,0.000059143575,0.0000119054675,0.000009645277,0.0000015651713,0.000015394111,0.0000060127973,0.00011850047],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99958324,0.000039298207,0.00018027874,0.00010193855,0.00000796043,0.00008725959],"domain_scores_gemma":[0.9996161,0.00003496156,0.00012815207,0.00011677279,0.000096781165,0.000007272842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000040978524,0.000084104526,0.00017569824,0.000094150375,0.000049115344,0.0000020088046,0.00006676659,0.00008061378,0.00036296988],"category_scores_gemma":[0.000029374667,0.000065635526,0.000023801462,0.00007212046,0.000022206408,0.00010133147,0.00004934255,0.00006331626,0.00001302297],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049672014,0.000060089,0.06940678,0.000022875622,0.00008314731,2.7348378e-7,0.0006320768,0.000004071764,0.9244944,0.0003062872,0.000044140706,0.0044491636],"study_design_scores_gemma":[0.00038311136,0.00019009825,0.50194484,0.000029713372,0.00001447453,0.000016435817,0.00005805592,5.5822414e-7,0.49704966,0.000024892317,0.00025210623,0.000036089546],"about_ca_topic_score_codex":0.00081304647,"about_ca_topic_score_gemma":0.000026392381,"teacher_disagreement_score":0.43253803,"about_ca_system_score_codex":0.000003354456,"about_ca_system_score_gemma":0.000008985784,"threshold_uncertainty_score":0.39742658},"labels":[],"label_agreement":null},{"id":"W2020035138","doi":"10.1186/1742-7622-4-15","title":"Estimating the role of casual contact from the community in transmission of Bordetella pertussis to young infants","year":2007,"lang":"en","type":"article","venue":"Emerging Themes in Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Sanofi Pasteur; Sanofi","keywords":"Casual; Medicine; Transmission (telecommunications); Bordetella pertussis; Pediatrics; Contact tracing; Epidemiology; Demography; Infectious disease (medical specialty); Disease; Biology; Internal medicine; Computer science; Telecommunications; Coronavirus disease 2019 (COVID-19)","score_opus":0.02891247398680504,"score_gpt":0.32909285706720276,"score_spread":0.30018038308039774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020035138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99469966,0.0024368856,0.00096317177,0.0007324724,0.0005175803,0.0001916627,0.000015645544,0.00001299701,0.00042991526],"genre_scores_gemma":[0.998981,0.000059966784,0.00071325817,0.00015527816,0.000039009585,0.0000095241,0.000018395223,0.000009447782,0.0000140931725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967559,0.0019053754,0.0008415081,0.00014970834,0.000013276933,0.00033425327],"domain_scores_gemma":[0.99265873,0.0066542467,0.00024754534,0.00038553734,0.00003953474,0.000014401659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004158902,0.00013768773,0.0005026439,0.00010666096,0.00017441394,0.0000015202618,0.00038105735,0.00019646359,0.00016150928],"category_scores_gemma":[0.0021118387,0.00007911794,0.00008384661,0.00023579753,0.0001423404,0.00003515704,0.00012168945,0.0005543283,0.0000043422433],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000321064,0.00011149412,0.6062442,0.000007722036,0.00006576403,2.9724916e-7,0.011759404,0.000558374,0.3314891,0.00059549493,0.000099201854,0.04874793],"study_design_scores_gemma":[0.0008146294,0.00020296309,0.94555753,0.00020817136,0.00002758557,0.000017472703,0.0051750466,0.00067337666,0.03774144,0.0038775934,0.0055504744,0.00015370574],"about_ca_topic_score_codex":0.03848559,"about_ca_topic_score_gemma":0.005502307,"teacher_disagreement_score":0.33931336,"about_ca_system_score_codex":0.00002485885,"about_ca_system_score_gemma":0.000021136007,"threshold_uncertainty_score":0.9679172},"labels":[],"label_agreement":null},{"id":"W2020045769","doi":"10.1159/000421007","title":"Dexamethasone Therapy of Bacterial Meningitis","year":2015,"lang":"en","type":"review","venue":"Antibiotics and chemotherapy/Antibiotica et chemotherapia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Dexamethasone; Medicine; Meningitis; Bacterial meningitis; Microbiology; Intensive care medicine; Internal medicine; Biology; Pediatrics","score_opus":0.05032207242286359,"score_gpt":0.3311188729390568,"score_spread":0.2807968005161932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020045769","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00780187,0.98809946,0.00003814587,0.00014833201,0.0013178699,0.00094542623,0.00028121067,0.00014648162,0.001221197],"genre_scores_gemma":[0.0047841133,0.9927946,0.000499722,0.00011860103,0.00023782127,0.000001102206,0.0005429649,0.000251944,0.0007691804],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99659383,0.0004454822,0.001259683,0.0009261819,0.00008731846,0.0006874842],"domain_scores_gemma":[0.9975152,0.0003025948,0.0009430722,0.0008717129,0.00026064966,0.00010674007],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00082279637,0.0010845534,0.0034036133,0.00038335446,0.0001578238,0.00012344088,0.00050470285,0.001524435,0.0014136055],"category_scores_gemma":[0.00004746967,0.00085571513,0.00066174957,0.0005074792,0.00053738157,0.00014510828,0.00020027341,0.0007290985,0.00008920646],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014878646,0.00052715576,0.0000437392,0.0016716111,0.0019783617,0.0000021474773,0.00034738838,4.852744e-8,0.022174114,0.0007746634,0.002704714,0.96962726],"study_design_scores_gemma":[0.0027244836,0.00053289055,0.000030395335,0.0023092444,0.00033538378,0.00021291197,0.00004310221,7.8551454e-7,0.019054338,0.00014225462,0.97373354,0.00088063756],"about_ca_topic_score_codex":0.000101953054,"about_ca_topic_score_gemma":0.000010600344,"teacher_disagreement_score":0.97102886,"about_ca_system_score_codex":0.000052035342,"about_ca_system_score_gemma":0.00034357444,"threshold_uncertainty_score":0.9997718},"labels":[],"label_agreement":null},{"id":"W2020504759","doi":"10.1177/197140091002300505","title":"An Atlas of Infectious and Parasitic Diseases of the Central Nervous System","year":2010,"lang":"en","type":"article","venue":"The Neuroradiology Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal General Hospital","funders":"","keywords":"Central nervous system; Presentation (obstetrics); Infectious disease (medical specialty); Work (physics); Geography; Medicine; Biology; Neuroscience; Pathology; Disease; Engineering; Surgery","score_opus":0.00533239830594397,"score_gpt":0.2201573876897839,"score_spread":0.21482498938383993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020504759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99606,0.00025499388,0.000012854221,0.00020266659,0.003300369,0.00008809576,0.00001761192,0.000015060109,0.000048340076],"genre_scores_gemma":[0.9997322,0.000049012513,0.0000020187497,0.000029033174,0.0001612777,0.0000020647458,0.0000017500807,0.000007013725,0.000015656908],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989659,0.000506309,0.00024604346,0.000089649824,0.000010952074,0.00018110349],"domain_scores_gemma":[0.9992869,0.00014894179,0.00023624644,0.00024116316,0.00006042308,0.000026349535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014797546,0.000091826194,0.00021991952,0.00004216891,0.0002911029,0.000010953426,0.00021742014,0.000111961606,0.000040745712],"category_scores_gemma":[0.00006649552,0.000046045127,0.00008079829,0.00006821727,0.00042878886,0.000052702035,0.000028369708,0.0004419588,0.000002798151],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052149768,0.00005196664,0.27231732,0.000009481223,0.0000571593,9.4200766e-7,0.000088600755,0.000013097927,0.72508955,0.0016215583,0.00011534062,0.0005828348],"study_design_scores_gemma":[0.000498642,0.00033823677,0.9752778,0.000011885077,0.000116748044,0.008977173,0.00006062443,0.0000071136715,0.013872212,0.0001764659,0.0006121988,0.000050944822],"about_ca_topic_score_codex":0.000066356864,"about_ca_topic_score_gemma":0.000022498494,"teacher_disagreement_score":0.71121734,"about_ca_system_score_codex":0.0000052978935,"about_ca_system_score_gemma":0.00004193229,"threshold_uncertainty_score":0.22389574},"labels":[],"label_agreement":null},{"id":"W2020948627","doi":"10.1097/01.inf.0000166163.02135.8b","title":"Canadian Experience With Implementation of an Acellular Pertussis Vaccine Booster-Dose Program in Adolescents: Implications for the United States","year":2005,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; Izaak Walton Killam Health Centre","funders":"","keywords":"Diphtheria; Medicine; Booster (rocketry); Immunization; Booster dose; Pertussis vaccine; Tetanus; Immunization program; Environmental health; Pediatrics; Family medicine; Vaccination; Immunology","score_opus":0.010601960808076082,"score_gpt":0.28707973705205114,"score_spread":0.27647777624397507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020948627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960679,0.000574812,0.00020117543,0.0020614746,0.00018706615,0.00079822575,0.00008061172,0.000025393221,0.000003363934],"genre_scores_gemma":[0.9987534,0.00046156236,0.000019942903,0.00015008198,0.0002515612,0.00024943578,0.000083751715,0.000014134326,0.000016126367],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990996,0.00013605738,0.00031389968,0.00012462398,0.000020072794,0.00030570713],"domain_scores_gemma":[0.9992201,0.00007242617,0.00019899482,0.00022053256,0.0001996582,0.000088342946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002170082,0.00012804095,0.00012120716,0.0002780444,0.00064477255,0.00005624423,0.00018103322,0.00004694847,0.00013729018],"category_scores_gemma":[0.000029753908,0.000070803835,0.0000623013,0.00043098783,0.000034293193,0.00018320346,0.000018513507,0.00018670595,0.0000041276035],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022718418,0.00039643055,0.98179954,0.000015604868,0.00006616258,5.1722066e-7,0.0011935408,0.0007447305,0.0007028435,0.000045952464,0.00032682234,0.0144806905],"study_design_scores_gemma":[0.0024942523,0.0004695197,0.9894109,0.000012485556,0.00029189695,0.00014656664,0.0014507963,0.00013919889,0.00014701062,0.0001054337,0.005186653,0.00014528219],"about_ca_topic_score_codex":0.022184227,"about_ca_topic_score_gemma":0.07038452,"teacher_disagreement_score":0.04820029,"about_ca_system_score_codex":0.00012920337,"about_ca_system_score_gemma":0.00027418922,"threshold_uncertainty_score":0.98432714},"labels":[],"label_agreement":null},{"id":"W2021405109","doi":"10.1016/j.biologicals.2013.11.011","title":"Report on the international workshop on alternatives to the murine histamine sensitization test (HIST) for acellular pertussis vaccines: State of the science and the path forward","year":2014,"lang":"en","type":"article","venue":"Biologicals","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); Health Canada","funders":"National Institutes of Health; U.S. Food and Drug Administration; Henan Institute of Science and Technology; National Institute of Environmental Health Sciences; University of Virginia","keywords":"Test (biology); Medicine; Immunology; Biology","score_opus":0.018992041529765327,"score_gpt":0.256287146343748,"score_spread":0.23729510481398267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021405109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9623226,0.00008215293,0.00057098694,0.035193272,0.00079450133,0.0006211504,0.000042399028,0.000013934388,0.0003590275],"genre_scores_gemma":[0.9967047,0.00007796728,0.000019615998,0.000978004,0.00010907796,0.000074211544,0.000015704993,0.0000046034847,0.0020161083],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991479,0.00018270711,0.00024508117,0.00023937224,0.000039957267,0.00014500404],"domain_scores_gemma":[0.9970974,0.0020996057,0.00020665601,0.0003471925,0.00023816628,0.000011006133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015345628,0.00011243977,0.00015822459,0.000036690824,0.00047955778,0.00003639922,0.00037383696,0.00004885794,0.00005279907],"category_scores_gemma":[0.00606066,0.000034950976,0.00006488478,0.00015947048,0.00038594127,0.000026302258,0.00016905797,0.00009814744,0.00000862818],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008601824,0.00022890589,0.0048066783,0.000007852327,0.00013299976,5.000019e-7,0.00051779405,0.0001287496,0.94447184,0.024614187,0.007389145,0.016841153],"study_design_scores_gemma":[0.0029302994,0.0013094957,0.21619935,0.00016925932,0.000086826454,0.000119262,0.00034306472,0.0009434429,0.26098186,0.0043271505,0.5122218,0.00036817088],"about_ca_topic_score_codex":0.000030966356,"about_ca_topic_score_gemma":0.00001787338,"teacher_disagreement_score":0.68349,"about_ca_system_score_codex":0.000026833657,"about_ca_system_score_gemma":0.00002080005,"threshold_uncertainty_score":0.7255614},"labels":[],"label_agreement":null},{"id":"W2021569328","doi":"10.1097/01.inf.0000160919.94330.1a","title":"Pertussis Immunization in the Global Pertussis Initiative North American Region","year":2005,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Dalhousie University","funders":"","keywords":"Medicine; Immunization; Herd immunity; Pediatrics; Population; Diphtheria; Immunity; Incidence (geometry); Immunology; Vaccination; Environmental health; Antibody; Immune system","score_opus":0.029184572647552438,"score_gpt":0.29908312401739634,"score_spread":0.2698985513698439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021569328","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027348202,0.96943855,0.0000534035,0.00040590568,0.001498034,0.0006882408,0.00012414173,0.000065913,0.00037758355],"genre_scores_gemma":[0.05033364,0.9468691,0.0000021014403,0.00021844095,0.0022220165,0.000115527095,0.00014300607,0.000037422215,0.00005875945],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956751,0.00253454,0.00087568955,0.00031362876,0.00007075128,0.0005302943],"domain_scores_gemma":[0.9975066,0.0005746033,0.0011581036,0.000517646,0.0001681698,0.00007485093],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00049180293,0.0005349137,0.0009708669,0.0003847069,0.0011391656,0.00019232625,0.0006502271,0.00021030537,0.0001729563],"category_scores_gemma":[0.0003941842,0.00027206255,0.000730004,0.002066723,0.00018431494,0.00020806045,0.00012148776,0.0014452116,0.00023443648],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096423995,0.0006986689,0.113501154,0.0004041126,0.00055699714,0.000034650802,0.0005328364,0.000027647206,6.818863e-8,0.000104903294,0.006475208,0.87756735],"study_design_scores_gemma":[0.00071557926,0.00022246454,0.0803863,0.0002822074,0.004439645,0.004636997,0.00018011646,0.0000019804847,1.4586557e-8,0.00009788363,0.9084719,0.00056490704],"about_ca_topic_score_codex":0.00021150206,"about_ca_topic_score_gemma":0.000362064,"teacher_disagreement_score":0.9019967,"about_ca_system_score_codex":0.0005022482,"about_ca_system_score_gemma":0.0007406933,"threshold_uncertainty_score":0.9999732},"labels":[],"label_agreement":null},{"id":"W2022680060","doi":"10.1017/s0266462304001096","title":"Assessing the economics of vaccination for<i>Neisseria meningitidis</i>in industrialized nations: A review and recommendations for further research","year":2004,"lang":"en","type":"review","venue":"International Journal of Technology Assessment in Health Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Government of Nova Scotia","funders":"","keywords":"Developed country; Vaccination; Political science; Economic growth; Regional science; Public economics; Economics; Medicine; Environmental health; Sociology; Virology; Population","score_opus":0.133297437395999,"score_gpt":0.5261541703640221,"score_spread":0.39285673296802315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022680060","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002911971,0.9732701,0.00018696948,0.022389112,0.0015327624,0.002116356,0.00018503255,0.000008797068,0.000019632587],"genre_scores_gemma":[0.003295584,0.9941188,0.0016659066,0.00004534223,0.000073027535,0.00043448101,0.0003281129,0.000023242634,0.000015470185],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99713576,0.00048727865,0.0018846297,0.0002226956,0.000035276033,0.00023438032],"domain_scores_gemma":[0.9957857,0.0011549392,0.0019018444,0.0001729582,0.00096997526,0.000014587491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029792332,0.0001851409,0.0011101877,0.0020358984,0.00016929084,0.00004629269,0.00051221956,0.0004893165,0.000050213406],"category_scores_gemma":[0.00072762056,0.00014274158,0.00020325108,0.00046615623,0.000069984,0.00022360966,0.000102994105,0.0009765631,5.373843e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041388008,0.00020456385,0.000115028575,0.01160865,0.0005135194,5.321124e-7,0.00024643439,0.000008624962,0.000013801203,0.026055226,0.00070471584,0.96048754],"study_design_scores_gemma":[0.0023293158,0.00040495733,0.00006628856,0.033475388,0.00018336007,0.00018571911,0.0022961814,0.0000012720402,0.000017029342,0.0027974108,0.9581032,0.00013990821],"about_ca_topic_score_codex":0.00006478588,"about_ca_topic_score_gemma":0.00015305543,"teacher_disagreement_score":0.9603476,"about_ca_system_score_codex":0.0011440613,"about_ca_system_score_gemma":0.0018892731,"threshold_uncertainty_score":0.5820833},"labels":[],"label_agreement":null},{"id":"W2023283711","doi":"10.1371/journal.pone.0050659","title":"The Changing Epidemiology of Meningococcal Disease in Quebec, Canada, 1991–2011: Potential Implications of Emergence of New Strains","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministère de la Santé et des Services Sociaux (Québec); Public Health Agency of Canada; Université Laval; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec","funders":"Sanofi Pasteur; Sanofi; Pfizer","keywords":"Multilocus sequence typing; Epidemiology; Neisseria meningitidis; Meningococcal disease; Carriage; Molecular epidemiology; Meningococcal vaccine; Incidence (geometry); Vaccination; Conjugate vaccine; Medicine; Typing; Virology; Biology; Demography; Immunization; Genotype; Immunology; Microbiology; Internal medicine; Genetics; Antigen","score_opus":0.04570932394719576,"score_gpt":0.26426876213006295,"score_spread":0.2185594381828672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023283711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963655,0.0019974592,0.000070672235,0.0011242476,0.0001950651,0.00013692303,0.0000735089,0.0000047402336,0.00003190009],"genre_scores_gemma":[0.9991101,0.00014568298,0.000050144,0.0000130928975,0.000049966486,0.00001452241,0.00004736434,0.0000046181062,0.00056451565],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99917793,0.00012214057,0.0003645575,0.0000800559,0.000011131963,0.00024420838],"domain_scores_gemma":[0.99938565,0.00013272032,0.00019705176,0.00019309562,0.00005932385,0.000032126183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021253052,0.000065216605,0.00023720838,0.00006039028,0.00006336535,4.4310346e-7,0.00011292728,0.000060489474,0.00039531846],"category_scores_gemma":[0.00017850766,0.00005037476,0.000041417356,0.0000979378,0.00007995919,0.00004298345,0.00004769445,0.00007939012,0.0000031983266],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005717869,0.00043811378,0.28939295,0.000029389146,0.00019168196,3.7370555e-8,0.0002808848,0.000010778665,0.7048052,0.003222687,0.00089870044,0.0006724331],"study_design_scores_gemma":[0.00025041663,0.00002770753,0.969161,0.00003380874,0.00007046657,5.985601e-7,0.00015816122,0.000006500556,0.029685734,0.00014871715,0.00039653413,0.00006039956],"about_ca_topic_score_codex":0.56801856,"about_ca_topic_score_gemma":0.5245636,"teacher_disagreement_score":0.679768,"about_ca_system_score_codex":0.000015072741,"about_ca_system_score_gemma":0.00014360435,"threshold_uncertainty_score":0.48411185},"labels":[],"label_agreement":null},{"id":"W2023689158","doi":"10.1016/j.vaccine.2013.09.034","title":"Evaluation of serogroup C and ACWY meningococcal vaccine programs: Projected impact on disease burden according to a stochastic two-strain dynamic model","year":2013,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo; Université Laval; University of Guelph; University of Saskatchewan","funders":"GlaxoSmithKline; Abbott Laboratories","keywords":"Medicine; Vaccination; Meningococcal disease; Neisseria meningitidis; Herd immunity; Meningococcal vaccine; Carriage; Immunization; Population; Incidence (geometry); Pediatrics; Immunology; Virology; Environmental health; Antigen; Biology","score_opus":0.024036432649860173,"score_gpt":0.3160104747733796,"score_spread":0.29197404212351946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023689158","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959019,0.00023238969,0.0010124866,0.00042424924,0.00017519438,0.002058742,0.00007003246,0.000103697545,0.000021302882],"genre_scores_gemma":[0.9990647,0.0000061035744,0.00015798639,0.000021220412,0.000059628936,0.00031732072,0.00024724167,0.000030923828,0.00009487655],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9986012,0.000190432,0.00038132357,0.00039182205,0.00006243484,0.00037275965],"domain_scores_gemma":[0.99893266,0.000063550135,0.0001489337,0.00031968972,0.0004388192,0.00009634586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005089877,0.00028468587,0.00038401465,0.00028401896,0.00012834975,0.000043670447,0.00012963486,0.00011989194,0.00037448356],"category_scores_gemma":[0.00020312295,0.00021197063,0.00008820782,0.00032554395,0.000009048307,0.00019427296,0.00009638332,0.00017704342,0.000069744565],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011511599,0.00038625216,0.0051172916,0.000038359296,0.00038053532,3.6039125e-7,0.00041018304,0.014496691,0.88576096,0.00007439979,0.00020928902,0.09197451],"study_design_scores_gemma":[0.01913568,0.003987846,0.45162177,0.00053048186,0.0014698833,0.00007721518,0.0007999966,0.516657,0.0028956663,0.0016737015,0.00007259737,0.0010781459],"about_ca_topic_score_codex":0.00062488706,"about_ca_topic_score_gemma":0.00007362243,"teacher_disagreement_score":0.8828653,"about_ca_system_score_codex":0.00011284717,"about_ca_system_score_gemma":0.0001159976,"threshold_uncertainty_score":0.86439115},"labels":[],"label_agreement":null},{"id":"W2023750497","doi":"10.1016/s1474-4422(12)70184-9","title":"The burden of serogroup B meningococcal disease","year":2012,"lang":"en","type":"letter","venue":"The Lancet Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Neisseria meningitidis; Meningitis; Meningococcal disease; Medicine; Scopus; Disease; Pediatrics; MEDLINE; Internal medicine; Biology","score_opus":0.025284717542966188,"score_gpt":0.25291371432708804,"score_spread":0.22762899678412185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023750497","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11681599,0.0033382205,0.0000030783626,0.8735223,0.005287474,0.00029500437,0.000110043555,0.00007275141,0.00055512745],"genre_scores_gemma":[0.52171683,0.0012255897,0.0000039120605,0.43036428,0.0370288,0.00027731975,0.00067321793,0.00012533835,0.0085846735],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980168,0.00082443847,0.00029239836,0.0002285984,0.000018947763,0.0006188457],"domain_scores_gemma":[0.99806625,0.0007543053,0.0002592333,0.00085673924,0.000049182818,0.000014310505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030245786,0.00023596564,0.00048621366,0.000040490926,0.00032639655,0.000016713495,0.00071342423,0.00061881327,0.0004247282],"category_scores_gemma":[0.00006899505,0.00011982165,0.00015610129,0.000075281736,0.00046196542,0.000029492423,0.0002308411,0.0018543703,0.00034838723],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003928904,0.000014055001,0.00048955885,0.00002322904,0.00019031006,0.0000055253277,0.000077935525,0.0000034378352,0.0059200283,0.00039330224,0.9917533,0.000736447],"study_design_scores_gemma":[0.00040093518,0.00011724353,0.0027842033,0.000005780878,0.00013990549,0.0000954972,0.0000033616088,0.0000017739729,0.00015467632,0.00030637105,0.9958766,0.00011361578],"about_ca_topic_score_codex":0.00018344213,"about_ca_topic_score_gemma":0.00000805637,"teacher_disagreement_score":0.44315803,"about_ca_system_score_codex":0.0000052574846,"about_ca_system_score_gemma":0.00003212342,"threshold_uncertainty_score":0.80564195},"labels":[],"label_agreement":null},{"id":"W2024080232","doi":"10.1016/j.biologicals.2013.03.003","title":"Serogroup quantitation of multivalent polysaccharide and polysaccharide-conjugate meningococcal vaccines from China","year":2013,"lang":"en","type":"article","venue":"Biologicals","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Health Canada","keywords":"Polysaccharide; Conjugate; Microbiology; Neisseria meningitidis; Meningococcal vaccine; Conjugate vaccine; Meningococcal meningitis; Virology; Chemistry; Biology; Bacteria; Antibiotics; Biochemistry; Streptococcus pneumoniae","score_opus":0.016801315187519855,"score_gpt":0.24621596020069636,"score_spread":0.22941464501317652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024080232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967999,0.0016504329,0.00011361728,0.00038063986,0.000507384,0.00033441986,0.00006861133,0.00008736189,0.000057625468],"genre_scores_gemma":[0.9989927,0.00029446767,0.00028494193,0.000038114384,0.00006596676,0.000056990353,0.000063825515,0.000008988292,0.00019401015],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988511,0.00016712912,0.00040999067,0.00031722934,0.000012604108,0.00024195193],"domain_scores_gemma":[0.9993112,0.00020417255,0.00019563537,0.00018325078,0.00007414976,0.00003160874],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001410877,0.00018940319,0.00037741353,0.00007680542,0.00012007602,0.000026237216,0.00012380186,0.00027571476,0.0025017867],"category_scores_gemma":[0.0001379834,0.00012603228,0.00008159963,0.000093722985,0.000096331016,0.00014987744,0.00010604203,0.00012755566,0.00022823543],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060884802,0.00008841946,0.07259496,0.0000055371797,0.00009202006,1.6750282e-7,0.000098198856,4.5508372e-7,0.92056155,0.00057771907,0.0002558548,0.0056642117],"study_design_scores_gemma":[0.00076880585,0.00030274325,0.77117896,0.000022146753,0.00003243568,0.000008900305,0.00011295443,0.000011582147,0.22564025,0.0009873454,0.00076719053,0.00016667173],"about_ca_topic_score_codex":0.0043484624,"about_ca_topic_score_gemma":0.000030330595,"teacher_disagreement_score":0.698584,"about_ca_system_score_codex":0.00000880463,"about_ca_system_score_gemma":0.000008748586,"threshold_uncertainty_score":0.99841005},"labels":[],"label_agreement":null},{"id":"W2024264416","doi":"10.1097/inf.0b013e3181a9cc2a","title":"Cellular Immunity as a Potential Cause of Local Reactions to Booster Vaccination With Diphtheria and Tetanus Toxoids and Acellular Pertussis Antigens","year":2009,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Sanofi Pasteur","keywords":"Pertactin; Toxoid; Immunology; Filamentous haemagglutinin adhesin; Tetanus; Medicine; Diphtheria; Booster dose; Antigen; Whooping cough; Pertussis vaccine; Vaccination; Immunity; Pertussis toxin; Antibody; Immunization; Immune system; Internal medicine","score_opus":0.005636471902118691,"score_gpt":0.21893716894850973,"score_spread":0.21330069704639104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024264416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948445,0.0018349709,0.0019852438,0.0005485156,0.00039369395,0.0002403803,0.000017714448,0.000029351844,0.000105652514],"genre_scores_gemma":[0.9984906,0.0009793766,0.000014435696,0.00007116728,0.0002427156,0.000006054314,0.000010065648,0.000012939718,0.00017268563],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990089,0.00024737619,0.00029601966,0.00016534782,0.000041123116,0.00024125037],"domain_scores_gemma":[0.99924874,0.000065137385,0.00019267475,0.0002059316,0.00017376766,0.00011374589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002665165,0.00018393983,0.0002187675,0.0002163385,0.0007270286,0.00007086594,0.00008419753,0.00010396507,0.00036351173],"category_scores_gemma":[0.000060118142,0.00011927061,0.00007541386,0.00023745783,0.000061667786,0.00017219607,0.000048109905,0.00033981507,0.00001441261],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004439946,0.00230649,0.29217637,0.00014081725,0.0012665062,0.0001246606,0.0037647008,0.00068711804,0.66443783,0.00053760485,0.001799436,0.028318506],"study_design_scores_gemma":[0.0038257085,0.0026739857,0.9744136,0.00003695314,0.0020851642,0.0061076884,0.00085692917,0.00004532333,0.0065274048,0.0011620034,0.0017224181,0.0005428306],"about_ca_topic_score_codex":0.00016033209,"about_ca_topic_score_gemma":0.000015476375,"teacher_disagreement_score":0.6822372,"about_ca_system_score_codex":0.000038149363,"about_ca_system_score_gemma":0.00009637103,"threshold_uncertainty_score":0.55917895},"labels":[],"label_agreement":null},{"id":"W2024309140","doi":"10.1128/aem.68.9.4253-4258.2002","title":"Purification and Immunogenicity of a Recombinant<i>Bordetella pertussis</i>S1S3FHA Fusion Protein Expressed by<i>Streptococcus gordonii</i>","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Medical Research Council; IWK Health Centre","keywords":"Bordetella pertussis; Immunogenicity; Fusion protein; Filamentous haemagglutinin adhesin; Microbiology; Biology; Monoclonal antibody; Pertussis toxin; Polyclonal antibodies; Virology; Protein subunit; Protein A/G; Molecular biology; Titer; Antibody; Pertactin; Recombinant DNA; G protein; Biochemistry; Bacteria; Virus; Immunology; Receptor","score_opus":0.0055279446112270125,"score_gpt":0.16506275189991904,"score_spread":0.15953480728869202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024309140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99485683,0.0038681806,0.000017345938,0.000137564,0.00016539682,0.00050529494,0.00014517938,0.000028036231,0.00027615178],"genre_scores_gemma":[0.99655694,0.0021312744,0.000044923025,0.0000500074,0.000012605786,0.00009113789,0.00035693386,0.000016152151,0.00074000104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989158,0.00008333306,0.0003355535,0.0003989371,0.0000076668475,0.00025873017],"domain_scores_gemma":[0.99954385,0.000040755694,0.00016421765,0.00022127679,0.000004732677,0.000025151241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000087501845,0.00021836208,0.00031385387,0.000051083913,0.0002028016,0.000009717582,0.00009566099,0.00030753965,0.00084773905],"category_scores_gemma":[0.0000042134316,0.00019014534,0.000047356894,0.000046650468,0.00037927896,0.000046609006,0.00013219545,0.0001590222,0.000068126734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006498383,0.0002687356,0.001249393,0.000016410557,0.00005611587,1.4389565e-7,0.00014792656,1.2992669e-7,0.9849289,0.0000662053,0.0009964777,0.0122045735],"study_design_scores_gemma":[0.0016576052,0.00023570366,0.0032409974,0.000013523109,0.000034602093,0.00004669829,0.00015998005,0.0000020012847,0.90612876,0.000056026558,0.08819483,0.00022924601],"about_ca_topic_score_codex":0.000060347073,"about_ca_topic_score_gemma":0.0000031440916,"teacher_disagreement_score":0.087198354,"about_ca_system_score_codex":0.000020147898,"about_ca_system_score_gemma":0.0000029513321,"threshold_uncertainty_score":0.9282148},"labels":[],"label_agreement":null},{"id":"W2024469556","doi":"10.1016/s1473-3099(02)00452-8","title":"Pertussis of adults and infants","year":2002,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":462,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Bordetella pertussis; Medicine; Vaccination; Pediatrics; Whooping cough; Transmission (telecommunications); Booster dose; Pertussis vaccine; Immunology; Immunization; Antibody","score_opus":0.03139739542491934,"score_gpt":0.2916105126784138,"score_spread":0.2602131172534945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024469556","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045665945,0.99286395,8.1407734e-7,0.000015934644,0.00071576616,0.00036750062,0.00046192916,0.000118150354,0.000889376],"genre_scores_gemma":[0.007230464,0.9920115,7.624792e-7,0.000026495436,0.00026870926,0.000091037706,0.00011089906,0.00002497084,0.00023515822],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989086,0.00026646283,0.00034260398,0.00022983388,0.0000130243,0.00023952266],"domain_scores_gemma":[0.99889743,0.0003150718,0.00029095466,0.00043062586,0.000044592463,0.00002130036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000070918126,0.0002791352,0.0013515363,0.00010512619,0.0001781929,0.000021767615,0.00018013144,0.00024186724,0.0007202865],"category_scores_gemma":[0.00012043873,0.00015713053,0.00026691507,0.00017698487,0.00017382922,0.00004793618,0.000112852875,0.00024196836,0.0001537999],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027596372,0.00014912125,0.0014244751,0.0039772284,0.0005861065,5.8177073e-7,0.000067271554,7.507229e-8,0.000007664291,0.00020682267,0.004378174,0.9891749],"study_design_scores_gemma":[0.0005435677,0.000100352416,0.0011473139,0.0025730315,0.0010794457,0.00014244155,0.000008085532,1.6909286e-7,0.0000029516389,0.000048536836,0.9941598,0.00019426807],"about_ca_topic_score_codex":0.00009930793,"about_ca_topic_score_gemma":0.000015712716,"teacher_disagreement_score":0.9897817,"about_ca_system_score_codex":0.000017207065,"about_ca_system_score_gemma":0.000036120175,"threshold_uncertainty_score":0.7886632},"labels":[],"label_agreement":null},{"id":"W2024874630","doi":"10.1016/j.vaccine.2006.03.051","title":"Intranasal immunization of mice with recombinant lipidated P2086 protein reduces nasal colonization of group B Neisseria meningitidis","year":2006,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Neisseria meningitidis; Immunization; Meningococcal vaccine; Microbiology; Nasal administration; Antibody; Vaccination; Immune system; Meningitis; Cholera toxin; Immunology; Medicine; Virology; Biology; Bacteria","score_opus":0.004800709644803879,"score_gpt":0.20047284924554662,"score_spread":0.19567213960074273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024874630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981775,0.00029731696,0.00047283276,0.00015908659,0.0003837996,0.00035202387,0.000018320541,0.0000513969,0.00008769374],"genre_scores_gemma":[0.99852407,0.00003116688,0.00030668412,0.000002660765,0.00004221667,0.000013917794,0.00067790545,0.000019635281,0.0003817152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913013,0.000108674234,0.00042109514,0.0001680186,0.000013767254,0.00015830122],"domain_scores_gemma":[0.9992431,0.000027826782,0.00032359202,0.0001650242,0.00023189688,0.0000085664515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012363415,0.00013814752,0.00029149218,0.00014065571,0.00009157416,0.000008646773,0.000100832476,0.00014513862,0.0002910503],"category_scores_gemma":[0.00002349663,0.00011033185,0.00003378488,0.0004577924,0.000022544355,0.00014192367,0.000027544149,0.00008867144,0.000006376526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007175411,0.00029707243,0.0058403616,0.00003460975,0.00008216734,1.806239e-7,0.000061420185,0.00003492589,0.99071586,0.0013535796,0.00041263207,0.00044962415],"study_design_scores_gemma":[0.002342067,0.0009500755,0.053869836,0.00011254806,0.000056761673,0.000022599841,0.00005816563,0.000016709646,0.94047195,0.00008174668,0.0018814644,0.0001360959],"about_ca_topic_score_codex":0.0015879025,"about_ca_topic_score_gemma":0.00026155997,"teacher_disagreement_score":0.050243955,"about_ca_system_score_codex":0.000017430802,"about_ca_system_score_gemma":0.00003354561,"threshold_uncertainty_score":0.4499202},"labels":[],"label_agreement":null},{"id":"W2025178108","doi":"10.1038/nrmicro886","title":"The Bordetellae: lessons from genomics","year":2004,"lang":"en","type":"review","venue":"Nature Reviews Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Bordetella; Biology; Bordetella bronchiseptica; Bordetella pertussis; Genomics; Genome; Comparative genomics; Host (biology); Computational biology; Genetics; Bacteria; Gene","score_opus":0.03185754179372619,"score_gpt":0.3413797836538514,"score_spread":0.3095222418601252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025178108","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008154827,0.98751235,0.000008289456,0.00024101329,0.009214025,0.0016541651,0.0009955984,0.000092905284,0.00027352376],"genre_scores_gemma":[0.0000029747482,0.9926286,0.00008319054,0.00012946346,0.00055893976,0.00022738146,0.0043114056,0.000090252535,0.00196782],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953645,0.0014096993,0.0014813395,0.000953525,0.000008513483,0.0007824256],"domain_scores_gemma":[0.99660313,0.00082045037,0.0011235221,0.0013230884,0.0000916432,0.000038153663],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00066668255,0.0009510785,0.003517047,0.00014435183,0.000716696,0.000072681214,0.0012233715,0.0046425653,0.0006888633],"category_scores_gemma":[0.00021847557,0.000517515,0.0014779376,0.00036076564,0.0003507582,0.00004363799,0.00036392844,0.003719232,0.0060863476],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010459976,0.00004760778,3.304995e-7,0.001452032,0.00063424197,0.0000018380985,0.000012449416,2.6672508e-8,0.0040943497,0.0010329081,0.022018591,0.97069514],"study_design_scores_gemma":[0.0002910195,0.000050905903,6.400833e-7,0.004694656,0.0010910787,0.0006707489,0.0000032718508,2.8478608e-9,0.00009911655,0.00014095729,0.99241954,0.0005380377],"about_ca_topic_score_codex":0.00009484017,"about_ca_topic_score_gemma":0.00019383419,"teacher_disagreement_score":0.970401,"about_ca_system_score_codex":0.00032624806,"about_ca_system_score_gemma":0.00053051533,"threshold_uncertainty_score":0.99972767},"labels":[],"label_agreement":null},{"id":"W2025249465","doi":"10.3402/ijch.v72i0.21142","title":"The epidemiology of invasive disease due to<i>Haemophilus influenzae</i>serotype a in the Canadian North from 2000 to 2010","year":2013,"lang":"en","type":"article","venue":"International Journal of Circumpolar Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Goddard Space Flight Center","keywords":"Incidence (geometry); Epidemiology; Medicine; Population; Disease surveillance; Serotype; Haemophilus influenzae; Demography; Case fatality rate; Meningitis; Pneumonia; Public health; Pediatrics; Environmental health; Internal medicine; Pathology; Immunology; Biology","score_opus":0.028450767558649222,"score_gpt":0.2998754351913758,"score_spread":0.2714246676327266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025249465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9299568,0.0019638552,0.000040087485,0.06521821,0.002330489,0.00031020565,0.0001478013,0.000002713358,0.000029860343],"genre_scores_gemma":[0.98770523,0.00018040862,0.000046956076,0.011733569,0.00025087324,0.00001684857,0.00002919255,0.000006997813,0.000029930237],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981574,0.0005975351,0.0007736824,0.00012075353,0.00005335747,0.0002973108],"domain_scores_gemma":[0.99782455,0.0008804324,0.00040792307,0.00020820364,0.00049740303,0.00018146675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008877009,0.000109007175,0.00029622522,0.00028082996,0.00018518277,0.0000236259,0.0006760595,0.00008232632,0.0002095224],"category_scores_gemma":[0.0015659381,0.000066868495,0.00009308078,0.0001625435,0.00006261701,0.00012555366,0.00004453128,0.00039729627,0.00018501664],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048168786,0.0001747134,0.9259254,0.000009487462,0.00032863792,0.000023795763,0.0037183438,0.00027790657,0.0034922215,0.0018379891,0.052051146,0.011678707],"study_design_scores_gemma":[0.00038821873,0.00017146995,0.9548943,0.000059258855,0.0000076407605,0.00009788549,0.000118677,0.0000011696059,0.000060421276,0.0018343346,0.042305257,0.000061381295],"about_ca_topic_score_codex":0.36089292,"about_ca_topic_score_gemma":0.51809776,"teacher_disagreement_score":0.1572048,"about_ca_system_score_codex":0.00025926405,"about_ca_system_score_gemma":0.0016747692,"threshold_uncertainty_score":0.64336294},"labels":[],"label_agreement":null},{"id":"W2025624184","doi":"10.1016/j.vaccine.2015.01.057","title":"A native outer membrane vesicle vaccine confers protection against meningococcal colonization in human CEACAM1 transgenic mice","year":2015,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Alberta Heritage Foundation for Medical Research","keywords":"Microbiology; Neisseria meningitidis; Bacterial outer membrane; Biology; Colonization; Genetically modified mouse; Mutant; Nasal administration; Heterologous; Meningococcal vaccine; Antibody; Virology; Bacteria; Transgene; Titer; Immunology; Gene; Escherichia coli; Biochemistry","score_opus":0.02662101624645723,"score_gpt":0.26150536074626035,"score_spread":0.2348843444998031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025624184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962536,0.0001750531,0.0004186128,0.0007863957,0.0009478266,0.00075372437,0.000015214627,0.00013811848,0.0005114728],"genre_scores_gemma":[0.9984455,0.000022841092,0.00003299076,0.000095333344,0.00016089137,0.000078326295,0.00021776873,0.000028847573,0.0009174925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862915,0.00023777103,0.0004362515,0.0003462359,0.000025629193,0.00032493522],"domain_scores_gemma":[0.9994008,0.00002995567,0.00013693314,0.00019010036,0.00019698206,0.00004521742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032721358,0.00022618545,0.00035095314,0.00027817505,0.0001607797,0.00002696604,0.00012990953,0.00027625833,0.00031672738],"category_scores_gemma":[0.000068719986,0.00020626793,0.00006467316,0.0004488601,0.000011092351,0.00024478036,0.000038892438,0.00031623032,0.000120882214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057649676,0.00024619134,0.003672462,0.000017901866,0.00009308652,0.000001664791,0.0011160051,0.000099325734,0.99173206,0.00024403419,0.0011822073,0.0010185502],"study_design_scores_gemma":[0.02075787,0.0013539733,0.035337903,0.000094706964,0.000097447104,0.000088948975,0.0006937062,0.00020856108,0.88557816,0.00018049244,0.054985818,0.00062244077],"about_ca_topic_score_codex":0.000700552,"about_ca_topic_score_gemma":0.0012006306,"teacher_disagreement_score":0.10615394,"about_ca_system_score_codex":0.00013217295,"about_ca_system_score_gemma":0.00006040393,"threshold_uncertainty_score":0.8411362},"labels":[],"label_agreement":null},{"id":"W2026232375","doi":"10.1371/journal.ppat.1002151","title":"Transformation of Natural Genetic Variation into Haemophilus Influenzae Genomes","year":2011,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Genome; Biology; Genetics; Recombination; Haemophilus influenzae; Transformation (genetics); DNA; Chromosome; Bacterial genome size; Gene; Bacteria","score_opus":0.021082096231779455,"score_gpt":0.22261820663241072,"score_spread":0.20153611040063127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026232375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974283,0.00080385513,0.00023531537,0.000020953936,0.00054694765,0.00017124668,0.000026813697,0.000048354395,0.00071822305],"genre_scores_gemma":[0.9990937,0.00007216702,0.0006388752,0.000022497603,0.000033649387,0.000016758044,0.000052918393,0.000009217526,0.00006021971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99940425,0.00006692436,0.0002676604,0.00011658935,0.000012280589,0.00013231978],"domain_scores_gemma":[0.9996275,0.000017130997,0.0000987323,0.00014897357,0.000097023345,0.000010671958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058829602,0.0000976267,0.0001573523,0.00010427014,0.0000915119,0.0000043152195,0.000078226505,0.00012765484,0.0005077543],"category_scores_gemma":[0.000018135574,0.00008492359,0.00006336727,0.00010581146,0.000036449987,0.00011290461,0.000016861644,0.00008636397,0.00014036655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005530739,0.00010785104,0.0034180274,0.000026001218,0.0000994922,3.2398466e-7,0.005064113,0.0000017576552,0.98543096,0.0005990578,0.000012611277,0.00518451],"study_design_scores_gemma":[0.00089541735,0.00025847988,0.47153765,0.000021444437,0.00015683506,0.00003466066,0.00013559498,0.000033846045,0.52380455,0.000921987,0.0019926208,0.00020692857],"about_ca_topic_score_codex":0.000120400786,"about_ca_topic_score_gemma":0.000030933563,"teacher_disagreement_score":0.46811962,"about_ca_system_score_codex":0.000016114589,"about_ca_system_score_gemma":0.000020085437,"threshold_uncertainty_score":0.55595535},"labels":[],"label_agreement":null},{"id":"W2026369874","doi":"10.1016/s0992-5945(11)70722-x","title":"Demande d’AMM pour Bexsero®, un vaccin contre le méningocoque B","year":2011,"lang":"fr","type":"article","venue":"Option/Bio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"World Federation of Science Journalists","funders":"","keywords":"Medicine","score_opus":0.022616223039087786,"score_gpt":0.22762019452496424,"score_spread":0.20500397148587646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026369874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95177037,0.011382686,0.0026092848,0.0055396454,0.007938189,0.0004982858,0.00011506344,0.00020724686,0.019939259],"genre_scores_gemma":[0.9034435,0.00143058,0.0009633801,0.0002774316,0.0005789322,0.0000558691,0.00013968113,0.00004940691,0.09306121],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980718,0.00034687726,0.000492866,0.00046123337,0.00001777917,0.0006094284],"domain_scores_gemma":[0.99897337,0.00008944417,0.00022900007,0.00042887352,0.00020104685,0.00007826314],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002785118,0.0003574156,0.00045086577,0.00013753079,0.00056150445,0.00004749231,0.0002410064,0.0007875046,0.01787827],"category_scores_gemma":[0.00005923807,0.00035852104,0.00022476245,0.00019847964,0.00015351847,0.00031184463,0.0001288254,0.0004452842,0.0052643307],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009797168,0.003447175,0.050151747,0.00018401426,0.002151375,0.00004160307,0.0030471117,0.000013711663,0.55128795,0.23730019,0.06602403,0.085371405],"study_design_scores_gemma":[0.0054272176,0.0006032094,0.14985895,0.00021738646,0.00039469588,0.00075443246,0.0009041137,0.000024574078,0.13772291,0.0052131535,0.697984,0.0008953481],"about_ca_topic_score_codex":0.0044282842,"about_ca_topic_score_gemma":0.0007547317,"teacher_disagreement_score":0.63196,"about_ca_system_score_codex":0.000065529945,"about_ca_system_score_gemma":0.00016866116,"threshold_uncertainty_score":0.9998867},"labels":[],"label_agreement":null},{"id":"W2027485436","doi":"10.1016/j.ijid.2012.12.015","title":"Genetic analysis of Bordetella pertussis in Ontario, Canada reveals one predominant clone","year":2013,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Canadian Science Centre for Human and Animal Health","funders":"Rijksinstituut voor Volksgezondheid en Milieu; Public Health Agency of Canada","keywords":"Bordetella pertussis; Pulsed-field gel electrophoresis; Pertactin; Genotype; Biology; Virulence; clone (Java method); Pertussis toxin; Microbiology; Serotype; Virology; Whooping cough; Genetics; Gene; Bacteria; Vaccination; G protein","score_opus":0.0060226882561973056,"score_gpt":0.21944173740131748,"score_spread":0.21341904914512017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027485436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976024,0.0006643541,0.000045439745,0.00015322583,0.0012035916,0.00008852926,0.000052678115,0.000004920047,0.00018488408],"genre_scores_gemma":[0.9994411,0.00013323271,0.00002373042,0.00005984614,0.000059712707,0.000008844723,0.000023903847,0.0000065458316,0.00024311918],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998922,0.000094410614,0.00066805485,0.00010968772,0.00006609292,0.00013977563],"domain_scores_gemma":[0.998557,0.00014613799,0.0004710921,0.00010960736,0.00067784335,0.000038327173],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007380813,0.000111620655,0.00040683945,0.0005682225,0.000033595414,0.000024160667,0.00019642287,0.00006636917,0.006852956],"category_scores_gemma":[0.0001585917,0.000093729905,0.00020691392,0.00023295986,0.000042027354,0.0001209846,0.000040859035,0.00015156061,0.000009580404],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011052132,0.00048197014,0.9468859,0.0000049294786,0.0032203945,0.000011065447,0.00010541592,0.00057427393,0.045031868,0.000033968106,0.0015443836,0.001995323],"study_design_scores_gemma":[0.0009279402,0.00013335951,0.9954998,0.00004979737,0.0005354877,0.00008285368,0.00004816873,0.00001090833,0.0013327237,0.00013534882,0.001149826,0.00009378416],"about_ca_topic_score_codex":0.8900838,"about_ca_topic_score_gemma":0.8961037,"teacher_disagreement_score":0.048613913,"about_ca_system_score_codex":0.00034878016,"about_ca_system_score_gemma":0.000491116,"threshold_uncertainty_score":0.9940549},"labels":[],"label_agreement":null},{"id":"W2027531878","doi":"10.1586/erv.10.147","title":"Menveo<sup>®</sup>: a novel quadrivalent meningococcal CRM<sub>197</sub>conjugate vaccine against serogroups A, C, W-135 and Y","year":2010,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunogenicity; Meningococcal disease; Conjugate vaccine; Tolerability; Neisseria meningitidis; Medicine; Meningococcal vaccine; Population; Immunology; Immune system; Virology; Immunization; Adverse effect; Internal medicine; Biology; Environmental health","score_opus":0.024355036479702278,"score_gpt":0.31417639249434864,"score_spread":0.28982135601464637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027531878","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033320521,0.99129796,0.000026769603,0.00040268665,0.0018663235,0.002491995,0.00021344368,0.00017908425,0.00018970005],"genre_scores_gemma":[0.00012022176,0.99619263,0.00019015018,0.00040651957,0.0008915658,0.0007614109,0.0010578666,0.00018062968,0.00019899457],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99446446,0.0005616114,0.0027362679,0.0012858447,0.00008407975,0.0008677205],"domain_scores_gemma":[0.99604195,0.00043975166,0.0015407335,0.0014263848,0.00039189108,0.00015927647],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.00089662307,0.0015288539,0.0057669943,0.0004566607,0.00035165422,0.000069453636,0.00079509977,0.0013487735,0.0007778653],"category_scores_gemma":[0.00039739412,0.0010981547,0.0013220434,0.0006216295,0.000107386346,0.00029179067,0.00059022964,0.0013211865,0.0003036794],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043391974,0.00045904395,0.000020378615,0.048479814,0.0010630151,0.000004497262,0.00012509708,1.9019525e-7,0.032205522,0.00023876158,0.0142787425,0.90308154],"study_design_scores_gemma":[0.0012696029,0.0002470233,0.0000240626,0.060185283,0.0010968072,0.00061037793,0.0000236792,0.0000018670083,0.0016847675,0.0000070566603,0.933859,0.0009904746],"about_ca_topic_score_codex":0.000091912974,"about_ca_topic_score_gemma":0.000035698053,"teacher_disagreement_score":0.9195803,"about_ca_system_score_codex":0.00007799385,"about_ca_system_score_gemma":0.00025211304,"threshold_uncertainty_score":0.99994767},"labels":[],"label_agreement":null},{"id":"W2028152425","doi":"10.1016/j.vaccine.2007.09.031","title":"Humoral immunity 5 years after booster immunization with an adolescent and adult formulation combined tetanus, diphtheria, and 5-component acellular pertussis vaccine","year":2007,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Children's Hospital; Fraser Health; Sanofi (Canada)","funders":"","keywords":"Tetanus; Diphtheria; Booster dose; Immunization; Immunity; Medicine; Vaccination; Immunology; Virology; Booster (rocketry); Humoral immunity; Immune system","score_opus":0.006995288839747019,"score_gpt":0.21484313290299034,"score_spread":0.20784784406324333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028152425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978732,0.0009254448,0.00033082088,0.00020965144,0.00020387801,0.00036100793,0.000014650514,0.000059080332,0.00002230694],"genre_scores_gemma":[0.9986631,0.00014771083,0.00022866542,0.000106176616,0.00005916869,0.000009247595,0.00053986517,0.000029625171,0.0002163945],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99900514,0.00010256772,0.00031765763,0.0002667264,0.000023858,0.000284047],"domain_scores_gemma":[0.9993567,0.00003137868,0.00011808878,0.00031379846,0.0001297454,0.00005033058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023033436,0.00022578522,0.0002835112,0.00015038245,0.00020907178,0.00004521763,0.00007583978,0.00017529115,0.0004273709],"category_scores_gemma":[0.000014324269,0.00017659113,0.000030131705,0.00014839767,0.000015171255,0.00029248622,0.0000882859,0.00020096307,0.000012347907],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006344622,0.00054877286,0.28455436,0.00005419765,0.0001810629,0.000007850646,0.0009600194,0.0000028233762,0.69429404,0.00022147362,0.000120836296,0.012709979],"study_design_scores_gemma":[0.0048119533,0.00091948087,0.969136,0.000056825054,0.000092869646,0.00011195391,0.00023845497,0.000031400064,0.020520974,0.00003635679,0.0037797394,0.0002639733],"about_ca_topic_score_codex":0.00038034664,"about_ca_topic_score_gemma":0.0003555291,"teacher_disagreement_score":0.6845817,"about_ca_system_score_codex":0.000031860982,"about_ca_system_score_gemma":0.000010362279,"threshold_uncertainty_score":0.7201177},"labels":[],"label_agreement":null},{"id":"W2028204553","doi":"10.1136/ewjm.174.5.325","title":"Above all, do no harm: Assessing the risk of an adverse reaction","year":2001,"lang":"en","type":"review","venue":"Western Journal of Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Harm; Adverse effect; Risk analysis (engineering); Intensive care medicine; Medicine; Psychology; Internal medicine; Social psychology","score_opus":0.055121834149325435,"score_gpt":0.37795999428787,"score_spread":0.3228381601385446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028204553","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015283441,0.9787045,0.000035460802,0.00014827604,0.005337747,0.00018644752,0.000016221586,0.000009574005,0.00027834676],"genre_scores_gemma":[0.0011916276,0.9965367,0.000014989474,0.00004125184,0.0016080819,0.0000027646327,0.000047777277,0.000026225776,0.0005306342],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975754,0.00085101655,0.0011892563,0.00014978525,0.00005025312,0.0001842987],"domain_scores_gemma":[0.99622047,0.00032110192,0.0027837362,0.00032761964,0.0003075699,0.000039523035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014433389,0.00027310863,0.0014740567,0.00024803358,0.00010482281,0.000012752503,0.0003231861,0.00036999807,0.0005864322],"category_scores_gemma":[0.00024561197,0.00013205597,0.00032781725,0.00017586193,0.00018956889,0.00026181707,0.00003590154,0.0010526647,0.00006648449],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007672006,0.00015534868,0.0002534602,0.00079236156,0.0014074105,0.000019735062,0.00022058154,5.226259e-7,0.004054471,0.0000059005197,0.0023370497,0.99067646],"study_design_scores_gemma":[0.0011075139,0.000687986,0.00082037743,0.008271225,0.003077198,0.0042649857,0.00017276008,8.27648e-8,0.000019818124,0.000010398479,0.9814548,0.00011287484],"about_ca_topic_score_codex":0.00011931304,"about_ca_topic_score_gemma":0.000011821391,"teacher_disagreement_score":0.9905636,"about_ca_system_score_codex":0.00005215121,"about_ca_system_score_gemma":0.00013025783,"threshold_uncertainty_score":0.6421021},"labels":[],"label_agreement":null},{"id":"W2028245933","doi":"10.1016/j.vaccine.2005.06.011","title":"Candidacy of LPS-based glycoconjugates to prevent invasive meningococcal disease: Developmental chemistry and investigation of immunological responses following immunization of mice and rabbits","year":2005,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; Steacie Institute for Molecular Sciences","funders":"Medical Research Council","keywords":"Lipid A; Epitope; Heptose; Glycoconjugate; Lipopolysaccharide; Antigen; Microbiology; Neisseria meningitidis; Antigenicity; Heterologous; Residue (chemistry); Mutant; Chemistry; Biology; Biochemistry; Immunology; Bacteria","score_opus":0.009716160945571817,"score_gpt":0.23541551386225118,"score_spread":0.22569935291667936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028245933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975738,0.0018481915,0.00001993982,0.00024412845,0.000042439628,0.00022175416,0.00003055524,0.000012825983,0.000006380953],"genre_scores_gemma":[0.99911994,0.000090833186,0.00057235186,0.00001827575,0.000010022209,0.000012070482,0.00009162601,0.000006600891,0.0000782765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931514,0.00007516925,0.00034416228,0.00014782813,0.000015805572,0.0001018857],"domain_scores_gemma":[0.99947554,0.0001723695,0.0001576954,0.00008825181,0.000078692225,0.000027475315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013994589,0.000109252454,0.00024558688,0.00006485394,0.00006344721,0.000004299132,0.00005923864,0.00009200087,0.00008985881],"category_scores_gemma":[0.0002689412,0.00009517806,0.000033713237,0.00013527092,0.000032890894,0.00007340511,0.00007327792,0.000057132307,0.0000010983032],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007192548,0.00007347341,0.06792891,0.00006455774,0.0000816467,1.9175248e-7,0.00028318842,0.000008851176,0.92977995,0.000014877054,0.00002206019,0.0010230558],"study_design_scores_gemma":[0.0011065454,0.0001254248,0.21927147,0.00012894036,0.000042764364,0.000006132466,0.00008961425,0.0000039182246,0.77894855,0.000011787596,0.00019186454,0.000072967676],"about_ca_topic_score_codex":0.00013402593,"about_ca_topic_score_gemma":0.00002440836,"teacher_disagreement_score":0.15134256,"about_ca_system_score_codex":0.000021200085,"about_ca_system_score_gemma":0.00009459343,"threshold_uncertainty_score":0.38812488},"labels":[],"label_agreement":null},{"id":"W2028261875","doi":"10.1186/1546-0096-10-s1-a81","title":"Distinguishing features in the presentations of childhood inflammatory brain diseases at a tertiary-care centre","year":2012,"lang":"en","type":"article","venue":"Pediatric Rheumatology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Tertiary care; Rheumatology; Internal medicine; Pediatrics; Family medicine","score_opus":0.004676808528249599,"score_gpt":0.22982389251025548,"score_spread":0.2251470839820059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028261875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98399955,0.013897407,0.000004321898,0.00054112705,0.00095906534,0.00023770194,0.000046944722,0.00003733642,0.00027652856],"genre_scores_gemma":[0.99928397,0.00024993013,0.0000110948695,0.00004343018,0.00008200399,0.000034289696,0.00019210445,0.000010638417,0.00009254576],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987405,0.00037453917,0.00036740344,0.00015096397,0.000019973233,0.00034660602],"domain_scores_gemma":[0.99883604,0.00067796436,0.00019579114,0.00022391406,0.000043661883,0.000022625314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001383103,0.00013594977,0.00025686953,0.00014598096,0.00018984455,0.000009586821,0.00019492765,0.00016304564,0.0002585967],"category_scores_gemma":[0.0005574339,0.00009716151,0.00008596718,0.00018226754,0.00007082438,0.00011210153,0.00010812527,0.0001846523,0.000067400884],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017678623,0.00017585451,0.97495794,0.000066301895,0.000030061137,6.1189536e-7,0.0067780036,0.0000020484838,0.0003329987,0.001028896,0.016265307,0.00034430678],"study_design_scores_gemma":[0.0006506207,0.00001272456,0.9923899,0.0000074783748,0.00005864947,0.00012105167,0.0013849009,1.9794945e-7,0.00017082263,0.000041201052,0.005060443,0.000101968704],"about_ca_topic_score_codex":0.00028017646,"about_ca_topic_score_gemma":0.00022287613,"teacher_disagreement_score":0.01743201,"about_ca_system_score_codex":0.000014827711,"about_ca_system_score_gemma":0.000038504302,"threshold_uncertainty_score":0.3962131},"labels":[],"label_agreement":null},{"id":"W2028495495","doi":"10.1371/journal.pone.0044102","title":"Laboratory-Based Surveillance of Neisseria meningitidis Isolates from Disease Cases in Latin American and Caribbean Countries, SIREVA II 2006–2010","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Pan American Health Organization; Instituto de Salud Carlos III; Sanofi","keywords":"Latin Americans; Neisseria meningitidis; Caribbean region; Penicillin; Epidemiology; Meningococcal disease; Geography; Medicine; Environmental health; Biology; Antibiotics; Microbiology; Internal medicine; Bacteria","score_opus":0.019584463822822293,"score_gpt":0.2203179968902054,"score_spread":0.20073353306738312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028495495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947483,0.0031324956,0.0000019212396,0.00021954671,0.00015210826,0.00012787143,0.0015739753,0.00003248764,0.000011293019],"genre_scores_gemma":[0.99933046,0.000112889444,0.00009491144,0.000041617815,0.000052999334,0.000018181321,0.00025363828,0.000013351415,0.00008194884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99928015,0.000120550445,0.00021125995,0.00014896301,0.000012151744,0.00022689601],"domain_scores_gemma":[0.9993504,0.00021292514,0.00013111415,0.0001799656,0.00008292587,0.00004265494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009766636,0.00012666732,0.0003290332,0.0000836732,0.000095714306,0.000009222512,0.00005227159,0.000066708366,0.00035336264],"category_scores_gemma":[0.00015512916,0.000118794815,0.000021643717,0.00019365404,0.00013408108,0.00009323125,0.000035181718,0.00010017891,0.000014636109],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016845556,0.00048888655,0.65711147,0.000020784722,0.000078593475,3.772037e-7,0.000099610144,4.6680162e-7,0.3418698,0.000032909393,0.00009885666,0.00002981827],"study_design_scores_gemma":[0.0008066862,0.00018498569,0.91162235,0.000071108196,0.000078596735,4.679165e-7,0.00007199926,0.000009431629,0.08493966,0.0000076269394,0.0020312252,0.00017584387],"about_ca_topic_score_codex":0.004681261,"about_ca_topic_score_gemma":0.0011670724,"teacher_disagreement_score":0.25693014,"about_ca_system_score_codex":0.000017091334,"about_ca_system_score_gemma":0.000046545938,"threshold_uncertainty_score":0.70766973},"labels":[],"label_agreement":null},{"id":"W2029057185","doi":"10.1016/j.vaccine.2012.02.046","title":"Persistence of the immune response at 5 years of age following infant immunisation with investigational quadrivalent MenACWY conjugate vaccine formulations","year":2012,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"","keywords":"Conjugate vaccine; Medicine; Meningococcal vaccine; Neisseria meningitidis; Pediatrics; Vaccination; Pneumococcal conjugate vaccine; Immunization; Immunology; Antibody; Streptococcus pneumoniae; Biology; Microbiology; Antibiotics","score_opus":0.02034312676930329,"score_gpt":0.23981521605995582,"score_spread":0.21947208929065254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029057185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997834,0.00090053625,0.00003163768,0.00037123845,0.0004911362,0.0002695178,0.000027856931,0.00002060495,0.000053448908],"genre_scores_gemma":[0.99913436,0.000021663729,0.00017815568,0.000022269629,0.000024001194,0.000012043313,0.00007932666,0.000013166422,0.00051503297],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99900967,0.0002131509,0.00041838436,0.00011710532,0.000038189515,0.00020352694],"domain_scores_gemma":[0.99899644,0.0002092682,0.0003056466,0.00037814002,0.00008924555,0.000021284579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046073092,0.00012466103,0.0002644667,0.00010816975,0.00019363558,0.00000467185,0.00015149466,0.000097520315,0.0002847645],"category_scores_gemma":[0.00014629775,0.000086757835,0.00013541136,0.00027153155,0.000028874189,0.00018585936,0.000120947596,0.00011421216,0.000017816685],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007377281,0.00008817969,0.1337001,0.00001208673,0.00017778049,1.6031045e-7,0.00089858606,0.000042018884,0.8634229,0.00070915406,0.00008646908,0.00012488496],"study_design_scores_gemma":[0.0015357975,0.0001504801,0.78792506,0.00006370234,0.00009843242,0.000025247098,0.000108162414,0.000004882989,0.20659772,0.00003350571,0.0033690473,0.000087948836],"about_ca_topic_score_codex":0.00025210055,"about_ca_topic_score_gemma":0.000049291615,"teacher_disagreement_score":0.6568251,"about_ca_system_score_codex":0.000053689968,"about_ca_system_score_gemma":0.00005043489,"threshold_uncertainty_score":0.35378817},"labels":[],"label_agreement":null},{"id":"W2029099197","doi":"10.1002/ebch.229","title":"Two commentaries on ‘Corticosteroids for acute bacterial meningitis’","year":2008,"lang":"en","type":"article","venue":"Evidence-Based Child Health A Cochrane Review Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stollery Children's Hospital; University of Alberta","funders":"","keywords":"Medicine; Cochrane collaboration; Systematic review; Family medicine; Intensive care medicine; Alternative medicine; Pediatrics; MEDLINE; Pathology; Cochrane Library; Political science","score_opus":0.05798678185596203,"score_gpt":0.3708905150261215,"score_spread":0.3129037331701595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029099197","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18974194,0.6529339,0.0010118777,0.14547276,0.007813734,0.002568542,0.00019645004,0.00014403024,0.00011677894],"genre_scores_gemma":[0.18319827,0.77442265,0.0007402931,0.03892004,0.00181189,0.00025127945,0.0003535012,0.00006898953,0.00023306414],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971033,0.0006552114,0.001153952,0.0003335581,0.00007190506,0.00068210956],"domain_scores_gemma":[0.99777305,0.0007225084,0.0007373275,0.00036172045,0.0002457245,0.00015964554],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011636411,0.0003380203,0.0010384165,0.00015590199,0.0019769834,0.000054420583,0.00028198183,0.00011178138,0.0017466409],"category_scores_gemma":[0.00047752206,0.0002637613,0.0004149438,0.00018571217,0.00012907373,0.0003060771,0.000034225428,0.0006877843,0.00015379536],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007832005,0.0016886048,0.004371925,0.0072005615,0.002002856,0.0000815063,0.00062209484,0.000028484908,0.038904864,0.0010825142,0.82076913,0.115415454],"study_design_scores_gemma":[0.011850598,0.007621719,0.0049694492,0.0710507,0.0006471235,0.011704695,0.000022266115,0.0000046066316,0.008221602,0.00007199729,0.88303965,0.0007955896],"about_ca_topic_score_codex":0.00009009629,"about_ca_topic_score_gemma":0.000036204252,"teacher_disagreement_score":0.12148878,"about_ca_system_score_codex":0.00021177526,"about_ca_system_score_gemma":0.0006355827,"threshold_uncertainty_score":0.99998146},"labels":[],"label_agreement":null},{"id":"W2030698134","doi":"10.1016/j.vaccine.2012.03.057","title":"Comparative immunogenicity and safety of different multivalent component pertussis vaccine formulations and a 5-component acellular pertussis vaccine in infants and toddlers: A randomized, controlled, open-label, multicenter study","year":2012,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur; Physicians Committee for Responsible Medicine","keywords":"Medicine; Pertactin; Immunogenicity; Randomized controlled trial; Confidence interval; Hib vaccine; Titer; Pediatrics; Immunology; Internal medicine; Pertussis toxin; Antibody","score_opus":0.02835410803809204,"score_gpt":0.29276722906564184,"score_spread":0.2644131210275498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030698134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804759,0.012842842,0.0001002664,0.0004276994,0.00042998983,0.005593152,0.00006903543,0.000032400956,0.000028694949],"genre_scores_gemma":[0.9971716,0.0020242652,0.00015179193,0.000038454556,0.000046030997,0.0002955653,0.00009592354,0.00002763405,0.00014872654],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99632573,0.0010700662,0.0014748126,0.00053174916,0.00005844465,0.0005391982],"domain_scores_gemma":[0.9976668,0.001126557,0.00052419346,0.00040940137,0.00015447925,0.00011860062],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011167568,0.0005645802,0.0029836039,0.00037761082,0.00036205596,0.000063219195,0.00020629211,0.00020305421,0.000322857],"category_scores_gemma":[0.00017190336,0.00037294443,0.00012837283,0.00019528944,0.00004464148,0.00043950006,0.0007129466,0.00033222113,0.000006366766],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.2673393,0.008487823,0.46336567,0.000083985266,0.0030668196,0.000001831143,0.0077242213,0.000006819892,0.24808249,0.00019216414,0.00008857678,0.0015602887],"study_design_scores_gemma":[0.44018984,0.0005107161,0.55286825,0.00013733494,0.00061227207,0.000031417927,0.0010496019,0.00068819016,0.0032021932,0.0000140976035,0.00036659863,0.0003295267],"about_ca_topic_score_codex":0.0017468927,"about_ca_topic_score_gemma":0.00067776744,"teacher_disagreement_score":0.2448803,"about_ca_system_score_codex":0.000072650466,"about_ca_system_score_gemma":0.000017600167,"threshold_uncertainty_score":0.99987227},"labels":[],"label_agreement":null},{"id":"W2031057162","doi":"10.1186/1471-2334-12-202","title":"Epidemiology of serogroup B invasive meningococcal disease in Ontario, Canada, 2000 to 2010","year":2012,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Public Health Ontario; University of Toronto","funders":"Ontario Ministry of Health and Long-Term Care","keywords":"Medicine; Epidemiology; Case fatality rate; Incidence (geometry); Meningococcal disease; Vaccination; Outbreak; Neisseria meningitidis; Medical microbiology; Pediatrics; Meningococcal vaccine; Public health; Disease; Demography; Virology; Immunology; Internal medicine; Biology; Immunization","score_opus":0.02341011159589834,"score_gpt":0.25181791271641485,"score_spread":0.2284078011205165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031057162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995253,0.0016295717,0.000036683326,0.00005969372,0.0022632624,0.0003688706,0.00013300078,0.00004572793,0.00021017494],"genre_scores_gemma":[0.99855036,0.0000098582,0.000020157066,0.00018373852,0.00009864604,0.0001406425,0.00014403198,0.000016051461,0.0008365012],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983935,0.0003357586,0.00044010472,0.00024907873,0.000017823517,0.00056373817],"domain_scores_gemma":[0.99877906,0.00055406016,0.00013713494,0.00026599425,0.00006966644,0.00019408348],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017886727,0.00021004755,0.00044471215,0.0001721963,0.000109106695,0.000002611595,0.00011328187,0.00013076124,0.0022404366],"category_scores_gemma":[0.0007001373,0.00019345284,0.00011258394,0.00018338584,0.000070336224,0.00013665958,0.000092920935,0.00018912564,0.00010385503],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024393921,0.00041441133,0.99189675,0.000028485481,0.00006110484,0.0000011484991,0.00015869395,0.00013051258,0.001970185,0.00043015313,0.004581238,0.00008335381],"study_design_scores_gemma":[0.0007997749,0.00011183679,0.9917318,0.000033492415,0.00007235655,0.000014513329,0.00003331062,5.99169e-7,0.00057834276,0.00009030071,0.006327945,0.00020572453],"about_ca_topic_score_codex":0.94242823,"about_ca_topic_score_gemma":0.98944116,"teacher_disagreement_score":0.047012977,"about_ca_system_score_codex":0.00041823805,"about_ca_system_score_gemma":0.0014388303,"threshold_uncertainty_score":0.99867165},"labels":[],"label_agreement":null},{"id":"W2031782455","doi":"10.1016/j.ijmm.2014.12.005","title":"A basis for vaccine development: Comparative characterization of Haemophilus influenzae outer membrane vesicles","year":2014,"lang":"en","type":"article","venue":"International Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Glycomics Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences; Alberta Glycomics Centre; Canadian Institutes of Health Research; Austrian Science Fund; University of Texas at San Antonio","keywords":"Bacterial outer membrane; Haemophilus influenzae; Biology; Microbiology; Biogenesis; Virulence; Human pathogen; Bacteria; Pathogen; Biochemistry; Gene; Escherichia coli; Genetics; Antibiotics","score_opus":0.021838281517241945,"score_gpt":0.29221907440446787,"score_spread":0.27038079288722594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031782455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870587,0.00012198449,0.0066329325,0.002715785,0.0032617832,0.000105421095,0.00006277718,0.000009711889,0.00003093494],"genre_scores_gemma":[0.998338,0.000058640235,0.0004441949,0.00039970977,0.00047209056,0.0000070093383,0.00020106156,0.000008797544,0.00007051833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986329,0.00016507016,0.00086341077,0.00013366218,0.000044051103,0.00016089807],"domain_scores_gemma":[0.9982171,0.0003357877,0.0006376723,0.00007882474,0.0006936586,0.000036969883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006630356,0.0001340559,0.00046098334,0.00024550335,0.000052097203,0.000011107109,0.00046179869,0.0002825843,0.0008527597],"category_scores_gemma":[0.000380964,0.00010189007,0.00012763316,0.00006163382,0.000092753864,0.00010400844,0.00008166296,0.00020316317,0.000029439512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005994169,0.0001506783,0.0006342447,0.000014391816,0.00058225915,0.0000013175913,0.00036500194,0.0000018548646,0.98077714,0.000680048,0.0005656879,0.015627947],"study_design_scores_gemma":[0.003425847,0.00034655677,0.009458908,0.00016551251,0.000043203494,0.000812528,0.000034472527,0.000010117568,0.65619594,0.00007188684,0.32931453,0.000120490855],"about_ca_topic_score_codex":0.000015165062,"about_ca_topic_score_gemma":0.000018041475,"teacher_disagreement_score":0.32874882,"about_ca_system_score_codex":0.000038159043,"about_ca_system_score_gemma":0.00013139502,"threshold_uncertainty_score":0.93371207},"labels":[],"label_agreement":null},{"id":"W2031808196","doi":"10.1016/j.jpeds.2005.06.009","title":"Transient Bulging Fontanelle after Vaccination: Case Report and Review of the Vaccine Adverse Event Reporting System","year":2005,"lang":"en","type":"review","venue":"The Journal of Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Medicine; Anterior fontanelle; Fontanelle; Lumbar puncture; Vaccination; Pediatrics; Neuroimaging; Adverse effect; Cerebrospinal fluid; Surgery; Hydrocephalus; Internal medicine; Pathology; Psychiatry","score_opus":0.02397507174620579,"score_gpt":0.30500913723065937,"score_spread":0.2810340654844536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031808196","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0041909427,0.9929841,0.000049604052,0.00014129176,0.002018381,0.00053477986,0.000017948792,0.000007977432,0.00005494174],"genre_scores_gemma":[0.0068021296,0.992218,0.000021467325,0.000019056622,0.00064885675,0.00000898881,0.000006039907,0.000021870797,0.0002536003],"study_design_codex":"design_other","study_design_gemma":"case_report","domain_scores_codex":[0.9955122,0.0005950452,0.0035146018,0.000141337,0.00006040739,0.00017643033],"domain_scores_gemma":[0.9899876,0.00027016396,0.008896693,0.0004264667,0.00039185048,0.000027189933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0040059607,0.0002608185,0.0013728838,0.00014824276,0.00019280662,0.0000073089245,0.00020738179,0.00021807534,0.00012822675],"category_scores_gemma":[0.00053194986,0.00012575924,0.0006363243,0.00035812453,0.00001577865,0.000078752135,0.000100074685,0.00063856185,0.00000442805],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001686046,0.00032583403,0.00036957103,0.30921406,0.00085593463,0.009023517,0.000708794,0.000015726631,0.000041346186,0.000042401396,0.013935751,0.66529846],"study_design_scores_gemma":[0.0002509677,0.000063505344,0.000097064556,0.01550292,0.005763187,0.5006729,0.00009231633,1.4036488e-7,0.0000035955152,7.938696e-7,0.47743025,0.00012241381],"about_ca_topic_score_codex":0.000028126318,"about_ca_topic_score_gemma":0.00001638187,"teacher_disagreement_score":0.66517603,"about_ca_system_score_codex":0.00013095165,"about_ca_system_score_gemma":0.00028750204,"threshold_uncertainty_score":0.51283133},"labels":[],"label_agreement":null},{"id":"W2032638170","doi":"10.1128/mbio.01074-14","title":"Global Population Structure and Evolution of Bordetella pertussis and Their Relationship with Vaccination","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":315,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"National Medical Research Council; National Institute of General Medical Sciences; Chinese University of Hong Kong; Wellcome Trust; University of Hong Kong; Rijksinstituut voor Volksgezondheid en Milieu; National Health and Medical Research Council","keywords":"Bordetella pertussis; Biology; Comparative genomics; Host adaptation; Pertussis toxin; Vaccination; Virulence; Whooping cough; Gene; Pathogen; Immunity; Population; Virology; Microbiology; Genetics; Genome; Genomics; Immune system; Bacteria; Medicine; G protein","score_opus":0.005439137704587907,"score_gpt":0.20897438475046629,"score_spread":0.2035352470458784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032638170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985138,0.0003593527,0.0006579798,0.000081136364,0.0001152944,0.00007039749,0.000022357519,0.000017211165,0.00016245678],"genre_scores_gemma":[0.9997954,0.0000060496213,0.00006429386,0.000004172245,0.000018036637,0.0000014560962,0.000057573085,0.000003064216,0.000049955972],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996782,0.000062161555,0.0000914823,0.00010192962,0.0000054928196,0.00006073851],"domain_scores_gemma":[0.9997818,0.000036853693,0.00006168507,0.00007164304,0.000040958843,0.000007091072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000054664626,0.00006346124,0.000090743146,0.00003634583,0.00010704939,0.000008518747,0.000017344362,0.00010910377,0.000046222704],"category_scores_gemma":[0.000036679106,0.00004358671,0.000009717491,0.000082431514,0.00002049079,0.000072108356,0.000012559814,0.00003965683,9.862198e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048141952,0.000010240781,0.96503097,0.000011881693,0.000017545213,8.0071265e-9,0.00007062697,0.0000048922343,0.020710966,0.006338785,0.000032313725,0.007723625],"study_design_scores_gemma":[0.00042657426,0.00011666329,0.9949479,0.0000089828545,0.000016667318,0.000036869802,0.000040576815,0.000038778355,0.0015093107,0.00237153,0.0004324737,0.00005363664],"about_ca_topic_score_codex":0.0003931388,"about_ca_topic_score_gemma":0.00033657785,"teacher_disagreement_score":0.029916963,"about_ca_system_score_codex":0.000019812249,"about_ca_system_score_gemma":0.000005396344,"threshold_uncertainty_score":0.17774145},"labels":[],"label_agreement":null},{"id":"W2032695346","doi":"10.1016/j.pediatrneurol.2010.01.013","title":"Pattern of Cerebrospinal Fluid Lactic Dehydrogenase During Treatment of Bacterial Meningitis","year":2010,"lang":"en","type":"article","venue":"Pediatric Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Cerebrospinal fluid; Meningitis; Medicine; Lumbar puncture; Lactate dehydrogenase; Aseptic meningitis; Lactic dehydrogenase; Microbiology; Internal medicine; Biology; Surgery; Biochemistry; Enzyme","score_opus":0.007644195566815104,"score_gpt":0.22006696390294278,"score_spread":0.21242276833612767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032695346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99628806,0.00024398262,0.0000052987816,0.00006938716,0.0030977165,0.00013353859,0.000068823334,0.000033172622,0.00006002178],"genre_scores_gemma":[0.9992053,0.00018168522,0.0000122300935,0.0000075820685,0.00044727323,0.000018957451,0.000040618655,0.000016014223,0.00007032597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990287,0.00009625912,0.00036999385,0.00023499495,0.0000129957425,0.00025704608],"domain_scores_gemma":[0.9993501,0.000091134636,0.00022333149,0.00025534054,0.000055894936,0.000024212473],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004842878,0.0001567966,0.00034832262,0.00016421554,0.00007587488,0.000003851842,0.00010376588,0.0002359622,0.0019572827],"category_scores_gemma":[0.000030621264,0.00013787656,0.00011668816,0.00011572726,0.00007944377,0.000048983195,0.00004508575,0.00014605478,0.0000601089],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034403004,0.00028001523,0.104919635,0.000022696322,0.000050964827,0.000004129775,0.00007985404,7.2172173e-7,0.89297324,0.000019075149,0.00004124616,0.001264406],"study_design_scores_gemma":[0.003489686,0.0028097418,0.21481903,0.0000010748182,0.00021462826,0.0005581075,0.0000048153474,0.0000019194324,0.77182406,0.000021289092,0.0060820333,0.00017362667],"about_ca_topic_score_codex":0.0003963833,"about_ca_topic_score_gemma":0.000105508836,"teacher_disagreement_score":0.121149175,"about_ca_system_score_codex":0.000005535538,"about_ca_system_score_gemma":0.00003778778,"threshold_uncertainty_score":0.9989551},"labels":[],"label_agreement":null},{"id":"W2032732688","doi":"10.1039/c2cs35382b","title":"Designing a new antifungal glycoconjugate vaccine","year":2012,"lang":"en","type":"review","venue":"Chemical Society Reviews","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"","keywords":"Epitope; Glycoconjugate; Oligosaccharide; Conjugate; Chemistry; Mannan; Conjugate vaccine; Disaccharide; Antibody; Microbiology; Antigen; Biochemistry; Polysaccharide; Biology; Immunology; Antibiotics","score_opus":0.08387111359293858,"score_gpt":0.32788395285163396,"score_spread":0.24401283925869538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032732688","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001122097,0.99688274,0.00013498186,0.000027676499,0.001395741,0.0011249123,0.000023454475,0.00012756191,0.00027173414],"genre_scores_gemma":[0.0000015255532,0.99342823,0.0009009668,0.00008945268,0.0011447067,0.00016852363,0.00067507004,0.00007360224,0.003517904],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99727994,0.0002819805,0.0011860555,0.0005545695,0.000015489011,0.00068197266],"domain_scores_gemma":[0.99848235,0.00017229855,0.00062935625,0.0005686006,0.00003855876,0.0001088617],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005461183,0.0007147771,0.0032571822,0.000029340035,0.00016835636,0.000042041615,0.0004178927,0.0012895154,0.003950134],"category_scores_gemma":[0.00009371483,0.00049097923,0.002544574,0.0003583796,0.000052563668,0.00012224489,0.00023193011,0.0010521801,0.0052551385],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000032491887,0.000061005067,0.0000035309088,0.005790337,0.00035128792,1.0542349e-7,0.000033968303,1.1320622e-9,0.020647926,0.000020589916,0.14352134,0.82956666],"study_design_scores_gemma":[0.0003446302,0.000019479698,4.2488273e-7,0.005019386,0.0019672785,0.00014874311,0.0000026941832,1.9936047e-8,0.001302969,0.000008820022,0.99066764,0.00051791064],"about_ca_topic_score_codex":0.000025941146,"about_ca_topic_score_gemma":5.544872e-7,"teacher_disagreement_score":0.84714633,"about_ca_system_score_codex":0.000118367825,"about_ca_system_score_gemma":0.00014383845,"threshold_uncertainty_score":0.9997542},"labels":[],"label_agreement":null},{"id":"W2033093171","doi":"10.1371/journal.pone.0051045","title":"Construction of Opa-Positive and Opa-Negative Strains of Neisseria meningitidis to Evaluate a Novel Meningococcal Vaccine","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"Sanofi Pasteur; University of Oxford; Action Medical Research; National Institute for Health and Care Research; Sanofi; GlaxoSmithKline; Pfizer","keywords":"Neisseria meningitidis; Microbiology; Meningococcal disease; Meningococcal vaccine; Biology; Bacterial outer membrane; Virology; Bacterial adhesin; Neisseriaceae; Neisseria; Antibody; Gene; Bacteria; Genetics; Virulence; Escherichia coli; Antibiotics","score_opus":0.03820956808584119,"score_gpt":0.2624849007014687,"score_spread":0.2242753326156275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033093171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99846715,0.00016771775,0.00015147538,0.00012951989,0.00014021914,0.00032633185,0.0001596434,0.000019708643,0.00043823634],"genre_scores_gemma":[0.9972233,0.000022496242,0.0025176285,0.000011237827,0.000050347164,0.00002227242,0.000031261607,0.000010767507,0.000110689376],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927413,0.000079697405,0.0002778796,0.00014596971,0.000018483635,0.00020385018],"domain_scores_gemma":[0.99936986,0.000092979506,0.0001621865,0.00011882334,0.00021932926,0.000036815898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018185216,0.00012511807,0.00036380804,0.000113801245,0.00007341919,0.0000049332198,0.000050775227,0.00010759432,0.00038731867],"category_scores_gemma":[0.00013278,0.00011421316,0.00003587771,0.00014760102,0.00007090114,0.00014602194,0.000061494575,0.00009941821,0.000013305439],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025870648,0.00068965805,0.0096178185,0.000032540338,0.0005552831,3.428918e-8,0.0010238953,6.5186055e-7,0.98531526,0.0018160722,0.000017069107,0.0006730212],"study_design_scores_gemma":[0.0013950055,0.0005405621,0.12829085,0.00013218823,0.0002421597,0.000023828174,0.0005228995,0.000004765771,0.86865485,0.000047654958,0.000034398676,0.000110813555],"about_ca_topic_score_codex":0.00019583652,"about_ca_topic_score_gemma":0.000020175003,"teacher_disagreement_score":0.11867303,"about_ca_system_score_codex":0.00001904355,"about_ca_system_score_gemma":0.000022615839,"threshold_uncertainty_score":0.46574774},"labels":[],"label_agreement":null},{"id":"W2033352779","doi":"10.1258/0956462011916848","title":"Antimicrobial susceptibilities and plasmid patterns of <i>Neisseria gonorrhoeae</i> in Bénin","year":2001,"lang":"en","type":"article","venue":"International Journal of STD & AIDS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"","keywords":"Neisseria gonorrhoeae; Spectinomycin; Microbiology; Tetracycline; Penicillin; Thiamphenicol; Medicine; Antimicrobial; Kanamycin; Ciprofloxacin; Nalidixic acid; Trimethoprim; Virology; Antibiotics; Biology; Chloramphenicol","score_opus":0.009324898242356102,"score_gpt":0.2503939074008736,"score_spread":0.24106900915851748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033352779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970106,0.00031557732,0.00007448171,0.0003054341,0.0020096146,0.00003925416,0.000038990533,0.0000049779223,0.00020106613],"genre_scores_gemma":[0.9987271,0.0006749557,0.000069098656,0.000054872984,0.00014363797,8.51802e-7,0.000012479479,0.0000069708212,0.00031003184],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921787,0.00006432668,0.0004919943,0.00009190369,0.000016050955,0.00011786647],"domain_scores_gemma":[0.9993483,0.00008192109,0.0002496166,0.00006254173,0.00024281492,0.000014803707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021355912,0.00009544073,0.00023021047,0.00029172248,0.000023540659,0.000021542015,0.00018082796,0.00009212,0.0006998599],"category_scores_gemma":[0.000049389164,0.0000818962,0.00007794714,0.000066549714,0.000060166058,0.00021346714,0.000055421882,0.0001768645,0.000008890617],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048337484,0.00016926095,0.46355084,0.000007748214,0.00015326226,0.0000052867467,0.00027763052,0.0000135137025,0.5300383,0.00039487984,0.00037686908,0.00452905],"study_design_scores_gemma":[0.008527161,0.0015295004,0.7254026,0.00057461613,0.000079677295,0.0051503307,0.0014071966,0.000005868931,0.1816534,0.0006712623,0.07460907,0.00038933728],"about_ca_topic_score_codex":0.00030193778,"about_ca_topic_score_gemma":0.0001627947,"teacher_disagreement_score":0.34838492,"about_ca_system_score_codex":0.000032367316,"about_ca_system_score_gemma":0.00003973847,"threshold_uncertainty_score":0.7662976},"labels":[],"label_agreement":null},{"id":"W2034034784","doi":"10.1111/j.1574-6968.2002.tb11078.x","title":"Oral colonization and immune responses to<i>Streptococcus gordonii</i>expressing a pertussis toxin S1 fragment in mice","year":2002,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Medical Research Council; IWK Health Centre","keywords":"Streptococcus gordonii; Immunogenicity; Biology; Microbiology; Antibody; Recombinant DNA; Pertussis toxin; Fusion protein; Virology; Immunoglobulin A; Immune system; Saliva; Colonization; Immunoglobulin G; Immunology; Receptor; Streptococcaceae; Gene; G protein","score_opus":0.013817842398338536,"score_gpt":0.22926384946883183,"score_spread":0.2154460070704933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034034784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907603,0.001263528,0.00009670438,0.006297503,0.0009473745,0.0004389016,0.00006327125,0.00007673716,0.000055672503],"genre_scores_gemma":[0.99628997,0.00007574403,0.00024864424,0.0023026452,0.000049274375,0.000084634186,0.0001464448,0.00002344741,0.0007791843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820936,0.0004023721,0.00041992156,0.0004707255,0.000008065831,0.0004895599],"domain_scores_gemma":[0.9994289,0.00015891445,0.00011734759,0.0002290031,0.000034867073,0.00003091181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018805313,0.00025800127,0.00038654695,0.00030623475,0.00024191533,0.000041433963,0.00015887393,0.0003049591,0.0009093761],"category_scores_gemma":[0.000086560845,0.00023780536,0.000063734675,0.00025498756,0.00017838826,0.00011287467,0.00013895579,0.00027588214,0.00046246513],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017410697,0.00011574614,0.015312033,0.0000076304,0.00006290681,0.000005495012,0.0007392017,0.000012133054,0.9705831,0.000014159886,0.010947947,0.0020255463],"study_design_scores_gemma":[0.004598777,0.00055979454,0.084942296,0.00018959618,0.000073434196,0.00048058468,0.00029204783,0.000017752642,0.68435526,0.000010460015,0.22358826,0.00089170685],"about_ca_topic_score_codex":0.0003446591,"about_ca_topic_score_gemma":0.00014530083,"teacher_disagreement_score":0.2862278,"about_ca_system_score_codex":0.0000865137,"about_ca_system_score_gemma":0.0000124792805,"threshold_uncertainty_score":0.99570304},"labels":[],"label_agreement":null},{"id":"W2034246210","doi":"10.12968/indn.2005.1.9.73843","title":"Recognising meningitis and septicaemia symptoms early","year":2005,"lang":"en","type":"article","venue":"Independent Nurse","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Mary's Hospital Centre","funders":"","keywords":"Medicine; Meningitis; Spotting; Pediatrics; Intensive care medicine; Artificial intelligence","score_opus":0.008089308638298699,"score_gpt":0.23984902023070284,"score_spread":0.23175971159240413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034246210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99273825,0.00048718133,0.000036558235,0.0003109819,0.0009113105,0.00010373847,0.0000105964145,0.000096674405,0.0053047277],"genre_scores_gemma":[0.994443,0.000024255425,0.00008056008,0.000046364385,0.00014021069,0.0000066759044,0.000015959802,0.000013832808,0.0052291625],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.999324,0.000048313843,0.00017015424,0.00021193127,0.00001360082,0.0002319811],"domain_scores_gemma":[0.99970806,0.00003825851,0.000051939372,0.0001395632,0.00003548693,0.000026698372],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009830273,0.00011904569,0.00014387393,0.00007755347,0.00016576036,0.000046357352,0.000068170106,0.00019140521,0.0015118193],"category_scores_gemma":[0.000016729873,0.0001092234,0.000040848285,0.00005624889,0.00005930629,0.00017203516,0.000030719777,0.00019116493,0.00079091033],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010050464,0.00015445396,0.03407512,0.000006462724,0.00020312521,0.0000042176375,0.0010003984,0.0000024573521,0.70399725,0.0013698475,0.0031662388,0.2559199],"study_design_scores_gemma":[0.005430192,0.00067374634,0.33583182,0.0001389453,0.00023737857,0.0015025428,0.0004563724,0.000016528471,0.24900396,0.0005188383,0.4052998,0.0008898461],"about_ca_topic_score_codex":0.00012421362,"about_ca_topic_score_gemma":0.00005762116,"teacher_disagreement_score":0.45499334,"about_ca_system_score_codex":0.000027269787,"about_ca_system_score_gemma":0.000013411115,"threshold_uncertainty_score":0.99998707},"labels":[],"label_agreement":null},{"id":"W2034419694","doi":"10.1007/s12028-013-9853-y","title":"Lumbar Drainage for the Treatment of Severe Bacterial Meningitis","year":2013,"lang":"en","type":"article","venue":"Neurocritical Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Montreal Neurological Institute and Hospital","keywords":"Medicine; Glasgow Coma Scale; Lumbar; Lumbar puncture; Meningitis; Glasgow Outcome Scale; Intracranial pressure; Surgery; Intensive care unit; Retrospective cohort study; Cohort; Cerebrospinal fluid; Anesthesia; Internal medicine","score_opus":0.013775718635831167,"score_gpt":0.2511617365800594,"score_spread":0.23738601794422826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034419694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99577063,0.0005878979,0.00002555381,0.00058082654,0.001511849,0.00051065907,0.0001451552,0.00003295781,0.0008344663],"genre_scores_gemma":[0.99903464,0.000048883965,0.000023296121,0.00003959097,0.00015754502,0.00020388381,0.000071307215,0.000011595791,0.00040926065],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994649,0.00004537751,0.00014414432,0.00014093562,0.000008379141,0.00019621427],"domain_scores_gemma":[0.9994341,0.00022004129,0.000018974404,0.00016784847,0.00014370936,0.000015283349],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000011880034,0.00010003864,0.00016066329,0.00001901619,0.00016304204,0.000021539468,0.00007645984,0.00008780085,0.001650322],"category_scores_gemma":[0.000052939908,0.000063946376,0.00011769701,0.000035710396,0.00008153865,0.000048818696,0.000016910419,0.00004473829,0.00008246384],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007423694,0.00019371898,0.00021215453,0.000041175073,0.000080066224,7.622225e-7,0.00053750665,9.629803e-7,0.966564,0.0036968167,0.0035413736,0.025057241],"study_design_scores_gemma":[0.0044849017,0.005453216,0.0393871,0.00002264139,0.00028416942,0.00013579459,0.0014134174,0.000006547901,0.23452406,0.0006364016,0.7133317,0.00032007592],"about_ca_topic_score_codex":0.00015521918,"about_ca_topic_score_gemma":0.000022046714,"teacher_disagreement_score":0.7320399,"about_ca_system_score_codex":0.000016185422,"about_ca_system_score_gemma":0.000014161587,"threshold_uncertainty_score":0.99926233},"labels":[],"label_agreement":null},{"id":"W2034629823","doi":"10.1097/inf.0000000000000468","title":"A Randomized Study to Evaluate the Immunogenicity and Safety of a Heptavalent Diphtheria, Tetanus, Pertussis, Hepatitis B, Poliomyelitis, Haemophilus influenzae b, and Meningococcal Serogroup C Combination Vaccine Administered to Infants at 2, 4 and 12 Months of Age","year":2014,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital","funders":"GlaxoSmithKline","keywords":"Reactogenicity; Medicine; Immunogenicity; Diphtheria; Tetanus; Vaccination; Booster dose; Meningococcal vaccine; Poliovirus; Hepatitis B; Hepatitis A vaccine; Virology; Immunology; Immunization; Pediatrics; Antibody; Virus","score_opus":0.010445687448776072,"score_gpt":0.26053861805960715,"score_spread":0.2500929306108311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034629823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99465394,0.002644687,0.000059154725,0.00043111303,0.00039808755,0.0016915355,0.00006839765,0.000020034504,0.000033047185],"genre_scores_gemma":[0.9977259,0.0018918912,0.00000905696,0.00008836143,0.00015230797,0.00007508947,0.000006389579,0.000018727636,0.000032274787],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970509,0.0015798673,0.0007739333,0.00024080202,0.00008214115,0.00027236328],"domain_scores_gemma":[0.9983143,0.0006710613,0.0003731869,0.00029578755,0.00020390605,0.00014175575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019314064,0.0002573904,0.00069562945,0.00024135078,0.0007612929,0.00006362268,0.00014765667,0.00007544827,0.00008546473],"category_scores_gemma":[0.0007596555,0.00015171852,0.00013432415,0.00023623528,0.00012520942,0.00010063587,0.00033087656,0.00022243657,0.0000034679188],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.06348603,0.0007790979,0.917027,0.000071826085,0.0009420399,0.0000036797996,0.006159918,0.000028556497,0.007405221,0.000098968754,0.0001524129,0.0038452598],"study_design_scores_gemma":[0.059265416,0.0013616434,0.9367234,0.000032536034,0.0012638022,0.00035988138,0.00017433793,0.00003643236,0.00011294511,0.00027465238,0.00020601977,0.00018889908],"about_ca_topic_score_codex":0.0015770304,"about_ca_topic_score_gemma":0.000567564,"teacher_disagreement_score":0.019696448,"about_ca_system_score_codex":0.000052900064,"about_ca_system_score_gemma":0.000051251583,"threshold_uncertainty_score":0.61869013},"labels":[],"label_agreement":null},{"id":"W2034726312","doi":"10.1016/j.vaccine.2006.10.022","title":"Overcoming the need for a cold chain with conjugated meningococcal Group C vaccine: A controlled, randomized, double-blind study in toddlers on the safety and immunogenicity of Menjugate®, stored at room temperature for 6 months","year":2006,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Immunogenicity; Cold chain; Medicine; Titer; Meningococcal vaccine; Antibody; Virology; Immunology; Immunization; Chemistry; Food science","score_opus":0.011042255309934988,"score_gpt":0.23749655359412603,"score_spread":0.22645429828419103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034726312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843921,0.0010912281,0.00008192984,0.0010192383,0.00025422103,0.012993426,0.00009612404,0.000034255518,0.000037469104],"genre_scores_gemma":[0.9974867,0.00005307447,0.00003247954,0.00006570664,0.000071772156,0.0015545875,0.0001072385,0.00003319163,0.00059525133],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9980182,0.00042348792,0.00078495336,0.00037373716,0.00003419123,0.00036543506],"domain_scores_gemma":[0.9972582,0.0018475389,0.00036748048,0.00035905003,0.0001497182,0.000017998394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016138782,0.00035123207,0.001202214,0.00014183082,0.00058204756,0.000038946877,0.00019238969,0.0002224427,0.00003493507],"category_scores_gemma":[0.000078413956,0.00017097518,0.00020717138,0.0002617952,0.000035459092,0.00007141481,0.000075192336,0.00025199025,9.1129516e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.77766764,0.00046790374,0.002171597,0.000019556697,0.0010161619,5.804517e-7,0.0003430417,0.00013036633,0.21508649,0.0025952728,0.00047602912,0.0000253683],"study_design_scores_gemma":[0.9653728,0.0016908601,0.0054773684,0.00007323581,0.0005581906,0.000022119404,0.00085148896,0.00015904449,0.023060897,0.000060422677,0.0024040525,0.00026950327],"about_ca_topic_score_codex":0.0014830529,"about_ca_topic_score_gemma":0.004624129,"teacher_disagreement_score":0.1920256,"about_ca_system_score_codex":0.00007269617,"about_ca_system_score_gemma":0.00002809107,"threshold_uncertainty_score":0.6972165},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"randomized_trial","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"randomized_trial","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2035135773","doi":"10.1111/j.1365-2958.2009.06693.x","title":"Peptide alarmone signalling triggers an auto‐active bacteriocin necessary for genetic competence","year":2009,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Institute of Musculoskeletal Health and Arthritis; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Bacteriocin; Lytic cycle; Streptococcus mutans; Regulon; Effector; Microbiology; Population; Prophage; Genetics; Lysogenic cycle; Gene; Cell biology; Gene expression; Bacteria; Bacteriophage; Virus","score_opus":0.010435175274251116,"score_gpt":0.23907605790972883,"score_spread":0.22864088263547772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035135773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842858,0.0010986982,0.012552924,0.00041904458,0.0007034187,0.000532646,0.00013983247,0.00013607321,0.00013158015],"genre_scores_gemma":[0.9950966,0.000051379393,0.0028577892,0.00070814556,0.00007332546,0.00004555309,0.00089934014,0.000028197976,0.00023962329],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981368,0.00029375887,0.00039800827,0.0005764165,0.0000080107875,0.0005870028],"domain_scores_gemma":[0.99924153,0.00008345427,0.00016942687,0.00032287068,0.00013732855,0.000045400477],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001516539,0.0003114264,0.00046845383,0.0001547597,0.00027267833,0.000030069885,0.00030309983,0.0004236026,0.00031370667],"category_scores_gemma":[0.000036799116,0.00029497116,0.0001922423,0.00014643793,0.00014320911,0.00010656914,0.000041833264,0.00025508145,0.000111810936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027682944,0.00017990485,0.00008424316,0.0000070528117,0.00013086633,0.0000065537793,0.00010089312,0.000033426375,0.98983896,0.00024105876,0.00032770677,0.008772527],"study_design_scores_gemma":[0.0022594149,0.0018157344,0.0074838204,0.000026216636,0.00011927691,0.00045491,0.00008899775,0.000032558564,0.9391377,0.0003665043,0.047694165,0.0005206846],"about_ca_topic_score_codex":0.00006416894,"about_ca_topic_score_gemma":0.00001489389,"teacher_disagreement_score":0.05070122,"about_ca_system_score_codex":0.0000490037,"about_ca_system_score_gemma":0.000065475295,"threshold_uncertainty_score":0.99995023},"labels":[],"label_agreement":null},{"id":"W2035511274","doi":"10.1016/j.cca.2012.06.018","title":"The clinical diagnostic significance of cerebrospinal fluid d‐lactate for bacterial meningitis","year":2012,"lang":"en","type":"article","venue":"Clinica Chimica Acta","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"Natural Science Foundation of Zhejiang Province; National Natural Science Foundation of China","keywords":"Cerebrospinal fluid; Viral meningitis; Meningitis; Internal medicine; Lactic acid; Medicine; CSF albumin; Gastroenterology; Pathology; Immunology; Biology; Bacterial meningitis; Bacteria; Surgery","score_opus":0.04415685403698388,"score_gpt":0.33499753683182776,"score_spread":0.2908406827948439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035511274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877284,0.0002855115,0.000028540226,0.0009132223,0.009935781,0.0005811984,0.0001712978,0.00005284686,0.00030320525],"genre_scores_gemma":[0.9970075,0.0007386849,0.00015219333,0.000055258148,0.0011432439,0.00012789332,0.00011317455,0.000028352784,0.0006336947],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99771404,0.00034759854,0.0010959497,0.00028488194,0.000020101928,0.0005374497],"domain_scores_gemma":[0.99111223,0.0077230153,0.0004770078,0.0004912761,0.00013423225,0.00006224938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012587401,0.00019953377,0.00049484015,0.000033320026,0.00039580488,0.000029372379,0.0003652412,0.00032341585,0.00052875024],"category_scores_gemma":[0.003712936,0.00013915657,0.0003583442,0.00008854115,0.00042724656,0.00014626492,0.000116965624,0.00029323442,0.00010087548],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016163273,0.00071421964,0.029676536,0.000030668132,0.00043489717,8.862869e-8,0.00011400626,9.652725e-8,0.90831363,0.0011078143,0.04953937,0.008452327],"study_design_scores_gemma":[0.0025974296,0.0010191425,0.19699068,0.000044199107,0.00019926434,0.000021088059,0.0000489782,0.0000020481568,0.051233415,0.0001935258,0.7473822,0.00026800987],"about_ca_topic_score_codex":0.000018499199,"about_ca_topic_score_gemma":0.000016454966,"teacher_disagreement_score":0.8570802,"about_ca_system_score_codex":0.000015462878,"about_ca_system_score_gemma":0.000095069125,"threshold_uncertainty_score":0.57894444},"labels":[],"label_agreement":null},{"id":"W2035522966","doi":"10.1111/j.1574-695x.2011.00911.x","title":"Characterization of Bordetella holmesii isolates from patients with pertussis-like illness in the Netherlands","year":2011,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bordetella pertussis; Microbiology; Biology; Locus (genetics); Virology; Gene; Genetics; Bacteria","score_opus":0.00773537498907919,"score_gpt":0.19922649117658034,"score_spread":0.19149111618750114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035522966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641895,0.00067816867,0.00008837993,0.00025442077,0.0018850691,0.00031588983,0.00014088239,0.000040864103,0.00017740029],"genre_scores_gemma":[0.99764204,0.0002293856,0.000021625328,0.00035561965,0.000049168135,0.00004882435,0.0015433807,0.000021847862,0.00008810191],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99784285,0.00070183317,0.00058296765,0.00039594897,0.00001894537,0.00045747083],"domain_scores_gemma":[0.9988903,0.00026325008,0.0002829969,0.00044279196,0.000099213874,0.000021485412],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030169045,0.00027705205,0.00055587804,0.00016863436,0.00014801686,0.00000621701,0.0005940888,0.0009096001,0.003250784],"category_scores_gemma":[0.00009326382,0.00016413727,0.00008147865,0.00025832572,0.00079339696,0.00008219713,0.00012683518,0.00058879325,0.00012680616],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008968707,0.0006748227,0.08907195,0.0000060818948,0.00031088985,0.0000027907322,0.002717006,3.3169986e-8,0.9004428,0.00010769969,0.00016882413,0.005600256],"study_design_scores_gemma":[0.005542801,0.001443134,0.86456525,0.00009578405,0.00009586956,0.0001412989,0.0005332099,8.0900503e-7,0.08703696,0.00010895312,0.04002025,0.0004156771],"about_ca_topic_score_codex":0.001278467,"about_ca_topic_score_gemma":0.00036637427,"teacher_disagreement_score":0.8134058,"about_ca_system_score_codex":0.000021774102,"about_ca_system_score_gemma":0.00008147926,"threshold_uncertainty_score":0.9976604},"labels":[],"label_agreement":null},{"id":"W2035936197","doi":"10.1016/s0264-410x(00)00545-4","title":"Effectiveness of a single dose of acellular pertussis vaccine to prevent pertussis in children primed with pertussis whole cell vaccine","year":2001,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Health and Social Services; Dalhousie University; Institut National de Santé Publique du Québec; Université Laval","funders":"","keywords":"Medicine; Booster dose; Pertussis vaccine; Booster (rocketry); Whooping cough; Pertussis toxin; Bordetella pertussis; Pediatrics; Immunology; Vaccination; Immunization; Internal medicine; Antigen; Biology","score_opus":0.0061751944118818855,"score_gpt":0.2138918485380919,"score_spread":0.20771665412621002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035936197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951503,0.0023220875,0.00018463687,0.000475016,0.00024809228,0.0013294017,0.00006577198,0.00007336407,0.0001513261],"genre_scores_gemma":[0.9980923,0.00021581717,0.00021088507,0.00003733977,0.00006117119,0.00008697229,0.00019927727,0.00006947005,0.0010267865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972739,0.0004843758,0.0008664325,0.00069477916,0.00006768472,0.0006127852],"domain_scores_gemma":[0.9982397,0.0002685908,0.00035484973,0.0007876494,0.0002561693,0.00009303852],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005545552,0.00050828204,0.0012106623,0.0006610697,0.00012187952,0.00001681127,0.00038403965,0.00033598905,0.00097243366],"category_scores_gemma":[0.00011171955,0.0003738552,0.00021056751,0.0012273561,0.000015977968,0.00019289569,0.00021038837,0.0002858147,0.00006927978],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030666545,0.0026182581,0.23836787,0.00013844365,0.00030691145,0.000003539322,0.00024928627,0.00010036571,0.75270534,0.0000121959265,0.00029788006,0.0021332735],"study_design_scores_gemma":[0.006400995,0.0018986504,0.48358586,0.00031165048,0.00017031669,0.000105271574,0.00007643766,0.0000060371613,0.50413394,0.000010842176,0.0029738469,0.0003261405],"about_ca_topic_score_codex":0.0015751119,"about_ca_topic_score_gemma":0.00029556683,"teacher_disagreement_score":0.24857138,"about_ca_system_score_codex":0.00011765476,"about_ca_system_score_gemma":0.000088776,"threshold_uncertainty_score":0.9999408},"labels":[],"label_agreement":null},{"id":"W2036077051","doi":"10.1128/iai.01169-10","title":"The Bordetella avium<i>BAV1965</i>-<i>1962</i>Fimbrial Locus Is Regulated by Temperature and Produces Fimbriae Involved in Adherence to Turkey Tracheal Tissue","year":2011,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Fimbria; Biology; Bordetella bronchiseptica; Microbiology; Bordetella; Operon; Bordetella pertussis; Virulence; Pertactin; Locus (genetics); Respiratory tract; Chaperone (clinical); Bacteria; Gene; Mutant; Genetics; Respiratory system; Anatomy; Pertussis toxin","score_opus":0.018877632953830995,"score_gpt":0.25118618084698896,"score_spread":0.23230854789315797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036077051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99589396,0.0015727979,0.0000037381633,0.00025988245,0.001344427,0.0004400681,0.000028758965,0.000070057045,0.00038633484],"genre_scores_gemma":[0.9976749,0.00068958016,0.0000092693335,0.00013214853,0.000058524012,0.000044260767,0.000036670717,0.000014093192,0.0013405563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867254,0.00038941117,0.00032708762,0.00030220402,0.000019703066,0.0002890558],"domain_scores_gemma":[0.9993766,0.00008811939,0.000094680516,0.0002893433,0.00010629878,0.000044975095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004233148,0.00021815726,0.0002554127,0.00009179173,0.00062428764,0.000089744346,0.00010583406,0.00033707387,0.000245712],"category_scores_gemma":[0.000120860284,0.00016190608,0.000034301112,0.0002840492,0.00017248117,0.0001754356,0.00009753782,0.00053710834,0.000040476494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004314118,0.00017028111,0.013769195,0.000015099569,0.000051548388,3.7755728e-7,0.0019773596,2.449074e-7,0.965483,0.000043938235,0.0037047735,0.014352784],"study_design_scores_gemma":[0.0017135368,0.001175646,0.20101142,0.000050023064,0.0000356624,0.000063501364,0.00027078693,0.0000020302969,0.68205154,0.00015246488,0.11312109,0.00035231363],"about_ca_topic_score_codex":0.014397237,"about_ca_topic_score_gemma":0.0025786667,"teacher_disagreement_score":0.28343147,"about_ca_system_score_codex":0.000024094805,"about_ca_system_score_gemma":0.000042061074,"threshold_uncertainty_score":0.992166},"labels":[],"label_agreement":null},{"id":"W2036150274","doi":"10.1128/genomea.00838-13","title":"Draft Genome Sequences of Bordetella hinzii and Bordetella trematum","year":2013,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Centre National de la Recherche Scientifique","keywords":"Biology; Microbiology; Bordetella; Genome; Virology; Gene; Genetics; Bordetella pertussis; Bacteria","score_opus":0.011380655884673753,"score_gpt":0.22719566744411465,"score_spread":0.2158150115594409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036150274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916962,0.0045680166,0.00002809308,0.00014790823,0.00056559633,0.0003370288,0.00010898816,0.000038164955,0.0025100326],"genre_scores_gemma":[0.99469346,0.0007934395,0.000102346334,0.00008067752,0.00005774959,0.000040162602,0.0002015383,0.000014463653,0.0040161414],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989064,0.00006933055,0.00037195897,0.000284832,0.00002601346,0.00034148956],"domain_scores_gemma":[0.99938387,0.00002893953,0.00015836205,0.00025668513,0.0001393235,0.00003279662],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013178964,0.00019219452,0.00030779777,0.00011304226,0.00018123884,0.000038215996,0.00016515104,0.00015294123,0.0035855917],"category_scores_gemma":[0.000012263216,0.00016295986,0.000057596153,0.00013450316,0.00015336255,0.0001765231,0.00011376066,0.000112848364,0.00069071446],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021037862,0.000075713215,0.0027958604,0.000032607306,0.00011633033,4.213192e-7,0.00034133196,0.0000022646857,0.9946287,0.000064848005,0.00040747217,0.0015133818],"study_design_scores_gemma":[0.002963341,0.0013797688,0.15863536,0.00006479736,0.00014672335,0.000116146686,0.0010235249,0.0000059375893,0.069152705,0.0009658011,0.7646706,0.0008752751],"about_ca_topic_score_codex":0.0006279292,"about_ca_topic_score_gemma":0.000020436079,"teacher_disagreement_score":0.925476,"about_ca_system_score_codex":0.000024390425,"about_ca_system_score_gemma":0.00003639322,"threshold_uncertainty_score":0.99732524},"labels":[],"label_agreement":null},{"id":"W2036318628","doi":"10.1056/nejmra0804573","title":"Nosocomial Bacterial Meningitis","year":2010,"lang":"en","type":"review","venue":"New England Journal of Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":431,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children; Institute of Infection and Immunity","funders":"","keywords":"Medicine; Bacteremia; Meningitis; Craniotomy; Bacterial meningitis; Antimicrobial; Intensive care medicine; Anesthesia; Surgery; Antibiotics; Microbiology","score_opus":0.03260303026793173,"score_gpt":0.3142626777848733,"score_spread":0.2816596475169416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036318628","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00087771233,0.9726429,0.00001766322,0.00039606163,0.02527392,0.00016489625,0.000019506222,0.000015811358,0.0005915058],"genre_scores_gemma":[0.00012552211,0.9762458,0.00004796163,0.000014440054,0.021933177,0.0000024278204,0.00011062773,0.000033121465,0.0014869035],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99812156,0.00030912238,0.0011290329,0.00015900121,0.000036758618,0.00024454863],"domain_scores_gemma":[0.9980329,0.00040445148,0.0011224165,0.00020892432,0.00014372324,0.00008757871],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006979113,0.00034283393,0.0021908074,0.00033661243,0.000093722454,0.000017299277,0.00031152403,0.0006776514,0.006089435],"category_scores_gemma":[0.0003736748,0.00019667958,0.00035921036,0.0001373998,0.00012190797,0.00007844936,0.00004504288,0.0015140303,0.00011012027],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110871064,0.000027443253,0.0000019923848,0.000267687,0.00032397182,0.000017447825,0.00007197507,1.3820183e-8,0.004628603,0.000071585644,0.030600034,0.9638784],"study_design_scores_gemma":[0.014781951,0.0008191415,0.000004775783,0.0044154823,0.0012684243,0.009653638,0.0000049195787,4.8225153e-9,0.00005901063,0.00003937017,0.9687842,0.0001690592],"about_ca_topic_score_codex":0.0000920356,"about_ca_topic_score_gemma":0.000035606718,"teacher_disagreement_score":0.9637093,"about_ca_system_score_codex":0.000032753196,"about_ca_system_score_gemma":0.0003975852,"threshold_uncertainty_score":0.9948191},"labels":[],"label_agreement":null},{"id":"W2036574878","doi":"10.1007/s002030050002","title":"Characterization of the ftsZ cell division gene of Neisseria gonorrhoeae : expression in Escherichia coli and N. gonorrhoeae","year":2000,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Ottawa","funders":"National Institute of Allergy and Infectious Diseases; Institute of Molecular and Cell Biology; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"FtsZ; Neisseria gonorrhoeae; Biology; Cell division; Molecular biology; Escherichia coli; Microbiology; Gene; Genetics; Cell","score_opus":0.005141151359017643,"score_gpt":0.19623064997935372,"score_spread":0.19108949862033608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036574878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99854493,0.000505077,0.00003102398,0.000046085646,0.0002480508,0.00022409527,0.00012928453,0.000007334672,0.00026412538],"genre_scores_gemma":[0.9987648,0.000559188,0.00012955283,0.000017538523,0.000009971967,0.0000067728565,0.00014661728,0.000009711773,0.0003558566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988942,0.00028407972,0.00044394724,0.00020229898,0.000002479553,0.00017296762],"domain_scores_gemma":[0.99934715,0.00011642507,0.00025973396,0.00024542256,0.000020963818,0.000010278572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008149473,0.00013460088,0.00034622417,0.00009791708,0.0000561116,0.0000021161177,0.00018339406,0.00015904313,0.0003814481],"category_scores_gemma":[0.000014288511,0.00009724022,0.00007561506,0.000119856886,0.00028932863,0.000047655474,0.00012416058,0.00013118511,0.0000059660974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002607561,0.0001751885,0.01919269,0.000040583178,0.000019151894,1.9986194e-8,0.0005099209,0.000006398264,0.97566694,0.000025521065,0.000010568251,0.0040922593],"study_design_scores_gemma":[0.0006742243,0.000136024,0.29251632,0.000053158194,0.000010519639,0.000006521446,0.00002203442,0.000002441434,0.70364964,0.00003577368,0.002830125,0.00006323053],"about_ca_topic_score_codex":0.00012585225,"about_ca_topic_score_gemma":0.000035556062,"teacher_disagreement_score":0.27332366,"about_ca_system_score_codex":0.0000040575937,"about_ca_system_score_gemma":0.00002885821,"threshold_uncertainty_score":0.41765893},"labels":[],"label_agreement":null},{"id":"W2036733905","doi":"10.1038/nrmicro2097","title":"Pathogenic neisseriae: surface modulation, pathogenesis and infection control","year":2009,"lang":"en","type":"review","venue":"Nature Reviews Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":264,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Meningitis Research Foundation; Wellcome Trust; GlaxoSmithKline","keywords":"Biology; Neisseria meningitidis; Niche; Pathogen; Neisseria; Human pathogen; Neisseria gonorrhoeae; Microbiology; Virology; Gene; Genetics; Bacteria; Ecology","score_opus":0.018064150702709846,"score_gpt":0.29562966566490295,"score_spread":0.2775655149621931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036733905","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008693002,0.9935299,0.000065489534,0.000044227356,0.0027841767,0.0021411385,0.00038427164,0.00013326568,0.000048211565],"genre_scores_gemma":[0.00042784525,0.99599487,0.00008641279,0.00017018974,0.00029147687,0.00010189639,0.0022598899,0.00006725534,0.00060016674],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949785,0.0020288115,0.0013868136,0.001008358,0.0000097922775,0.0005877501],"domain_scores_gemma":[0.9978376,0.0002445414,0.0010412895,0.00067786855,0.00014834023,0.000050356728],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00079799636,0.0009554923,0.0039493474,0.00026876884,0.00030781928,0.000043580283,0.0002622063,0.0043070847,0.0003894942],"category_scores_gemma":[0.00017061444,0.0006930692,0.0009010842,0.00049168343,0.00016526676,0.00011002918,0.00009184967,0.0016752409,0.0007480369],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017159102,0.00007781685,0.00004845596,0.0026462402,0.0003322047,0.0000014388613,0.0000068643467,3.8679363e-7,0.05340111,0.00015056433,0.0037792083,0.93953854],"study_design_scores_gemma":[0.00057952316,0.00015341163,0.00020870482,0.002346425,0.0014529462,0.0018512269,5.314855e-7,1.6883052e-7,0.000030354282,0.000021297265,0.99272376,0.00063162076],"about_ca_topic_score_codex":0.000028822353,"about_ca_topic_score_gemma":0.00003832956,"teacher_disagreement_score":0.9889446,"about_ca_system_score_codex":0.00011235069,"about_ca_system_score_gemma":0.00013472002,"threshold_uncertainty_score":0.9995521},"labels":[],"label_agreement":null},{"id":"W2036917576","doi":"10.1001/jama.285.2.177","title":"Effectiveness of a Mass Immunization Campaign Against Serogroup C Meningococcal Disease in Quebec","year":2001,"lang":"en","type":"article","venue":"JAMA","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Medicine; Meningococcal disease; Incidence (geometry); Vaccination; Meningococcal vaccine; Immunization; Epidemiology; Neisseria meningitidis; Population; Outbreak; Disease burden; Pediatrics; Demography; Environmental health; Immunology; Virology; Internal medicine; Antibody","score_opus":0.007470755397999351,"score_gpt":0.23562054544951344,"score_spread":0.2281497900515141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036917576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809,0.00030955867,0.00058690074,0.0000611392,0.00035050232,0.00020847215,0.00001169401,0.000035474834,0.00034623785],"genre_scores_gemma":[0.9992905,0.00005565288,0.000017431952,0.000011997711,0.000027135828,0.000036205387,0.00016652449,0.000009677291,0.00038486626],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991749,0.00034081747,0.00018435364,0.00013722025,0.000008934956,0.00015377234],"domain_scores_gemma":[0.99957764,0.00011667367,0.00006258707,0.00016485415,0.00006258253,0.000015652487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022757736,0.00009424834,0.0001780278,0.0001081304,0.00005360595,0.000014006422,0.00007945332,0.00013165227,0.00014257635],"category_scores_gemma":[0.00008102319,0.00008466398,0.000049642775,0.00023701081,0.000042432126,0.00014873929,0.000030289131,0.00011441354,0.000040155544],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088264653,0.00018353078,0.2184332,0.000050605988,0.00004168462,0.0000034635996,0.00013703376,0.00016155968,0.7732684,0.0006525364,0.00004312576,0.0061421855],"study_design_scores_gemma":[0.0027645729,0.00007559225,0.9570164,0.00015514332,0.00001888351,0.000004035174,0.000080270875,0.00003844049,0.03427941,0.00011998819,0.005314658,0.00013260018],"about_ca_topic_score_codex":0.005277964,"about_ca_topic_score_gemma":0.0010074289,"teacher_disagreement_score":0.738989,"about_ca_system_score_codex":0.00004705038,"about_ca_system_score_gemma":0.00003688485,"threshold_uncertainty_score":0.7978738},"labels":[],"label_agreement":null},{"id":"W2037012199","doi":"10.1542/peds.106.3.477","title":"Predicting the Outcome of Neonatal Bacterial Meningitis","year":2000,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":205,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Hospital for Sick Children","funders":"","keywords":"Medicine; Coma (optics); Leukopenia; Pediatrics; Retrospective cohort study; Cohort; Meningitis; Adverse effect; Univariate analysis; Cohort study; Multivariate analysis; Internal medicine","score_opus":0.012132198937376429,"score_gpt":0.23702956988867538,"score_spread":0.22489737095129894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037012199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963993,0.0004626638,0.000016521552,0.00010487036,0.0016352971,0.00008070612,0.00007349968,0.000042439984,0.0011847018],"genre_scores_gemma":[0.99774146,0.00015022853,0.000030431367,0.000011882183,0.00045947716,0.0000062246904,0.00004795625,0.000007761081,0.0015445778],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994304,0.000054253185,0.00024994643,0.0001007137,0.000011932201,0.00015276413],"domain_scores_gemma":[0.9996153,0.00012121786,0.00007496672,0.00014655519,0.00003343469,0.000008527818],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013658423,0.0000774403,0.00012884065,0.000036519694,0.0001436155,0.000011433493,0.000119610566,0.00010448907,0.006399876],"category_scores_gemma":[0.00005733588,0.0000529967,0.00006473572,0.00013074024,0.000043422686,0.00006002984,0.00003205567,0.00012812327,0.00018930655],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027676,0.00012977717,0.81109136,0.00004570013,0.000114169,0.0000016559069,0.0011965166,0.000022634966,0.08254592,0.0004670064,0.008780902,0.095327616],"study_design_scores_gemma":[0.0030725752,0.0004540225,0.2689568,0.000010886876,0.00036171242,0.00026642482,0.00031909684,0.000013961396,0.02476753,0.00017776959,0.70114267,0.00045653907],"about_ca_topic_score_codex":0.0002646045,"about_ca_topic_score_gemma":0.000021335118,"teacher_disagreement_score":0.6923618,"about_ca_system_score_codex":0.0000057025773,"about_ca_system_score_gemma":0.00001559749,"threshold_uncertainty_score":0.9945084},"labels":[],"label_agreement":null},{"id":"W2037839045","doi":"10.1016/j.vaccine.2006.02.010","title":"Relative efficacy of different immunization schedules for the prevention of serogroup C meningococcal disease: A model-based evaluation","year":2006,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Institut Philippe Pinel de Montréal; Université Laval; Institut National de Santé Publique du Québec","funders":"","keywords":"Medicine; Immunization; Meningococcal disease; Immunity; Booster dose; Booster (rocketry); Herd immunity; Pediatrics; Meningococcal vaccine; Vaccination; Routine immunization; Schedule; Immunology; Neisseria meningitidis; Antigen; Immune system; Biology","score_opus":0.019775565903063036,"score_gpt":0.2985907339764989,"score_spread":0.27881516807343587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037839045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91203713,0.0010634374,0.08569539,0.00018383883,0.00016605093,0.00079085684,0.00003084263,0.00001860252,0.000013831303],"genre_scores_gemma":[0.9988278,0.000014183609,0.0002932202,0.000002692832,0.000032351192,0.000082665465,0.0006085382,0.00000962304,0.00012890583],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99933517,0.00012506294,0.00030578865,0.00011815114,0.00002138893,0.00009442283],"domain_scores_gemma":[0.9990944,0.00022183203,0.0002332821,0.00019515818,0.0002490593,0.000006218831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023603454,0.000095101204,0.00016648794,0.00007046414,0.00011440783,0.000004453808,0.00007386739,0.00007692282,0.00010930026],"category_scores_gemma":[0.00010643103,0.00006275382,0.00011235669,0.00011647382,0.000015407564,0.000066078195,0.000019480889,0.0000600687,0.0000016586142],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019109873,0.0011162985,0.014097696,0.000077654324,0.00025018826,1.20313475e-8,0.000065848086,0.028614983,0.9205455,0.025812887,0.00018233518,0.0073256195],"study_design_scores_gemma":[0.010985843,0.000565044,0.61396617,0.00016163096,0.0010396334,7.5456916e-7,0.000034661745,0.10995591,0.2546562,0.00800135,0.00044396735,0.0001888687],"about_ca_topic_score_codex":0.00004954507,"about_ca_topic_score_gemma":0.000026253805,"teacher_disagreement_score":0.6658893,"about_ca_system_score_codex":0.000022443739,"about_ca_system_score_gemma":0.000046521774,"threshold_uncertainty_score":0.25590265},"labels":[],"label_agreement":null},{"id":"W2038571957","doi":"10.1097/00006454-200112000-00011","title":"Efficacy and safety of clarithromycin versus erythromycin for the treatment of pertussis: a prospective, randomized, single blind trial","year":2001,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Lakeridge Health","funders":"","keywords":"Clarithromycin; Erythromycin; Medicine; Randomized controlled trial; Bordetella pertussis; Adverse effect; Internal medicine; Clinical trial; Antibiotics; Prospective cohort study; Pediatrics; Microbiology; Biology","score_opus":0.022124113595571565,"score_gpt":0.27288171584777726,"score_spread":0.25075760225220567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038571957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865185,0.008217822,0.0004275983,0.00037662868,0.002233624,0.0020694302,0.000044185002,0.000019949424,0.00009224017],"genre_scores_gemma":[0.98613495,0.012541842,0.000011614586,0.000008383969,0.0010208336,0.00013197573,0.000006431959,0.000015278136,0.00012870044],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9986273,0.0003788206,0.0005648013,0.0001568838,0.000036109555,0.00023610817],"domain_scores_gemma":[0.9966023,0.0024740798,0.00046891533,0.00022019613,0.00018860395,0.000045926205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054913375,0.00019492596,0.0005410043,0.00013160227,0.00063794444,0.000033656186,0.0001069198,0.000110698056,0.0001955177],"category_scores_gemma":[0.00041050918,0.000095341406,0.00040327545,0.00021915122,0.00025219325,0.00007477031,0.000023884666,0.00016744527,0.0000037520474],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9828646,0.0024208797,0.007970816,0.000016670441,0.0012985975,8.66573e-7,0.0004896998,0.00007880746,0.0011403993,0.00030541123,0.00020522102,0.0032079846],"study_design_scores_gemma":[0.9681656,0.005071042,0.018637583,0.000013754692,0.0042401766,0.00022461149,0.00016203569,0.000016781203,0.00026751522,0.0005949837,0.0024403841,0.00016554896],"about_ca_topic_score_codex":0.000100776655,"about_ca_topic_score_gemma":0.0000280622,"teacher_disagreement_score":0.014699062,"about_ca_system_score_codex":0.0000726083,"about_ca_system_score_gemma":0.00014480058,"threshold_uncertainty_score":0.49066174},"labels":[],"label_agreement":null},{"id":"W2038880194","doi":"10.1016/j.vaccine.2013.05.098","title":"Quantitation of serogroups in multivalent polysaccharide-based meningococcal vaccines: Optimisation of hydrolysis conditions and chromatographic methods","year":2013,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Health Canada","keywords":"Monosaccharide; Polysaccharide; Chromatography; Chemistry; Hydrolysis; Galactose; Biochemistry","score_opus":0.01591656058785911,"score_gpt":0.2981315721557376,"score_spread":0.2822150115678785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038880194","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99742204,0.0005558613,0.0012253965,0.00021244072,0.00015771789,0.00036166943,0.000017795877,0.00003069931,0.000016352567],"genre_scores_gemma":[0.9966792,0.0000723181,0.0030486993,0.000011576143,0.000010324463,0.000054855773,0.0000901156,0.000011246314,0.00002169381],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99889433,0.00022415178,0.0005233405,0.00019251622,0.000014950957,0.00015072657],"domain_scores_gemma":[0.99916494,0.00024502052,0.00025196114,0.00018011607,0.0001398284,0.000018164226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026229853,0.00013608759,0.0003637265,0.0005044501,0.000056255227,0.000007881686,0.000068439775,0.00014937356,0.00082671404],"category_scores_gemma":[0.000084928346,0.000119037504,0.00007701856,0.00044060333,0.000021353215,0.00017434573,0.000027064498,0.0000973607,0.000009331307],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054704487,0.00018413941,0.0992293,0.000046977984,0.000080790065,6.36019e-8,0.0001354486,0.00010732542,0.89801186,0.00030732455,0.000046600973,0.0017954451],"study_design_scores_gemma":[0.0025558872,0.00024675723,0.6610035,0.00006313384,0.00007507147,0.0000075921866,0.00020576047,0.0009837417,0.3344314,0.00022872032,0.00007798605,0.000120480814],"about_ca_topic_score_codex":0.0021229303,"about_ca_topic_score_gemma":0.00011467768,"teacher_disagreement_score":0.56358045,"about_ca_system_score_codex":0.000011994088,"about_ca_system_score_gemma":0.00001922402,"threshold_uncertainty_score":0.9051939},"labels":[],"label_agreement":null},{"id":"W2039679114","doi":"10.1016/j.vaccine.2008.04.079","title":"Saccharide/protein conjugate vaccines for Bordetella species: Preparation of saccharide, development of new conjugation procedures, and physico-chemical and immunological characterization of the conjugates","year":2008,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Institutes of Health","keywords":"Bordetella bronchiseptica; Bordetella; Microbiology; Bordetella pertussis; Biology; Antibody; Conjugate; Residue (chemistry); Chemistry; Biochemistry; Bacteria; Immunology","score_opus":0.01789042247819469,"score_gpt":0.24122531226453528,"score_spread":0.22333488978634058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039679114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980409,0.0005077332,0.00028068118,0.0001541293,0.00014146187,0.00079812057,0.000046422283,0.000018990871,0.00001155985],"genre_scores_gemma":[0.99882174,0.000292514,0.00036661545,0.000012711896,0.000041403477,0.00002755316,0.000117108975,0.000010764898,0.00030957925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989371,0.000043518266,0.0006223356,0.0002278322,0.000026636177,0.00014258668],"domain_scores_gemma":[0.999,0.000082444385,0.0004980052,0.0001662783,0.00023647366,0.000016772346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011860146,0.00016997522,0.00041780894,0.00006959361,0.00013927302,0.0000064048068,0.00010132658,0.00016549561,0.000073086136],"category_scores_gemma":[0.00016041267,0.000120568446,0.0000540142,0.00014252949,0.00006435414,0.0001269879,0.000081844075,0.00007805359,0.0000011988024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068616384,0.00010171768,0.0058241556,0.00013288938,0.00009868798,2.8128504e-8,0.00065199827,5.863849e-7,0.9904864,0.0005995487,0.00007358944,0.0013442504],"study_design_scores_gemma":[0.0016983674,0.0002330941,0.109058544,0.00009769121,0.000038255148,0.000020121079,0.000051144594,0.000009886952,0.88687295,0.00014668173,0.0016648977,0.00010837031],"about_ca_topic_score_codex":0.00006032054,"about_ca_topic_score_gemma":0.000021050906,"teacher_disagreement_score":0.103613436,"about_ca_system_score_codex":0.000012174686,"about_ca_system_score_gemma":0.00013105199,"threshold_uncertainty_score":0.49166384},"labels":[],"label_agreement":null},{"id":"W2039870129","doi":"10.1016/j.micinf.2011.01.018","title":"Attenuated virulence of min operon mutants of Neisseria gonorrhoeae and their interactions with human urethral epithelial cells","year":2011,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Neisseria gonorrhoeae; Virulence; Biology; Operon; Pilin; Microbiology; Mutant; Interleukin 8; Gene; Cell division; Cell; Pilus; Cytokine; Genetics","score_opus":0.01736525608937425,"score_gpt":0.22687005679377942,"score_spread":0.20950480070440516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039870129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99890906,0.00019027197,0.00011890242,0.000007708874,0.00036865193,0.00012793623,0.00005145291,0.000019598832,0.0002064015],"genre_scores_gemma":[0.9995646,0.00018890477,0.000035147285,0.0000066863327,0.000018656821,0.0000059090216,0.000020503514,0.000009316069,0.00015031053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99943906,0.000060260703,0.00021970208,0.00016086899,0.000003020933,0.00011710439],"domain_scores_gemma":[0.99963844,0.000018489643,0.00014396767,0.00010674982,0.0000790168,0.000013328606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000718252,0.0001283308,0.000214825,0.000095742354,0.0001319972,0.0000083385285,0.000033798144,0.00010078053,0.00031705978],"category_scores_gemma":[0.0000043605687,0.00009222057,0.000033441745,0.00009041364,0.00015948944,0.00016159491,0.000036611546,0.00010852286,0.000005908135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001524194,0.00013626556,0.014444172,0.000029323166,0.000081734506,4.0176253e-8,0.0008052212,5.8711015e-7,0.98161316,0.00008307776,0.00003790968,0.0026160749],"study_design_scores_gemma":[0.0006175168,0.0006654582,0.108189195,0.00006146867,0.000041178995,0.00007562221,0.00015284638,0.0000024539388,0.8880882,0.00003159601,0.0019744865,0.00009997561],"about_ca_topic_score_codex":0.003832171,"about_ca_topic_score_gemma":0.0006758578,"teacher_disagreement_score":0.09374502,"about_ca_system_score_codex":0.00000776147,"about_ca_system_score_gemma":0.000009980364,"threshold_uncertainty_score":0.5793122},"labels":[],"label_agreement":null},{"id":"W2040416568","doi":"10.1007/s10096-006-0089-z","title":"Dexamethasone treatment in adults with pneumococcal meningitis: risk factors for death","year":2006,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Dexamethasone; Medicine; Meningitis; Glasgow Coma Scale; Internal medicine; Adjunctive treatment; Glasgow Outcome Scale; Bacteremia; Anesthesia; Pediatrics; Antibiotics","score_opus":0.020255454395337255,"score_gpt":0.28751166665720873,"score_spread":0.26725621226187146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040416568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957727,0.0014488788,0.00028898928,0.00004248311,0.0014064555,0.00036937193,0.00031695145,0.00005467656,0.00029946995],"genre_scores_gemma":[0.99883133,0.0002471489,0.000111051944,0.000016945422,0.0004491171,0.000010766506,0.00018315716,0.000040544983,0.00010994971],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99600065,0.0018366004,0.0014134609,0.00034586122,0.00001234172,0.0003910767],"domain_scores_gemma":[0.9970304,0.0013506751,0.0010343876,0.00019802799,0.0003012703,0.00008529068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084555685,0.00031885447,0.0009041149,0.00022108192,0.00015461109,0.000024633579,0.00017413712,0.00015930302,0.000100560355],"category_scores_gemma":[0.0006659929,0.00020801373,0.00047197557,0.0001418311,0.00023947346,0.00011385648,0.000038529015,0.0003856815,0.000040672167],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00281604,0.002123467,0.9676437,0.0000120691,0.00057334336,0.000037551054,0.0000909644,0.00020223526,0.021077078,0.000040865234,0.0008691263,0.004513599],"study_design_scores_gemma":[0.02072478,0.0146785015,0.91970605,0.00016724231,0.0006230049,0.00077069446,0.0001451245,0.0000014725535,0.0020657792,0.00013823241,0.040583555,0.00039555447],"about_ca_topic_score_codex":0.00021717526,"about_ca_topic_score_gemma":0.0002348615,"teacher_disagreement_score":0.0479376,"about_ca_system_score_codex":0.00008420648,"about_ca_system_score_gemma":0.00017723518,"threshold_uncertainty_score":0.8482554},"labels":[],"label_agreement":null},{"id":"W2040858492","doi":"10.1016/j.vaccine.2014.09.028","title":"Low pertussis toxin antibody levels in two regional cohorts of Canadian pregnant women","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Capital District Health Authority; Izaak Walton Killam Health Centre; Dalhousie University; BC Centre for Disease Control; Fraser Health","funders":"","keywords":"Pertussis toxin; Medicine; Antibody; Whooping cough; Toxin; Immunology; Bordetella pertussis; Virology; Microbiology; Biology; Internal medicine; Vaccination; Bacteria","score_opus":0.014910390382549078,"score_gpt":0.2567013976872802,"score_spread":0.2417910073047311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040858492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979093,0.0002276484,0.00001787839,0.00057966483,0.00046444894,0.00013268384,0.000030429572,0.000018409606,0.00061949925],"genre_scores_gemma":[0.99850816,0.00008337939,0.00002309594,0.00011784564,0.000056943874,0.00001135343,0.00007393587,0.000011307499,0.0011140003],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99908173,0.00010000971,0.0002708891,0.00019262134,0.00001088378,0.00034388195],"domain_scores_gemma":[0.99954313,0.000055493194,0.00007395287,0.00022663432,0.000055092685,0.0000457031],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022404765,0.00012222286,0.00030414676,0.000503897,0.000070312875,0.000006593153,0.00011137977,0.000105005325,0.0018224564],"category_scores_gemma":[0.000051797153,0.00010022392,0.000041447616,0.00033668138,0.0000122845695,0.00006424176,0.000027714806,0.00011599278,0.000077009696],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007394009,0.00016121648,0.12693132,0.000023841741,0.00007669885,0.0000017309285,0.0003908459,0.000012035129,0.8623835,0.0010820122,0.0028191267,0.0060437303],"study_design_scores_gemma":[0.0026228938,0.00024315625,0.79654586,0.0001461083,0.000013575623,0.000056417695,0.00007646183,0.00001340003,0.0584812,0.00016080006,0.1414275,0.00021260903],"about_ca_topic_score_codex":0.08282781,"about_ca_topic_score_gemma":0.11627299,"teacher_disagreement_score":0.80390227,"about_ca_system_score_codex":0.00006164125,"about_ca_system_score_gemma":0.00008832898,"threshold_uncertainty_score":0.99909},"labels":[],"label_agreement":null},{"id":"W2040980916","doi":"10.1007/s003830000429","title":"Neonatal pertussis requiring extracorporeal membrane oxygenation","year":2001,"lang":"en","type":"article","venue":"Pediatric Surgery International","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; Royal Alexandra Hospital","funders":"","keywords":"Extracorporeal membrane oxygenation; Bordetella pertussis; Medicine; Whooping cough; Membrane oxygenator; Oxygenation; Anesthesia; Intensive care medicine; Pediatrics; Immunology; Vaccination","score_opus":0.022466492719737906,"score_gpt":0.24719394887197146,"score_spread":0.22472745615223355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040980916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9861304,0.00045955353,0.00044295331,0.00073940854,0.008206714,0.00006789899,0.000036409692,0.00013591113,0.0037807259],"genre_scores_gemma":[0.992788,0.0010824298,0.000036036174,0.00006782265,0.0016066717,0.000024823727,0.0005111376,0.000015609143,0.0038674637],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990498,0.00005806928,0.00036734284,0.00024740468,0.000043455217,0.00023397227],"domain_scores_gemma":[0.9991921,0.00035447298,0.00015463724,0.00012944042,0.00014397097,0.00002535455],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002761791,0.00013922562,0.00017087859,0.00038862682,0.00014629998,0.000040638126,0.00014314734,0.00014548756,0.006622224],"category_scores_gemma":[0.00018714595,0.00013025138,0.00015073949,0.00023348324,0.000027497634,0.0003121509,0.000051896895,0.00014813879,0.00058622175],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047391644,0.00034456485,0.79022914,0.000017192004,0.00031810935,0.000035014145,0.00019791356,0.000040958195,0.07557299,0.0013546173,0.048578683,0.08283689],"study_design_scores_gemma":[0.0013406466,0.00005768722,0.3614419,0.000016582699,0.0001153542,0.0013078199,0.000098299715,0.00010279926,0.0090565635,0.00030728691,0.6254983,0.0006567561],"about_ca_topic_score_codex":0.00015003813,"about_ca_topic_score_gemma":0.000023939274,"teacher_disagreement_score":0.5769196,"about_ca_system_score_codex":0.000055925917,"about_ca_system_score_gemma":0.000054997094,"threshold_uncertainty_score":0.9942859},"labels":[],"label_agreement":null},{"id":"W2041092876","doi":"10.1007/bf02849904","title":"Pertussis in Adolescents","year":2007,"lang":"en","type":"review","venue":"Advances in Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Sanofi Pasteur; Sanofi","keywords":"Medicine; Vaccination; Pediatrics; Diphtheria; Immunization; Immunology; Booster dose; Tetanus; Pertussis vaccine; Immunity; Pneumonia; Internal medicine; Immune system","score_opus":0.04383583736231224,"score_gpt":0.3751473641219168,"score_spread":0.33131152675960457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041092876","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029425722,0.99695134,0.0000054116,0.000004072927,0.0018867173,0.0003549379,0.0000091449265,0.000026157493,0.00046795906],"genre_scores_gemma":[0.00039485298,0.99909335,0.000009887929,0.000032855,0.00007421568,0.00006670551,0.000050407238,0.00002546876,0.0002522566],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987706,0.00017879548,0.0004593389,0.00028439699,0.000008701013,0.0002981688],"domain_scores_gemma":[0.9995472,0.00006754508,0.00013983884,0.00022406393,0.000013011989,0.000008372388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018565869,0.00026151893,0.00089225476,0.0003555904,0.000034954897,0.000007349174,0.00020057832,0.00043526458,0.00027121656],"category_scores_gemma":[0.000013810246,0.00019076465,0.00016131547,0.00036572362,0.00004764194,0.00012188535,0.000026009684,0.00044739808,0.00020360909],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029501147,0.00013274557,0.00057212234,0.00054236816,0.000021052083,0.0000019072503,0.00002272801,1.7528382e-7,0.000022997443,0.000045727782,0.000021754393,0.9985869],"study_design_scores_gemma":[0.000608848,0.00005115504,0.00019849371,0.0052751424,0.000009637917,0.000024612971,0.0000074146637,1.385765e-8,0.000015124628,0.000045420944,0.9935626,0.0002015337],"about_ca_topic_score_codex":0.0000611898,"about_ca_topic_score_gemma":0.0002642697,"teacher_disagreement_score":0.99838537,"about_ca_system_score_codex":0.00007294954,"about_ca_system_score_gemma":0.000039565522,"threshold_uncertainty_score":0.77791566},"labels":[],"label_agreement":null},{"id":"W2041845710","doi":"10.1159/000276753","title":"Pharmacokinetic Profiles of Ceftazidime in Cochlear Perilymph, Cerebrospinal Fluid and Plasma: A High-Performance Liquid Chromatographic Study","year":2010,"lang":"en","type":"article","venue":"ORL","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"","keywords":"Perilymph; Cerebrospinal fluid; Pharmacokinetics; Ceftazidime; Chromatography; Chemistry; Penetration (warfare); High-performance liquid chromatography; Medicine; Anesthesia; Pharmacology; Internal medicine; Biology; Cochlea; Bacteria; Anatomy","score_opus":0.006323319814187177,"score_gpt":0.23078378205316427,"score_spread":0.2244604622389771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041845710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99844366,0.00020245838,3.3758928e-7,0.000035108627,0.0008162578,0.00030861006,0.00001278547,0.000035915313,0.00014487174],"genre_scores_gemma":[0.999617,0.00012518732,0.000022999302,0.000007962259,0.00004377825,0.000045503955,0.000012840479,0.0000125234565,0.00011223942],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99927956,0.00005993754,0.00024377224,0.00020346025,0.000014352936,0.00019889273],"domain_scores_gemma":[0.99967706,0.000026264963,0.00007066774,0.00016510196,0.000044407763,0.000016498221],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000133708,0.0001363337,0.0002467745,0.0001729061,0.00009543918,0.000009178096,0.000097392054,0.0001200522,0.00068761106],"category_scores_gemma":[0.000013111931,0.00011554422,0.00002614976,0.00020236839,0.00013735423,0.00009108331,0.00006324893,0.00020224773,0.000044076634],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035501292,0.0003621468,0.10189653,0.00003180337,0.000048948932,7.5923754e-7,0.00019178916,9.936639e-7,0.8962464,0.00010347039,0.000070885624,0.00069130945],"study_design_scores_gemma":[0.0029778334,0.0016216072,0.61083883,0.000030162139,0.000038468163,0.00007811102,0.00011140528,0.000013496308,0.38151148,0.0000041378485,0.002615978,0.00015852063],"about_ca_topic_score_codex":0.00030647463,"about_ca_topic_score_gemma":0.00014229455,"teacher_disagreement_score":0.51473486,"about_ca_system_score_codex":0.000004803201,"about_ca_system_score_gemma":0.000026069425,"threshold_uncertainty_score":0.7528859},"labels":[],"label_agreement":null},{"id":"W2041969493","doi":"10.1016/j.carres.2005.11.036","title":"In vivo determination of Neisseria meningitidis serogroup A capsular polysaccharide by whole cell high-resolution magic angle spinning NMR spectroscopy","year":2006,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service; National Institutes of Health; Genomic Health","keywords":"Chemistry; Neisseria meningitidis; Nuclear magnetic resonance spectroscopy; Magic angle spinning; Polysaccharide; In vivo; Spectroscopy; Resolution (logic); Neisseriaceae; Nuclear magnetic resonance; High resolution; Stereochemistry; Biochemistry; Bacteria; Physics; Antibiotics","score_opus":0.015195383820019006,"score_gpt":0.286049411001717,"score_spread":0.270854027181698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041969493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967715,0.0015957226,0.00019509054,0.00024168128,0.00028583195,0.00028914423,0.00007102668,0.000034859582,0.00051515625],"genre_scores_gemma":[0.99740845,0.00006459772,0.00017383021,0.0000066824573,0.00011745163,0.00004357348,0.00010891885,0.00002542986,0.0020510498],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828655,0.0003512111,0.000387264,0.0003379488,0.000050768893,0.000586267],"domain_scores_gemma":[0.9993327,0.0000718983,0.00010909865,0.00026518316,0.0001949782,0.000026103447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000603778,0.00016395596,0.00027478253,0.0004862799,0.00017166635,0.00004982819,0.00018041064,0.00023837603,0.0004389497],"category_scores_gemma":[0.0000341523,0.00016483827,0.00006129529,0.00072293874,0.00013020859,0.00028577095,0.00009160939,0.00036670468,0.00010235222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070567425,0.0001928174,0.0010843831,0.00002695975,0.000009186122,0.0000029120072,0.000080600366,0.000019827328,0.9956838,0.0003583515,0.0023611486,0.00010947373],"study_design_scores_gemma":[0.0009216018,0.00024106042,0.001430433,0.000036987956,0.00001143604,0.0000071657405,0.00009430772,0.00024954966,0.9929937,0.00040819737,0.0034552745,0.00015029572],"about_ca_topic_score_codex":0.011187341,"about_ca_topic_score_gemma":0.00044658527,"teacher_disagreement_score":0.010740755,"about_ca_system_score_codex":0.00016878714,"about_ca_system_score_gemma":0.00006429134,"threshold_uncertainty_score":0.99539727},"labels":[],"label_agreement":null},{"id":"W2041975784","doi":"10.1515/hsz-2014-0183","title":"Prokaryotic membrane vesicles: new insights on biogenesis and biological roles","year":2014,"lang":"en","type":"review","venue":"Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biogenesis; Vesicle; Chemistry; Cell biology; Biophysics; Membrane; Computational biology; Biology; Biochemistry","score_opus":0.05242072231107568,"score_gpt":0.2808345354033456,"score_spread":0.22841381309226988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041975784","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034154184,0.9641324,0.0000029457967,0.000040251805,0.00036019142,0.0003629322,0.000064473585,0.0001911551,0.00069141877],"genre_scores_gemma":[0.005385079,0.9918683,0.000020764606,0.000048588692,0.0006881994,0.00007699851,0.0008931048,0.000027800901,0.0009911306],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99780685,0.00027916863,0.000610484,0.000869772,0.000017601917,0.00041612354],"domain_scores_gemma":[0.9987273,0.0004455532,0.00028780315,0.00041136667,0.000030695275,0.000097255754],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013863217,0.0006650112,0.0018137374,0.000059794103,0.00018728456,0.00003834171,0.0003476905,0.0022516178,0.0010876724],"category_scores_gemma":[0.00023840585,0.00036988835,0.00041303807,0.00016825517,0.00028378304,0.000021921916,0.00020914065,0.0005351211,0.0005109411],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001092497,0.0002585837,0.000106175044,0.0029310535,0.0005311401,0.0000070227084,0.00001433436,7.402209e-8,0.124893665,0.00030453116,0.0018187221,0.86902547],"study_design_scores_gemma":[0.0003525666,0.00027272463,0.000076877055,0.0011399572,0.00016917821,0.00017118832,0.0000053204317,4.9863765e-8,0.008713403,0.000076151555,0.988513,0.0005095819],"about_ca_topic_score_codex":0.000015178705,"about_ca_topic_score_gemma":0.0000010670084,"teacher_disagreement_score":0.9866943,"about_ca_system_score_codex":0.00003941588,"about_ca_system_score_gemma":0.0000828302,"threshold_uncertainty_score":0.9998753},"labels":[],"label_agreement":null},{"id":"W2043111026","doi":"10.1006/plas.1999.1431","title":"Sequence Analysis of the Family of Penicillinase-Producing Plasmids of Neisseria gonorrhoeae","year":2000,"lang":"en","type":"article","venue":"Plasmid","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Health Canada; World Bank Group","keywords":"Plasmid; Biology; Genetics; Escherichia coli; T-DNA Binary system; Nucleic acid sequence; Sequence analysis; Direct repeat; Sequence (biology); Molecular biology; DNA; Gene; Recombinant DNA; Vector (molecular biology); Base sequence","score_opus":0.02063225339605046,"score_gpt":0.24708438114351738,"score_spread":0.22645212774746692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043111026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998107,0.00030558967,0.0000044009744,0.000050911756,0.0003663389,0.00008428009,0.00015881585,0.000012191345,0.0009104533],"genre_scores_gemma":[0.9990865,0.00010530578,0.00003594436,0.00001435645,0.000010314005,0.0000040106343,0.000035117617,0.0000060116513,0.0007024138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991923,0.00009018502,0.00039948485,0.00017131031,0.00001014541,0.00013658161],"domain_scores_gemma":[0.9991915,0.00010654322,0.00020705594,0.00039569687,0.00009112803,0.000008036684],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015477538,0.000101389705,0.00038108058,0.0001231061,0.000063433996,0.0000026688951,0.00020680999,0.000110812616,0.0018830707],"category_scores_gemma":[0.00005293881,0.000071975795,0.0002048456,0.00067155075,0.00015224915,0.000051432642,0.00003585459,0.00009998105,0.000022976436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109872635,0.00008259899,0.02103342,0.000020632819,0.0006194345,2.4020652e-8,0.00020846182,0.00097080535,0.97505236,0.00016419576,0.00020235575,0.0015358612],"study_design_scores_gemma":[0.00041492807,0.00011841955,0.29219526,0.000041089803,0.0006827134,0.000005720962,0.000072772935,0.00008474368,0.69882494,0.000034028348,0.0074187266,0.00010664176],"about_ca_topic_score_codex":0.001246161,"about_ca_topic_score_gemma":0.00014103024,"teacher_disagreement_score":0.27622738,"about_ca_system_score_codex":0.000011647211,"about_ca_system_score_gemma":0.00004808763,"threshold_uncertainty_score":0.99902934},"labels":[],"label_agreement":null},{"id":"W2043660849","doi":"10.1097/inf.0b013e31816fc339","title":"Ongoing Control of Haemophilus influenzae Type B Infections in Canadian Children, 2004–2007","year":2008,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Dalhousie University; University of British Columbia","funders":"","keywords":"Haemophilus influenzae; Microbiology; Haemophilus; Medicine; Pediatrics; Biology; Antibiotics; Bacteria; Genetics","score_opus":0.007909254006355606,"score_gpt":0.22427002898976747,"score_spread":0.21636077498341186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043660849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929207,0.0037626214,0.000043470503,0.0001810552,0.002296809,0.00026809523,0.00005632984,0.0000404248,0.0004304796],"genre_scores_gemma":[0.99758077,0.0013185164,0.0000018750723,0.00015250618,0.0007957072,0.000010528943,0.000010987995,0.00001995797,0.00010915571],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99852395,0.00027050756,0.0004883741,0.00015430327,0.00003635128,0.0005265291],"domain_scores_gemma":[0.9989343,0.0001594995,0.00024614236,0.00023778631,0.0002451444,0.00017712118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038644823,0.00019255825,0.000282638,0.0006795461,0.0008822587,0.000023955969,0.00017005562,0.00015648744,0.00086461735],"category_scores_gemma":[0.0004315517,0.00014659278,0.0001645098,0.000684697,0.00011359568,0.0001647332,0.000026935002,0.00065230404,0.00022737352],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008880243,0.00020858867,0.99483913,0.0000056517174,0.00011007173,0.00001132071,0.00009931869,0.0010180317,0.00032591974,0.00006588975,0.003065099,0.00016214549],"study_design_scores_gemma":[0.0023459157,0.0001964584,0.98970133,0.000010463896,0.00021784003,0.003500089,0.000009364195,0.000009261787,0.00002258361,0.00021566307,0.0035796517,0.000191361],"about_ca_topic_score_codex":0.061290335,"about_ca_topic_score_gemma":0.018749377,"teacher_disagreement_score":0.042540956,"about_ca_system_score_codex":0.00018519336,"about_ca_system_score_gemma":0.0011388798,"threshold_uncertainty_score":0.9991559},"labels":[],"label_agreement":null},{"id":"W2043759532","doi":"10.1136/adc.2006.111500","title":"Meningococcal A, C, Y and W-135 polysaccharide-protein conjugate vaccines","year":2007,"lang":"en","type":"review","venue":"Archives of Disease in Childhood","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Neisseria meningitidis; Conjugate; Conjugate vaccine; Meningococcal disease; Meningococcal vaccine; Neisseriaceae; Virology; Microbiology; Immunization; Immunology; Antigen; Antibiotics; Biology; Bacteria","score_opus":0.020399905951150852,"score_gpt":0.29131432530989076,"score_spread":0.2709144193587399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043759532","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037172116,0.96111387,0.0000071081618,0.000030306483,0.00028241827,0.000825245,0.00027307536,0.000042044136,0.0002538414],"genre_scores_gemma":[0.017340524,0.9819028,0.000051226387,0.000011814514,0.00010619742,0.000090258254,0.00023002185,0.00004632612,0.000220871],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981048,0.00024278919,0.0007755387,0.0004781285,0.000018198487,0.0003805051],"domain_scores_gemma":[0.99882513,0.00036936332,0.00032874706,0.0003793791,0.000015232568,0.00008216784],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012753562,0.0004328541,0.0013030545,0.0005450759,0.00009335576,0.000019668165,0.00026034183,0.00023337762,0.00019220145],"category_scores_gemma":[0.000107282736,0.00034994984,0.000361029,0.00018750051,0.0001560384,0.000080275546,0.00022680867,0.00044933913,0.0000379137],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015708289,0.00050677283,0.00073594786,0.0036701018,0.0004692068,0.0000070674155,0.00019953406,1.9699112e-7,0.0012957837,0.00128885,0.000044817254,0.99162465],"study_design_scores_gemma":[0.0028782776,0.00032775645,0.021232387,0.021154761,0.0011963431,0.000073046045,0.00003971334,6.072612e-7,0.00039725562,0.0021177435,0.94947594,0.0011061592],"about_ca_topic_score_codex":0.0001430604,"about_ca_topic_score_gemma":0.00002839029,"teacher_disagreement_score":0.99051845,"about_ca_system_score_codex":0.000009602087,"about_ca_system_score_gemma":0.00016811081,"threshold_uncertainty_score":0.9998953},"labels":[],"label_agreement":null},{"id":"W2043891129","doi":"10.1016/j.jinf.2015.04.001","title":"Epidemiology of bacterial meningitis in the North American Arctic, 2000–2010","year":2015,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; Health Sciences Centre; Public Health Agency of Canada","funders":"National Institutes of Health","keywords":"Epidemiology; Bacterial meningitis; Meningitis; Medicine; Arctic; Geography; Biology; Pediatrics; Internal medicine; Ecology","score_opus":0.03878884314876614,"score_gpt":0.29122741974016914,"score_spread":0.252438576591403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043891129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598396,0.00020216285,0.00014376549,0.0003159104,0.0031797707,0.00006485758,0.000003965104,0.0000052026767,0.000100411125],"genre_scores_gemma":[0.9994265,0.000110195804,0.00006378638,0.00004151779,0.00030011605,0.0000028887932,0.000009933181,0.000005018407,0.00004006176],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99855804,0.0006373684,0.0005692702,0.00006960535,0.00001646895,0.00014924954],"domain_scores_gemma":[0.9986705,0.00027104493,0.0007057322,0.00010669171,0.00022735933,0.000018679195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011640276,0.000084652915,0.00034889745,0.00019213975,0.000041154075,0.0000033161782,0.00008146899,0.000079154794,0.00011535948],"category_scores_gemma":[0.0007111443,0.00005413898,0.000104358805,0.00025760988,0.00011087466,0.00013685404,0.000017043403,0.00030928449,0.000019307117],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030675402,0.00015357276,0.97824854,0.000005007395,0.00007838645,0.0000013732952,0.0004962346,0.0000562104,0.014978174,0.00007642413,0.0021860488,0.0034132807],"study_design_scores_gemma":[0.0009119326,0.0011818311,0.98045534,0.000015713733,0.00003666114,0.0007848972,0.000099992205,0.0000011597966,0.0014481012,0.00012586106,0.014880712,0.000057792677],"about_ca_topic_score_codex":0.00260711,"about_ca_topic_score_gemma":0.0016889093,"teacher_disagreement_score":0.013530073,"about_ca_system_score_codex":0.00006317434,"about_ca_system_score_gemma":0.00008715293,"threshold_uncertainty_score":0.3941188},"labels":[],"label_agreement":null},{"id":"W2044334189","doi":"10.4021/jnr.v2i3.104","title":"Neuropsychological Impact of Bilateral Cerebral Abscesses in an Adolescent","year":2012,"lang":"en","type":"article","venue":"Journal of Neurology Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Neuropsychology; Medicine; Neuropsychological assessment; Population; Presentation (obstetrics); Pediatrics; Audiology; Physical medicine and rehabilitation; Psychiatry; Cognition; Surgery","score_opus":0.12090059720474755,"score_gpt":0.4394143369915086,"score_spread":0.31851373978676106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044334189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801,0.00044476683,0.0000017331414,0.00041918596,0.0009434235,0.00008242975,0.0000043185405,0.000005210226,0.00008895695],"genre_scores_gemma":[0.999588,0.000087987115,0.000005889924,0.000050798233,0.00022171246,0.0000016374344,0.0000023313198,0.000009738331,0.000031902517],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99740756,0.0014357613,0.000472159,0.00012583328,0.00004059168,0.000518117],"domain_scores_gemma":[0.9990953,0.00020987535,0.00017134596,0.00017827134,0.00027938,0.000065828004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013225196,0.00010211606,0.0003309477,0.00054851914,0.000061191175,0.00001089379,0.00027713072,0.00024070156,0.00076058146],"category_scores_gemma":[0.00018362359,0.00006672624,0.00013216613,0.00030070829,0.00022161406,0.00027326055,0.00008269941,0.0012596495,0.000038906895],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016160678,0.0008034915,0.5942293,0.0000047026642,0.000023541064,0.000011725042,0.00008721017,0.000007030637,0.4018342,0.000021309914,0.0007768018,0.0005846572],"study_design_scores_gemma":[0.0010392095,0.0054190443,0.98693913,0.000009263072,0.000005929914,0.0012767082,0.000016410513,0.0000014429475,0.0042372877,0.000059221064,0.0009452027,0.000051145307],"about_ca_topic_score_codex":0.000080149,"about_ca_topic_score_gemma":0.00001662169,"teacher_disagreement_score":0.39759693,"about_ca_system_score_codex":0.00001901416,"about_ca_system_score_gemma":0.00006878073,"threshold_uncertainty_score":0.8327834},"labels":[],"label_agreement":null},{"id":"W2044391958","doi":"10.1046/j.1440-1754.2001.00679.x","title":"Meningococcal disease and vaccination in North America","year":2001,"lang":"en","type":"article","venue":"Journal of Paediatrics and Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; Children's & Women's Health Centre of British Columbia","funders":"Pediatric Infectious Diseases Society; Pfizer","keywords":"Outbreak; Meningococcal disease; Medicine; Case fatality rate; Epidemiology; Attack rate; Neisseria meningitidis; Population; Vaccination; Disease; Herd immunity; Virology; Demography; Pediatrics; Environmental health; Internal medicine; Biology","score_opus":0.00888762771699115,"score_gpt":0.25641991633393624,"score_spread":0.2475322886169451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044391958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98372877,0.011192894,0.00007054512,0.004574944,0.0003070767,0.000066394474,0.0000069777507,0.000003746243,0.00004867821],"genre_scores_gemma":[0.97321516,0.026255976,0.000027814966,0.0002837516,0.00018485531,8.60345e-7,0.000007798239,0.0000038523203,0.000019948971],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99942666,0.000070780385,0.00028660352,0.00007218212,0.000012583983,0.000131212],"domain_scores_gemma":[0.99959207,0.00004219666,0.00022209497,0.00003949087,0.00004284322,0.00006128179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018770463,0.00006243226,0.0001716455,0.00017828579,0.000118014446,0.0000124409935,0.000030683757,0.000039172613,0.00004334463],"category_scores_gemma":[0.000043078435,0.000048965154,0.000026678943,0.00017413679,0.00001149046,0.00008360175,0.000018221705,0.00020003387,0.0000019362176],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020517007,0.00017899118,0.94528,0.000037404025,0.000026171834,0.000006025072,0.00046869533,0.0000105833215,0.00008333861,0.00016650073,0.0018025008,0.051734626],"study_design_scores_gemma":[0.0010554986,0.00027807488,0.95458925,0.0000121674475,0.00001465462,0.00012197149,0.00006911906,0.000006489346,0.0000020547695,0.00007135742,0.043728784,0.000050565115],"about_ca_topic_score_codex":0.000057144185,"about_ca_topic_score_gemma":0.00012052793,"teacher_disagreement_score":0.051684063,"about_ca_system_score_codex":0.000024960622,"about_ca_system_score_gemma":0.00006105078,"threshold_uncertainty_score":0.19967411},"labels":[],"label_agreement":null},{"id":"W2044914152","doi":"10.1016/j.vaccine.2008.06.017","title":"Protective activity of the Bordetella pertussis BrkA autotransporter in the murine lung colonization model","year":2008,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"GlaxoSmithKline","keywords":"Filamentous haemagglutinin adhesin; Bordetella pertussis; Pertactin; Pertussis toxin; Microbiology; Pertussis vaccine; Whooping cough; Vaccination; Virology; Biology; Medicine; Antigen; Immunology; Immunization; Bacteria; G protein; Receptor","score_opus":0.013564602020310068,"score_gpt":0.2305206925328942,"score_spread":0.21695609051258413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044914152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972946,0.00013377304,0.00074274023,0.0009434576,0.0002036917,0.00048524715,0.000017590392,0.0000208063,0.00015810481],"genre_scores_gemma":[0.99940854,0.0000529874,0.000013508162,0.00005658359,0.000024936964,0.000032374024,0.0000099208455,0.0000083863315,0.00039276454],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993779,0.00014251721,0.00017703092,0.00014299112,0.000016867705,0.00014268159],"domain_scores_gemma":[0.9995335,0.000046487432,0.000094755975,0.0002554041,0.00006479268,0.00000506888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013373703,0.000105255625,0.00016998177,0.00005680637,0.00019265019,0.0000032908838,0.00015535651,0.00012092653,0.00015805071],"category_scores_gemma":[0.00003200605,0.00005653138,0.000067769455,0.00029471167,0.000021573216,0.00007353032,0.00002831434,0.00020359522,0.00000593473],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051723956,0.0006214861,0.101238586,0.0000364523,0.00011270464,0.0000014196747,0.003285595,0.0012045647,0.88946736,0.00025139382,0.0015949652,0.0016682575],"study_design_scores_gemma":[0.0013856336,0.000107407046,0.90337664,0.000022684293,0.00003968377,0.00007025422,0.000038182137,0.00140086,0.09207799,0.00008724322,0.001283886,0.00010952589],"about_ca_topic_score_codex":0.0005490361,"about_ca_topic_score_gemma":0.0005364243,"teacher_disagreement_score":0.8021381,"about_ca_system_score_codex":0.000023109053,"about_ca_system_score_gemma":0.00004594911,"threshold_uncertainty_score":0.23052828},"labels":[],"label_agreement":null},{"id":"W2045006950","doi":"10.1097/01.inf.0000258699.64164.6d","title":"Transmission of Bordetella pertussis to Young Infants","year":2007,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":475,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Bordetella pertussis; Medicine; Pediatrics; Vaccination; Grandparent; Transmission (telecommunications); Population; Serology; Bordetella; Whooping cough; Immunology; Environmental health; Antibody","score_opus":0.00653189995056633,"score_gpt":0.24508663132926306,"score_spread":0.23855473137869673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045006950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927326,0.0014270203,0.0024831123,0.00022398346,0.0019409155,0.00017034357,0.000013168403,0.000041162468,0.0009677127],"genre_scores_gemma":[0.9981395,0.00073824305,0.0000228543,0.0000734418,0.00065624446,0.0000036131846,0.000003015388,0.000015230461,0.0003478786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894714,0.00012907812,0.00041996138,0.00012711121,0.000039545237,0.00033717084],"domain_scores_gemma":[0.99916077,0.00016962385,0.00018120623,0.00018740358,0.00017107268,0.0001299217],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006518329,0.00014734441,0.00019057283,0.0002893923,0.0005021465,0.000027241578,0.00016471208,0.0001011874,0.00094967533],"category_scores_gemma":[0.00016153108,0.0000925179,0.00018347688,0.0004029329,0.0000379786,0.00008368004,0.000039017385,0.00032119715,0.0001139208],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011186197,0.0005002165,0.88563436,0.000036756737,0.00018343837,0.000010219535,0.0010455209,0.000094823925,0.07479496,0.000106642816,0.0062304162,0.030244024],"study_design_scores_gemma":[0.0017409122,0.00043739192,0.9723711,0.00002473888,0.00056358264,0.001178559,0.00013484118,0.0000041300514,0.0038510743,0.00048456233,0.01890047,0.00030866187],"about_ca_topic_score_codex":0.00009152689,"about_ca_topic_score_gemma":0.000018536932,"teacher_disagreement_score":0.08673672,"about_ca_system_score_codex":0.000038873717,"about_ca_system_score_gemma":0.00011169914,"threshold_uncertainty_score":0.9999636},"labels":[],"label_agreement":null},{"id":"W2045168629","doi":"10.1097/01.ftd.0000211813.04688.6c","title":"Antimicrobial Therapy and Local Toxicity of Intraventricular Administration of Vancomycin in a Neonate With Ventriculitis","year":2006,"lang":"en","type":"article","venue":"Therapeutic Drug Monitoring","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Sistema Nacional de Investigadores","keywords":"Vancomycin; Ventriculitis; Medicine; Cerebrospinal fluid; Hydrocephalus; Anesthesia; External ventricular drain; Surgery; Internal medicine; Staphylococcus aureus","score_opus":0.01006176093637409,"score_gpt":0.22629085890955597,"score_spread":0.21622909797318188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045168629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728024,0.001873309,0.0003351624,0.000043185486,0.0002670601,0.00014845721,0.0000060461775,0.0000131720035,0.00003333808],"genre_scores_gemma":[0.99962616,0.00019918596,0.00006879215,0.0000027558842,0.00004704319,0.0000060485104,0.000007902629,0.0000073496954,0.00003475511],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939764,0.00007710745,0.00024584064,0.00012245224,0.000016310436,0.00014066845],"domain_scores_gemma":[0.99970216,0.000043444186,0.00011412504,0.0000892235,0.00004426214,0.000006788834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010836835,0.000101431884,0.00021276128,0.00008874658,0.000037281396,0.0000061589467,0.00004937982,0.000071731076,0.000017852162],"category_scores_gemma":[0.000001485534,0.00008096092,0.000028661341,0.00016030626,0.000083931256,0.000059098962,0.000012146494,0.00009015566,9.0359566e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052266935,0.00028541716,0.10006825,0.000028144881,0.00006663534,0.0000035659357,0.00018820833,0.00007633056,0.86909056,0.00026599842,0.00000470558,0.029399522],"study_design_scores_gemma":[0.0012941018,0.00014146966,0.25669593,0.00006062574,0.000013914061,0.00004451237,0.000083783976,0.000003500679,0.7412247,0.00006855411,0.00029541107,0.00007349759],"about_ca_topic_score_codex":0.00079136586,"about_ca_topic_score_gemma":0.000055527737,"teacher_disagreement_score":0.15662767,"about_ca_system_score_codex":0.000017877257,"about_ca_system_score_gemma":0.000026087859,"threshold_uncertainty_score":0.33014902},"labels":[],"label_agreement":null},{"id":"W2045341280","doi":"10.1097/inf.0b013e3181c37df1","title":"Haemophilus Disease in Alaskan and Canadian Children","year":2010,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Population; Census; Incidence (geometry); Tetanus; Diphtheria; Pediatrics; Epidemiology; Demography; Vaccination; Hib vaccine; Poliomyelitis; Disease; Immunization; Environmental health; Immunology; Internal medicine","score_opus":0.004078178110853628,"score_gpt":0.2062264623272128,"score_spread":0.2021482842163592,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045341280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948614,0.0012440799,0.0000025000977,0.0011471689,0.002234932,0.0001988384,0.000059900696,0.000033397537,0.00021777916],"genre_scores_gemma":[0.9979624,0.0006450566,0.000002089067,0.00014458367,0.0010485692,0.000013066145,0.000015658245,0.000015990481,0.00015258914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990466,0.00013713354,0.00023228714,0.00016594162,0.00002116857,0.00039686184],"domain_scores_gemma":[0.9992414,0.00007232963,0.00009341286,0.00021097118,0.000058445818,0.00032340866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002846974,0.00016199528,0.0001453464,0.00035720773,0.00072320463,0.00009583856,0.0001476182,0.000103763115,0.0007951147],"category_scores_gemma":[0.00020765678,0.00011368291,0.00008403076,0.00022872203,0.00008642913,0.00013665918,0.00004651447,0.0008408635,0.0001244385],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053347783,0.00007904085,0.99681103,0.0000037925406,0.00003176149,0.000012346585,0.000054093576,0.00001103856,0.00036717337,0.00019500354,0.0014683724,0.0009129722],"study_design_scores_gemma":[0.0008770249,0.00003113039,0.9942584,0.0000031735242,0.00015414965,0.0006899378,0.000006107013,0.0000049696114,0.0000061058417,0.0014528093,0.0023633006,0.000152896],"about_ca_topic_score_codex":0.01640264,"about_ca_topic_score_gemma":0.03078075,"teacher_disagreement_score":0.01437811,"about_ca_system_score_codex":0.000043994623,"about_ca_system_score_gemma":0.00045280549,"threshold_uncertainty_score":0.99014723},"labels":[],"label_agreement":null},{"id":"W2045772710","doi":"10.1002/jmv.10524","title":"Herpes simplex type 1 shedding is associated with reduced hospital survival in patients receiving assisted ventilation in a tertiary referral intensive care unit","year":2003,"lang":"en","type":"article","venue":"Journal of Medical Virology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Northern Ireland Chest Heart and Stroke; Heart and Stroke Foundation of Canada; CHEST Foundation","keywords":"Medicine; Intensive care unit; Confounding; Herpes simplex virus; Cohort; Logistic regression; Viral shedding; Internal medicine; Cohort study; Survival analysis; Throat; Biology; Immunology; Virus; Surgery","score_opus":0.021164775702916888,"score_gpt":0.2831875276154487,"score_spread":0.26202275191253177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045772710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99713576,0.00019942973,0.0000089049345,0.00086957676,0.0016410005,0.000088117355,0.0000031468269,0.000007477335,0.000046573794],"genre_scores_gemma":[0.9995624,0.000037379185,0.000014256457,0.00027063309,0.00003508111,0.0000018863883,0.00004569164,0.000011636396,0.000021049884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99834937,0.0006289098,0.00054662663,0.00014471864,0.00007086006,0.00025950608],"domain_scores_gemma":[0.9988549,0.00018645663,0.00033987834,0.000079227524,0.000499563,0.000039971354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056876004,0.00012582105,0.00039452553,0.00024917515,0.000053068252,0.000008817754,0.00012206474,0.00048483934,0.00047651093],"category_scores_gemma":[0.0023976953,0.00009671291,0.00005382662,0.00026674414,0.000077933095,0.0001120026,0.00003209186,0.0006120162,0.000007660809],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010382484,0.00039497545,0.97874975,0.000009629666,0.00023652487,0.00005114034,0.0018312779,0.000006104014,0.008874711,0.000030423053,0.0005396723,0.008237513],"study_design_scores_gemma":[0.004608705,0.0011032547,0.9897598,0.0001814162,0.000034002747,0.000054462234,0.0008632925,0.0000027548533,0.0006965542,0.000027545357,0.0025628323,0.00010540429],"about_ca_topic_score_codex":0.00007970879,"about_ca_topic_score_gemma":0.00044486256,"teacher_disagreement_score":0.011009995,"about_ca_system_score_codex":0.00010639894,"about_ca_system_score_gemma":0.00015002546,"threshold_uncertainty_score":0.52174604},"labels":[],"label_agreement":null},{"id":"W2046464921","doi":"10.1128/jcm.00908-07","title":"Analysis of Phenotypic Variants of the Serogroup C ET-15 Clone of <i>Neisseria meningitidis</i> by Pulsed-Field Gel Electrophoresis","year":2007,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"European Commission; University of Oxford; Wellcome Trust","keywords":"Neisseria meningitidis; Pulsed-field gel electrophoresis; Serotype; Biology; Antigen; clone (Java method); Microbiology; Virology; Meningococcal disease; Neisseriaceae; Neisseria; Antigenic variation; Genotype; Gene; Genetics; Bacteria; Antibiotics","score_opus":0.020958986720059528,"score_gpt":0.3203782135420704,"score_spread":0.2994192268220109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046464921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96737826,0.0038701051,0.00022238988,0.02355008,0.0040208357,0.00022668713,0.00058730255,0.000008247801,0.00013610646],"genre_scores_gemma":[0.95777655,0.002299851,0.0001816698,0.03754816,0.0008355723,0.0000036111908,0.0004982051,0.00006011103,0.0007962646],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9930148,0.0017391304,0.0043212636,0.0003854808,0.000037830912,0.00050148054],"domain_scores_gemma":[0.98958665,0.0028967047,0.006046086,0.00065862056,0.0007772622,0.00003466334],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0022968536,0.00041189097,0.0033221794,0.0006047515,0.00007050016,0.000008098792,0.0009506247,0.0029020903,0.0011201355],"category_scores_gemma":[0.0009302731,0.00027237914,0.002142409,0.0008485481,0.00053911953,0.00006621423,0.00019874815,0.0030637523,0.000007501553],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000987726,0.00036589365,0.008189771,0.000056557285,0.007830659,0.0000030126885,0.000027141963,0.000003035053,0.7124814,0.000015815234,0.2695494,0.0004896015],"study_design_scores_gemma":[0.004733363,0.0050725956,0.036797073,0.0003947763,0.012286068,0.0005615792,0.0000444946,0.0000011158303,0.33306187,0.00013449123,0.60627013,0.00064244616],"about_ca_topic_score_codex":0.00022199673,"about_ca_topic_score_gemma":0.000077610974,"teacher_disagreement_score":0.37941954,"about_ca_system_score_codex":0.00003026677,"about_ca_system_score_gemma":0.00029910833,"threshold_uncertainty_score":0.9999728},"labels":[],"label_agreement":null},{"id":"W2047060834","doi":"10.1016/j.devcel.2010.12.011","title":"A Receptor for Meningococcus: Eliciting β-Arrestin Signaling for Barrier Breaching","year":2011,"lang":"en","type":"letter","venue":"Developmental Cell","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Biology; Pilus; Neisseria meningitidis; Microbiology; Neisseria; Receptor; Signal transduction; Cell biology; Bacteria; Genetics; Virulence; Gene","score_opus":0.02764885443727239,"score_gpt":0.23609315222504773,"score_spread":0.20844429778777535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047060834","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.836823,0.00397323,0.017254699,0.04932059,0.04535835,0.016335325,0.007848477,0.0019917234,0.021094617],"genre_scores_gemma":[0.121670425,0.0001360632,0.18320632,0.41527486,0.022597583,0.0123857055,0.079219595,0.0018310872,0.16367836],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980483,0.00008751637,0.00056664617,0.00057981734,0.000020423533,0.0006972802],"domain_scores_gemma":[0.9989433,0.0004301883,0.00032449598,0.00015646403,0.00012034191,0.000025196352],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033106253,0.0004607817,0.00051397266,0.00019295486,0.0006334292,0.00005862059,0.00027745587,0.0010690215,0.0013814489],"category_scores_gemma":[0.0000887196,0.0004411667,0.0002549918,0.00007368193,0.000047858583,0.00009429342,0.00010188237,0.0007829427,0.0002831558],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007361168,0.000021702144,0.000074225216,0.00017033513,0.00013397187,8.1856285e-7,0.00045137957,1.2950014e-7,0.47668964,0.0000062744994,0.5205066,0.001871288],"study_design_scores_gemma":[0.0009829309,0.00009183226,0.000008938506,0.00011886522,0.00006788702,0.000027722905,0.0001142928,7.9108594e-7,0.23264115,0.00006608106,0.7654073,0.0004721941],"about_ca_topic_score_codex":0.0001249328,"about_ca_topic_score_gemma":0.000008400691,"teacher_disagreement_score":0.71515256,"about_ca_system_score_codex":0.00012935014,"about_ca_system_score_gemma":0.00016448175,"threshold_uncertainty_score":0.999804},"labels":[],"label_agreement":null},{"id":"W2047639252","doi":"10.1016/j.vaccine.2007.04.071","title":"Vaccinating adolescents against meningococcal disease in Canada: A cost-effectiveness analysis","year":2007,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministère de la Santé et des Services Sociaux (Québec); Université Laval","funders":"","keywords":"Medicine; Meningococcal disease; Herd immunity; Vaccination; Meningococcal vaccine; Population; Booster dose; Case fatality rate; Immunization; Conjugate vaccine; Disease burden; Incidence (geometry); Vaccine efficacy; Pediatrics; Immunology; Neisseria meningitidis; Demography; Environmental health; Immune system","score_opus":0.012012093346738187,"score_gpt":0.25997304061393595,"score_spread":0.24796094726719775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047639252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792874,0.00036790015,0.00048505943,0.00005748852,0.00060630456,0.00038078587,0.000024823854,0.000039513467,0.00010937018],"genre_scores_gemma":[0.99961835,0.00001628564,0.000009916725,0.00006735082,0.000049382415,0.000020687616,0.00013870678,0.000014207573,0.00006511039],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986782,0.00015654377,0.00037184218,0.0003138945,0.00002183868,0.00045765925],"domain_scores_gemma":[0.99937123,0.00013955725,0.000103964325,0.00023942228,0.00007788592,0.000067957626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046380298,0.00018759273,0.0003785615,0.00037432287,0.0001282559,0.000011624997,0.00012957392,0.000087613975,0.00026159175],"category_scores_gemma":[0.00010591814,0.00017004722,0.0000980616,0.0009866516,0.000003621191,0.000081240185,0.000071186005,0.00023246049,0.00002645052],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004634533,0.00011964044,0.9506863,0.000023838464,0.00022833035,0.000017517003,0.000022588076,0.0003555348,0.03982669,0.000031784606,0.00007740779,0.008146943],"study_design_scores_gemma":[0.0021008323,0.0000220583,0.9876207,0.00005918764,0.00015043617,0.0000027996932,0.00004413319,0.0000927742,0.007128649,0.0000058505643,0.0025842646,0.00018831386],"about_ca_topic_score_codex":0.54791474,"about_ca_topic_score_gemma":0.8556752,"teacher_disagreement_score":0.30776045,"about_ca_system_score_codex":0.00046922965,"about_ca_system_score_gemma":0.00023385715,"threshold_uncertainty_score":0.69343245},"labels":[],"label_agreement":null},{"id":"W2048064978","doi":"10.1371/journal.pone.0020725","title":"Nanopods: A New Bacterial Structure and Mechanism for Deployment of Outer Membrane Vesicles","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Molecular and Cellular Biosciences; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Joint Genome Institute; U.S. Department of Energy; Office of Science; Howard Hughes Medical Institute; National Institutes of Health; National Science Foundation","keywords":"Mechanism (biology); Vesicle; Chemistry; Biophysics; Bacterial outer membrane; Membrane; Cell biology; Biology; Physics; Biochemistry; Escherichia coli","score_opus":0.04317127956932178,"score_gpt":0.2173995312545563,"score_spread":0.17422825168523454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048064978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989152,0.000089071145,0.00011711164,0.000087257744,0.0003499814,0.0002655308,0.00011514438,0.000029920036,0.00003079543],"genre_scores_gemma":[0.9969774,0.000037384558,0.0023745312,0.0000351618,0.00011524058,0.000013938798,0.000031094616,0.000013235977,0.00040201357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999537,0.000026816395,0.0001606053,0.00013664378,0.000008741495,0.00013017833],"domain_scores_gemma":[0.9997107,0.000023403822,0.000070195674,0.00011897445,0.00005939937,0.000017332839],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000034085915,0.00009451883,0.00021847199,0.000041381492,0.000052259657,0.0000058274672,0.00005739102,0.00013310435,0.001037525],"category_scores_gemma":[0.000021199805,0.00007782587,0.000032141765,0.000025699721,0.000027244732,0.000057697536,0.00002762975,0.00004706837,0.000008091594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031586876,0.00020246612,0.0003567587,0.000048347076,0.00037688788,1.0198357e-7,0.0002923824,6.035038e-9,0.99509597,0.0026413745,0.00008605615,0.00058380753],"study_design_scores_gemma":[0.001565812,0.0003828115,0.0017009896,0.000036459795,0.00018517973,0.000006252483,0.00001672561,5.6228583e-7,0.9933779,0.0022751517,0.00036420487,0.00008790469],"about_ca_topic_score_codex":0.00015530348,"about_ca_topic_score_gemma":0.00005012194,"teacher_disagreement_score":0.0022574198,"about_ca_system_score_codex":0.000004978759,"about_ca_system_score_gemma":0.000017885692,"threshold_uncertainty_score":0.99987566},"labels":[],"label_agreement":null},{"id":"W2049342041","doi":"10.1001/archpedi.155.12.1301","title":"Predictors of Bacterial Meningitis in the Era After Haemophilus influenzae","year":2001,"lang":"en","type":"article","venue":"Archives of Pediatrics and Adolescent Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Meningitis; Cerebrospinal fluid; Lumbar puncture; White blood cell; Haemophilus influenzae; Pleocytosis; CSF albumin; CSF pleocytosis; Internal medicine; Gastroenterology; Absolute neutrophil count; Gram staining; Immunology; Pediatrics; Microbiology; Biology","score_opus":0.009590940498830802,"score_gpt":0.23228279657467493,"score_spread":0.22269185607584413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049342041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948443,0.003351867,0.000023543877,0.00055702444,0.00062820443,0.00015621536,0.000025608842,0.0000070539786,0.00040615626],"genre_scores_gemma":[0.99562234,0.003819732,0.000015647953,0.00006686896,0.00038038607,0.00000646083,0.00003302666,0.0000060528496,0.000049516377],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992076,0.000103178725,0.00036541178,0.00013484346,0.000026720654,0.00016220025],"domain_scores_gemma":[0.99949694,0.0001847174,0.00013027848,0.00014798013,0.000021506812,0.000018605097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015918197,0.0001120957,0.0002647666,0.0002030403,0.00003918318,0.0000031910781,0.00011518669,0.00006445898,0.000144667],"category_scores_gemma":[0.00007709372,0.000069763606,0.000041724892,0.00016709218,0.00024400478,0.000039267485,0.000054527984,0.00017158363,0.0000014914533],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009179529,0.00032220068,0.85132504,0.00019576366,0.000040352224,0.000008469518,0.003489676,0.0000018575762,0.12997574,0.00032420148,0.0019116667,0.011487105],"study_design_scores_gemma":[0.002312207,0.00046344424,0.9813304,0.00013506325,0.00008844422,0.000052554762,0.00026462067,0.0000014796996,0.00081335957,0.00024171398,0.014206772,0.00008992681],"about_ca_topic_score_codex":0.00011113278,"about_ca_topic_score_gemma":0.000027662549,"teacher_disagreement_score":0.1300054,"about_ca_system_score_codex":0.0000026561288,"about_ca_system_score_gemma":0.000020683994,"threshold_uncertainty_score":0.28448772},"labels":[],"label_agreement":null},{"id":"W2049829039","doi":"10.1503/cmaj.050751","title":"A case of recurrent meningitis","year":2006,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre","funders":"University of Toronto","keywords":"Vomiting; Meningitis; Streptococcus pneumoniae; Medicine; Emergency department; Neck pain; Pediatrics; Surgery; Alternative medicine; Psychiatry; Antibiotics; Pathology","score_opus":0.0067602204939494325,"score_gpt":0.22476889491683694,"score_spread":0.21800867442288752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049829039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923628,0.00040443183,0.000024595633,0.0022835059,0.0020799362,0.0000324333,0.000039344333,0.00000807837,0.002764858],"genre_scores_gemma":[0.9986849,0.000024804765,0.000016131811,0.0001096023,0.0004224534,0.0000016195876,0.000015145249,0.0000040304617,0.0007213026],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993143,0.000111730056,0.00027743776,0.000056529923,0.000033064116,0.00020691559],"domain_scores_gemma":[0.99944997,0.00006541822,0.00015091736,0.000039777293,0.00019309568,0.00010083963],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048032342,0.00005133334,0.000121298275,0.00010908282,0.00018321654,0.00001535394,0.000054559932,0.00025681563,0.008849933],"category_scores_gemma":[0.0002742707,0.000045574958,0.00005937334,0.00009669533,0.000020022337,0.000043298784,0.0000057509283,0.00033200672,0.000106649146],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022508433,0.00014454537,0.056593984,0.000010060297,0.00033054274,0.0013705774,0.000252005,0.0000028652782,0.011810186,0.004596002,0.7954759,0.12939084],"study_design_scores_gemma":[0.0011240398,0.00009889202,0.011844028,0.000033384717,0.000031207222,0.029134907,0.00013428148,0.0000053360527,0.0013488607,0.0003017435,0.95583075,0.00011259082],"about_ca_topic_score_codex":0.021236865,"about_ca_topic_score_gemma":0.08090793,"teacher_disagreement_score":0.16035484,"about_ca_system_score_codex":0.00018368241,"about_ca_system_score_gemma":0.0005017703,"threshold_uncertainty_score":0.99205613},"labels":[],"label_agreement":null},{"id":"W2050184371","doi":"10.1097/rmr.0000000000000024","title":"Congenital Brain Infections","year":2014,"lang":"en","type":"review","venue":"Topics in Magnetic Resonance Imaging","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Medicine; Pediatrics; Central nervous system; Intensive care medicine; Antibiotics; Internal medicine; Biology","score_opus":0.019106611943983668,"score_gpt":0.30359820480691685,"score_spread":0.2844915928629332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050184371","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025575233,0.99435145,0.000025376623,0.0001858524,0.002141908,0.00037802986,0.000022893513,0.00007314581,0.0025655762],"genre_scores_gemma":[0.00010527194,0.98960555,0.00003986905,0.00006155869,0.00026983052,0.00014986235,0.000065961336,0.00003795355,0.009664157],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99819905,0.00042964602,0.0005836253,0.00039267252,0.000015088951,0.00037992132],"domain_scores_gemma":[0.99902964,0.00036123634,0.00014413918,0.00040862407,0.00003937085,0.000016977929],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003455584,0.00032373468,0.00095326,0.00027591415,0.00012418222,0.000051881158,0.00023738739,0.00028722562,0.0010815186],"category_scores_gemma":[0.0002477284,0.00029136616,0.00022679938,0.00028461425,0.00012215688,0.00006698773,0.0001190269,0.0006183018,0.00056970736],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000034884065,0.00004142173,0.0003512089,0.00039456354,0.000009357732,0.0000027340113,0.000021214344,7.445185e-8,0.000019556557,0.0005307016,0.0024377236,0.996188],"study_design_scores_gemma":[0.00035265982,0.000058654972,0.0007291917,0.0013880641,0.00007871284,0.00019758676,0.0000050354074,0.000001936367,0.0000020779728,0.00011292379,0.99678147,0.00029169724],"about_ca_topic_score_codex":0.00015174528,"about_ca_topic_score_gemma":0.0000805942,"teacher_disagreement_score":0.9958963,"about_ca_system_score_codex":0.000082699225,"about_ca_system_score_gemma":0.00010136937,"threshold_uncertainty_score":0.99995387},"labels":[],"label_agreement":null},{"id":"W2050186163","doi":"10.1371/journal.pone.0119271","title":"Pertussis Post-Exposure Prophylaxis among Household Contacts: A Cost-Utility Analysis","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; University of Toronto; Public Health Ontario; University of Ottawa; Institute for Clinical Evaluative Sciences; Children's Hospital of Eastern Ontario","funders":"","keywords":"Medicine; Azithromycin; Quality-adjusted life year; Pediatrics; Cost effectiveness; Clarithromycin; Cost-effectiveness analysis; Chemoprophylaxis; Internal medicine; Antibiotics","score_opus":0.07711165861033227,"score_gpt":0.23202789014216232,"score_spread":0.15491623153183004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050186163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752086,0.00053882605,0.000025126174,0.00020832577,0.00021395269,0.0004139827,0.00019790007,0.00018172388,0.0006992822],"genre_scores_gemma":[0.99754095,0.000026229087,0.000056912915,0.00008173616,0.00006521675,0.00008347444,0.0002535724,0.000016754837,0.0018751501],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988269,0.00020902632,0.00029971232,0.00032400602,0.0000367694,0.00030357152],"domain_scores_gemma":[0.99891514,0.000065539585,0.000117698364,0.00045387077,0.00037711087,0.00007062367],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002573058,0.00018218148,0.00049309013,0.00020837097,0.00015226325,0.00004072028,0.0001550407,0.00029809334,0.0009245581],"category_scores_gemma":[0.00031883974,0.00014851232,0.00016059766,0.00049384765,0.000098705386,0.00017331746,0.00007487288,0.00027171936,0.00023115914],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033806713,0.0025316563,0.7037536,0.000027295207,0.004927729,0.000002298628,0.00043441984,0.0000024554392,0.2863266,0.000029611812,0.00071540993,0.0009108642],"study_design_scores_gemma":[0.0020915768,0.0013249428,0.90177214,0.000039181494,0.0025854923,0.000006670451,0.00037666684,0.00002207998,0.087567106,0.000027544693,0.0037811492,0.00040546848],"about_ca_topic_score_codex":0.0016496716,"about_ca_topic_score_gemma":0.00087553996,"teacher_disagreement_score":0.19875948,"about_ca_system_score_codex":0.000052594743,"about_ca_system_score_gemma":0.000060807015,"threshold_uncertainty_score":0.99998873},"labels":[],"label_agreement":null},{"id":"W2050704917","doi":"10.1128/mbio.00297-11","title":"A Bilayer-Couple Model of Bacterial Outer Membrane Vesicle Biogenesis","year":2012,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":216,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Cystic Fibrosis Canada","keywords":"Bacterial outer membrane; Vesicle; Membrane curvature; Biogenesis; Membrane; Biophysics; Lipid bilayer; Inner membrane; Chemistry; Cell biology; Bilayer; Biology; Biochemistry; Escherichia coli","score_opus":0.026188810929820547,"score_gpt":0.23960746160429927,"score_spread":0.21341865067447874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050704917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728996,0.00030354154,0.0001294744,0.00006787489,0.0016006762,0.00008779171,0.00009785302,0.00004909019,0.0003737349],"genre_scores_gemma":[0.9985821,0.000025790387,0.00015810561,0.000031259908,0.0001467871,0.000011551313,0.00006971958,0.000012576163,0.00096208614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999397,0.00003663597,0.00019538519,0.00011217135,0.000008730938,0.00025007935],"domain_scores_gemma":[0.9996501,0.00002155575,0.00006671786,0.00020273666,0.000038154423,0.000020700822],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011667144,0.00010380362,0.00019106966,0.00006361337,0.00007085768,0.0000066134035,0.00008467624,0.00015864932,0.0019810176],"category_scores_gemma":[0.000013195555,0.00008549635,0.000081763304,0.000079072866,0.000045109115,0.0001264729,0.00005018763,0.00005284377,0.00033899883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090409594,0.00017374009,0.0033346924,0.000009249458,0.00006204835,4.268947e-8,0.00018381534,0.000004781876,0.99358076,0.0002194457,0.0013637468,0.0009772812],"study_design_scores_gemma":[0.0006684898,0.000055246477,0.004184697,0.000005390214,0.000040463285,0.000012752955,0.000021901062,0.00002531707,0.9744211,0.00001978189,0.020428406,0.000116469055],"about_ca_topic_score_codex":0.00020344675,"about_ca_topic_score_gemma":0.00001761469,"teacher_disagreement_score":0.019159662,"about_ca_system_score_codex":0.000010483326,"about_ca_system_score_gemma":0.000017770444,"threshold_uncertainty_score":0.9989313},"labels":[],"label_agreement":null},{"id":"W2051010713","doi":"10.1016/j.vaccine.2008.04.089","title":"Predicted long-term persistence of pertussis antibodies in adolescents after an adolescent and adult formulation combined tetanus, diphtheria, and 5-component acellular pertussis vaccine, based on mathematical modeling and 5-year observed data","year":2008,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Pertactin; Filamentous haemagglutinin adhesin; Tetanus; Diphtheria; Medicine; Pertussis toxin; Vaccination; Booster dose; Vaccination schedule; Whooping cough; Immunology; Antibody; Bordetella pertussis; Pediatrics; Immunization; Internal medicine; Biology","score_opus":0.04387198835279312,"score_gpt":0.2442665689798618,"score_spread":0.20039458062706866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051010713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980703,0.000850596,0.00028606065,0.0001649112,0.00007179086,0.0004157751,0.00010472772,0.000031583928,0.00000427836],"genre_scores_gemma":[0.9986216,0.00050436985,0.00027306093,0.00003815179,0.000023630533,0.000009914794,0.00048169773,0.000022957518,0.000024643927],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986061,0.0001365734,0.0004717065,0.0004884644,0.000043583794,0.00025357647],"domain_scores_gemma":[0.99918514,0.000040085248,0.00011586725,0.0004994705,0.00010094088,0.00005847939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015976923,0.00026548622,0.0004796305,0.00018231188,0.00014930833,0.000021997432,0.00014372534,0.00019120889,0.00012804792],"category_scores_gemma":[0.000074830044,0.00021076243,0.000037901627,0.000115734074,0.000028922135,0.00027706157,0.00016784998,0.00017824271,0.0000026854873],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029915404,0.0009530354,0.9232653,0.00040877823,0.00006905846,0.000006399297,0.00034314406,0.000036154834,0.071064465,0.0000136804565,0.000013208944,0.00083524064],"study_design_scores_gemma":[0.0053104577,0.00053161656,0.9479269,0.0007460997,0.00009923957,0.00005005096,0.00010148162,0.043447535,0.001531341,0.000012493065,0.00000912291,0.00023370176],"about_ca_topic_score_codex":0.00009958117,"about_ca_topic_score_gemma":0.00008556219,"teacher_disagreement_score":0.069533125,"about_ca_system_score_codex":0.000021067559,"about_ca_system_score_gemma":0.000021736672,"threshold_uncertainty_score":0.8594642},"labels":[],"label_agreement":null},{"id":"W2051227659","doi":"10.1016/j.ijid.2012.05.1004","title":"Epidemiology and prevention of meningococcal disease: a critical appraisal of vaccine policies","year":2012,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Medicine; Vaccination; Meningococcal vaccine; Epidemiology; Vaccination policy; Outbreak; Notifiable disease; Herd immunity; Incidence (geometry); Environmental health; Immunization; Vaccination schedule; Disease; Conjugate vaccine; Pediatrics; Neisseria meningitidis; Immunology; Virology; Population","score_opus":0.020513947533925346,"score_gpt":0.3607489140250478,"score_spread":0.34023496649112245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051227659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98908097,0.0064510065,0.0010033271,0.0004013482,0.0028564886,0.00004903039,0.000074303265,0.000009735335,0.00007378508],"genre_scores_gemma":[0.99922013,0.00026697895,0.00005811274,0.000025850277,0.00037797441,0.000004186164,0.000017527786,0.000006919378,0.000022345363],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886876,0.00023460896,0.00062931626,0.0000735992,0.000034440236,0.0001592915],"domain_scores_gemma":[0.9978145,0.0010975447,0.0004748392,0.000072890965,0.00046569188,0.00007453256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003038915,0.00010183427,0.00034393265,0.00024296205,0.000038720293,0.000004181991,0.00010882617,0.0000745186,0.00036796808],"category_scores_gemma":[0.0031549616,0.00008165325,0.00018145618,0.00006026191,0.00014596632,0.00025956114,0.000065121545,0.00011047857,0.0000039639],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005611077,0.00076084136,0.9507577,0.0000388654,0.0005250623,9.174651e-7,0.00013629402,0.000012275773,0.03040557,0.013507235,0.00076027005,0.0025338798],"study_design_scores_gemma":[0.0013940228,0.000429271,0.98891604,0.00012161693,0.00025093672,0.00039811086,0.00008456059,0.000002833162,0.0034149692,0.0023535518,0.0025434156,0.00009064421],"about_ca_topic_score_codex":0.000052409818,"about_ca_topic_score_gemma":0.00000329068,"teacher_disagreement_score":0.038158387,"about_ca_system_score_codex":0.000022282851,"about_ca_system_score_gemma":0.000058103506,"threshold_uncertainty_score":0.40289924},"labels":[],"label_agreement":null},{"id":"W2052320243","doi":"10.1016/s0140-6736(00)02712-4","title":"Recombinant bactericidal/permeability-increasing protein (rBPI21) as adjunctive treatment for children with severe meningococcal sepsis: a randomised trial","year":2000,"lang":"en","type":"article","venue":"The Lancet","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":417,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Meningococcal disease; Placebo; Sepsis; Purpura fulminans; Internal medicine; Adjunctive treatment; Immunology; Neisseria meningitidis; Surgery; Pathology","score_opus":0.01944572114470641,"score_gpt":0.25907308515665706,"score_spread":0.23962736401195064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052320243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99342793,0.00011380696,0.000009098943,0.0009928207,0.00027135736,0.00411296,0.000087498454,0.00011741685,0.0008670892],"genre_scores_gemma":[0.9950604,0.000039379265,0.00012686044,0.000091599984,0.0005176898,0.0015063158,0.00019293895,0.000026525655,0.002438318],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9985323,0.00048433148,0.00025625448,0.00031836776,0.000016502323,0.00039225633],"domain_scores_gemma":[0.9991976,0.00020084991,0.00010627387,0.00042611134,0.000046412617,0.000022737655],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004098476,0.00024497378,0.0006290633,0.00003009078,0.0003995866,0.00004520072,0.00016873139,0.00014026633,0.0014093496],"category_scores_gemma":[0.00006590022,0.00012895053,0.0001556553,0.00009730217,0.00009388074,0.00008216697,0.000017937282,0.00014686542,0.00009756547],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.8766245,0.00079094124,0.002171272,0.000013926264,0.0015086057,8.3630835e-7,0.0007256154,0.000008295537,0.079778776,0.00018729059,0.0016272081,0.036562685],"study_design_scores_gemma":[0.84171355,0.0097336,0.04464476,0.00013958878,0.0006044833,0.00048322848,0.00012209963,0.000006474728,0.028875278,0.00068175717,0.07235646,0.00063869316],"about_ca_topic_score_codex":0.0009857228,"about_ca_topic_score_gemma":0.00008283888,"teacher_disagreement_score":0.070729256,"about_ca_system_score_codex":0.00007655367,"about_ca_system_score_gemma":0.000077592216,"threshold_uncertainty_score":0.9995035},"labels":[],"label_agreement":null},{"id":"W2053240723","doi":"10.1074/jbc.m808831200","title":"Structural Basis for the Immunogenic Properties of the Meningococcal Vaccine Candidate LP2086","year":2008,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Subfamily; Bacterial outer membrane; Neisseria meningitidis; Lipid bilayer; Recombinant DNA; Antibody; Biology; Neisseria; Linker; Antigen; Peptide sequence; Vesicle; Chemistry; Biochemistry; Membrane; Genetics; Bacteria; Gene; Escherichia coli","score_opus":0.03228482298691214,"score_gpt":0.2366287222197379,"score_spread":0.20434389923282575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053240723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953519,0.0034020443,0.000008149198,0.000536821,0.00055142224,0.00010420173,0.000017887285,0.000005897898,0.000021642943],"genre_scores_gemma":[0.99917316,0.00026819188,0.000020235655,0.000030135941,0.00017190642,0.0000067637507,0.000002826057,0.0000043903774,0.00032237833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928933,0.000053255586,0.0004020105,0.00008270715,0.000017005626,0.00015565874],"domain_scores_gemma":[0.99919015,0.0001155542,0.00035604602,0.00015694447,0.00016853426,0.000012782137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017669416,0.00010988121,0.00026004692,0.000009997646,0.0002908918,0.000005986359,0.00032916985,0.00017399015,0.00032655022],"category_scores_gemma":[0.00026119305,0.000041414994,0.0002745176,0.00007179879,0.00017567676,0.00003297171,0.00007729883,0.00025794865,0.0000014087943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044903473,0.000027013135,0.008325588,0.000011017765,0.00018999593,2.9655297e-7,0.000054531534,0.0000039180804,0.9900782,0.00000536568,0.000572014,0.00028300344],"study_design_scores_gemma":[0.0007609206,0.00013830728,0.048376713,0.00002759853,0.00005105628,0.00077559677,0.0000790298,0.000002243641,0.94464016,0.000023154487,0.0050597964,0.00006545251],"about_ca_topic_score_codex":0.000025938993,"about_ca_topic_score_gemma":0.0000013574908,"teacher_disagreement_score":0.04543809,"about_ca_system_score_codex":0.000021828917,"about_ca_system_score_gemma":0.000060028826,"threshold_uncertainty_score":0.35754958},"labels":[],"label_agreement":null},{"id":"W2053586261","doi":"10.1097/01.inf.0000160930.00964.47","title":"Summary","year":2005,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.021424154513652423,"score_gpt":0.29260573202138174,"score_spread":0.2711815775077293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053586261","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000490119,0.9915708,0.000011789282,0.000047846224,0.006364656,0.00040294387,0.000096381315,0.00012086318,0.00089465856],"genre_scores_gemma":[0.00014434182,0.9889629,0.0000020003633,0.000034689994,0.0077515594,0.000059214828,0.000066671055,0.000062066785,0.002916579],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977049,0.0007365587,0.000761375,0.00025981342,0.000034957047,0.0005023901],"domain_scores_gemma":[0.99826324,0.00037538947,0.00069893425,0.0004382267,0.00011099736,0.00011319667],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0004740978,0.00048329978,0.0009661707,0.00040671893,0.0010436808,0.0001440417,0.00044036156,0.00039399223,0.0024270674],"category_scores_gemma":[0.00013010352,0.0002735059,0.0010965285,0.00043206674,0.000070842274,0.00013435191,0.00014285426,0.0016394991,0.00271635],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019053568,0.00021301892,0.00040890084,0.00077245897,0.00047436354,0.00001038677,0.000016456224,0.000002338473,3.9048422e-7,0.00007052574,0.057956513,0.9400556],"study_design_scores_gemma":[0.00033773354,0.000048526847,0.00007200334,0.0003004649,0.004823303,0.0073964368,0.0000029288392,8.581769e-8,3.7771557e-8,0.00011482224,0.986581,0.0003226072],"about_ca_topic_score_codex":0.00001508779,"about_ca_topic_score_gemma":0.00000487334,"teacher_disagreement_score":0.93973297,"about_ca_system_score_codex":0.00016792561,"about_ca_system_score_gemma":0.00075490365,"threshold_uncertainty_score":0.9999717},"labels":[],"label_agreement":null},{"id":"W2054071331","doi":"10.1016/j.jinf.2015.04.012","title":"Pediatric intracranial abscesses","year":2015,"lang":"en","type":"review","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"","keywords":"Medicine; Vomiting; Abscess; Brain abscess; Nausea; Lesion; Empyema; Surgery; Subdural empyema; Epidural abscess; Radiology","score_opus":0.04381036077142943,"score_gpt":0.3345694846640825,"score_spread":0.29075912389265307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054071331","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027663026,0.9851309,0.000057395053,0.000006092663,0.011641655,0.00012691646,0.000010306614,0.000023181181,0.00023727187],"genre_scores_gemma":[0.00014749159,0.9970643,0.000014931261,0.000002867496,0.0024944271,0.000004749813,0.000023769178,0.000022476663,0.0002249657],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986264,0.00025171132,0.0008399425,0.00010811325,0.000022322782,0.00015147756],"domain_scores_gemma":[0.99805826,0.00009244442,0.0013022606,0.000115961986,0.00040263726,0.000028442011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053528853,0.0002257142,0.0011245162,0.0005215079,0.00008207686,0.000035115136,0.0000982927,0.0005591492,0.00048515416],"category_scores_gemma":[0.00015715067,0.00015397357,0.0004943523,0.00032488845,0.000020900927,0.00019666628,0.000030732164,0.00069668796,0.00042396385],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002136889,0.00015583193,0.00015860549,0.0018053807,0.00033747178,0.000005484119,0.000014162332,7.486949e-7,0.000031663887,0.000021064592,0.018550538,0.9788977],"study_design_scores_gemma":[0.00033910322,0.00033233708,0.00008668324,0.00066167745,0.0013370598,0.0039302097,0.0000015567249,1.6755301e-8,0.0000058210057,0.000033181193,0.993129,0.00014334581],"about_ca_topic_score_codex":0.000039733033,"about_ca_topic_score_gemma":0.000008020143,"teacher_disagreement_score":0.97875434,"about_ca_system_score_codex":0.000117984266,"about_ca_system_score_gemma":0.000401208,"threshold_uncertainty_score":0.627886},"labels":[],"label_agreement":null},{"id":"W2054922301","doi":"10.1016/j.vaccine.2010.11.053","title":"Safety and immunogenicity of three different formulations of a liquid hexavalent diphtheria–tetanus–acellular pertussis–inactivated poliovirus–Haemophilus influenzae b conjugate–hepatitis B vaccine at 2, 4, 6 and 12–14 months of age","year":2010,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Izaak Walton Killam Health Centre; Dalhousie University; Children's Hospital of Eastern Ontario","funders":"Merck","keywords":"Medicine; Tetanus; Diphtheria; Immunogenicity; Vaccination; Hepatitis B; Toxoid; Hepatitis A vaccine; Conjugate vaccine; Immunology; Virology; Antigen","score_opus":0.011435536752115352,"score_gpt":0.22646661974356086,"score_spread":0.21503108299144552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054922301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961974,0.002169792,0.00006809408,0.00015757626,0.00041087292,0.0005380758,0.00033722966,0.000035295234,0.00008565052],"genre_scores_gemma":[0.99824077,0.0013201976,0.00006510573,0.000014594968,0.000037264603,0.000011340927,0.00013132309,0.000029677945,0.00014974982],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99832183,0.00010582732,0.00091735204,0.00032289946,0.000040462764,0.00029164317],"domain_scores_gemma":[0.99849904,0.0001909484,0.00053362915,0.00051518605,0.0002070709,0.000054118565],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018933865,0.0003212469,0.000903657,0.00021643793,0.00019653037,0.000008103716,0.00015378943,0.00034199856,0.00082848914],"category_scores_gemma":[0.000116375806,0.00025219645,0.0001453941,0.00017506548,0.00007988801,0.0001376158,0.00028719072,0.0002615306,0.0000036158158],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031202836,0.00027423102,0.12997663,0.00009047745,0.00045047372,0.0000011198507,0.00023931797,0.0000033807692,0.8646364,0.000580324,0.000030987543,0.0005963643],"study_design_scores_gemma":[0.0038426179,0.00075149385,0.5180311,0.00005332246,0.00016648327,0.00005074124,0.000015094184,0.000018027567,0.4751758,0.00010625076,0.0016208282,0.0001682152],"about_ca_topic_score_codex":0.0046518506,"about_ca_topic_score_gemma":0.0051376172,"teacher_disagreement_score":0.38946062,"about_ca_system_score_codex":0.000032114694,"about_ca_system_score_gemma":0.000028852688,"threshold_uncertainty_score":0.999993},"labels":[],"label_agreement":null},{"id":"W2055179152","doi":"10.1542/peds.2004-2509","title":"Pertussis in Adolescents and Adults: Should We Vaccinate?","year":2005,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Agency for Healthcare Research and Quality","keywords":"Medicine; Vaccination; Pertussis vaccine; Pediatrics; Incidence (geometry); Adverse effect; Environmental health; Immunology; Immunization; Immune system; Internal medicine","score_opus":0.01354153198434318,"score_gpt":0.24481759539738973,"score_spread":0.23127606341304655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055179152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99073243,0.007446809,0.0000093197,0.0009612185,0.0005216921,0.00009620174,0.000011024118,0.000042498268,0.00017882838],"genre_scores_gemma":[0.99539304,0.003854715,0.000033521606,0.000093805225,0.00022867839,0.00000865623,0.000010276061,0.000009111283,0.00036817795],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99940115,0.00003990773,0.0001731815,0.00017461611,0.000008661788,0.00020245262],"domain_scores_gemma":[0.9997852,0.000025591207,0.00003997568,0.0001042014,0.000027335955,0.00001772399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000080460064,0.000102300095,0.0001335078,0.00014881407,0.000065956454,0.0000131195475,0.0000635707,0.00018176124,0.00022033155],"category_scores_gemma":[0.000044530905,0.0000874791,0.000028238164,0.00016860155,0.000012544013,0.00009923035,0.00005319876,0.00018465007,0.00018679081],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017991906,0.00037985557,0.8770201,0.000098831624,0.000014236023,0.0000014717895,0.0005523519,0.0000043931345,0.0070665656,0.00014001504,0.0062269517,0.10831531],"study_design_scores_gemma":[0.0037308794,0.00014230696,0.8364753,0.000060942457,0.000054234388,0.000053803655,0.00020747425,0.000030243777,0.0015563006,0.000065558415,0.15726596,0.0003569973],"about_ca_topic_score_codex":0.0001526268,"about_ca_topic_score_gemma":0.00031971818,"teacher_disagreement_score":0.151039,"about_ca_system_score_codex":0.000023763256,"about_ca_system_score_gemma":0.000014449155,"threshold_uncertainty_score":0.35672942},"labels":[],"label_agreement":null},{"id":"W2055297074","doi":"10.2310/7060.2002.22452","title":"Epidemic Meningococcal Disease and Travel","year":2002,"lang":"en","type":"review","venue":"Journal of Travel Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; BC Research (Canada)","funders":"International Society of Travel Medicine; Pediatric Infectious Diseases Society; Pfizer","keywords":"Medicine; Meningococcal disease; Travel medicine; Disease; Meningococcal Infections; Virology; Meningococcal vaccine; Intensive care medicine; Neisseria meningitidis; Immunology; Immunization; Internal medicine; Antibody; Psychiatry","score_opus":0.06505055535892934,"score_gpt":0.3348166221933768,"score_spread":0.2697660668344475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055297074","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017801898,0.9964527,0.00009309304,0.00042822622,0.0023959917,0.00021588513,0.000027697773,0.0000073424508,0.00020106419],"genre_scores_gemma":[0.0002898712,0.9968503,0.000022680168,0.00004755768,0.0011139477,0.0000066631305,0.000037546204,0.00003072649,0.0016007101],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979506,0.00028833453,0.001277288,0.00019750885,0.00003273152,0.00025350988],"domain_scores_gemma":[0.99819213,0.00038552604,0.0009984418,0.00018486452,0.00010638595,0.0001326501],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005834639,0.00035998816,0.0023436577,0.00040551674,0.00009592046,0.000008369841,0.00020296381,0.00037785486,0.0011686641],"category_scores_gemma":[0.00037498356,0.00021102098,0.00035476938,0.00015115393,0.00020634575,0.00007070198,0.000032416985,0.0009022279,0.00005732555],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007361253,0.00011961642,0.0000215731,0.0030827143,0.0010800693,0.000046950314,0.00014157727,4.4684743e-8,0.001101273,0.00020445172,0.026678205,0.9674499],"study_design_scores_gemma":[0.0012743343,0.00046675754,0.00043688543,0.011368206,0.003178748,0.0035615035,0.00003934272,3.0310113e-7,0.000004487688,0.000052563923,0.9794212,0.0001956967],"about_ca_topic_score_codex":0.000013945373,"about_ca_topic_score_gemma":0.000001078007,"teacher_disagreement_score":0.9672542,"about_ca_system_score_codex":0.000046179197,"about_ca_system_score_gemma":0.0001066602,"threshold_uncertainty_score":0.9997444},"labels":[],"label_agreement":null},{"id":"W2055934782","doi":"10.1016/j.vaccine.2010.01.040","title":"Modified binding assay for improved sensitivity and specificity in the detection of residual pertussis toxin in vaccine preparations","year":2010,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Pertussis toxin; Polyclonal antibodies; Monoclonal antibody; Toxoid; Pertussis vaccine; Toxin; Diphtheria toxin; Antibody; In vivo; Microbiology; Chemistry; Virology; Biology; Immunology; Immunization; G protein; Biochemistry; Receptor","score_opus":0.01649805917309217,"score_gpt":0.2581087167396546,"score_spread":0.24161065756656241,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055934782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978506,0.00007330071,0.00040501225,0.00065052655,0.00042696414,0.00048688645,0.00004806029,0.000017708753,0.000040922423],"genre_scores_gemma":[0.9996208,0.000033175937,0.00007356203,0.000016681644,0.000076695644,0.000033429256,0.000042619748,0.0000075522858,0.00009549734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916995,0.00015296861,0.00029524078,0.00020212588,0.000008813044,0.00017088267],"domain_scores_gemma":[0.9991973,0.00044287383,0.000098675744,0.00019693213,0.00005543882,0.000008756778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009306865,0.00011025777,0.0002260069,0.00019094688,0.00012175188,0.000014918837,0.000055196924,0.00018528561,0.00003878072],"category_scores_gemma":[0.0002792894,0.00007905926,0.00003722006,0.00022004975,0.000008865024,0.00010285419,0.000029814726,0.00025583646,0.0000023039634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035210216,0.00013321191,0.0074365577,0.000009989932,0.000016992703,1.9783913e-7,0.00021937925,0.0000062065265,0.98802626,0.00021480588,0.00008561134,0.003498692],"study_design_scores_gemma":[0.0030015863,0.00024957967,0.42126855,0.000014391445,0.000030593066,0.000053587377,0.0002183422,0.0005704949,0.57181835,0.00013215907,0.0025020908,0.00014026494],"about_ca_topic_score_codex":0.0008539357,"about_ca_topic_score_gemma":0.03035998,"teacher_disagreement_score":0.4162079,"about_ca_system_score_codex":0.000014004747,"about_ca_system_score_gemma":0.00001695269,"threshold_uncertainty_score":0.9873334},"labels":[],"label_agreement":null},{"id":"W2056092394","doi":"10.1128/jb.00605-06","title":"Expression of the Primary Carbohydrate Component of the <i>Bordetella bronchiseptica</i> Biofilm Matrix Is Dependent on Growth Phase but Independent of Bvg Regulation","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; University of Washington; U.S. Department of Energy","keywords":"Bordetella bronchiseptica; Biofilm; Biology; Virulence; Microbiology; Xylose; Bacteria; Gene; Biochemistry; Genetics; Fermentation","score_opus":0.008126622801040357,"score_gpt":0.23369705615701758,"score_spread":0.22557043335597723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056092394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971187,0.0003551461,0.00004134119,0.00030955495,0.0016964962,0.00019695124,0.00007979774,0.0000040159225,0.0001979692],"genre_scores_gemma":[0.9995126,0.00007740359,0.000045812387,0.00004370098,0.00009571704,0.0000021491132,0.000012622399,0.000011662919,0.00019831078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981011,0.00048326742,0.0010389715,0.00013962913,0.00006439745,0.00017263324],"domain_scores_gemma":[0.997505,0.00013547052,0.0017429248,0.00033296793,0.00026765332,0.000015976582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032616922,0.00016477072,0.0005394941,0.00014379912,0.00009524842,0.000004981798,0.0003408567,0.00027159054,0.00023624409],"category_scores_gemma":[0.000036871483,0.00009082038,0.00030217,0.00013027835,0.00023223787,0.0000677949,0.00014163902,0.00032051097,0.0000033915178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008625007,0.00052286714,0.008219848,0.000037713977,0.00009250431,5.0721485e-7,0.00007611851,0.00005368251,0.9891866,0.00021635064,0.0004944728,0.00023684396],"study_design_scores_gemma":[0.0019243127,0.00057351316,0.20182006,0.00011560213,0.00008744893,0.00011334186,0.000023137154,0.0000020438472,0.79439026,0.00019355366,0.00068873726,0.00006799556],"about_ca_topic_score_codex":0.00022556244,"about_ca_topic_score_gemma":0.000014617804,"teacher_disagreement_score":0.19479632,"about_ca_system_score_codex":0.000054371903,"about_ca_system_score_gemma":0.00010110382,"threshold_uncertainty_score":0.37035474},"labels":[],"label_agreement":null},{"id":"W2056777116","doi":"10.1007/s11910-015-0524-6","title":"Invasive Meningococcal Disease in the 21st Century—An Update for the Clinician","year":2015,"lang":"en","type":"review","venue":"Current Neurology and Neuroscience Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Meningococcal vaccine; Medicine; Epidemiology; Outbreak; Disease; Meningitis; Bacteremia; Intensive care medicine; Immunology; Asplenia; Virology; Pediatrics; Immunization; Biology; Antibiotics; Microbiology; Internal medicine; Immune system","score_opus":0.10977552592962188,"score_gpt":0.3837979719573067,"score_spread":0.27402244602768483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056777116","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005833722,0.979598,0.0000043828136,0.00042721603,0.012392074,0.0016271839,0.000068509544,0.000031837215,0.000017069788],"genre_scores_gemma":[0.008090988,0.99068,4.1125327e-7,0.00039804977,0.00021391259,0.0004474271,0.000132979,0.00001985692,0.000016420934],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969573,0.00094023196,0.0007288826,0.0008626716,0.000036861336,0.00047405172],"domain_scores_gemma":[0.9978849,0.00071673834,0.0005695986,0.00069874665,0.00005872349,0.00007128868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012581416,0.00035989282,0.0007401049,0.00014261527,0.00055635214,0.000076464574,0.0004873287,0.00026016976,0.000011965712],"category_scores_gemma":[0.00071389053,0.00018563574,0.00022150514,0.00029903968,0.0005881143,0.00014569637,0.00019635909,0.0008901026,0.000008826146],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014430971,0.0006621905,0.0013423436,0.0009208417,0.000027452092,0.00012548537,0.00019741972,0.0000036314548,0.00008934122,0.0013504059,0.0020434337,0.99309313],"study_design_scores_gemma":[0.00017021528,0.00030732265,0.000837146,0.00011813173,0.00028810644,0.001211566,0.0000125395045,0.0000021069889,0.0000012485602,0.00014504581,0.9967261,0.00018048055],"about_ca_topic_score_codex":0.000011226019,"about_ca_topic_score_gemma":0.000030274681,"teacher_disagreement_score":0.99468267,"about_ca_system_score_codex":0.00000873513,"about_ca_system_score_gemma":0.00038727056,"threshold_uncertainty_score":0.75700057},"labels":[],"label_agreement":null},{"id":"W2057016943","doi":"10.1016/j.vaccine.2014.07.096","title":"Economic evaluation of meningococcal serogroup B childhood vaccination in Ontario, Canada","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; Institute for Clinical Evaluative Sciences; Canada Research Chairs; St. Michael's Hospital; Hospital for Sick Children; Public Health Ontario; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Vaccination; Cohort; Cost effectiveness; Case fatality rate; Meningococcal disease; Pediatrics; Incidence (geometry); Quality-adjusted life year; Demography; Vaccine efficacy; Environmental health; Neisseria meningitidis; Population; Virology; Internal medicine; Biology","score_opus":0.010009294903606901,"score_gpt":0.22684988280173404,"score_spread":0.21684058789812713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057016943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99748015,0.00008791865,0.000012002397,0.00013264427,0.0008874417,0.00019991287,0.0000050424705,0.000012397683,0.0011824886],"genre_scores_gemma":[0.99962896,0.0000034224752,0.000015193437,0.000017797309,0.000038061837,0.00001417021,0.00011673671,0.000007184838,0.00015846232],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992472,0.00014037809,0.00029250415,0.00015864572,0.000016855418,0.00014443522],"domain_scores_gemma":[0.9996005,0.00004513308,0.000114903574,0.00015823594,0.00007041858,0.000010790117],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00049236324,0.000095765296,0.00019914923,0.000099102996,0.00004429843,0.000004842618,0.0000760198,0.00009234305,0.004690289],"category_scores_gemma":[0.00004256632,0.00009024871,0.000027527256,0.000062067695,0.0000016982848,0.00007825036,0.0000254077,0.00012100015,0.000026420928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001698686,0.00031609487,0.8309947,0.00001502566,0.00017643697,1.5780662e-7,0.0005895654,0.0014550511,0.111709416,0.0015699097,0.0057788384,0.047224894],"study_design_scores_gemma":[0.002836483,0.000093307106,0.9700055,0.00001044467,0.000036845504,0.000008394218,0.000027507876,0.00013486885,0.014658561,0.000132906,0.011962339,0.000092850685],"about_ca_topic_score_codex":0.94285434,"about_ca_topic_score_gemma":0.9973202,"teacher_disagreement_score":0.13901074,"about_ca_system_score_codex":0.00039188235,"about_ca_system_score_gemma":0.00037419196,"threshold_uncertainty_score":0.9962196},"labels":[],"label_agreement":null},{"id":"W2057324449","doi":"10.1111/j.1479-828x.2006.00574.x","title":"Invasive <i>Haemophilus parainfluenzae</i> maternal–infant infections: An Australasian perspective and case report","year":2006,"lang":"en","type":"review","venue":"Australian and New Zealand Journal of Obstetrics and Gynaecology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ottawa Mental Health Centre","funders":"","keywords":"Haemophilus parainfluenzae; Haemophilus; Pregnancy; Medicine; Microbiology; Pediatrics; Biology; Bacteria","score_opus":0.0430766989392024,"score_gpt":0.3185556117891848,"score_spread":0.2754789128499824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057324449","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14513063,0.84977376,0.0000017020233,0.00016021529,0.0042614024,0.00040722822,0.00010506364,0.000020294392,0.00013967232],"genre_scores_gemma":[0.019878374,0.97463506,0.000058126723,0.000028674629,0.00024681413,0.000009742311,0.00006354348,0.000042987715,0.0050366456],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997478,0.0003079308,0.0012421265,0.0004835042,0.00003577076,0.00045267484],"domain_scores_gemma":[0.99705,0.00092258607,0.0013006697,0.0002375715,0.00025028526,0.0002389051],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036493494,0.0005348364,0.0017832307,0.0007571249,0.00030468052,0.00015333491,0.00012710514,0.0009757449,0.00023232089],"category_scores_gemma":[0.000526848,0.00040402074,0.00023767797,0.00032632714,0.00026189166,0.00027950548,0.00009172611,0.000927658,0.0000068216677],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004492718,0.00055463606,0.015062702,0.0015047844,0.0021267754,0.043240692,0.0005887993,0.000001508368,0.000041630756,0.00077584694,0.01130656,0.92475116],"study_design_scores_gemma":[0.0014897743,0.0013928695,0.006943955,0.00019578906,0.0010800541,0.31587505,0.00016509784,3.9671853e-8,0.000008284384,0.00031939012,0.67219216,0.00033753575],"about_ca_topic_score_codex":0.0017118781,"about_ca_topic_score_gemma":0.00030473372,"teacher_disagreement_score":0.9244136,"about_ca_system_score_codex":0.0001306739,"about_ca_system_score_gemma":0.0003651432,"threshold_uncertainty_score":0.99984115},"labels":[],"label_agreement":null},{"id":"W2057616280","doi":"10.1099/jmm.0.026914-0","title":"Invasive disease caused by Haemophilus influenzae type a in Northern Ontario First Nations communities","year":2010,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Agency of Canada; NOSM University","funders":"Public Health Agency of Canada","keywords":"Haemophilus influenzae; Epidemiology; Context (archaeology); Indigenous; Disease; Genotype; Antibiotics; Microbiology; Biology; Medicine; Ecology; Pathology; Genetics","score_opus":0.014578694348430992,"score_gpt":0.25104226392422807,"score_spread":0.2364635695757971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057616280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921703,0.0006856365,0.0000054785482,0.003898036,0.0030272342,0.00009714398,0.000034903424,0.000011012223,0.00007027786],"genre_scores_gemma":[0.99896514,0.00021262601,0.000011439423,0.00034898092,0.00011308845,0.0000046446685,0.00012453597,0.000010953593,0.00020860526],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99883884,0.00020333394,0.00057817093,0.000099916135,0.00002470479,0.00025502074],"domain_scores_gemma":[0.9985829,0.00063234736,0.00026812634,0.00018359063,0.00024171533,0.0000913432],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004426585,0.00014993887,0.0003694586,0.00027011766,0.00020332671,0.000014979815,0.00042252816,0.00048244518,0.0030300557],"category_scores_gemma":[0.0009187812,0.00011578033,0.00009673256,0.00016250012,0.0003269646,0.000090759,0.00011130195,0.0014205924,0.00010244241],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036810702,0.0006497487,0.41408652,0.000025435176,0.0002443872,0.00004033528,0.0016589572,0.0000049585856,0.5681606,0.0002661316,0.014152874,0.00034197752],"study_design_scores_gemma":[0.0060538747,0.000708367,0.13054961,0.00028282168,0.000106742016,0.0017688209,0.00048834697,7.707373e-7,0.005639236,0.00022897955,0.8538073,0.0003651389],"about_ca_topic_score_codex":0.010039215,"about_ca_topic_score_gemma":0.8951522,"teacher_disagreement_score":0.885113,"about_ca_system_score_codex":0.000085190935,"about_ca_system_score_gemma":0.00084880175,"threshold_uncertainty_score":0.9978813},"labels":[],"label_agreement":null},{"id":"W2057768165","doi":"10.1111/ene.12441","title":"Tumor necrosis factor α level in cerebrospinal fluid for bacterial and aseptic meningitis: a diagnostic meta‐analysis","year":2014,"lang":"en","type":"review","venue":"European Journal of Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Science Foundation of Shandong Province; Shandong University of Technology; Shandong University of Science and Technology","keywords":"Medicine; Aseptic meningitis; Confidence interval; Receiver operating characteristic; Diagnostic odds ratio; Internal medicine; Meningitis; Odds ratio; Cerebrospinal fluid; Likelihood ratios in diagnostic testing; Gastroenterology; Meta-analysis; Aseptic processing; Sepsis; Surgery","score_opus":0.09070097188289376,"score_gpt":0.30971042785137254,"score_spread":0.21900945596847876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057768165","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017781168,0.9783934,0.00035345004,0.00015394908,0.0023175678,0.0004959401,0.00045044435,0.000019451649,0.000034634697],"genre_scores_gemma":[0.021489698,0.9771315,0.00014931765,0.0001681738,0.0005953409,0.000042377178,0.0001361996,0.00012457487,0.00016282502],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99463075,0.0029142727,0.0015532611,0.00044492973,0.00002505116,0.00043175617],"domain_scores_gemma":[0.9963264,0.0018429268,0.0013539986,0.00027801908,0.00013022318,0.00006847131],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009004598,0.00051195914,0.0039647953,0.00092509214,0.00012238692,0.000066997934,0.00038800857,0.00020734305,0.00071706204],"category_scores_gemma":[0.0007646478,0.00037717275,0.0018248914,0.00031306702,0.0001308652,0.00009681238,0.00014279001,0.000737562,0.000059848495],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028228797,0.0013105224,0.00041901052,0.009651983,0.3945622,0.0011584635,0.00045999847,0.000029835224,0.011376097,0.00036754482,0.009020826,0.5688206],"study_design_scores_gemma":[0.0013022046,0.0023762695,0.001804167,0.00019165747,0.09088942,0.0024013508,0.0000015226736,6.3823666e-7,0.000013666078,0.000008487759,0.9006972,0.000313453],"about_ca_topic_score_codex":0.000017877344,"about_ca_topic_score_gemma":0.00003008583,"teacher_disagreement_score":0.89167637,"about_ca_system_score_codex":0.00001757218,"about_ca_system_score_gemma":0.000090341535,"threshold_uncertainty_score":0.99986804},"labels":[],"label_agreement":null},{"id":"W2057779329","doi":"10.1016/s0008-6215(02)00161-1","title":"Structural analysis of the lipopolysaccharide from Neisseria meningitidis strain BZ157 galE: localisation of two phosphoethanolamine residues in the inner core oligosaccharide","year":2002,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Chemistry; Heptose; Neisseria meningitidis; Lipopolysaccharide; Oligosaccharide; Residue (chemistry); Nuclear magnetic resonance spectroscopy; Monoclonal antibody; Strain (injury); Lipid A; Mass spectrometry; Stereochemistry; Biochemistry; Antibody; Bacteria; Chromatography","score_opus":0.08485709507925195,"score_gpt":0.3357517571766613,"score_spread":0.25089466209740935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057779329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976454,0.0009591333,0.0000034254685,0.00037804578,0.0002791028,0.00028396896,0.0003045457,0.000011599607,0.00013478285],"genre_scores_gemma":[0.99944293,0.0001331148,0.000007964731,0.000016323076,0.000050839193,0.000031367574,0.00014540134,0.0000120057,0.00016004001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997984,0.0007804433,0.00049920793,0.0002797521,0.0000920329,0.0003645724],"domain_scores_gemma":[0.99841845,0.0004930326,0.00017920339,0.0006324897,0.00025917668,0.000017638744],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008487489,0.00015468839,0.00039282657,0.0004593662,0.00019779848,0.000030428044,0.0005399346,0.00017099427,0.0015136952],"category_scores_gemma":[0.00026045053,0.000092527036,0.00015925926,0.0021095774,0.00038133463,0.00011027064,0.00013678946,0.0004972532,0.0000104253195],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005444274,0.000050269773,0.037907507,0.000008577894,0.00038480415,8.3610956e-7,0.0019327395,0.00012501456,0.9575268,0.0012384226,0.0001729757,0.0005975797],"study_design_scores_gemma":[0.00082951394,0.00010860814,0.1835061,0.00005105431,0.0002606213,0.0000037531063,0.001297776,0.0012732118,0.81141514,0.0010076117,0.00009843708,0.00014815474],"about_ca_topic_score_codex":0.016742669,"about_ca_topic_score_gemma":0.004858187,"teacher_disagreement_score":0.14611167,"about_ca_system_score_codex":0.00005018887,"about_ca_system_score_gemma":0.00004453242,"threshold_uncertainty_score":0.99939907},"labels":[],"label_agreement":null},{"id":"W2058918185","doi":"10.1139/w04-024","title":"Genetic analysis of Canadian isolates of C:2a:P1.2,5 and B:2a:P1.2,5<i>Neisseria meningitidis</i>strains belonging to the hypervirulent clone of ET-15","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Neisseria meningitidis; Biology; Operon; clone (Java method); Microbiology; Pulsed-field gel electrophoresis; Neisseria; Genetics; Gene; Neisseriaceae; Virology; Escherichia coli; Genotype; Bacteria","score_opus":0.010727299673271141,"score_gpt":0.21469266704467924,"score_spread":0.2039653673714081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058918185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992691,0.004141818,0.00006510603,0.0017070908,0.0006912468,0.0001475481,0.00048597707,0.0000028134668,0.00006742362],"genre_scores_gemma":[0.9990741,0.0002857239,0.00027839042,0.00021220156,0.00003572249,0.00000223803,0.000046960806,0.000015968513,0.000048665566],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983315,0.00019083753,0.0008208357,0.00019144776,0.00001038447,0.00045498114],"domain_scores_gemma":[0.9986823,0.00008419367,0.0004828391,0.00026033627,0.00028108552,0.000209196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043391014,0.00020227233,0.0007558057,0.0019632918,0.00016372054,0.000012213925,0.0003307428,0.00025332836,0.00044226283],"category_scores_gemma":[0.00009288181,0.00015944066,0.00023218765,0.0009317015,0.0002953647,0.0000558319,0.00003215162,0.0002633432,0.00000585764],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047517657,0.000027055723,0.01678312,0.00001727961,0.0015110465,0.000006216257,0.0014307841,0.00076292554,0.9779338,0.0003955113,0.0005162808,0.0005684545],"study_design_scores_gemma":[0.0038652245,0.0028923247,0.56441885,0.00041486384,0.0035389906,0.0034847576,0.0024950022,0.0000058682,0.33883885,0.00023311615,0.07897344,0.00083871646],"about_ca_topic_score_codex":0.35280347,"about_ca_topic_score_gemma":0.85586125,"teacher_disagreement_score":0.63909495,"about_ca_system_score_codex":0.00010033563,"about_ca_system_score_gemma":0.0011511985,"threshold_uncertainty_score":0.6515063},"labels":[],"label_agreement":null},{"id":"W2059210917","doi":"10.1074/jbc.m110.185744","title":"Selective Sorting of Cargo Proteins into Bacterial Membrane Vesicles","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":330,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Alberta Glycomics Centre; Fondation pour la Recherche Médicale; University of Alberta","keywords":"Bacterial outer membrane; Virulence; Vesicle; Cell biology; Porphyromonas gingivalis; Biology; Membrane protein; Cell membrane; Pathogen; Lipopolysaccharide; Membrane; Protein targeting; Microbiology; Bacteria; Biochemistry; Gene; Immunology; Escherichia coli; Genetics","score_opus":0.012741071320993178,"score_gpt":0.24497674101450637,"score_spread":0.2322356696935132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059210917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985027,0.00011405996,0.000011571557,0.00011132863,0.0006634728,0.000057755424,0.000006949661,0.000012885762,0.00051930256],"genre_scores_gemma":[0.99904543,0.000025471587,0.00029807113,0.0000069363514,0.0005429001,0.0000028731201,0.000010526089,0.000005288634,0.000062502295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914944,0.00005207822,0.00050786725,0.0001143443,0.000016297377,0.00015997332],"domain_scores_gemma":[0.99901533,0.000092726106,0.0005357295,0.00010094578,0.00022643611,0.000028841681],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028357422,0.00011699614,0.0003446144,0.000026554088,0.00007851693,0.000009558771,0.00017012026,0.00039160028,0.0014865951],"category_scores_gemma":[0.00042510484,0.00007619877,0.00015417943,0.00007187996,0.000154225,0.000058641934,0.000050496004,0.0005450204,0.000008476798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030134607,0.000114761475,0.0040078615,0.000024633056,0.000094117626,0.0000013066523,0.00005737832,3.7137713e-7,0.99394923,0.00002345077,0.00007418043,0.0013513613],"study_design_scores_gemma":[0.00065669534,0.00024933633,0.007123819,0.000020030035,0.000017428825,0.00022814497,0.00005236251,1.7992593e-7,0.9874832,0.00023711601,0.0038444134,0.00008724549],"about_ca_topic_score_codex":0.000021711821,"about_ca_topic_score_gemma":0.0000036854553,"teacher_disagreement_score":0.006466003,"about_ca_system_score_codex":0.000013866417,"about_ca_system_score_gemma":0.000066508714,"threshold_uncertainty_score":0.9994262},"labels":[],"label_agreement":null},{"id":"W2059265705","doi":"10.1016/j.biologicals.2012.09.008","title":"WHO/Health Canada meeting on regulatory considerations for evaluation and licensing of new meningococcal Group B vaccines, Ottawa, Canada, 3–4 October 2011","year":2012,"lang":"en","type":"article","venue":"Biologicals","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Canada","funders":"","keywords":"Immunogenicity; Neisseria meningitidis; Meningococcal vaccine; Standardization; Virology; Outbreak; Medicine; Biology; Antigen; Political science; Immunology; Bacteria; Genetics","score_opus":0.04348790936497547,"score_gpt":0.2869290772448645,"score_spread":0.243441167879889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059265705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935251,0.003284046,0.000020561902,0.0015032437,0.0009177754,0.00048393736,0.00007107651,0.000015624531,0.00017862102],"genre_scores_gemma":[0.9985441,0.000029524168,0.00023009683,0.00071071275,0.00016344081,0.000021621567,0.00009412364,0.000006896321,0.00019950712],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99888325,0.00024491182,0.0003656079,0.00018431382,0.000023888031,0.00029802616],"domain_scores_gemma":[0.9989126,0.00052005844,0.00022263407,0.00013501047,0.00015039602,0.000059329108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006969978,0.00013079801,0.00029677706,0.00003452479,0.00028394331,0.000006881162,0.000035829682,0.0001389571,0.0004289732],"category_scores_gemma":[0.00053710194,0.00009816081,0.000029431365,0.00003762826,0.000026686645,0.000046496687,0.000023949375,0.00008279135,0.0000016515213],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014804675,0.00012728189,0.052700385,0.00004147273,0.00021949086,1.6333514e-7,0.00021208287,0.000021460339,0.30688104,0.009003364,0.61438805,0.016257152],"study_design_scores_gemma":[0.00194527,0.00039986725,0.7728159,0.00006773186,0.00007337622,0.00003176946,0.00017493905,0.000015992107,0.019309886,0.00026690032,0.20460792,0.0002904793],"about_ca_topic_score_codex":0.9104099,"about_ca_topic_score_gemma":0.96061355,"teacher_disagreement_score":0.7201155,"about_ca_system_score_codex":0.00013417825,"about_ca_system_score_gemma":0.00072200526,"threshold_uncertainty_score":0.46969557},"labels":[],"label_agreement":null},{"id":"W2059992149","doi":"10.1007/s00232-002-1008-6","title":"Altered Channel Properties of Porins from Haemophilus influenzae: Isolates from Cystic Fibrosis Patients","year":2002,"lang":"en","type":"article","venue":"The Journal of Membrane Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Porin; Haemophilus influenzae; Microbiology; Gating; Bacterial outer membrane; Biology; Chemistry; Biophysics; Biochemistry; Antibiotics; Escherichia coli; Gene","score_opus":0.026165041806085823,"score_gpt":0.22015785271900395,"score_spread":0.19399281091291815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059992149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99014705,0.0069818282,0.00001813905,0.0003049142,0.0022397025,0.00010474096,0.00015500405,0.000012141777,0.000036472757],"genre_scores_gemma":[0.9987668,0.0007444278,0.000022476223,0.00007899643,0.00026737325,0.0000020051398,0.000030125906,0.000012293678,0.00007551349],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986259,0.00040907421,0.0006265781,0.00011189436,0.000018201341,0.00020839131],"domain_scores_gemma":[0.9987072,0.00023854457,0.0005822817,0.00022426687,0.00022490243,0.000022827351],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018502345,0.00016634093,0.0004796623,0.00010286069,0.00012241506,0.0000070203537,0.00032341154,0.00025081294,0.0010173315],"category_scores_gemma":[0.00015318197,0.00009330302,0.00012279164,0.00008599604,0.00018339783,0.00009966552,0.000081469,0.00028859673,0.00008465883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077350397,0.00019320982,0.0035382723,0.000008456094,0.00040564753,2.3696933e-7,0.00082534086,0.000015077915,0.99276775,0.000008856823,0.0004728431,0.0009907761],"study_design_scores_gemma":[0.005646683,0.0020263453,0.05469455,0.00023536415,0.0004801108,0.00010223989,0.00026956602,0.00003326671,0.92440414,0.0006562762,0.011135108,0.00031635334],"about_ca_topic_score_codex":0.0012260278,"about_ca_topic_score_gemma":0.000028346501,"teacher_disagreement_score":0.068363644,"about_ca_system_score_codex":0.000017263663,"about_ca_system_score_gemma":0.000016620004,"threshold_uncertainty_score":0.9998959},"labels":[],"label_agreement":null},{"id":"W206054439","doi":"10.1093/pch/8.2.74","title":"Management of fever without source in children: Changing times","year":2003,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Medicine; Pediatrics; Intensive care medicine","score_opus":0.007120696617551725,"score_gpt":0.24028654046779746,"score_spread":0.23316584385024575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W206054439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98496157,0.008934294,0.0004234965,0.00043051972,0.0007300222,0.00050136907,0.000017112869,0.000057984227,0.003943629],"genre_scores_gemma":[0.99684864,0.0018242813,0.00023712135,0.00020453922,0.00006194119,0.00001230239,0.000040713963,0.000015730759,0.0007547478],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988988,0.00014765942,0.0003308792,0.00020697569,0.00001831375,0.00039734386],"domain_scores_gemma":[0.9995832,0.00002272733,0.0001602967,0.00018807294,0.000020877576,0.000024842202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045906985,0.00012738055,0.00026403382,0.00031444352,0.00016747825,0.0000057927064,0.0000854299,0.00010282667,0.00023214609],"category_scores_gemma":[0.000012671324,0.00011801819,0.000058623726,0.00047787555,0.000022826403,0.00004415576,0.00004451484,0.0001983526,0.00007720992],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030117422,0.00044655707,0.96980524,0.00014471305,0.00017337062,5.850961e-7,0.0009351141,0.000045603334,0.00019511033,0.011641914,0.0016688217,0.014912861],"study_design_scores_gemma":[0.0051515675,0.00027871435,0.8961636,0.00017673454,0.00008759751,0.00015219933,0.00069946615,0.000004978033,0.0017905401,0.00034317555,0.094613604,0.00053786096],"about_ca_topic_score_codex":0.00017687793,"about_ca_topic_score_gemma":0.000012734951,"teacher_disagreement_score":0.092944786,"about_ca_system_score_codex":0.00004244093,"about_ca_system_score_gemma":0.000038244467,"threshold_uncertainty_score":0.4812642},"labels":[],"label_agreement":null},{"id":"W2060963890","doi":"10.1016/j.clinbiochem.2008.08.004","title":"Radial immunodiffusion optimization for immunoglobulin D detection","year":2008,"lang":"en","type":"article","venue":"Clinical Biochemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Notre-Dame; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Neisseria meningitidis; Medicine; Meningitis; Case fatality rate; Incidence (geometry); Conjugate vaccine; Virology; Meningococcal meningitis; Immunology; Epidemiology; Pediatrics; Immunization; Antibody; Biology; Internal medicine","score_opus":0.03060381834528549,"score_gpt":0.3004844160934719,"score_spread":0.2698805977481864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060963890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99063385,0.0006659053,0.0055086706,0.000093977134,0.0025408894,0.0001902136,0.00003073334,0.00011060815,0.00022517695],"genre_scores_gemma":[0.99675417,0.00040906473,0.0005575112,0.0000527245,0.0004082262,0.00003953946,0.00034541276,0.000014672617,0.0014186952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989771,0.000055128363,0.00046769113,0.0002957082,0.000010190956,0.00019418016],"domain_scores_gemma":[0.9992734,0.00018790126,0.00013969609,0.00026468883,0.000110825466,0.000023486979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021264296,0.00012971404,0.00022316443,0.000024458712,0.00036794838,0.000009762941,0.000116695715,0.0005138245,0.00058086094],"category_scores_gemma":[0.00041779492,0.000119915356,0.00021447569,0.000083319304,0.00016211615,0.000047925063,0.00004572746,0.00020628062,0.00010894726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045689946,0.0002288131,0.0009340487,0.000011551654,0.00006385449,3.4057268e-7,0.000010716153,0.000025651454,0.9850166,0.0000043686814,0.0022729754,0.010974183],"study_design_scores_gemma":[0.003492178,0.0003248319,0.0042272997,0.000017695838,0.000048428054,0.00014804631,0.000020218664,0.00016139183,0.95036304,0.000023632309,0.040922392,0.00025086122],"about_ca_topic_score_codex":0.000020161806,"about_ca_topic_score_gemma":8.151943e-7,"teacher_disagreement_score":0.038649417,"about_ca_system_score_codex":0.000027405898,"about_ca_system_score_gemma":0.000054515855,"threshold_uncertainty_score":0.636002},"labels":[],"label_agreement":null},{"id":"W2061489756","doi":"10.1016/j.ijid.2010.10.005","title":"Invasive Haemophilus influenzae in British Columbia: non-Hib and non-typeable strains causing disease in children and adults","year":2010,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia; Public Health Agency of Canada","funders":"Health Canada; Imperial College London; Wellcome Trust","keywords":"Serotype; Haemophilus influenzae; Multilocus sequence typing; Biology; Microbiology; Genotype; Typing; Virology; Ampicillin; Population; Amp resistance; Haemophilus; Antibiotics; Genetics; Bacteria; Medicine; Gene","score_opus":0.0036064713948286593,"score_gpt":0.2250231388524831,"score_spread":0.22141666745765443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061489756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980719,0.0005266236,0.0000041566045,0.000073446296,0.0009680189,0.00015993902,0.00014523325,0.000010262437,0.000040429855],"genre_scores_gemma":[0.99926454,0.0003669523,0.000007490747,0.00007641888,0.0001891298,0.000006736911,0.000035685316,0.0000118385005,0.00004118637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991972,0.000044572207,0.00038262585,0.00017324663,0.000038931128,0.00016342856],"domain_scores_gemma":[0.99933255,0.000076496086,0.00020659699,0.00007124526,0.00023640701,0.00007669631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107160944,0.00010483737,0.00022684246,0.00024003732,0.00008367979,0.00020568992,0.0000973988,0.00010490694,0.00027856822],"category_scores_gemma":[0.00033217028,0.00013566512,0.000059917198,0.00009849513,0.000121179204,0.00039117062,0.00008158035,0.0003501852,0.0000055212313],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102391576,0.00033182808,0.9867791,0.000010544178,0.00012971947,0.00008336219,0.00007836633,0.000029505893,0.008088379,0.0000051332963,0.00021090693,0.004150763],"study_design_scores_gemma":[0.0036242031,0.00011039255,0.99398404,0.0002459386,0.000036838297,0.001319296,0.000036007605,0.000007708673,0.00009956391,0.00030540655,0.0000970152,0.00013357468],"about_ca_topic_score_codex":0.016144916,"about_ca_topic_score_gemma":0.06527355,"teacher_disagreement_score":0.049128637,"about_ca_system_score_codex":0.00004684155,"about_ca_system_score_gemma":0.00016032183,"threshold_uncertainty_score":0.99040663},"labels":[],"label_agreement":null},{"id":"W2061957372","doi":"10.1139/w07-088","title":"Molecular characterization of four<i>Haemophilus influenzae</i>serotype a strains isolated from patients in Quebec, Canada","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"","keywords":"Multilocus sequence typing; Haemophilus influenzae; Serotype; Biology; Microbiology; Virulence; Molecular epidemiology; Genetics; Genetic diversity; Genotype; Typing; Gene; Allele; Virology; Bacteria; Medicine","score_opus":0.007244166969510721,"score_gpt":0.19497649072075213,"score_spread":0.1877323237512414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061957372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99732774,0.0002623264,0.0000831966,0.00016529395,0.0016576498,0.00011791046,0.00034645133,0.000002748498,0.000036650963],"genre_scores_gemma":[0.9992446,0.000012005493,0.000013642782,0.00024930458,0.000038917977,5.8939077e-7,0.00037388713,0.000012064072,0.000055009496],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99867874,0.00012847672,0.0006926099,0.00013111465,0.000009289412,0.00035979235],"domain_scores_gemma":[0.9989996,0.000043806984,0.00043338808,0.00012900842,0.00030485642,0.0000893579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016805228,0.00014647162,0.00036994173,0.00034771307,0.000054401553,0.000007504955,0.00019355616,0.00029567868,0.00032594506],"category_scores_gemma":[0.00007967776,0.00014032393,0.00006406363,0.00020591836,0.00008916132,0.000083034,0.0000138890955,0.00028645765,0.000006828319],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009951719,0.000026423775,0.07555063,0.0000039049455,0.0000998881,0.00003495025,0.00015518873,0.0000064876153,0.92265594,0.000020962325,0.00041094824,0.0009351355],"study_design_scores_gemma":[0.0024717685,0.00028670888,0.7631433,0.00009086447,0.00004587169,0.00014403825,0.0000820087,5.538075e-7,0.19437712,0.000026387832,0.039085917,0.0002454676],"about_ca_topic_score_codex":0.9338601,"about_ca_topic_score_gemma":0.9973238,"teacher_disagreement_score":0.7282789,"about_ca_system_score_codex":0.0002568169,"about_ca_system_score_gemma":0.0015671657,"threshold_uncertainty_score":0.5722244},"labels":[],"label_agreement":null},{"id":"W2062282371","doi":"10.1155/2013/941461","title":"Global Epidemiology of Invasive <i>Haemophilus influenzae</i> Type a Disease: Do We Need a New Vaccine?","year":2013,"lang":"en","type":"article","venue":"Journal of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"NOSM University; Lakehead University","funders":"GlaxoSmithKline","keywords":"Epidemiology; Case fatality rate; Serotype; Haemophilus influenzae; Incidence (geometry); Immunization; Disease; Medicine; Pathogen; Immunology; Virology; Environmental health; Biology; Microbiology; Antibody; Antibiotics; Internal medicine","score_opus":0.024230095518627377,"score_gpt":0.28476609423658006,"score_spread":0.2605359987179527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062282371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95803046,0.03300514,0.00007262823,0.006061718,0.0024801206,0.00021575643,0.00001872085,0.00002304923,0.00009242399],"genre_scores_gemma":[0.9954139,0.0029113477,0.00029066813,0.00034228538,0.0005669473,0.000004373944,0.000008590915,0.000017539014,0.00044433077],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99799603,0.00027902157,0.0011601257,0.00018894342,0.000027575232,0.0003482966],"domain_scores_gemma":[0.9972599,0.00048490902,0.0010404974,0.00030357353,0.00076934666,0.00014176394],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030193644,0.00025413308,0.00086430134,0.00020274607,0.000080285085,0.000013084721,0.00034442998,0.00024662717,0.0022018515],"category_scores_gemma":[0.001478907,0.0001808329,0.00029283966,0.0004433199,0.000031724896,0.00034594827,0.00010927447,0.0002449921,0.00019805795],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015276219,0.00029998206,0.6669363,0.000083445506,0.00077302504,0.000007631524,0.00012481467,0.00011522597,0.085934155,0.001301637,0.23336259,0.0095335925],"study_design_scores_gemma":[0.0053168857,0.0013908703,0.89003456,0.00037774217,0.0003968636,0.0011131437,0.00021141357,0.0000029570938,0.0033110303,0.018964287,0.078505404,0.00037482713],"about_ca_topic_score_codex":0.0004896525,"about_ca_topic_score_gemma":0.00006183372,"teacher_disagreement_score":0.2230983,"about_ca_system_score_codex":0.000045832152,"about_ca_system_score_gemma":0.00034784072,"threshold_uncertainty_score":0.9987103},"labels":[],"label_agreement":null},{"id":"W2062722915","doi":"10.1002/chin.201039236","title":"ChemInform Abstract: Preparation of Glycoconjugate Vaccines","year":2010,"lang":"en","type":"article","venue":"ChemInform","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; Canarie","funders":"","keywords":"Chemistry; Glycoconjugate; Nanotechnology; Combinatorial chemistry; Biochemistry","score_opus":0.010032083192910678,"score_gpt":0.25865105783558595,"score_spread":0.24861897464267527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062722915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6213489,0.00002994862,5.4476228e-8,0.00003678592,0.00084667245,0.0001104735,0.000012460794,0.0000515353,0.37756318],"genre_scores_gemma":[0.9764563,0.000019006804,0.000009283631,0.000018022574,0.00009593357,0.000022726528,0.00014878999,0.000008163722,0.023221808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993435,4.18296e-8,0.00034775824,0.00011339897,0.0000126418,0.00018262581],"domain_scores_gemma":[0.9993685,0.000038642098,0.00018642233,0.0002654504,0.000121844445,0.00001917856],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001095261,0.00012907755,0.00018825561,0.000058037796,0.00007512509,0.000013575256,0.00013345122,0.00025908867,0.0074609127],"category_scores_gemma":[0.00007148293,0.00010792143,0.0000797283,0.000089084606,0.0000561265,0.00026123668,0.000044480163,0.00020490719,0.00030856952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080736776,0.000042154887,0.0001805096,0.000029447829,0.00003636443,6.134857e-8,0.00019245883,1.6885984e-8,0.89311117,0.00054034987,0.013522405,0.09226432],"study_design_scores_gemma":[0.00047191567,0.00004182863,0.005034297,0.000007707141,0.000013635696,0.000031569205,0.0000393597,2.2463287e-7,0.77687156,0.00005497495,0.21733585,0.000097061245],"about_ca_topic_score_codex":0.00006530945,"about_ca_topic_score_gemma":0.00005281524,"teacher_disagreement_score":0.35510737,"about_ca_system_score_codex":0.000008832188,"about_ca_system_score_gemma":0.000041467436,"threshold_uncertainty_score":0.9934464},"labels":[],"label_agreement":null},{"id":"W2064007463","doi":"10.1097/inf.0b013e318197fac1","title":"Outbreak of Atypical Pertussis Detected by Polymerase Chain Reaction in Immunized Preschool-Aged Children","year":2009,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre; Western University; Toronto Public Health; Dalhousie University; University of Toronto; SickKids Foundation; London Health Sciences Centre; Hospital for Sick Children","funders":"","keywords":"Medicine; Bordetella pertussis; Outbreak; Odds ratio; Whooping cough; Pediatrics; Confidence interval; Attack rate; Internal medicine; Immunology; Vaccination; Virology","score_opus":0.004024497966293758,"score_gpt":0.21387355853041817,"score_spread":0.20984906056412442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064007463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953931,0.003025463,0.00004227647,0.0004305827,0.00065620046,0.0002786544,0.00004520185,0.0000677303,0.000060782957],"genre_scores_gemma":[0.998107,0.0012288751,0.0000035790306,0.000072560164,0.00039191387,0.000011235862,0.00003719064,0.000015265072,0.00013234433],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982477,0.0006271686,0.00054622354,0.00018108051,0.000044063563,0.00035380654],"domain_scores_gemma":[0.9990641,0.00014678034,0.00034075227,0.0002765511,0.00008798337,0.000083825704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040067674,0.00021328752,0.0003027024,0.00031851535,0.00042306754,0.000038129332,0.0001990189,0.00018180958,0.0003530398],"category_scores_gemma":[0.00030092816,0.00014885883,0.00020989637,0.00043828588,0.000056787554,0.00017451867,0.000037895337,0.000776539,0.000036545],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018788782,0.0010203077,0.7106386,0.000006743071,0.00014408065,0.0000030414901,0.00016508285,0.000013366917,0.2797436,0.000018694675,0.0031107017,0.003256914],"study_design_scores_gemma":[0.0031120263,0.00026622837,0.9941806,0.0000110325,0.0002654835,0.0004128448,0.000022430566,0.0000039878305,0.0011985534,0.0002598118,0.000092650334,0.00017431431],"about_ca_topic_score_codex":0.00040998368,"about_ca_topic_score_gemma":0.000031038093,"teacher_disagreement_score":0.28354207,"about_ca_system_score_codex":0.00007989726,"about_ca_system_score_gemma":0.00012824092,"threshold_uncertainty_score":0.6070287},"labels":[],"label_agreement":null},{"id":"W2064069659","doi":"10.1093/nar/gkl568","title":"High allelic diversity in the methyltransferase gene of a phase variable type III restriction-modification system has implications for the fitness of Haemophilus influenzae","year":2006,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"University of Nottingham; Wellcome Trust","keywords":"Biology; Hypervariable region; Genetics; Haemophilus influenzae; Gene; Phylogenetic tree; Phase variation; Allele; Genetic diversity; Horizontal gene transfer; Sequence analysis; Virulence; Population; Bacteria","score_opus":0.10394661477020616,"score_gpt":0.35616970092539135,"score_spread":0.2522230861551852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064069659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99478614,0.00041780522,0.0024067769,0.0010302094,0.00018453522,0.0008333084,0.00018607121,0.000017657589,0.00013749146],"genre_scores_gemma":[0.99942607,0.00008289572,0.00010566769,0.00000841373,0.000053977754,0.00012022769,0.000121012454,0.000007702124,0.00007402643],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99887556,0.00035798058,0.0003210264,0.00017782455,0.000046281584,0.00022135669],"domain_scores_gemma":[0.9981477,0.0007518452,0.00008024657,0.00045974954,0.0005510638,0.0000093985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012458208,0.000081140446,0.00018621206,0.00018328859,0.0008288594,0.000019924273,0.00040742042,0.00015539223,0.000058028025],"category_scores_gemma":[0.000105297026,0.000052851243,0.000056198503,0.0008234706,0.00023351646,0.00007376241,0.00008634176,0.0002237415,0.000008188884],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000547974,0.00050605135,0.0029068969,0.0000570237,0.00008721024,1.4446063e-7,0.00039010396,0.00018464557,0.92904985,0.06367173,0.0017041581,0.00089418626],"study_design_scores_gemma":[0.018548546,0.0023697377,0.6615754,0.00014805396,0.00043158248,0.00007830317,0.0030284373,0.00054416887,0.25960714,0.009623761,0.043530826,0.0005140753],"about_ca_topic_score_codex":0.01586409,"about_ca_topic_score_gemma":0.00018770115,"teacher_disagreement_score":0.6694427,"about_ca_system_score_codex":0.000058021105,"about_ca_system_score_gemma":0.00010225639,"threshold_uncertainty_score":0.99068934},"labels":[],"label_agreement":null},{"id":"W2065089860","doi":"10.1017/s0950268801006343","title":"Increase in meningococcal disease associated with the emergence of a novel ST-11 variant of serogroup C <i>Neisseria meningitidis</i> in Victoria, Australia, 1999–2000","year":2002,"lang":"en","type":"article","venue":"Epidemiology and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Oxford","keywords":"Neisseria meningitidis; Neisseriaceae; Meningococcal disease; Outbreak; Biology; Genotype; Housekeeping gene; Virology; Molecular epidemiology; Microbiology; Incidence (geometry); Serotype; Genetics; Gene; Bacteria; Antibiotics","score_opus":0.03703941881183117,"score_gpt":0.2773033808533535,"score_spread":0.2402639620415223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065089860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981977,0.00047560997,0.00021744157,0.00032933598,0.00039027902,0.00024038483,0.00004712858,0.000019253304,0.00008286325],"genre_scores_gemma":[0.99945015,0.00019030081,0.00002969604,0.00004084078,0.000029700865,0.00005640793,0.000063841544,0.000008176465,0.00013088799],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980653,0.00075756235,0.0006159084,0.0002585624,0.000011448682,0.00029120882],"domain_scores_gemma":[0.99873865,0.00064724433,0.000358122,0.00016862272,0.00005484313,0.00003253213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012459392,0.00016943358,0.0004766531,0.00015605676,0.000095986084,0.0000025425493,0.00006880361,0.00026162414,0.00061838044],"category_scores_gemma":[0.00077431905,0.00011975477,0.000059587284,0.00039075795,0.00022818473,0.00013689302,0.000038125752,0.00027289378,0.0000039185766],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033222197,0.0006327451,0.9496041,0.000024293935,0.00010481944,0.0000013397707,0.00039339866,0.000240543,0.045480315,0.0022632852,0.0007194096,0.00020356392],"study_design_scores_gemma":[0.0020689883,0.00039676306,0.99345076,0.000099358214,0.0000765312,0.00003141835,0.000052813288,0.00021419063,0.0007830791,0.00016089606,0.0025052081,0.0001599851],"about_ca_topic_score_codex":0.006711314,"about_ca_topic_score_gemma":0.0044603255,"teacher_disagreement_score":0.044697236,"about_ca_system_score_codex":0.00002856848,"about_ca_system_score_gemma":0.000022651862,"threshold_uncertainty_score":0.9999031},"labels":[],"label_agreement":null},{"id":"W2065202539","doi":"10.1097/inf.0b013e3182706b89","title":"The Disease Burden of Invasive Meningococcal Serogroup B Disease in Canada","year":2012,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Izaak Walton Killam Health Centre; Public Health Agency of Canada; Nova Scotia Health Authority; University of Ottawa; Children's Hospital of Eastern Ontario; Stollery Children's Hospital; University of British Columbia; Dalhousie University; BC Children's Hospital","funders":"","keywords":"Medicine; Neisseria meningitidis; Meningococcal disease; Case fatality rate; Incidence (geometry); Meningococcal vaccine; Population; Pediatrics; Disease burden; Confidence interval; Immunization; Disease; Immunology; Internal medicine; Environmental health; Antigen","score_opus":0.0071798512010735885,"score_gpt":0.2133347199923569,"score_spread":0.2061548687912833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065202539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864127,0.009427755,0.000009724713,0.00078383664,0.0029063774,0.00028886853,0.0000765691,0.000019632878,0.00007450902],"genre_scores_gemma":[0.99652886,0.0018032482,8.9082744e-7,0.00006513412,0.0013970787,0.0000462358,0.000013092444,0.000019813142,0.00012561594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981605,0.0005202231,0.000493285,0.00013923564,0.00007139264,0.00061540486],"domain_scores_gemma":[0.9982176,0.00063734385,0.00033138142,0.00033326788,0.00013121673,0.00034921325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005062798,0.00021526612,0.00021985278,0.00012047264,0.0008207109,0.00004756536,0.00030278228,0.000048727965,0.00033726613],"category_scores_gemma":[0.00062058057,0.00012472778,0.00017513792,0.00033139475,0.000098527475,0.00020465053,0.00012355106,0.0005075619,0.000041566385],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004963069,0.00016725871,0.99499154,0.000027283408,0.00009676605,0.00001117551,0.00020117924,0.00046785446,0.00029297144,0.00020116329,0.0025898807,0.0004566109],"study_design_scores_gemma":[0.0011999013,0.00004156752,0.9928139,0.00001990702,0.00052393426,0.00008749754,0.0002773334,0.000020455132,0.000030117722,0.0005965552,0.004163195,0.00022566834],"about_ca_topic_score_codex":0.1316314,"about_ca_topic_score_gemma":0.05710773,"teacher_disagreement_score":0.07452367,"about_ca_system_score_codex":0.00029283745,"about_ca_system_score_gemma":0.002196943,"threshold_uncertainty_score":0.9600976},"labels":[],"label_agreement":null},{"id":"W2065403173","doi":"10.1371/journal.ppat.1002521","title":"Phosphorylcholine Allows for Evasion of Bactericidal Antibody by Haemophilus influenzae","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; University of Oxford; University of Pennsylvania","keywords":"Haemophilus influenzae; Phosphorylcholine; Microbiology; Antibody; Phase variation; CHOP; Biology; Epitope; Immunology; Genetics; Gene; Phenotype; Antibiotics","score_opus":0.023858848313672784,"score_gpt":0.27724374457380374,"score_spread":0.25338489626013094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065403173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578375,0.0017477649,0.00019497739,0.00004555162,0.0010019536,0.00033862726,0.0006530347,0.000053995034,0.00018036486],"genre_scores_gemma":[0.9983421,0.000101314785,0.0002352028,0.00007256331,0.00014211446,0.00004375784,0.0006837578,0.000024847557,0.0003543282],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999079,0.0000611485,0.00030992873,0.00016983243,0.000015605547,0.000364479],"domain_scores_gemma":[0.9993955,0.00008029037,0.00014104953,0.00023451273,0.00011432014,0.000034332897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016143573,0.00016153148,0.00030582707,0.000063786574,0.000121624646,0.0000063817033,0.00010533426,0.00021934058,0.00049361336],"category_scores_gemma":[0.0000815017,0.00013727926,0.00012768332,0.00009735071,0.000051618055,0.00013206174,0.000052516705,0.00010196868,0.00012465798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014838537,0.0005197708,0.020954931,0.00002948327,0.00012420022,8.578458e-8,0.00011263565,3.9167975e-7,0.97494566,0.00011602806,0.0018877214,0.0011607131],"study_design_scores_gemma":[0.0011928215,0.00024960522,0.026999472,0.000024158646,0.00012808302,0.00001883028,0.000033383465,0.0000034432298,0.8696818,0.000020117512,0.10145659,0.00019170654],"about_ca_topic_score_codex":0.00003200065,"about_ca_topic_score_gemma":0.000001918222,"teacher_disagreement_score":0.10526387,"about_ca_system_score_codex":0.000016989736,"about_ca_system_score_gemma":0.000017248582,"threshold_uncertainty_score":0.5598086},"labels":[],"label_agreement":null},{"id":"W2065552255","doi":"10.1002/ebch.230","title":"Summary of ‘Corticosteroids for acute bacterial meningitis’","year":2008,"lang":"en","type":"article","venue":"Evidence-Based Child Health A Cochrane Review Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Cochrane collaboration; Systematic review; Intensive care medicine; Alternative medicine; MEDLINE; Pathology; Cochrane Library; Political science","score_opus":0.047481982906954295,"score_gpt":0.3493337015408188,"score_spread":0.3018517186338645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065552255","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14171457,0.8332142,0.0010820448,0.018934377,0.0034693207,0.0013473838,0.00012811754,0.000053065316,0.00005690914],"genre_scores_gemma":[0.11494715,0.8802311,0.00064306863,0.0029402194,0.00076442736,0.00009165915,0.0001529561,0.00003842126,0.00019102007],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99716604,0.00054020406,0.0014138022,0.0002694571,0.00006374525,0.000546776],"domain_scores_gemma":[0.9977205,0.00040206956,0.0010300584,0.0003315424,0.00038844612,0.0001273847],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012955284,0.00026354866,0.0011583245,0.00016391816,0.0008457201,0.000017129021,0.00027345217,0.00014402854,0.0011510587],"category_scores_gemma":[0.00046147086,0.00020959739,0.00047850772,0.00023112685,0.00012738223,0.0002988034,0.0000336122,0.00048262844,0.000040799456],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065331687,0.0016393306,0.0075923814,0.026619239,0.0024805923,0.000063996944,0.0005634477,0.000018530609,0.29177922,0.00038233656,0.49785444,0.16447334],"study_design_scores_gemma":[0.013284652,0.009511248,0.017782642,0.18945809,0.0013980918,0.022249166,0.000024738574,0.000008461191,0.031442795,0.000086312495,0.7135905,0.0011632838],"about_ca_topic_score_codex":0.000046136563,"about_ca_topic_score_gemma":0.000010902172,"teacher_disagreement_score":0.26033643,"about_ca_system_score_codex":0.000101048034,"about_ca_system_score_gemma":0.0008925372,"threshold_uncertainty_score":0.999762},"labels":[],"label_agreement":null},{"id":"W2066200771","doi":"10.1136/ebm.9.2.48","title":"Review: adjuvant corticosteroid therapy reduces death, hearing loss, and neurological sequelae in bacterial meningitis","year":2004,"lang":"en","type":"article","venue":"Evidence-Based Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Placebo; Meningitis; Pediatrics; Corticosteroid; Clinical trial; MEDLINE; Randomized controlled trial; Internal medicine; Alternative medicine; Pathology","score_opus":0.07324314951628484,"score_gpt":0.31074154903703827,"score_spread":0.2374983995207534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066200771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85692096,0.12674718,0.000021311074,0.014797465,0.001058385,0.00037151188,0.0000037069194,0.00005838945,0.000021123253],"genre_scores_gemma":[0.92632157,0.07116144,0.00004185822,0.0020882057,0.00025284218,0.00005221294,0.000037749203,0.0000134818065,0.00003065602],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99849576,0.0002552625,0.0004950977,0.00039313346,0.0000325968,0.00032816478],"domain_scores_gemma":[0.99924594,0.00027475643,0.00013600804,0.00022758277,0.000064795044,0.000050929702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005437538,0.00022522343,0.0005398564,0.00012599191,0.00011904992,0.000014780388,0.00012805682,0.00016734023,0.0008657854],"category_scores_gemma":[0.0005474594,0.0001556275,0.000050230483,0.00019074618,0.00023906922,0.00019519743,0.00004469896,0.0003213747,0.00003317946],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075949694,0.00011034765,0.016030999,0.00012204181,0.00003216348,0.00004173309,0.00012026161,0.000007090918,0.96216106,0.00006640334,0.0009027822,0.01964561],"study_design_scores_gemma":[0.025248287,0.012076663,0.5998466,0.034625445,0.0002649111,0.0019493079,0.00007240656,0.00000815222,0.20256177,0.00072118914,0.121509,0.0011162455],"about_ca_topic_score_codex":0.00057534943,"about_ca_topic_score_gemma":0.000051339248,"teacher_disagreement_score":0.7595993,"about_ca_system_score_codex":0.000042900854,"about_ca_system_score_gemma":0.000096088486,"threshold_uncertainty_score":0.94797426},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"meta_analysis","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"split"},{"id":"W2066215959","doi":"10.1056/nejmp068288","title":"The Control of Pertussis — 2007 and Beyond","year":2007,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":129,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Whooping cough; Outbreak; Pediatrics; Bordetella pertussis; Pertussis vaccine; Family medicine; Immunization; Vaccination; Virology; Immunology","score_opus":0.0080002898415493,"score_gpt":0.24692180348975432,"score_spread":0.23892151364820502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066215959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9652719,0.021583451,0.0016743486,0.0069224667,0.0028951687,0.00005731727,0.000002094811,0.0000039223955,0.0015893406],"genre_scores_gemma":[0.9970392,0.0010454158,0.000020597496,0.00014271257,0.0011023687,1.0763296e-7,7.9851935e-7,0.0000034126401,0.0006453645],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994133,0.00005934887,0.00035287882,0.000039796614,0.0000200787,0.000114577146],"domain_scores_gemma":[0.99894875,0.00060164556,0.00022664935,0.00006512005,0.00012322202,0.000034607474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012719283,0.000060758015,0.0002231277,0.000068831854,0.00008491529,0.0000029081893,0.00006448233,0.000060651455,0.0002715009],"category_scores_gemma":[0.00026863356,0.000028023744,0.000031464268,0.000050502065,0.00014098082,0.000032777774,0.000007870847,0.00016842975,0.000002038355],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019155351,0.00004198978,0.016231509,0.0000076262795,0.000326989,0.0000069286457,0.0006774005,7.7084746e-7,0.4883221,0.0013578046,0.02770206,0.46340927],"study_design_scores_gemma":[0.03968393,0.0016856113,0.057930052,0.00006606072,0.00017740161,0.0018298958,0.00048516778,8.2797214e-7,0.0071914885,0.00057155255,0.89031655,0.000061487],"about_ca_topic_score_codex":0.00007625524,"about_ca_topic_score_gemma":0.000049085025,"teacher_disagreement_score":0.86261445,"about_ca_system_score_codex":0.0000054864036,"about_ca_system_score_gemma":0.000027934955,"threshold_uncertainty_score":0.29727444},"labels":[],"label_agreement":null},{"id":"W2066547664","doi":"10.1016/j.jpeds.2014.06.013","title":"Antithrombotic Therapy for Secondary Stroke Prevention in Bacterial Meningitis in Children","year":2014,"lang":"en","type":"article","venue":"The Journal of Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Hospital for Sick Children","funders":"","keywords":"Medicine; Aspirin; Stroke (engine); Antithrombotic; Heparin; Meningitis; Infarction; Cerebral infarction; Surgery; Intracerebral hemorrhage; Pediatrics; Internal medicine; Myocardial infarction; Ischemia; Subarachnoid hemorrhage","score_opus":0.009858747711388104,"score_gpt":0.24731013064599813,"score_spread":0.23745138293461002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066547664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974219,0.00076675904,0.00031514827,0.0000972548,0.0011845955,0.00016686253,0.0000123888485,0.000003807034,0.00003124502],"genre_scores_gemma":[0.9982834,0.0010123823,0.00007427296,0.000011741956,0.00051236636,0.0000021155677,0.0000120147315,0.000007518713,0.000084198684],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99924207,0.00022034267,0.00033585305,0.000053224896,0.000012856637,0.00013564831],"domain_scores_gemma":[0.99946624,0.00016128096,0.00023984775,0.0000747358,0.000050087536,0.000007808216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008836102,0.00007210949,0.00018951016,0.00017102573,0.000053234973,0.000012354459,0.00012535401,0.000097247204,0.00013701916],"category_scores_gemma":[0.00006978697,0.000048597427,0.00006513145,0.000102931685,0.000019310448,0.000112354755,0.000016087135,0.00021768142,0.0000055015475],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016205324,0.0005854734,0.41028342,0.000032914406,0.0000897311,4.4109598e-7,0.0007220951,0.00010241301,0.5414391,0.0002391764,0.0033054405,0.041579258],"study_design_scores_gemma":[0.008586491,0.0015807458,0.9761529,0.000017946833,0.00008379367,0.00018671756,0.00006156104,0.0000025998074,0.009629556,0.0007739639,0.0027883663,0.00013536382],"about_ca_topic_score_codex":0.00004810602,"about_ca_topic_score_gemma":0.00005361778,"teacher_disagreement_score":0.56586945,"about_ca_system_score_codex":0.000019524356,"about_ca_system_score_gemma":0.000052873835,"threshold_uncertainty_score":0.19817457},"labels":[],"label_agreement":null},{"id":"W2066730312","doi":"10.1097/00006454-200204000-00019","title":"Safety, tolerability and immunogenicity of low dose Haemophilus Influenzae type B conjugated to the outer membrane protein complex of Neisseria Meningitidis group B","year":2002,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Immunogenicity; Microbiology; Haemophilus influenzae; Bacterial outer membrane; Virology; Diphtheria toxin; Corynebacterium diphtheriae; Diphtheria; Biology; Antibody; Vaccination; Antibiotics; Toxin; Bacteria; Immunology; Biochemistry; Escherichia coli","score_opus":0.016291756216581434,"score_gpt":0.2357604702169169,"score_spread":0.21946871400033546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066730312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964449,0.0014613938,0.00003388622,0.00059816934,0.00064259936,0.0006065166,0.00008958272,0.000030250409,0.00009271699],"genre_scores_gemma":[0.999147,0.00041105124,0.000010309229,0.00008133712,0.00024620435,0.00001551694,0.000009343333,0.000015552558,0.0000637034],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983695,0.00047553988,0.00066335173,0.00017417602,0.000042405525,0.00027501],"domain_scores_gemma":[0.99869466,0.00016721404,0.00040112357,0.00036279048,0.00029619658,0.000078032324],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005535769,0.00020242465,0.00037577565,0.00012376888,0.00055163837,0.00003924841,0.00023057574,0.00010091293,0.0013207342],"category_scores_gemma":[0.00028380126,0.000120510296,0.00015780742,0.00041361162,0.00016463049,0.00011498566,0.00014312494,0.00035533996,0.000043636774],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005199831,0.0018447565,0.22883883,0.00029924334,0.0010316911,0.000008270247,0.0020526648,0.0006129123,0.7547487,0.00041107112,0.0023191448,0.0026328692],"study_design_scores_gemma":[0.006711572,0.001794626,0.9765015,0.00007684336,0.0010850824,0.0014047679,0.00014186632,0.00013304314,0.007011442,0.0009551769,0.0035858208,0.00059821195],"about_ca_topic_score_codex":0.0002638585,"about_ca_topic_score_gemma":0.000038513503,"teacher_disagreement_score":0.7477373,"about_ca_system_score_codex":0.000038412432,"about_ca_system_score_gemma":0.000051438954,"threshold_uncertainty_score":0.9995922},"labels":[],"label_agreement":null},{"id":"W2066939958","doi":"10.1503/cmaj.111-2004","title":"Steroids in infection: an old wives' tale","year":2011,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Prasad; Meningitis; Medicine; Bioinformatics; Pediatrics; Biology; Art; Literature","score_opus":0.01305629616939115,"score_gpt":0.22733815276441588,"score_spread":0.21428185659502472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066939958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913563,0.00008026919,0.00001945448,0.0010873753,0.0027938194,0.00004696653,0.000008484158,0.000015353824,0.004591976],"genre_scores_gemma":[0.9966547,0.000074216114,0.00001504785,0.0012274513,0.00043942488,0.000004872775,0.000014481475,0.000007693455,0.0015621075],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902654,0.00023600565,0.00027455445,0.0001034594,0.000042761385,0.00031669333],"domain_scores_gemma":[0.9994378,0.00002808676,0.00010168722,0.00007170676,0.00012073071,0.00023995203],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007141628,0.000078549965,0.00013734848,0.0002085001,0.00020171494,0.000028084723,0.0001012923,0.00044809628,0.025314176],"category_scores_gemma":[0.00023957506,0.00007280783,0.000046209705,0.00015539084,0.000026622354,0.00022084334,0.0000091445445,0.00066594797,0.0004836798],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019653226,0.000138609,0.94089013,0.0000023348302,0.000099604025,0.00004599154,0.0012134297,4.703368e-7,0.001527554,0.0007270915,0.030513152,0.024821995],"study_design_scores_gemma":[0.0010110094,0.00014287117,0.6602377,0.000016536931,0.000009678933,0.0005087896,0.00013933535,0.0000021727037,0.00030378642,0.0001889038,0.3373234,0.00011578733],"about_ca_topic_score_codex":0.030019604,"about_ca_topic_score_gemma":0.21477427,"teacher_disagreement_score":0.30681026,"about_ca_system_score_codex":0.00030727626,"about_ca_system_score_gemma":0.00048423684,"threshold_uncertainty_score":0.9764396},"labels":[],"label_agreement":null},{"id":"W2067178107","doi":"10.1016/j.vaccine.2013.03.063","title":"Diversity of Canadian meningococcal serogroup B isolates and estimated coverage by an investigational meningococcal serogroup B vaccine (4CMenB)","year":2013,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Alberta; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; Stollery Children's Hospital; University of British Columbia","funders":"Sanofi Pasteur; Michael Smith Health Research BC","keywords":"Neisseria meningitidis; Meningococcal vaccine; Multilocus sequence typing; Virology; Bacterial adhesin; Neisseria; Typing; Neisseriaceae; Microbiology; Population; Antigen; Meningococcal disease; Medicine; Serotype; Biology; Immunology; Genotype; Escherichia coli; Genetics; Bacteria; Antibiotics","score_opus":0.0160790130714001,"score_gpt":0.22342786125073216,"score_spread":0.20734884817933205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067178107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757224,0.00048972387,0.000054515534,0.0008237846,0.00029721644,0.0003943512,0.00014961076,0.00009650534,0.00012204187],"genre_scores_gemma":[0.99839765,0.00009419043,0.00021723128,0.00015692857,0.000052313186,0.000020457996,0.00075513264,0.000022978322,0.00028313068],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99861246,0.00014388683,0.0003898394,0.00038321887,0.000022072474,0.00044850414],"domain_scores_gemma":[0.99911666,0.000092212395,0.00015662279,0.00025166,0.00018455209,0.00019828018],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020985334,0.00027986692,0.00040712082,0.00038154796,0.00076600263,0.00004162624,0.00020154715,0.0003055926,0.0028701895],"category_scores_gemma":[0.000055786757,0.00025512147,0.0000528709,0.00042329193,0.00003557823,0.0005138097,0.00029323448,0.00024767942,0.00008805372],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000895878,0.00013051234,0.36630353,0.000018878529,0.00019103101,6.4885944e-7,0.00050539494,0.000011767576,0.620598,0.0002716264,0.010551811,0.0013271712],"study_design_scores_gemma":[0.0062000193,0.0012174359,0.89652777,0.00006782256,0.00017627698,0.00016026717,0.00024177191,0.00067418563,0.067122206,0.00063968665,0.02625064,0.00072195125],"about_ca_topic_score_codex":0.18643638,"about_ca_topic_score_gemma":0.019512506,"teacher_disagreement_score":0.55347586,"about_ca_system_score_codex":0.000052486757,"about_ca_system_score_gemma":0.000059387417,"threshold_uncertainty_score":0.9999901},"labels":[],"label_agreement":null},{"id":"W2067790985","doi":"10.1586/14760584.3.4.343","title":"Developmental immunology and vaccines: Immune responses to vaccines in premature infants","year":2004,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Immunogenicity; Immune system; Immunology; Medicine; Vaccination","score_opus":0.02133841107832099,"score_gpt":0.332900058294924,"score_spread":0.31156164721660295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067790985","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023513425,0.9928456,0.0000025011554,0.00035620082,0.0016047575,0.0025444014,0.00009357389,0.00009622826,0.00010537801],"genre_scores_gemma":[0.000119163975,0.9972703,0.00044024675,0.00019223282,0.00016897878,0.0006968232,0.00030740548,0.000108453365,0.0006964045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948344,0.0007386261,0.0026907923,0.000980963,0.000050885403,0.0007043104],"domain_scores_gemma":[0.997567,0.000481027,0.0009200521,0.0007198845,0.00024255348,0.00006951383],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006774764,0.0011576159,0.00520474,0.0009986341,0.00016994688,0.00003240345,0.0007563825,0.001002637,0.001287103],"category_scores_gemma":[0.0009732217,0.00083995424,0.0005901536,0.0011941218,0.000048608046,0.00023436855,0.00064794207,0.00071397296,0.0002586691],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036754168,0.00047478086,0.0002070953,0.1083221,0.0012155096,0.0000171352,0.0004949429,9.19314e-8,0.007579022,0.00015159315,0.0067523182,0.8744179],"study_design_scores_gemma":[0.0009813705,0.00021903445,0.0015568315,0.17688358,0.00025673734,0.0011175715,0.000056886933,9.033529e-9,0.00038954295,0.000012986915,0.81781226,0.00071321474],"about_ca_topic_score_codex":0.00043457467,"about_ca_topic_score_gemma":0.000113093905,"teacher_disagreement_score":0.8737047,"about_ca_system_score_codex":0.00019703076,"about_ca_system_score_gemma":0.00056962617,"threshold_uncertainty_score":0.99962586},"labels":[],"label_agreement":null},{"id":"W2068241783","doi":"10.1016/j.ijid.2012.05.046","title":"Broadening protection with a conjugate quadrivalent (ACWY) meningococcal Vaccine","year":2012,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Conjugate; Medicine; Meningococcal vaccine; Conjugate vaccine; Virology; Immunization; Immunology; Antigen; Mathematics","score_opus":0.010727640614028566,"score_gpt":0.2549166255934063,"score_spread":0.24418898497937772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068241783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99203396,0.0010204979,0.0022318726,0.00029860492,0.0039346092,0.00013516023,0.000017235467,0.00005807812,0.0002699955],"genre_scores_gemma":[0.9987907,0.00007376986,0.000031441843,0.00005938567,0.00086623215,0.000018433742,0.000015572545,0.00001696279,0.00012752821],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991072,0.00011019542,0.00039381647,0.00010250765,0.0000626947,0.00022360316],"domain_scores_gemma":[0.9988121,0.00006243683,0.00043884854,0.00008755229,0.00053252926,0.00006657981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001516728,0.00015564924,0.00022672863,0.00027764155,0.00012073837,0.000053888776,0.00015450416,0.00008197751,0.0007698604],"category_scores_gemma":[0.00012439789,0.000112794805,0.00014145696,0.000106627485,0.000039080252,0.00054057204,0.000044024688,0.00024066627,0.00007691153],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022105023,0.0015856908,0.71998984,0.000021786385,0.0023989726,0.000018260183,0.0005616536,0.00018209577,0.25375494,0.0010708849,0.0023134577,0.015891938],"study_design_scores_gemma":[0.015555084,0.003172117,0.7343197,0.00059891824,0.0008454353,0.016268717,0.0005325053,0.000019595202,0.083078764,0.00044086497,0.14431168,0.000856649],"about_ca_topic_score_codex":0.00008162311,"about_ca_topic_score_gemma":0.000011837761,"teacher_disagreement_score":0.17067617,"about_ca_system_score_codex":0.00011803119,"about_ca_system_score_gemma":0.00006232648,"threshold_uncertainty_score":0.8429432},"labels":[],"label_agreement":null},{"id":"W2068313233","doi":"10.1016/j.vaccine.2003.09.005","title":"Nodule at injection site as an adverse event following immunization: case definition and guidelines for data collection, analysis, and presentation","year":2003,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Dalhousie University","funders":"","keywords":"Presentation (obstetrics); Immunization; Medicine; Data collection; Injection site; Adverse effect; Case presentation; Immunology; Surgery; Internal medicine; Antibody; Statistics","score_opus":0.09705535842377515,"score_gpt":0.38562799771001643,"score_spread":0.2885726392862413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068313233","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032320905,0.96234995,0.0024645987,0.000039760253,0.0012204814,0.0011703867,0.0003457414,0.00007050874,0.000017681645],"genre_scores_gemma":[0.0006510389,0.9721184,0.0009159137,0.000030727664,0.00013096665,0.00010417125,0.024766661,0.000040791205,0.0012413271],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99810946,0.00033138433,0.0007471212,0.0006072123,0.000019094537,0.00018575056],"domain_scores_gemma":[0.99856234,0.00014613927,0.00041308484,0.00055759103,0.0002857881,0.00003507548],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046400202,0.00031822987,0.0008678437,0.0005155134,0.00074280833,0.000047039048,0.00008784849,0.00039198398,0.00020925752],"category_scores_gemma":[0.00027416402,0.0002794481,0.00018913386,0.0008031259,0.000010000588,0.00037796068,0.00014966335,0.00013132046,0.000018951385],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006753782,0.0007950178,0.0079424195,0.006644894,0.017382028,0.000055043347,0.0006125866,0.00005024513,0.0022237063,0.0003863396,0.034776106,0.92845625],"study_design_scores_gemma":[0.0017321887,0.00034678142,0.0002341162,0.0004567841,0.011017725,0.004348865,0.00009203112,0.00016662553,0.0000357679,0.00003631607,0.9811087,0.00042405733],"about_ca_topic_score_codex":0.0013792493,"about_ca_topic_score_gemma":0.0024483453,"teacher_disagreement_score":0.94633263,"about_ca_system_score_codex":0.0000741784,"about_ca_system_score_gemma":0.0000699339,"threshold_uncertainty_score":0.9999658},"labels":[],"label_agreement":null},{"id":"W2068690483","doi":"10.1073/pnas.1100782108","title":"Oligosaccharide conjugates of <i>Bordetella pertussis</i> and <i>bronchiseptica</i> induce bactericidal antibodies, an addition to pertussis vaccine","year":2011,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Bordetella pertussis; Microbiology; Immunogenicity; Pertussis toxin; Conjugate vaccine; Bordetella bronchiseptica; Whooping cough; Bordetella; Virology; Antibody; Pertussis vaccine; Biology; Vaccination; Immunology; Bacteria; G protein; Biochemistry; Immunization","score_opus":0.040672445717545316,"score_gpt":0.27708946205266194,"score_spread":0.23641701633511664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068690483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99727654,0.00015105789,5.852941e-7,0.00064622966,0.00005242589,0.00015019502,0.00008275235,0.000013455,0.0016267474],"genre_scores_gemma":[0.9989645,0.000096183576,0.0005975835,0.00019690515,0.0000370485,0.000008212391,0.0000015183482,0.000004626823,0.00009344249],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914926,0.00001471998,0.0003607856,0.000237637,0.00008221909,0.000155361],"domain_scores_gemma":[0.99927074,0.000075431286,0.00033024902,0.000014254476,0.00028225358,0.000027065817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004769665,0.00011694094,0.00023428115,0.00017303432,0.00020608601,0.000011891507,0.000370721,0.00012897559,0.0002188637],"category_scores_gemma":[0.00023627334,0.00007641008,0.00005151188,0.00038119202,0.00039705535,0.00043299756,0.00013815591,0.00012154429,0.0000028602758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063276275,0.00009507985,0.0141466865,0.000027834396,0.000029098841,1.3778155e-9,0.0004913602,4.4714335e-7,0.9785793,0.004950801,0.000874115,0.00074202084],"study_design_scores_gemma":[0.00020551983,0.00023167863,0.25801995,0.000059081238,0.000024116922,0.000017131728,0.00022730346,0.0000053926165,0.73879004,0.0015222976,0.00081809063,0.00007941631],"about_ca_topic_score_codex":0.00008579889,"about_ca_topic_score_gemma":0.0000011007569,"teacher_disagreement_score":0.24387327,"about_ca_system_score_codex":0.0000101639425,"about_ca_system_score_gemma":0.000023357954,"threshold_uncertainty_score":0.31159124},"labels":[],"label_agreement":null},{"id":"W2068832719","doi":"10.1016/j.vaccine.2008.11.072","title":"International Bordetella pertussis assay standardization and harmonization meeting report. Centers for Disease Control and Prevention, Atlanta, Georgia, United States, 19–20 July 2007","year":2008,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"U.S. Food and Drug Administration; Centers for Disease Control and Prevention; Vanderbilt University","keywords":"Standardization; Harmonization; Bordetella pertussis; Whooping cough; Medicine; Atlanta; Identification (biology); Political science; Environmental health; Vaccination; Immunology; Biology; Pathology; Metropolitan area","score_opus":0.009238901985188331,"score_gpt":0.2451474063822988,"score_spread":0.23590850439711045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068832719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9022062,0.002063407,0.08989764,0.0027852259,0.0012614583,0.0007991551,0.0007067214,0.00013199827,0.00014819445],"genre_scores_gemma":[0.986757,0.0023854815,0.00026826252,0.00018516631,0.00016396683,0.00003111044,0.006822771,0.000024594872,0.003361694],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99910533,0.00010336091,0.0003356323,0.00026408926,0.000023880868,0.00016772005],"domain_scores_gemma":[0.9992351,0.00011408713,0.00019409247,0.00011229188,0.0002930998,0.000051328607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027547503,0.00013895052,0.00017996437,0.0001657433,0.0003494625,0.00003394912,0.000046248824,0.00008781241,0.00015228099],"category_scores_gemma":[0.00027243438,0.00012389536,0.000041127074,0.0001118616,0.000019327537,0.00014731953,0.000030870015,0.00006882225,0.0000038059165],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00635819,0.00055883406,0.7116008,0.00022819088,0.0015833316,0.000050917562,0.0010560822,0.0007850947,0.12873036,0.00034389886,0.13685097,0.011853369],"study_design_scores_gemma":[0.0067233946,0.00016863253,0.066063315,0.00007073537,0.00018348842,0.00033438246,0.00006589596,0.0018607836,0.001421002,0.00012235534,0.922738,0.00024802538],"about_ca_topic_score_codex":0.00016772507,"about_ca_topic_score_gemma":0.000031402906,"teacher_disagreement_score":0.785887,"about_ca_system_score_codex":0.0000427706,"about_ca_system_score_gemma":0.00004705598,"threshold_uncertainty_score":0.5052306},"labels":[],"label_agreement":null},{"id":"W2069069274","doi":"10.1097/pec.0b013e3181b0a095","title":"Risk of Bacterial or Herpes Simplex Virus Meningitis/Encephalitis in Children With Complex Febrile Seizures","year":2009,"lang":"en","type":"article","venue":"Pediatric Emergency Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Encephalitis; Meningitis; Lumbar puncture; Convulsion; Viral meningitis; Streptococcus pneumoniae; Viral encephalitis; Pediatrics; Herpes simplex virus; Febrile seizure; Epilepsy; Bacterial meningitis; Virus; Internal medicine; Immunology; Cerebrospinal fluid; Antibiotics; Microbiology","score_opus":0.011457660518945768,"score_gpt":0.2546411168990236,"score_spread":0.24318345638007782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069069274","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99539095,0.0025556672,0.000015193966,0.000018802584,0.00067113765,0.00029439243,0.00072558894,0.00006147867,0.0002667958],"genre_scores_gemma":[0.9959525,0.0028036383,0.00008981322,0.000007247974,0.00039252386,0.000018274106,0.0005863133,0.000015733889,0.00013395459],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986845,0.00017450137,0.00046423636,0.00030508413,0.000030553027,0.00034111153],"domain_scores_gemma":[0.99935025,0.000033608085,0.00022995503,0.00023082629,0.0001276946,0.000027663118],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000822909,0.00022192013,0.0003669851,0.0001812139,0.00014986037,0.000008745548,0.00017331418,0.00017676211,0.0073520085],"category_scores_gemma":[0.000052235824,0.00017071486,0.00009275965,0.0004495538,0.000034617256,0.00011379329,0.000037171445,0.00013962056,0.00003576998],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007247105,0.00035993487,0.91820246,0.000042864565,0.00023149466,0.000004886811,0.0016905527,0.00003862096,0.03288931,0.00009414679,0.0127978455,0.03292317],"study_design_scores_gemma":[0.0016265133,0.0007042528,0.98526925,0.0000058431447,0.00017957044,0.000053845644,0.000271329,5.1377464e-7,0.0038326418,0.000047047986,0.0077141626,0.0002950392],"about_ca_topic_score_codex":0.0036113022,"about_ca_topic_score_gemma":0.0020908345,"teacher_disagreement_score":0.067066774,"about_ca_system_score_codex":0.000025516523,"about_ca_system_score_gemma":0.00006850101,"threshold_uncertainty_score":0.9935554},"labels":[],"label_agreement":null},{"id":"W2069262171","doi":"10.1111/j.1574-695x.2009.00634.x","title":"Characterization of nontypeable<i>Haemophilus influenzae</i>collected from respiratory infections and invasive disease cases in Manitoba, Canada","year":2009,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Shared Health; Health Sciences Centre; Manitoba Health; University of Saskatchewan; Public Health Agency of Canada","funders":"Health Canada; Imperial College London; Wellcome Trust","keywords":"Haemophilus influenzae; Biology; Multilocus sequence typing; Serotype; Microbiology; Amp resistance; Ampicillin; Pasteurellaceae; Respiratory tract infections; Haemophilus; Respiratory tract; Respiratory disease; Virology; Genotype; Respiratory system; Antibiotics; Bacteria; Gene; Genetics; Medicine; Internal medicine; Lung","score_opus":0.012311394834083021,"score_gpt":0.21884092706963484,"score_spread":0.20652953223555182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069262171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99363923,0.0030873157,0.000012756799,0.0008223067,0.0016552483,0.00034337855,0.00034657767,0.00004724966,0.000045950215],"genre_scores_gemma":[0.99714863,0.00050291937,0.0000061142687,0.0012854242,0.000084349864,0.000034628225,0.00084929826,0.000014384951,0.00007423494],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978229,0.0005284024,0.0007190443,0.00045432014,0.000020965488,0.00045440803],"domain_scores_gemma":[0.99870485,0.00049617107,0.00026287494,0.0003249677,0.00013689772,0.00007426091],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016593677,0.00028189717,0.0006260048,0.0002817802,0.00018705614,0.000008124703,0.0002359377,0.00068082876,0.0007814291],"category_scores_gemma":[0.00092529913,0.0002637602,0.000059816575,0.00034848004,0.00045666358,0.00009824711,0.00012370461,0.000566364,0.000026940901],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034123988,0.0002669711,0.03787221,0.000009292869,0.0001582989,0.000049830727,0.00008093162,9.561955e-7,0.9583494,0.00012544727,0.0005582849,0.0021871082],"study_design_scores_gemma":[0.0028908828,0.0006465339,0.8983743,0.00013561225,0.00007120177,0.0003038044,0.00008660373,8.7721804e-7,0.06429347,0.00015307269,0.032716524,0.00032711503],"about_ca_topic_score_codex":0.21970956,"about_ca_topic_score_gemma":0.5777168,"teacher_disagreement_score":0.89405596,"about_ca_system_score_codex":0.00013981665,"about_ca_system_score_gemma":0.0010859474,"threshold_uncertainty_score":0.99998146},"labels":[],"label_agreement":null},{"id":"W2069503593","doi":"10.1097/01.inf.0000190028.96152.46","title":"A Modified Vaccine Reduces the Rate of Large Injection Site Reactions to the Preschool Booster Dose of Diphtheria-Tetanus-Acellular Pertussis Vaccine","year":2005,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; BC Children's Hospital; Izaak Walton Killam Health Centre; Dalhousie University; University of British Columbia","funders":"Centers for Disease Control and Prevention","keywords":"Medicine; Diphtheria; Booster dose; Tetanus; Vaccination; Pertactin; Whooping cough; Booster (rocketry); Pediatrics; Immunization; Immunology; Antibody; Internal medicine; Pertussis toxin","score_opus":0.009091394957203725,"score_gpt":0.24196715055334528,"score_spread":0.23287575559614154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069503593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898143,0.0026627032,0.00029003972,0.0047347797,0.0016026307,0.00060664763,0.00009716005,0.00004667764,0.00014506765],"genre_scores_gemma":[0.9956976,0.0011658592,0.000005918711,0.00022018855,0.0017331365,0.000060799743,0.000013133167,0.00002862395,0.0010747251],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99772084,0.00084713736,0.00076446333,0.00021704093,0.000061143415,0.00038937095],"domain_scores_gemma":[0.99802,0.000353161,0.0006513986,0.0005513045,0.00033767134,0.00008645468],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011955668,0.00026214562,0.0003399416,0.00024329797,0.001120533,0.00006882158,0.00034373425,0.00012607171,0.000991768],"category_scores_gemma":[0.00039980872,0.00012692717,0.00032612483,0.00063476124,0.00003633053,0.0002381819,0.00014001239,0.00061888655,0.0001166872],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008132808,0.0040419116,0.13439299,0.00016577423,0.002558763,0.0000072157873,0.007287556,0.024207696,0.736683,0.0006147375,0.07400082,0.00790673],"study_design_scores_gemma":[0.013804446,0.0024827064,0.76825,0.00013958958,0.006640374,0.0028643878,0.0013804131,0.00072579534,0.028242934,0.0011948012,0.17300166,0.0012728948],"about_ca_topic_score_codex":0.0002477315,"about_ca_topic_score_gemma":0.00010844328,"teacher_disagreement_score":0.70844007,"about_ca_system_score_codex":0.0000690827,"about_ca_system_score_gemma":0.00014851542,"threshold_uncertainty_score":0.99992144},"labels":[],"label_agreement":null},{"id":"W2069518501","doi":"10.1097/inf.0b013e318185608e","title":"PERTUSSIS VACCINE EFFECTIVENESS AFTER MASS IMMUNIZATION OF HIGH SCHOOL STUDENTS IN AUSTRALIA","year":2009,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Pertussis vaccine; Immunization; Pediatrics; Immunization program; Family medicine; Immunology; Antibody","score_opus":0.005982775798813559,"score_gpt":0.2588677286834676,"score_spread":0.252884952884654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069518501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99720204,0.00092197605,0.00016867944,0.000112333604,0.0012538021,0.00027603426,0.000016068516,0.000028448305,0.000020614685],"genre_scores_gemma":[0.9988169,0.00057493354,0.000005230014,0.00003871745,0.0003629885,0.000021086676,0.0000110100755,0.000011732973,0.00015741547],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850094,0.0005800928,0.0004358301,0.00015200286,0.000050152114,0.00028099745],"domain_scores_gemma":[0.99917305,0.00012803725,0.00023784407,0.00023342414,0.00016378301,0.00006384159],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005337953,0.00018475782,0.00028251996,0.00033973693,0.00021778887,0.00005406057,0.00022261369,0.0001258666,0.0010509213],"category_scores_gemma":[0.00018566134,0.00012552885,0.00013930691,0.0004905783,0.00002156534,0.00019966629,0.00004013701,0.00045456953,0.00009878134],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087602646,0.00051385886,0.98905474,0.000021835443,0.000083158135,0.00000706649,0.000058434118,0.0002563482,0.008575568,0.000044140404,0.00021205183,0.00029678803],"study_design_scores_gemma":[0.002503847,0.00026021778,0.9944903,0.000029553517,0.00026739662,0.00011257333,0.000014583371,0.0000014278943,0.00036572365,0.001767454,0.000046430854,0.00014045705],"about_ca_topic_score_codex":0.00020949176,"about_ca_topic_score_gemma":0.000014627284,"teacher_disagreement_score":0.008209844,"about_ca_system_score_codex":0.00011016707,"about_ca_system_score_gemma":0.00008328972,"threshold_uncertainty_score":0.99986225},"labels":[],"label_agreement":null},{"id":"W2069585626","doi":"10.1016/s0140-6736(08)61281-7","title":"Flu-like illness—and a rash","year":2008,"lang":"en","type":"article","venue":"The Lancet","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Rash; Maculopapular rash; Medicine; Emergency department; Medical illness; Pediatrics; Dermatology; Psychiatry; Illness behavior","score_opus":0.025960288725480393,"score_gpt":0.24574358883026481,"score_spread":0.21978330010478442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069585626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956533,0.0009787091,0.000011769408,0.0012266759,0.00081752543,0.00005555805,0.000015214354,0.000046478443,0.0011947983],"genre_scores_gemma":[0.9953011,0.00016824198,0.00000846665,0.00037195836,0.00020740277,0.000013716942,0.000010190264,0.000004108143,0.0039147767],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99967915,0.00006603325,0.000057355002,0.000070541326,0.0000040778173,0.00012284251],"domain_scores_gemma":[0.9997667,0.00003193489,0.000021092948,0.0001649116,0.000011013852,0.000004329704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008108632,0.00004821993,0.00012974448,0.000013442666,0.00046747422,0.000004843747,0.000089628964,0.000035815643,0.00029425946],"category_scores_gemma":[0.000007905475,0.000029576764,0.000018042714,0.000042569274,0.00007534139,0.00001958358,0.000061531224,0.00010973457,0.00019230477],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019362892,0.000063456384,0.025535978,0.000008170182,0.00012386359,0.0000024931273,0.0014129751,0.0000029659811,0.4501228,0.0030766502,0.5149852,0.004471807],"study_design_scores_gemma":[0.0010070393,0.000036795056,0.07510101,0.000003159979,0.000011263192,0.0005758224,0.000061026436,0.000001084528,0.0046464605,0.00026246745,0.9182147,0.000079216654],"about_ca_topic_score_codex":0.000089107525,"about_ca_topic_score_gemma":0.00001760908,"teacher_disagreement_score":0.44547632,"about_ca_system_score_codex":0.0000036349181,"about_ca_system_score_gemma":0.000007855314,"threshold_uncertainty_score":0.3595481},"labels":[],"label_agreement":null},{"id":"W2069957011","doi":"10.1128/jb.00558-09","title":"Functional Characterization of Lpt3 and Lpt6, the Inner-Core Lipooligosaccharide Phosphoethanolamine Transferases from <i>Neisseria meningitidis</i>","year":2009,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Neisseria meningitidis; Enzyme; Heptose; Escherichia coli; Transferase; Biochemistry; Chromatography; Chemistry; Biology; Bacteria; Gene","score_opus":0.01485864427555306,"score_gpt":0.22391788854840539,"score_spread":0.20905924427285233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069957011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960102,0.00071101624,0.00028536882,0.0011804745,0.0015841739,0.00009642935,0.00009594676,0.000012381573,0.000024051651],"genre_scores_gemma":[0.99856377,0.00062893244,0.00003979692,0.00021036758,0.00028987057,0.000002838776,0.000168994,0.00000916141,0.00008625936],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998863,0.00013909717,0.0006517768,0.00014806996,0.000018684907,0.000179416],"domain_scores_gemma":[0.9990045,0.00016095169,0.00047454704,0.00014659416,0.00018764076,0.00002580038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022171611,0.00017113428,0.0004642775,0.00011838364,0.00012675747,0.000017934166,0.00014472198,0.00022001418,0.00070240913],"category_scores_gemma":[0.000062613304,0.00011234769,0.00011800825,0.00011946314,0.00013070682,0.00020956747,0.000022531982,0.0002856736,0.000008110594],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006902019,0.00010166134,0.0046535833,0.0000042840215,0.00016345525,0.0000013880682,0.00022782365,0.0000011898677,0.9883062,0.0002831347,0.00020440592,0.005362656],"study_design_scores_gemma":[0.0011528209,0.0008770894,0.6027318,0.000043245407,0.00010658864,0.00049520435,0.000058506852,0.0000016610004,0.38713065,0.00035691087,0.006935966,0.0001095109],"about_ca_topic_score_codex":0.00006224059,"about_ca_topic_score_gemma":0.000012251388,"teacher_disagreement_score":0.60117555,"about_ca_system_score_codex":0.000015161761,"about_ca_system_score_gemma":0.000060108174,"threshold_uncertainty_score":0.76908875},"labels":[],"label_agreement":null},{"id":"W2070040034","doi":"10.1128/cvi.00669-14","title":"A Large Portion of Meningococcal Antigen Typing System-Negative Meningococcal Strains from Spain Is Killed by Sera from Adolescents and Infants Immunized with 4CMenB","year":2015,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Antigen; Meningococcal vaccine; Virology; Titer; Typing; Genotyping; Meningococcal disease; Biology; Microbiology; Antibody; Medicine; Immunology; Immunization; Genotype; Genetics; Bacteria; Gene","score_opus":0.021872680460295855,"score_gpt":0.28979991441842423,"score_spread":0.2679272339581284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070040034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944949,0.003178302,0.00026546294,0.00027888583,0.0007127728,0.00040922334,0.0005236525,0.000083890845,0.000052923362],"genre_scores_gemma":[0.9985581,0.00048464132,0.0001609834,0.00009495811,0.00008896939,0.000022871822,0.00047205063,0.000023032191,0.00009437682],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972555,0.00067595585,0.001052651,0.00057805935,0.000027831258,0.00040998426],"domain_scores_gemma":[0.9984904,0.00031245098,0.0005358499,0.00036585098,0.00020901595,0.00008645809],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00059522653,0.0003338557,0.0010943547,0.00010080012,0.00018833268,0.000026098793,0.00017940026,0.00056557305,0.00019568858],"category_scores_gemma":[0.00024411501,0.00025595404,0.00009376331,0.0001481246,0.0002228618,0.00015892433,0.000274473,0.00054711284,0.00003496059],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007323433,0.0007847906,0.6178823,0.0000370916,0.0023866757,0.000005650263,0.0022251522,3.4252082e-7,0.3610133,0.00014337254,0.001483654,0.006714224],"study_design_scores_gemma":[0.03699732,0.002369962,0.93102455,0.00057802413,0.00041611257,0.000085671396,0.003888636,0.0000952668,0.015584954,0.00020516649,0.008114691,0.0006396677],"about_ca_topic_score_codex":0.0020998002,"about_ca_topic_score_gemma":0.000119103446,"teacher_disagreement_score":0.34542835,"about_ca_system_score_codex":0.000021796197,"about_ca_system_score_gemma":0.000078649886,"threshold_uncertainty_score":0.9999893},"labels":[],"label_agreement":null},{"id":"W2071212938","doi":"10.4161/hv.22302","title":"The changing epidemiology of meningococcal disease in North America 1945–2010","year":2012,"lang":"en","type":"review","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Outbreak; Epidemiology; Meningococcal disease; Incidence (geometry); Vaccination; Case fatality rate; Neisseria meningitidis; Medicine; Public health; Environmental health; Disease; Meningococcal vaccine; Demography; Immunization; Virology; Immunology; Biology; Internal medicine","score_opus":0.08521329335298823,"score_gpt":0.3461897384074993,"score_spread":0.26097644505451106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071212938","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0047614253,0.9919918,0.000020960695,0.000049660634,0.0022342242,0.0007640853,0.00008080787,0.00006314934,0.000033892502],"genre_scores_gemma":[0.0054951343,0.99184155,0.000015210375,0.000055291468,0.0002984964,0.00024036581,0.0005732513,0.00010256633,0.0013781568],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957669,0.0011409374,0.0016439997,0.0004228051,0.000023043553,0.0010023477],"domain_scores_gemma":[0.9965053,0.0011934007,0.001156368,0.0010096334,0.0000902754,0.000044977536],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007354972,0.00065271056,0.0021794902,0.00047933272,0.0005618054,0.00001545179,0.00072078715,0.00051493023,0.00044641693],"category_scores_gemma":[0.000082455714,0.0004266728,0.0006647972,0.00065593695,0.0002229119,0.00008657629,0.0002513131,0.0008765719,0.00019916767],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012894739,0.0003423684,0.01170285,0.0018090428,0.0012329154,0.0000011182298,0.0005470639,0.00000275547,0.00018204236,0.0008729885,0.00016275333,0.9830152],"study_design_scores_gemma":[0.00050396135,0.000092124894,0.007141226,0.00076195627,0.0008415432,0.000019855781,0.000038707854,8.730448e-7,0.0000039562246,0.00004997189,0.9901311,0.00041471838],"about_ca_topic_score_codex":0.0002228525,"about_ca_topic_score_gemma":0.00031851567,"teacher_disagreement_score":0.98996836,"about_ca_system_score_codex":0.00008899466,"about_ca_system_score_gemma":0.0001192871,"threshold_uncertainty_score":0.9998185},"labels":[],"label_agreement":null},{"id":"W2071251197","doi":"10.1139/w08-057","title":"Differences in nitric oxide steady states between arginine, hypoxanthine, uracil auxotrophs (AHU) and non-AHU strains of<i>Neisseria gonorrhoeae</i>during anaerobic respiration in the presence of nitrite","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; National Institutes of Health","keywords":"Nitrite; Nitrite reductase; Hypoxanthine; Nitric oxide; Neisseria gonorrhoeae; Microbiology; Biology; Biochemistry; Chemistry; Nitrate; Enzyme; Endocrinology; Ecology","score_opus":0.020271220583959897,"score_gpt":0.2215091726064682,"score_spread":0.20123795202250833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071251197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971834,0.0020446817,0.000010421536,0.00019642965,0.00018116279,0.00018621689,0.0001716915,0.000002296816,0.000023735949],"genre_scores_gemma":[0.9993566,0.00041367076,0.00006739285,0.000025848229,0.000032538257,0.0000035802689,0.00003650082,0.0000065628724,0.00005727826],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998251,0.00042193435,0.0008234754,0.0001681668,0.000008045821,0.00032734752],"domain_scores_gemma":[0.9988953,0.0002786283,0.0004541199,0.00016576536,0.00015941971,0.00004675497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004354967,0.00017309989,0.00058091077,0.00086526293,0.00012629587,0.0000102174035,0.00030853797,0.00024128731,0.000040252206],"category_scores_gemma":[0.00016600489,0.00012979886,0.00006911546,0.00047686615,0.00036477167,0.00013604067,0.00002381897,0.00043626488,0.0000017153028],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066993976,0.000028668886,0.3871515,0.000025706395,0.000056140736,0.0000072352395,0.00060062174,0.000025877222,0.61173254,0.000026047079,0.000114553055,0.00016413211],"study_design_scores_gemma":[0.0014250488,0.00030738226,0.976458,0.00013283893,0.00003135735,0.00048323255,0.0005433687,0.0000013392114,0.02001533,0.000064302476,0.00041106483,0.00012675222],"about_ca_topic_score_codex":0.013553348,"about_ca_topic_score_gemma":0.031476475,"teacher_disagreement_score":0.5917172,"about_ca_system_score_codex":0.00005070084,"about_ca_system_score_gemma":0.0005839262,"threshold_uncertainty_score":0.99301547},"labels":[],"label_agreement":null},{"id":"W2071263701","doi":"10.1139/cjm-47-9-871","title":"Acid stress upregulated outer membrane proteins in clinical isolates of &lt;i&gt;Neisseria gonorrhoeae&lt;/i&gt;, but not most commensal &lt;i&gt;Neisseria&lt;/i&gt;","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Bacterial outer membrane; Neisseria gonorrhoeae; Neisseria; Microbiology; Biology; Neisseriaceae; Immune system; Bacteria; Escherichia coli; Antibiotics; Immunology; Biochemistry; Gene","score_opus":0.015587835326598817,"score_gpt":0.24407174899147713,"score_spread":0.2284839136648783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071263701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860184,0.0050094724,0.000045145967,0.0020251914,0.004987841,0.0006946404,0.00084381324,0.000042958218,0.00033253498],"genre_scores_gemma":[0.9958102,0.00076502905,0.00020537952,0.00061736413,0.0004498119,0.00002353827,0.0005117375,0.00009437293,0.0015225457],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99357784,0.0012589716,0.0028783851,0.00073184486,0.00002191886,0.0015310592],"domain_scores_gemma":[0.99594754,0.00035048393,0.0014068637,0.0007916443,0.0010387822,0.00046466055],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012844175,0.0007637669,0.0019762698,0.0010563368,0.00039624269,0.0000717346,0.0010757115,0.0017411715,0.0031654858],"category_scores_gemma":[0.0005406395,0.00070170255,0.00055490545,0.0006613068,0.0009408684,0.0003300403,0.00014707686,0.0011939846,0.00021038609],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011962926,0.0003644208,0.005491065,0.000049195263,0.0007517623,0.000067470944,0.00029666827,0.00004282149,0.9822051,0.00033202846,0.007691251,0.0015119606],"study_design_scores_gemma":[0.010019153,0.0029421167,0.04497601,0.0005847327,0.00039407998,0.008012827,0.00013007411,0.00001928229,0.390375,0.00008220307,0.54112506,0.0013395009],"about_ca_topic_score_codex":0.0013631213,"about_ca_topic_score_gemma":0.08019426,"teacher_disagreement_score":0.5918301,"about_ca_system_score_codex":0.0002926508,"about_ca_system_score_gemma":0.0014915973,"threshold_uncertainty_score":0.99955475},"labels":[],"label_agreement":null},{"id":"W2071630033","doi":"10.1016/s0264-410x(99)00415-6","title":"An adult formulation of a five-component acellular pertussis vaccine combined with diphtheria and tetanus toxoids is safe and immunogenic in adolescents and adults","year":2000,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Fraser Health; Grace (Canada); Chinook Regional Hospital; Dalhousie University; Izaak Walton Killam Health Centre","funders":"","keywords":"Pertactin; Medicine; Tetanus; Filamentous haemagglutinin adhesin; Diphtheria; Toxoid; Whooping cough; Bordetella pertussis; Vaccination; Immunology; Pertussis vaccine; Reactogenicity; Immunogenicity; Pertussis toxin; Antibody; Immunization; Internal medicine; Biology","score_opus":0.004119386283792495,"score_gpt":0.20370338537659613,"score_spread":0.19958399909280364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071630033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971546,0.0021205074,0.0000066220978,0.00021725113,0.00006344315,0.00037176412,0.000027446897,0.000021372123,0.000017019953],"genre_scores_gemma":[0.9986595,0.0009547674,0.00007059794,0.00004349202,0.00001703883,0.000010391371,0.00009042474,0.000017518052,0.0001362722],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990221,0.00008647152,0.00034091764,0.00031862347,0.000018491319,0.00021339631],"domain_scores_gemma":[0.99954253,0.00002108594,0.000097047545,0.00023274659,0.000070122085,0.000036456284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095117335,0.00021437283,0.00038625154,0.00012730598,0.00010743926,0.000017103232,0.00006539003,0.00015845489,0.0005277607],"category_scores_gemma":[0.000008581568,0.00016208219,0.000025536736,0.00014839276,0.000015548972,0.00018915429,0.000034777848,0.00012539851,0.0000048509946],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01093564,0.0005588977,0.32528505,0.00013738165,0.00015832233,0.0000025884997,0.0016467052,0.0000048316665,0.6256711,0.000037044905,0.000043737182,0.035518717],"study_design_scores_gemma":[0.01432158,0.001878275,0.95954585,0.0003138647,0.00007913599,0.00011840364,0.00021396836,0.0002765503,0.022369646,0.000033414577,0.0006003867,0.0002489286],"about_ca_topic_score_codex":0.001229246,"about_ca_topic_score_gemma":0.0004641352,"teacher_disagreement_score":0.63426083,"about_ca_system_score_codex":0.000014602903,"about_ca_system_score_gemma":0.00001102812,"threshold_uncertainty_score":0.660952},"labels":[],"label_agreement":null},{"id":"W2072130805","doi":"10.1111/j.1574-695x.2007.00299.x","title":"Population genetics and antibiotic susceptibility of invasive<i>Haemophilus influenzae</i>in Manitoba, Canada, from 2000 to 2006","year":2007,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; University of Manitoba; Public Health Agency of Canada","funders":"Health Canada","keywords":"Multilocus sequence typing; Serotype; Biology; Microbiology; Ampicillin; Haemophilus influenzae; Antibiotic resistance; Ciprofloxacin; Sulfamethoxazole; Virology; Amoxicillin; Typing; Antibiotics; Genotype; Genetics","score_opus":0.010911569753165462,"score_gpt":0.23272906805351115,"score_spread":0.2218174983003457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072130805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908512,0.005461201,0.000035958743,0.0005701138,0.0023794111,0.00036957354,0.00024872736,0.000031301075,0.00005250864],"genre_scores_gemma":[0.99834627,0.00024715433,0.00010261654,0.00062292925,0.00008976021,0.0000047576746,0.00050266663,0.000019396866,0.0000644754],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974263,0.00034793906,0.000957879,0.0005652539,0.000026032036,0.00067664817],"domain_scores_gemma":[0.99854976,0.000626199,0.00021574905,0.00041811328,0.000111557936,0.000078605175],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005912266,0.00029056857,0.00074797147,0.0002647267,0.00011460599,0.0000053692793,0.0003351174,0.001028969,0.0007193811],"category_scores_gemma":[0.0005384096,0.00027163114,0.000059880203,0.0002842768,0.0004775383,0.000042845946,0.00027216945,0.0005595121,0.000061839484],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025045872,0.00011780666,0.29353723,0.000011522584,0.00011856715,0.000011017469,0.00011352146,0.0000018438167,0.69795746,0.000043598728,0.0007096297,0.0071273833],"study_design_scores_gemma":[0.001598242,0.00032016422,0.8825584,0.00007156292,0.00003296665,0.00022460523,0.00020214848,4.1933964e-7,0.10462614,0.00010153554,0.010013868,0.00024992172],"about_ca_topic_score_codex":0.6946227,"about_ca_topic_score_gemma":0.94255066,"teacher_disagreement_score":0.5933313,"about_ca_system_score_codex":0.00023191852,"about_ca_system_score_gemma":0.0004479597,"threshold_uncertainty_score":0.9999736},"labels":[],"label_agreement":null},{"id":"W2072214162","doi":"10.1093/aje/kwn383","title":"Environmental Exposures and Invasive Meningococcal Disease: An Evaluation of Effects on Varying Time Scales","year":2008,"lang":"en","type":"article","venue":"American Journal of Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Allergy and Infectious Diseases; Hospital for Sick Children; University of Toronto; Australian National University","keywords":"Medicine; Meningococcal disease; Disease; Environmental health; Internal medicine; Neisseria meningitidis; Biology","score_opus":0.03083164936599775,"score_gpt":0.2968331313928073,"score_spread":0.26600148202680957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072214162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99681646,0.0025746562,0.00004556556,0.00020856768,0.00022173057,0.00009808579,0.0000075683492,0.0000052279793,0.000022166883],"genre_scores_gemma":[0.9990484,0.00045981442,0.00021631655,0.00013769335,0.00009873986,0.0000053385465,0.000015632837,0.000007939426,0.000010099683],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969496,0.0022344328,0.000470429,0.00014958796,0.000024902069,0.00017105322],"domain_scores_gemma":[0.99719936,0.0019177741,0.00064303674,0.00012515672,0.000053862124,0.000060818606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011924233,0.0001175777,0.000533942,0.00012770343,0.00010760633,0.0000011857369,0.000082908206,0.00006441297,0.00013775007],"category_scores_gemma":[0.0012285542,0.00008929291,0.000086240325,0.000047736023,0.0005428967,0.00009268251,0.00002658751,0.00016386653,0.000013847588],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000827646,0.00019736387,0.29158214,0.000008575483,0.00025438974,0.00000486392,0.0002769988,0.00017509767,0.65449816,0.00007984659,0.00033689087,0.051757988],"study_design_scores_gemma":[0.0015068759,0.0046399254,0.9728086,0.00006633733,0.00018522737,0.00064490736,0.00009125113,0.000038664606,0.01903249,0.0004864915,0.0003639816,0.00013522945],"about_ca_topic_score_codex":0.000036420744,"about_ca_topic_score_gemma":0.0000017758931,"teacher_disagreement_score":0.6812265,"about_ca_system_score_codex":0.000032834556,"about_ca_system_score_gemma":0.00005201881,"threshold_uncertainty_score":0.3641259},"labels":[],"label_agreement":null},{"id":"W2073276414","doi":"10.1016/j.vaccine.2010.03.075","title":"Changing epidemiology of invasive Haemophilus influenzae in Ontario, Canada: Evidence for herd effects and strain replacement due to Hib vaccination","year":2010,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":158,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; University Health Network; University of Toronto; Public Health Ontario; Hospital for Sick Children; Mount Sinai Hospital; Health Sciences Centre","funders":"Canadian Institutes of Health Research","keywords":"Serotype; Haemophilus influenzae; Vaccination; Epidemiology; Virology; Conjugate vaccine; Hib vaccine; Pasteurellaceae; Medicine; Incidence (geometry); Herd immunity; Microbiology; Biology; Immunology; Immunization; Internal medicine; Antibody; Antibiotics","score_opus":0.03192806939434886,"score_gpt":0.2889096060338953,"score_spread":0.2569815366395465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073276414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962066,0.00033333653,0.00016158524,0.0010936124,0.0013590099,0.0008005131,0.000020389814,0.00001306041,0.000011896158],"genre_scores_gemma":[0.99892026,0.000013022353,0.00031330698,0.00033107525,0.0000495108,0.00009137533,0.000041318493,0.000010087465,0.00023004418],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988664,0.00011360906,0.00040731134,0.00028566585,0.000010911482,0.00031612258],"domain_scores_gemma":[0.9981817,0.0013118418,0.00015999527,0.00020980339,0.00010351889,0.000033139706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007007025,0.00014779401,0.0004297928,0.00022630648,0.000087243985,0.0000030255183,0.00009295561,0.0001671751,0.00023964667],"category_scores_gemma":[0.0018047906,0.00013335278,0.000032154938,0.00015465269,0.0000055928676,0.000089703906,0.00008251832,0.00021980122,0.000002871323],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068143173,0.00005857921,0.3830091,0.00014989827,0.00007562017,0.0000024229357,0.00051268656,0.000026219614,0.60748625,0.00087431644,0.0015133242,0.0056101084],"study_design_scores_gemma":[0.0018320745,0.00051926577,0.9346891,0.00012157335,0.000026537333,0.00005164894,0.000046539713,0.000005010415,0.059180144,0.00024476773,0.003143226,0.00014012317],"about_ca_topic_score_codex":0.6893705,"about_ca_topic_score_gemma":0.99004436,"teacher_disagreement_score":0.55167997,"about_ca_system_score_codex":0.00013133237,"about_ca_system_score_gemma":0.00027104735,"threshold_uncertainty_score":0.54379684},"labels":[],"label_agreement":null},{"id":"W2073500708","doi":"10.1093/pch/14.8.518","title":"Un nouveau vaccin conjugué contre le méningocoque: Que devraient faire et savoir les médecins?","year":2009,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Paediatric Society","funders":"","keywords":"Humanities; Political science; Art","score_opus":0.015293226153829362,"score_gpt":0.2626784836344997,"score_spread":0.24738525748067033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073500708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44538343,0.17879333,0.0013912944,0.3544214,0.0109120915,0.0018234729,0.0007512128,0.00042542382,0.0060983514],"genre_scores_gemma":[0.947034,0.03742304,0.00041182074,0.009638831,0.0016609819,0.00002949937,0.0004882278,0.00006745515,0.0032461598],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952243,0.0012472757,0.0012323017,0.0008352181,0.000067169414,0.0013937645],"domain_scores_gemma":[0.9976173,0.00046063427,0.00073206617,0.00062379066,0.00027454,0.00029164294],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0012034333,0.00064916495,0.0010767473,0.0003747604,0.0017134142,0.000105944084,0.00037926834,0.001017328,0.0009116605],"category_scores_gemma":[0.00030253295,0.0006503539,0.00036257756,0.00068621855,0.00012252797,0.00029131002,0.00013675609,0.0016179318,0.0005123238],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006442307,0.0054229493,0.04999172,0.00057599024,0.000617573,0.000030468527,0.005024845,0.00012436352,0.0025104359,0.3595034,0.18968897,0.38586506],"study_design_scores_gemma":[0.0058784005,0.0016847176,0.21575937,0.0002527333,0.00013953779,0.00038412597,0.00050975103,0.000010334243,0.00065768475,0.0018256422,0.7721035,0.0007942391],"about_ca_topic_score_codex":0.0089872945,"about_ca_topic_score_gemma":0.0026717426,"teacher_disagreement_score":0.5824145,"about_ca_system_score_codex":0.00040022042,"about_ca_system_score_gemma":0.0014264351,"threshold_uncertainty_score":0.99959475},"labels":[],"label_agreement":null},{"id":"W2073565853","doi":"10.1016/j.annemergmed.2014.10.022","title":"Repeated Emergency Department Visits Among Children Admitted With Meningitis or Septicemia: A Population-Based Study","year":2014,"lang":"en","type":"article","venue":"Annals of Emergency Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; Institute for Clinical Evaluative Sciences; University of Toronto; SickKids Foundation; Hospital for Sick Children; St. Michael's Hospital","funders":"","keywords":"Medicine; Emergency department; Triage; Meningitis; Pediatrics; Population; Generalized estimating equation; Emergency medicine; Retrospective cohort study; Cohort study; Cohort; Internal medicine","score_opus":0.04116001500805132,"score_gpt":0.332945851502828,"score_spread":0.2917858364947767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073565853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99656904,0.00031112382,0.00008942699,0.00039025012,0.0014054092,0.0006645656,0.000022059423,0.00009350947,0.00045461263],"genre_scores_gemma":[0.9975837,0.00011727546,0.000013383588,0.00002898216,0.0001792164,0.00006586669,0.00052809075,0.00002771865,0.001455786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980931,0.0002698653,0.0008586372,0.00038311267,0.00006539816,0.00032986846],"domain_scores_gemma":[0.99863565,0.000058555626,0.00042570705,0.00044172985,0.00037793274,0.000060412454],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043863218,0.00027227125,0.00052279944,0.00020423855,0.00019992341,0.0000018114763,0.00016227958,0.00014019999,0.018415578],"category_scores_gemma":[0.00032607577,0.00017515977,0.00009009788,0.00052471185,0.00003227168,0.00009732914,0.000031721866,0.00015833882,0.000031214713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049240683,0.0005757433,0.97530276,0.000022898852,0.00062555616,0.0000010284087,0.00022816921,0.00002570976,0.011794242,0.000030866722,0.01017603,0.00072458823],"study_design_scores_gemma":[0.00202392,0.004515207,0.9879579,0.00008943979,0.00025284418,0.0000050461454,0.00009819556,0.00001392097,0.0037162835,0.000017951705,0.0010880881,0.00022121378],"about_ca_topic_score_codex":0.002634145,"about_ca_topic_score_gemma":0.0015908197,"teacher_disagreement_score":0.018384364,"about_ca_system_score_codex":0.0000083106115,"about_ca_system_score_gemma":0.000026153608,"threshold_uncertainty_score":0.9824817},"labels":[],"label_agreement":null},{"id":"W2073622709","doi":"10.2165/00148581-200507020-00005","title":"Economic Evaluation of an Extended Acellular Pertussis Vaccine Program for Adolescents in Qu??bec, Canada","year":2005,"lang":"en","type":"article","venue":"Pediatric Drugs","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Institut National de Santé Publique du Québec; Brock University; PharmIdeas (Canada)","funders":"","keywords":"Medicine; Whooping cough; Pediatrics; Cost effectiveness; Booster (rocketry); Booster dose; Vaccination; Pertussis vaccine; Public health; Cost-effectiveness analysis; Immunization; Demography; Immunology; Nursing","score_opus":0.01036095678445406,"score_gpt":0.26827204829688944,"score_spread":0.2579110915124354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073622709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971505,0.0010044575,0.0000042587158,0.00022059627,0.0007713338,0.0007089518,0.000044232696,0.000024622484,0.00007106886],"genre_scores_gemma":[0.999052,0.00007966649,0.00009402565,0.000018690856,0.0003097107,0.00015422628,0.00016452374,0.000012369176,0.00011481261],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9990934,0.000108559805,0.00033505692,0.00021533329,0.000022478334,0.00022514237],"domain_scores_gemma":[0.99953115,0.000032917713,0.00013625696,0.00017945291,0.00009811281,0.000022090364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042363815,0.00011592376,0.000208034,0.00012793536,0.000058503072,0.0000075035514,0.0001085388,0.00011325283,0.00032222134],"category_scores_gemma":[0.00003872612,0.000108575165,0.000049190316,0.000096047785,0.0000072836815,0.00011354128,0.000021726535,0.00007985122,0.000016437225],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008590977,0.002930202,0.15002455,0.00024698002,0.00016390046,4.880374e-7,0.00091556803,0.0011426023,0.031995986,0.00017751838,0.016119128,0.795424],"study_design_scores_gemma":[0.018960096,0.0007657162,0.86548597,0.000035913305,0.0008694671,0.000018842607,0.00050076755,0.0053654397,0.025594583,0.00015661317,0.08140896,0.00083765213],"about_ca_topic_score_codex":0.08125573,"about_ca_topic_score_gemma":0.31578594,"teacher_disagreement_score":0.79458636,"about_ca_system_score_codex":0.00021804245,"about_ca_system_score_gemma":0.00044728277,"threshold_uncertainty_score":0.92486227},"labels":[],"label_agreement":null},{"id":"W2074133279","doi":"10.1016/j.jinf.2006.09.003","title":"Respiratory viruses do not trigger meningococcal disease in children","year":2006,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children","keywords":"Meningococcal disease; Medicine; Virology; Coronavirus disease 2019 (COVID-19); Respiratory disease; 2019-20 coronavirus outbreak; Immunology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Disease; Neisseria meningitidis; Biology; Infectious disease (medical specialty); Outbreak; Lung; Pathology; Internal medicine; Bacteria; Genetics","score_opus":0.01320675273255393,"score_gpt":0.25996813756994736,"score_spread":0.24676138483739343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074133279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99810666,0.0005222531,0.00006264584,0.0000473331,0.0010114297,0.00007921248,0.0000046722616,0.000016426733,0.00014935534],"genre_scores_gemma":[0.9994052,0.000027868142,0.0000060079506,0.00007250508,0.000397017,0.0000036316967,0.0000031670686,0.0000079716665,0.00007664418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99922085,0.00013322274,0.00041501666,0.00008571133,0.00001683445,0.00012837719],"domain_scores_gemma":[0.9995263,0.0000360672,0.00025297177,0.00007855679,0.000087875946,0.000018210016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027958327,0.00009181964,0.00017468886,0.00030632858,0.00008102252,0.00002391884,0.00004041453,0.0001133118,0.00028894306],"category_scores_gemma":[0.00006458162,0.00007340898,0.0001174245,0.0001516426,0.000030156023,0.00022763018,0.000014622449,0.00024987978,0.00005185768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003094366,0.00020549975,0.7764853,0.0000025228117,0.000039085422,0.0000015199703,0.000009753426,0.00010292158,0.21969907,0.00017104413,0.0020027035,0.0009711209],"study_design_scores_gemma":[0.0014977813,0.00018558497,0.9323325,0.00002752431,0.00003463679,0.00008884187,0.0000015438588,4.3702252e-7,0.023136238,0.00012540977,0.04248979,0.00007971003],"about_ca_topic_score_codex":0.00047357337,"about_ca_topic_score_gemma":0.000052555515,"teacher_disagreement_score":0.19656284,"about_ca_system_score_codex":0.000060496983,"about_ca_system_score_gemma":0.000051131443,"threshold_uncertainty_score":0.3163724},"labels":[],"label_agreement":null},{"id":"W2074692048","doi":"10.1073/pnas.1324149111","title":"Toward a new vaccine for pertussis","year":2014,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Bordetella pertussis; Pertussis toxin; Pertactin; Pertussis vaccine; Whooping cough; Conjugate vaccine; Conjugate; Antibody; Bordetella; Microbiology; Virology; Toxoid; Immunity; Medicine; Immunology; Immunogenicity; Biology; Vaccination; Immunization; Immune system; Bacteria; G protein; Internal medicine","score_opus":0.051604921678760345,"score_gpt":0.3031223460811866,"score_spread":0.25151742440242625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074692048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98705757,0.0001498054,0.000016399417,0.009517502,0.00011047809,0.00016033858,0.0000108879085,0.000013775744,0.0029632302],"genre_scores_gemma":[0.9983479,0.000011507549,0.0005305681,0.00016221852,0.000096555654,0.000007164124,2.0654144e-7,0.000001992501,0.00084191957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995595,0.0000037518187,0.00017735816,0.00012171645,0.00004102893,0.000096632255],"domain_scores_gemma":[0.99953973,0.00011060316,0.00018767762,0.000004040098,0.00014960613,0.000008310609],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005356311,0.000053582622,0.000115543684,0.00007852194,0.00015292923,0.000008428257,0.0003214917,0.00008071712,0.00006527111],"category_scores_gemma":[0.00051844446,0.000031424537,0.00006842136,0.00022526701,0.000120596,0.00014827817,0.000053576867,0.000060779665,0.0000031848103],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024714007,0.000020540774,0.0020128428,0.000018771252,0.000016997548,2.4133917e-11,0.00006946313,0.0000024247752,0.9186639,0.0683153,0.009295054,0.0015599888],"study_design_scores_gemma":[0.0006293549,0.0001490813,0.059113625,0.000041286552,0.000022479684,0.000011298527,0.00006061741,0.00005705141,0.84373295,0.050660394,0.04544631,0.00007554582],"about_ca_topic_score_codex":0.000014829355,"about_ca_topic_score_gemma":8.4069406e-8,"teacher_disagreement_score":0.07493095,"about_ca_system_score_codex":0.0000073308724,"about_ca_system_score_gemma":0.000016980512,"threshold_uncertainty_score":0.12814555},"labels":[],"label_agreement":null},{"id":"W2074763389","doi":"10.3201/eid1406.071357","title":"Serogroup Y Meningococcal Disease, Colombia","year":2008,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Medicine; Outbreak; Meningitis; Meningococcal disease; Penicillin; Meningococcal vaccine; Antibiogram; Virology; Microbiology; Antibiotics; Antibiotic resistance; Pediatrics; Immunization; Biology; Immunology; Antibody","score_opus":0.011005623753801132,"score_gpt":0.23613879782928476,"score_spread":0.22513317407548364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074763389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6260827,0.03133688,0.0001708884,0.27119786,0.047362197,0.0033901087,0.004043217,0.0076788845,0.00873726],"genre_scores_gemma":[0.5872616,0.0033307788,0.000017339587,0.31980014,0.01840429,0.0017383121,0.022829805,0.00074126647,0.04587647],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973053,0.0003513077,0.0005436871,0.00084177026,0.000061319144,0.0008966156],"domain_scores_gemma":[0.9984944,0.00021141762,0.00031887676,0.000706215,0.00016986675,0.00009921693],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000057713252,0.00071925484,0.00076600065,0.00040141988,0.0009460671,0.00009517189,0.000331159,0.0009696678,0.004215312],"category_scores_gemma":[0.00015113635,0.0007031135,0.0005871657,0.00034065897,0.0002750887,0.00019267775,0.00019176544,0.0015726296,0.0017577334],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005437549,0.00022601704,0.024248866,0.000117227304,0.00058445847,0.00011862432,0.000047157973,0.000009423683,0.00076188537,0.00003328375,0.9730024,0.00079628464],"study_design_scores_gemma":[0.0010303805,0.00015376403,0.01487192,0.000104057086,0.00051280874,0.000199532,0.0000070705346,0.000002134758,0.000089283785,0.00013765445,0.9821012,0.00079019653],"about_ca_topic_score_codex":0.00031707826,"about_ca_topic_score_gemma":0.000018189518,"teacher_disagreement_score":0.04860227,"about_ca_system_score_codex":0.00015265962,"about_ca_system_score_gemma":0.00022964166,"threshold_uncertainty_score":0.999542},"labels":[],"label_agreement":null},{"id":"W2075191509","doi":"10.1007/s10719-010-9309-y","title":"Investigating the candidacy of LPS-based glycoconjugates to prevent invasive meningococcal disease: immunology of glycoconjugates with high carbohydrate loading","year":2010,"lang":"en","type":"article","venue":"Glycoconjugate Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Steacie Institute for Molecular Sciences; Institute for Biological Sciences","funders":"Beijing Advanced Innovation Center for Structural Biology, Tsinghua University","keywords":"Glycoconjugate; Epitope; Microbiology; Antibody; Antigen; Biology; Neisseria meningitidis; Lipopolysaccharide; Immunology; Virology; Bacteria; Biochemistry","score_opus":0.008024731816621524,"score_gpt":0.23090129349819613,"score_spread":0.2228765616815746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075191509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950837,0.00050441996,0.00007146846,0.0016711941,0.0015936162,0.00081945455,0.0001001876,0.000051903782,0.00010406072],"genre_scores_gemma":[0.998804,0.000053813033,0.00040331995,0.00018277501,0.00022226742,0.00010819424,0.000049296414,0.000052337848,0.00012400479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731296,0.00036111084,0.0011134207,0.0004151857,0.00009420421,0.00070314104],"domain_scores_gemma":[0.9968897,0.00067185133,0.0010392112,0.0006178726,0.0005850729,0.00019626562],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007257168,0.0004614995,0.0007735985,0.00035488443,0.000648017,0.00008957517,0.0006675297,0.00026697046,0.00078302063],"category_scores_gemma":[0.00062637846,0.00029870027,0.00023271157,0.0004983406,0.000778892,0.00026257045,0.00017867153,0.001124338,0.000042187414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007455143,0.00022176077,0.014470976,0.000056566027,0.00054104626,0.00000840409,0.0005728752,0.00036212246,0.98096424,0.001218036,0.0002973841,0.00054110144],"study_design_scores_gemma":[0.0028011922,0.0012209165,0.024786726,0.00040458783,0.00030280443,0.00030263083,0.0003132473,0.00001607581,0.96482885,0.0008654016,0.0037262102,0.00043136138],"about_ca_topic_score_codex":0.0013083664,"about_ca_topic_score_gemma":0.0007062712,"teacher_disagreement_score":0.016135368,"about_ca_system_score_codex":0.000053319272,"about_ca_system_score_gemma":0.0007379018,"threshold_uncertainty_score":0.99994653},"labels":[],"label_agreement":null},{"id":"W2075823838","doi":"10.1111/j.1440-1754.2005.00663.x","title":"Adverse reactions to immunization with newer vaccines in the very preterm infant","year":2005,"lang":"en","type":"article","venue":"Journal of Paediatrics and Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ottawa Mental Health Centre","funders":"National Medical Research Council; National Health and Medical Research Council","keywords":"Medicine; Immunization; Gestational age; Pediatrics; Adverse effect; Diphtheria; Jaundice; Tetanus; Vaccination; Poliomyelitis; Pregnancy; Immunology; Internal medicine; Antibody","score_opus":0.007700421730777423,"score_gpt":0.2492792520557757,"score_spread":0.24157883032499827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075823838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838024,0.0020256445,0.00011548584,0.013391788,0.00039327942,0.0001408675,0.000005001368,0.0000046569985,0.00012088731],"genre_scores_gemma":[0.9952191,0.0031746407,0.00013458365,0.0010484785,0.00036983754,0.0000022314987,0.0000053935255,0.0000054869492,0.000040249655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993281,0.00010174208,0.000346798,0.00006599493,0.000020201343,0.00013719626],"domain_scores_gemma":[0.99948776,0.000064726446,0.00024378233,0.000093900824,0.000082210616,0.000027598668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044141815,0.00007353268,0.0001584531,0.00020204017,0.00018879457,0.000014364067,0.00007492479,0.000057824545,0.000036824367],"category_scores_gemma":[0.000037876915,0.000042379987,0.000032132346,0.00026299193,0.0000092322,0.00013788155,0.00001548987,0.00027121397,0.000005159739],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002495967,0.002071861,0.8261923,0.00025683353,0.0004119026,0.000012301746,0.024933029,0.0024647985,0.00726893,0.0035698507,0.05802821,0.07229401],"study_design_scores_gemma":[0.0017200959,0.00093566097,0.7264058,0.00007930235,0.00003260534,0.00065768644,0.000556731,0.000003795218,0.000087055916,0.000024286923,0.26939866,0.00009835205],"about_ca_topic_score_codex":0.00017399677,"about_ca_topic_score_gemma":0.00031340105,"teacher_disagreement_score":0.21137044,"about_ca_system_score_codex":0.000031425923,"about_ca_system_score_gemma":0.00008170582,"threshold_uncertainty_score":0.17282058},"labels":[],"label_agreement":null},{"id":"W2076060995","doi":"10.1007/s10719-013-9500-z","title":"Investigating the candidacy of LPS-based glycoconjugates to prevent invasive meningococcal disease: conjugates based on core oligosaccharides","year":2013,"lang":"en","type":"article","venue":"Glycoconjugate Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Glycoconjugate; Epitope; Antigen; Neisseria meningitidis; Immune system; Lipopolysaccharide; Lipid A; Biology; Microbiology; Antigenicity; Chemistry; Immunology; Biochemistry; Bacteria; Genetics","score_opus":0.01946839339821425,"score_gpt":0.2580597032091208,"score_spread":0.23859130981090657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076060995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920676,0.00037203133,0.00009517054,0.00484783,0.0010405115,0.00119033,0.00009939157,0.000068069865,0.00021907434],"genre_scores_gemma":[0.99709755,0.000033321587,0.00018177718,0.001878591,0.00022920831,0.0002559797,0.000067057554,0.000041890664,0.00021462384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976606,0.000326785,0.0008871386,0.00038177054,0.00009643192,0.00064732536],"domain_scores_gemma":[0.9972657,0.00095074537,0.00057840894,0.0004937871,0.00044755242,0.00026382427],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005508375,0.00042459366,0.00052934577,0.0002729799,0.00080801285,0.00019656887,0.0005328879,0.00018172683,0.003054186],"category_scores_gemma":[0.00095749553,0.0002775394,0.00027895317,0.0003238819,0.0003295978,0.00024281103,0.000103123086,0.0006431918,0.00045259725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038216443,0.00039360052,0.02062579,0.00006828323,0.00024105476,0.0000060764023,0.00038571307,0.0024395608,0.9599357,0.000539745,0.013295497,0.0016868159],"study_design_scores_gemma":[0.0053963885,0.0024874862,0.06603155,0.0014615222,0.00034107806,0.00017154918,0.00059804774,0.0008952804,0.89970577,0.0029813899,0.01888275,0.001047177],"about_ca_topic_score_codex":0.000686669,"about_ca_topic_score_gemma":0.00007812874,"teacher_disagreement_score":0.06022992,"about_ca_system_score_codex":0.00009289134,"about_ca_system_score_gemma":0.0005289398,"threshold_uncertainty_score":0.9999677},"labels":[],"label_agreement":null},{"id":"W2076119846","doi":"10.1053/spid.2003.127226","title":"Mycoplasma pneumoniae ecephalitis","year":2003,"lang":"en","type":"review","venue":"Seminars in Pediatric Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Mycoplasma pneumoniae; Medicine; Encephalitis; Immunology; Immune system; Acute disseminated encephalomyelitis; Antibiotics; Meningoencephalitis; Azithromycin; Doxycycline; Pneumonia; Microbiology; Virus; Internal medicine; Multiple sclerosis; Biology","score_opus":0.01265384499050381,"score_gpt":0.2760124838867111,"score_spread":0.2633586388962073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076119846","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028368619,0.985777,0.000001818681,0.0000032597823,0.006172898,0.0007934708,0.0004926153,0.0002505962,0.0036714827],"genre_scores_gemma":[0.0007248305,0.99570453,0.0000033664455,0.000018142411,0.0004965305,0.00047786473,0.00075038354,0.00010455471,0.0017198194],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967516,0.0006978003,0.0009829254,0.0007777518,0.000036182464,0.00075371895],"domain_scores_gemma":[0.99825335,0.0005340477,0.0004885224,0.0005732504,0.000074158335,0.00007666982],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019842853,0.0007765502,0.0019105033,0.0010101104,0.00025453835,0.00006210955,0.00029295194,0.0010413991,0.0014866975],"category_scores_gemma":[0.00023524709,0.00070320704,0.0007352351,0.0011863211,0.00008961161,0.00014201748,0.00013296385,0.0007661101,0.0017447418],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012148527,0.001020188,0.030748319,0.009118044,0.00032457558,0.000054654276,0.00005260679,0.0000018192771,0.0000030046574,0.0002542857,0.021728897,0.93668145],"study_design_scores_gemma":[0.0005995102,0.00015333001,0.00015299635,0.0013448774,0.0018823299,0.0016862277,0.000009945138,4.1565585e-8,6.4285405e-7,0.00012721996,0.9932975,0.0007453913],"about_ca_topic_score_codex":0.000078470934,"about_ca_topic_score_gemma":0.00004558299,"teacher_disagreement_score":0.9715686,"about_ca_system_score_codex":0.00028421037,"about_ca_system_score_gemma":0.00047707453,"threshold_uncertainty_score":0.9995419},"labels":[],"label_agreement":null},{"id":"W2076334358","doi":"10.1016/j.vaccine.2009.12.060","title":"Pertussis immunization in paediatric healthcare workers: Knowledge, attitudes, beliefs, and behaviour","year":2010,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Sanofi Pasteur; IWK Health Centre; Clinical Trial Center, China Medical University Hospital","keywords":"Medicine; Diphtheria; Immunization; Pertussis vaccine; Tetanus; Family medicine; Health care; Whooping cough; Public health; Vaccination; Pediatrics; Nursing; Immunology","score_opus":0.009712702628222927,"score_gpt":0.2659478665260386,"score_spread":0.25623516389781564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076334358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99120003,0.0062166844,0.000006325564,0.00094083167,0.0013229613,0.00016529174,0.000011706846,0.00006300146,0.00007317746],"genre_scores_gemma":[0.99821424,0.00060486153,0.000074946525,0.000027246459,0.00015506912,0.000014510318,0.00012436791,0.000015845515,0.0007688944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99923366,0.00008237183,0.0002392195,0.00021603626,0.000007323757,0.00022137412],"domain_scores_gemma":[0.9995715,0.00005743605,0.000059925373,0.00021206065,0.00007318029,0.00002588732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001741205,0.00013369562,0.00019855287,0.00022160467,0.00015670985,0.00002018084,0.00008880215,0.00026732133,0.00049728196],"category_scores_gemma":[0.00005304637,0.00011485715,0.00003056765,0.0003433195,0.000010359508,0.00010630538,0.00008527733,0.00038845948,0.000099823395],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003496054,0.000187417,0.92411715,0.000018164375,0.000016405033,5.093552e-7,0.00018815487,3.2745902e-7,0.063205734,0.00021545035,0.0011708132,0.010844909],"study_design_scores_gemma":[0.0012251579,0.000091578055,0.98047173,0.000022631582,0.00001801816,0.000041739608,0.000058857084,0.0000018503849,0.0015323919,0.000023164604,0.01637961,0.00013324512],"about_ca_topic_score_codex":0.0013923809,"about_ca_topic_score_gemma":0.005776299,"teacher_disagreement_score":0.06167334,"about_ca_system_score_codex":0.000017978895,"about_ca_system_score_gemma":0.0000412443,"threshold_uncertainty_score":0.54448885},"labels":[],"label_agreement":null},{"id":"W2076432349","doi":"10.1159/000231605","title":"Induction and Suppression of Reagins in the Neonatal Mouse","year":2009,"lang":"en","type":"article","venue":"International Archives of Allergy and Applied Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Ovalbumin; Immunology; Bordetella pertussis; Immunoglobulin E; Spleen; Lymph; Concanavalin A; Bone marrow; Antibody; Biology; Immune system; Medicine; Pathology","score_opus":0.007111734882203783,"score_gpt":0.2243581288386167,"score_spread":0.2172463939564129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076432349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959425,0.00045077997,0.000071071554,0.0007119668,0.00017867185,0.000066301836,0.00001073998,0.000006191302,0.0025617853],"genre_scores_gemma":[0.99893546,0.0007884425,0.00007015274,0.000032048396,0.000016463922,0.000005488565,0.00004881769,0.0000022515167,0.00010085474],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995601,0.00004643843,0.00019072794,0.000113329435,0.000010742204,0.000078660356],"domain_scores_gemma":[0.9997177,0.00009771003,0.00008594662,0.00008312363,0.000011877563,0.0000036567144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000052155767,0.000069159876,0.00012412912,0.00012542715,0.000040736675,0.0000037377786,0.00012287321,0.000072356605,0.000044347544],"category_scores_gemma":[0.000011394689,0.000049561582,0.000020771688,0.00003388257,0.00019535034,0.000040191633,0.00005020991,0.00013593516,0.0000010249964],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004498929,0.00009963423,0.00020459361,0.000001610863,0.000102256694,1.7520641e-7,0.0010113658,0.0000047036074,0.89683795,0.042764448,0.00002590533,0.05849749],"study_design_scores_gemma":[0.0023548668,0.00041255812,0.5841001,0.00003424352,0.00000922896,0.00014314754,0.0010533105,0.000010927084,0.37911925,0.012948394,0.019684713,0.0001292636],"about_ca_topic_score_codex":0.00009472616,"about_ca_topic_score_gemma":0.000026823618,"teacher_disagreement_score":0.5838955,"about_ca_system_score_codex":0.0000020170237,"about_ca_system_score_gemma":0.00000659298,"threshold_uncertainty_score":0.20210627},"labels":[],"label_agreement":null},{"id":"W2077143090","doi":"10.1016/j.vaccine.2007.04.045","title":"Monitoring of adverse events during the 2003 mass vaccination campaign with a trivalent meningococcal A/C/W135 polysaccharide vaccine in Burkina Faso","year":2007,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Vaccination; Medicine; Adverse effect; Meningococcal vaccine; Meningococcal meningitis; Immunization; Meningitis; Neisseria meningitidis; Meningococcal disease; Pediatrics; Immunology; Internal medicine; Biology; Antigen","score_opus":0.008713139607782217,"score_gpt":0.24432451525892293,"score_spread":0.2356113756511407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077143090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970998,0.0005861031,0.00054124696,0.00013715385,0.0009189755,0.0005775758,0.000010013342,0.00006147444,0.000067658584],"genre_scores_gemma":[0.9986721,0.00014464321,0.0001757757,0.000009379955,0.00016614275,0.000028430568,0.000013125746,0.000029842087,0.00076054764],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983734,0.00012500117,0.00062634144,0.00032866743,0.000048542926,0.0004980727],"domain_scores_gemma":[0.9989561,0.00011406999,0.00030159357,0.00038092965,0.00021232259,0.00003497458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062961434,0.0002705767,0.0004019602,0.00036642296,0.0001996611,0.000004895709,0.00023708434,0.00019233506,0.00042370128],"category_scores_gemma":[0.00009344638,0.00018330965,0.000073353505,0.00090469164,0.0000063177054,0.00019203855,0.0000727379,0.0003528313,0.000030799154],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001060055,0.00013071334,0.49849916,0.000027230928,0.000097267846,0.0000046058767,0.00023789212,0.00005377833,0.49892887,0.000036886628,0.000025824469,0.00089770654],"study_design_scores_gemma":[0.0043477486,0.00020893446,0.7056942,0.00009493513,0.000047949183,0.000059597463,0.00042847337,0.000004327685,0.28833374,0.000014352462,0.0006076503,0.00015807143],"about_ca_topic_score_codex":0.00056499726,"about_ca_topic_score_gemma":0.0002568872,"teacher_disagreement_score":0.21059513,"about_ca_system_score_codex":0.00014131854,"about_ca_system_score_gemma":0.00004540201,"threshold_uncertainty_score":0.7475151},"labels":[],"label_agreement":null},{"id":"W2077143739","doi":"10.1586/erv.13.30","title":"Controlling serogroup B invasive meningococcal disease: the Canadian perspective","year":2013,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Izaak Walton Killam Health Centre; BC Children's Hospital; University of Toronto; Dalhousie University; Public Health Ontario; University of British Columbia","funders":"","keywords":"Meningococcal vaccine; Meningococcal disease; Immunization; Medicine; Neisseria meningitidis; Disease; Epidemiology; Disease burden; Public health; Vaccination; Environmental health; Conjugate vaccine; Virology; Immunology; Population; Biology; Antigen","score_opus":0.03402294262193077,"score_gpt":0.3387347770123367,"score_spread":0.3047118343904059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077143739","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000005278946,0.9939001,0.000002145795,0.0011415929,0.0015845789,0.0025899664,0.00011177753,0.000041665295,0.0006228586],"genre_scores_gemma":[0.000052792282,0.9969016,0.000019620935,0.000380051,0.00050821155,0.0011545381,0.00031509725,0.000056358494,0.0006117773],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99735236,0.00067760533,0.0009851906,0.00048350476,0.000033288885,0.0004680378],"domain_scores_gemma":[0.99744797,0.0004935646,0.0006756295,0.00075893174,0.0005131247,0.000110778994],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036224257,0.00060943887,0.0025234863,0.00019893885,0.00045024665,0.000050846822,0.0006444702,0.0003649958,0.0034345242],"category_scores_gemma":[0.00069051195,0.00032774924,0.0010145429,0.0003710139,0.000092993956,0.00011911986,0.00011500761,0.00049529126,0.00060117693],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022548216,0.00015101803,0.00001927273,0.05220603,0.0028258823,0.0000063244247,0.000324069,1.05823815e-7,0.00015362845,0.0056089265,0.15574269,0.7829395],"study_design_scores_gemma":[0.00021762724,0.000045378292,0.000011945271,0.055208996,0.0008211128,0.00006624753,0.00006219049,7.09401e-8,0.000010570612,0.000034133296,0.94319826,0.00032345578],"about_ca_topic_score_codex":0.082017295,"about_ca_topic_score_gemma":0.025494106,"teacher_disagreement_score":0.78745556,"about_ca_system_score_codex":0.00024917323,"about_ca_system_score_gemma":0.0010947738,"threshold_uncertainty_score":0.99991745},"labels":[],"label_agreement":null},{"id":"W2077379963","doi":"10.1016/j.vaccine.2015.02.015","title":"Immunogenicity and safety of 3-dose primary vaccination with combined DTPa-HBV-IPV/Hib vaccine in Canadian Aboriginal and non-Aboriginal infants","year":2015,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; BC Children's Hospital","funders":"GlaxoSmithKline","keywords":"Medicine; Immunogenicity; Hib vaccine; Vaccination; Hepatitis B; Hepatitis B virus; Dosing; Pediatrics; Hepatitis B vaccine; Immune system; Immunology; Internal medicine; HBsAg; Conjugate vaccine; Virus","score_opus":0.005960685958479253,"score_gpt":0.2426279851270131,"score_spread":0.23666729916853385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077379963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965008,0.0014413303,0.000016031154,0.00056473754,0.0003805269,0.00043630198,0.0000690746,0.000029183197,0.00056204613],"genre_scores_gemma":[0.9986693,0.0006214247,0.00013018344,0.00006304537,0.00004715744,0.00001354199,0.00019382994,0.00002182261,0.00023969333],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986223,0.00010433599,0.0004582222,0.00034383577,0.000032966764,0.00043834964],"domain_scores_gemma":[0.99910426,0.00006339896,0.00017635529,0.00027721937,0.0002438226,0.00013495139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004467696,0.00027066233,0.00053667015,0.00042678026,0.00013331485,0.000022365019,0.00012631992,0.00022308546,0.00019520409],"category_scores_gemma":[0.000032111268,0.00022479068,0.000028566472,0.00043771663,0.000017937744,0.0002967303,0.00004010265,0.0002741811,0.000013098773],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0067096488,0.00022382509,0.9205761,0.00007228431,0.00018324953,0.000011085116,0.00046556807,0.000010798808,0.06651202,0.00062058296,0.0010777732,0.0035370928],"study_design_scores_gemma":[0.013365178,0.001039693,0.9490204,0.000069021095,0.00006917681,0.00017454044,0.00007648108,0.000018798648,0.005232819,0.000055102148,0.030613676,0.00026510656],"about_ca_topic_score_codex":0.15362698,"about_ca_topic_score_gemma":0.17779855,"teacher_disagreement_score":0.061279204,"about_ca_system_score_codex":0.00016665051,"about_ca_system_score_gemma":0.00053466577,"threshold_uncertainty_score":0.9166698},"labels":[],"label_agreement":null},{"id":"W2077396218","doi":"10.1016/s0168-1656(00)00294-7","title":"Candidate Neisseria meningitidis NspA vaccine","year":2000,"lang":"en","type":"article","venue":"Journal of Biotechnology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Neisseria meningitidis; Microbiology; Monoclonal antibody; Meningococcal vaccine; Recombinant DNA; Epitope; Neisseria; Chemistry; Virology; Immunization; Antibody; Biology; Bacteria; Gene; Biochemistry; Immunology; Genetics","score_opus":0.005725739813478611,"score_gpt":0.22645392153757699,"score_spread":0.22072818172409836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077396218","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99353236,0.001588327,0.00005515606,0.0032402012,0.001053593,0.000052256386,0.000008366962,0.00006035242,0.00040936316],"genre_scores_gemma":[0.9969754,0.0011559873,0.00011568741,0.000066123735,0.000105885505,0.0000016058549,0.000006788084,0.000012327897,0.0015601977],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991251,0.000054922137,0.00043970955,0.0001199476,0.000009548861,0.00025073864],"domain_scores_gemma":[0.99946177,0.000029024222,0.00023001601,0.0002014616,0.000056928115,0.000020783948],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001618001,0.00013128053,0.00033994406,0.00025594892,0.00011394277,0.00001269557,0.0002311711,0.00045721952,0.007597417],"category_scores_gemma":[0.000035162957,0.00010115896,0.00011045492,0.00022153616,0.00005793485,0.00011079705,0.000029440382,0.00042676355,0.00033632893],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025269986,0.0000816891,0.00069903553,0.0000033623523,0.00016785761,0.000007762803,0.000042698317,0.0000039594147,0.9486624,0.00041994784,0.0073394077,0.0423192],"study_design_scores_gemma":[0.0015630249,0.0007043502,0.0050775707,0.000024706713,0.000059934806,0.0030258938,0.000059054375,8.347582e-7,0.48302543,0.00033826934,0.5059919,0.00012906016],"about_ca_topic_score_codex":0.0000706653,"about_ca_topic_score_gemma":0.00005710358,"teacher_disagreement_score":0.49865246,"about_ca_system_score_codex":0.00002828145,"about_ca_system_score_gemma":0.000039189494,"threshold_uncertainty_score":0.9933098},"labels":[],"label_agreement":null},{"id":"W2079180228","doi":"10.2460/javma.2001.218.367","title":"Effect of vaccination on experimental infection with Bordetella bronchiseptica in dogs","year":2001,"lang":"en","type":"article","venue":"Journal of the American Veterinary Medical Association","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Bordetella bronchiseptica; Nasal administration; Medicine; Vaccination; Immunology; Antibody; Respiratory tract; Respiratory system; Internal medicine; Biology","score_opus":0.008291269797522814,"score_gpt":0.29440620231708586,"score_spread":0.28611493251956305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079180228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998333,0.000058316957,0.000016465228,0.000531292,0.00070618757,0.00010189607,0.0000010862361,0.0000069125904,0.00024483853],"genre_scores_gemma":[0.999625,0.000104287676,0.000008238664,0.000056895195,0.000099179044,0.0000046264495,0.0000013077785,0.000007352502,0.00009307268],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99855083,0.0007708795,0.00035583886,0.000079344696,0.000110662506,0.00013242349],"domain_scores_gemma":[0.9986158,0.0003389354,0.00086318585,0.00008832649,0.000073599644,0.000020160403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095874124,0.000096914446,0.00030591316,0.00012529547,0.00005791477,0.0000063433517,0.000108763255,0.0000963566,0.0003004347],"category_scores_gemma":[0.00037210167,0.000056575474,0.00010307285,0.0002924608,0.000044790966,0.00009135873,0.000030199397,0.00033169644,0.000009666723],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0058063567,0.0007784565,0.4353113,0.000018820398,0.00024139178,0.000012611384,0.00021047897,0.00005283288,0.50014657,0.000021908127,0.00084313244,0.05655616],"study_design_scores_gemma":[0.0035497576,0.024223808,0.9019353,0.00017488938,0.00006214529,0.0007062581,0.000043983735,0.000017127633,0.060878966,0.000007463414,0.008282736,0.000117582545],"about_ca_topic_score_codex":0.00019782635,"about_ca_topic_score_gemma":0.0000212278,"teacher_disagreement_score":0.466624,"about_ca_system_score_codex":0.00026328603,"about_ca_system_score_gemma":0.000041724066,"threshold_uncertainty_score":0.32895494},"labels":[],"label_agreement":null},{"id":"W2079312670","doi":"10.1139/w05-151","title":"Expression of a pertussis toxin S1 fragment by inducible promoters in oral<i>Streptococcus</i>and the induction of immune responses during oral colonization in mice","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Canadian Bioethics Society","funders":"Canadian Institutes of Health Research; IWK Health Centre","keywords":"Colonization; Pertussis toxin; Microbiology; Immune system; Biology; Toxin; Bordetella pertussis; Streptococcus mutans; Promoter; Immunology; Gene expression; Bacteria; Gene; Genetics; Receptor; G protein","score_opus":0.007752164532416783,"score_gpt":0.21097541304492884,"score_spread":0.20322324851251206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079312670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99669385,0.002139654,0.000006063301,0.00051489094,0.00035651488,0.00022271137,0.00005301969,0.0000017919856,0.000011532671],"genre_scores_gemma":[0.99968714,0.000076007826,0.00003485139,0.000015522308,0.000015132943,0.0000068156164,0.000042381576,0.0000073349697,0.000114789735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844843,0.0005245494,0.0006858628,0.0001250079,0.000007755443,0.00020840426],"domain_scores_gemma":[0.99925363,0.00008580662,0.00044099003,0.00009869052,0.00009934541,0.000021543152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005121409,0.00011032011,0.0003837622,0.00045732252,0.00007448976,0.0000071484,0.000120381934,0.0002445485,0.000114097595],"category_scores_gemma":[0.00010907354,0.000080025355,0.000056040684,0.00023247773,0.0002762686,0.0000878656,0.000021835243,0.00025528946,0.0000014256858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005690912,0.000056509696,0.030885048,0.000015817344,0.000024283316,0.000002209097,0.0005128336,0.000023210927,0.96716845,0.000028164386,0.0005314315,0.00018292716],"study_design_scores_gemma":[0.00379644,0.00020753035,0.063112944,0.00016683897,0.000019335666,0.0002452947,0.00033130948,4.3409224e-7,0.92913103,0.00003585448,0.0028688887,0.000084087915],"about_ca_topic_score_codex":0.021881387,"about_ca_topic_score_gemma":0.026077334,"teacher_disagreement_score":0.038037434,"about_ca_system_score_codex":0.000098022414,"about_ca_system_score_gemma":0.00023873521,"threshold_uncertainty_score":0.9916942},"labels":[],"label_agreement":null},{"id":"W2079429016","doi":"10.1097/01.inf.0000160918.72953.51","title":"Pertussis Immunization of Adolescents in the United States","year":2005,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Association of Radiation Oncology","funders":"","keywords":"Medicine; Herd immunity; Vaccination; Pertussis vaccine; Bordetella pertussis; Pediatrics; Immunization; Whooping cough; Population; Incidence (geometry); Booster dose; Cohort; Disease burden; Environmental health; Immunology; Internal medicine","score_opus":0.007410685731540023,"score_gpt":0.23096629694949794,"score_spread":0.22355561121795792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079429016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972683,0.0010754062,0.00009303625,0.0008299265,0.0004976434,0.00013412797,0.000012503112,0.000018338647,0.00007071371],"genre_scores_gemma":[0.9972366,0.0020564958,0.0000022095282,0.00020525827,0.00040653147,0.0000069944604,0.000028080382,0.000008488371,0.00004932638],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989255,0.00047258672,0.0003125704,0.000071038005,0.000029425526,0.00018886964],"domain_scores_gemma":[0.99935687,0.00012762881,0.00020000357,0.0001743486,0.00011982881,0.00002134255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042921575,0.00010372311,0.00011665999,0.00026746574,0.00036301895,0.000034768702,0.00020130211,0.000058913636,0.00026890106],"category_scores_gemma":[0.00012686859,0.00005502065,0.000090392,0.00055679283,0.000048327147,0.00010364362,0.000032391297,0.00035429874,0.000053786553],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001894385,0.00071049324,0.9890098,0.00002244866,0.00006003921,0.0000014233353,0.001324657,0.0020922513,0.001316433,0.00012903995,0.0035840871,0.0015598685],"study_design_scores_gemma":[0.0019011523,0.00012675958,0.98841274,0.000025943675,0.00030428977,0.0003472357,0.00042969154,0.000110550696,0.000115284696,0.00049475254,0.0075779976,0.00015359632],"about_ca_topic_score_codex":0.00021496502,"about_ca_topic_score_gemma":0.000040332314,"teacher_disagreement_score":0.0039939103,"about_ca_system_score_codex":0.000038398648,"about_ca_system_score_gemma":0.00006413642,"threshold_uncertainty_score":0.2944278},"labels":[],"label_agreement":null},{"id":"W2079716843","doi":"10.1097/01.inf.0000437806.76221.20","title":"Safety and Immunogenicity of a Toddler Dose Following an Infant Series of a Hexavalent Diphtheria, Tetanus, Acellular Pertussis, Inactivated Poliovirus, Haemophilus influenzae Type b, Hepatitis B Vaccine Administered Concurrently or at Separate Visits With a Heptavalent Pneumococcal Conjugate Vaccine","year":2013,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Surrey Memorial Hospital; Sanofi (Canada); Coquitlam College; Université de Montréal; Montreal Children's Hospital; University of Manitoba; Centre Hospitalier Universitaire Sainte-Justine; Dalhousie University","funders":"Sanofi Pasteur; European Commission","keywords":"Medicine; Diphtheria; Tetanus; Poliovirus; Toxoid; Filamentous haemagglutinin adhesin; Inactivated Poliovirus Vaccine; Virology; Immunogenicity; Hib vaccine; Vaccination; Booster dose; Pertactin; Immunology; Antigen; Immunization; Conjugate vaccine; Internal medicine; Virus; Pertussis toxin","score_opus":0.01171486683663383,"score_gpt":0.24536602331042878,"score_spread":0.23365115647379495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079716843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99327993,0.0045750425,0.000014567693,0.00018975323,0.00080973445,0.00088949595,0.00016561017,0.000056817196,0.00001905336],"genre_scores_gemma":[0.99455094,0.0048081186,0.000010686282,0.00004789408,0.00020272666,0.000036237918,0.000047942296,0.000046357254,0.0002490712],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99735856,0.000642168,0.0010483259,0.00034963997,0.000099702855,0.0005016312],"domain_scores_gemma":[0.99773806,0.00018046769,0.00092217646,0.00046385845,0.0004820138,0.00021340772],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038796864,0.0004618437,0.0008459435,0.00026185246,0.000674705,0.00008210453,0.0002411378,0.00018325656,0.0010702747],"category_scores_gemma":[0.00016585244,0.0002762595,0.00023393701,0.00051120645,0.000094151845,0.00056710804,0.0002320619,0.0004390423,0.000028814502],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01387451,0.0006912367,0.7485203,0.00013812547,0.0012887188,0.000027881979,0.0006880373,0.00006822233,0.23405342,0.000017176555,0.0001381381,0.00049422705],"study_design_scores_gemma":[0.008905252,0.0038782891,0.9746999,0.00011463006,0.0015690814,0.0022214812,0.0001311635,0.00003551064,0.006725865,0.000054539145,0.0011587687,0.0005055027],"about_ca_topic_score_codex":0.0016054688,"about_ca_topic_score_gemma":0.00036574592,"teacher_disagreement_score":0.22732756,"about_ca_system_score_codex":0.00013869535,"about_ca_system_score_gemma":0.00037154084,"threshold_uncertainty_score":0.99996895},"labels":[],"label_agreement":null},{"id":"W2079773030","doi":"10.1128/jb.183.19.5472-5481.2001","title":"Multiple Origins and Replication Proteins Influence Biological Properties of β-Lactamase-Producing Plasmids from <i>Neisseria gonorrhoeae</i>","year":2001,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"School of Medicine, New York University; University of Ottawa","keywords":"Plasmid; Biology; Neisseria gonorrhoeae; Genetics; Origin of replication; DNA replication; Gene; Autonomously replicating sequence; Molecular biology","score_opus":0.026237334164892295,"score_gpt":0.2410757190735685,"score_spread":0.2148383849086762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079773030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978378,0.0008751793,0.00004283802,0.00037734376,0.00062930933,0.00018105752,0.000020533818,0.00002076998,0.00001520701],"genre_scores_gemma":[0.99874926,0.0006566157,0.00032426225,0.00004898847,0.0001471906,0.000011338853,0.000016410895,0.00000985259,0.000036076064],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99869514,0.0002256977,0.00061068067,0.0002605147,0.000008474607,0.00019947247],"domain_scores_gemma":[0.99868757,0.00013340787,0.0006177103,0.00028980986,0.00024016741,0.000031358264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003311574,0.00015882571,0.00048080954,0.00012962535,0.000104407285,0.00001548494,0.00017051348,0.00027257664,0.00012059652],"category_scores_gemma":[0.00063756,0.00010912633,0.00007781125,0.000118271215,0.0002231261,0.00021895824,0.00006937633,0.00027786393,0.000014785457],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000735609,0.00009205697,0.16735075,0.000009403157,0.000095167605,7.418355e-7,0.0001460985,0.000006039188,0.8297062,0.000036004963,0.000038527378,0.0017834324],"study_design_scores_gemma":[0.0013279156,0.00095949677,0.54628867,0.00010887702,0.000045623397,0.0008910304,0.00009968721,0.000004754628,0.41775292,0.0001036122,0.032255877,0.00016153153],"about_ca_topic_score_codex":0.00045173714,"about_ca_topic_score_gemma":0.00004675515,"teacher_disagreement_score":0.41195324,"about_ca_system_score_codex":0.000036469213,"about_ca_system_score_gemma":0.0000667967,"threshold_uncertainty_score":0.44500428},"labels":[],"label_agreement":null},{"id":"W2079864355","doi":"10.1136/bmj.g2415","title":"Introducing a new group B meningococcus vaccine","year":2014,"lang":"en","type":"editorial","venue":"BMJ","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Herd immunity; Vaccination; Reverse vaccinology; Government (linguistics); Medicine; Meningococcal vaccine; Meningococcal disease; Influenza vaccine; Immunization; Business; Family medicine; Virology; Immunology; Neisseria meningitidis; Biology","score_opus":0.008347910813664457,"score_gpt":0.26830423890404653,"score_spread":0.25995632809038205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079864355","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00093615777,0.0009176307,0.00041454998,0.00069286174,0.99520516,0.000352386,0.00005006055,0.00019261122,0.0012385553],"genre_scores_gemma":[0.0004907161,0.000089151225,0.00022497827,0.000035542143,0.9688353,0.000055937628,0.0015940807,0.000058660287,0.028615626],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99833775,0.00018561016,0.0005153459,0.0005334914,0.000029029268,0.00039878447],"domain_scores_gemma":[0.9984761,0.00040441437,0.00033575797,0.0006207195,0.00012649143,0.00003650431],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000494717,0.0003547899,0.00065302383,0.0001668359,0.00018456268,0.000053990258,0.00028925575,0.0014641718,0.0023523425],"category_scores_gemma":[0.0009924633,0.00030450654,0.00016736258,0.00012309765,0.000018677993,0.00006629483,0.00016435176,0.00090005645,0.0018749608],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014043211,0.000033268465,0.000019724346,0.00002926022,0.00022688188,8.1507955e-7,0.0000397502,0.0000012468938,0.03638748,0.00008011837,0.956576,0.006465061],"study_design_scores_gemma":[0.0016167361,0.00024620898,0.00007723467,0.00009319623,0.00012795442,0.000020033305,0.000005640919,4.919441e-7,0.0009936957,0.000072601775,0.9963974,0.00034882457],"about_ca_topic_score_codex":0.0014475604,"about_ca_topic_score_gemma":0.0002936311,"teacher_disagreement_score":0.03982142,"about_ca_system_score_codex":0.00005781499,"about_ca_system_score_gemma":0.00017278871,"threshold_uncertainty_score":0.9999407},"labels":[],"label_agreement":null},{"id":"W2080006730","doi":"10.1038/ncpneuro0713","title":"Drug Insight: steroids in CNS infectious diseases—new indications for an old therapy","year":2008,"lang":"en","type":"review","venue":"Nature Clinical Practice Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Encephalitis; Meningitis; Tuberculous meningitis; Intensive care medicine; Adjunctive treatment; Randomized controlled trial; Pharmacotherapy; Dexamethasone; Herpes simplex virus; Antibiotics; Immunology; Internal medicine; Virus; Pediatrics; Biology","score_opus":0.06395828543167852,"score_gpt":0.42984874219454916,"score_spread":0.36589045676287063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080006730","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014997554,0.98423207,0.000019281895,0.0016715708,0.009751053,0.002055627,0.00016895615,0.00018265178,0.0004190508],"genre_scores_gemma":[0.0007908688,0.99044055,0.000048081274,0.005023912,0.0014636347,0.00035495308,0.0011430952,0.0001048326,0.0006300503],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99267995,0.0037411256,0.0017619947,0.0012165521,0.000037661463,0.00056273374],"domain_scores_gemma":[0.98568285,0.011651456,0.0013488681,0.00097401877,0.00021052315,0.0001322916],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00063191797,0.00063063885,0.0022854395,0.0005243669,0.00030168303,0.00004330776,0.00061935536,0.0046967994,0.00017974245],"category_scores_gemma":[0.006474683,0.000506932,0.00081209565,0.00056284433,0.0002594598,0.00047108033,0.00014478585,0.0065535884,0.0002678703],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00084897265,0.003201904,0.0008136285,0.00026831316,0.00068373466,0.000021648384,0.00008949247,5.558727e-7,0.000010197815,0.0012656146,0.046954893,0.9458411],"study_design_scores_gemma":[0.0027189627,0.0019950508,0.0013073548,0.00011366784,0.000545227,0.0009126006,0.0000033737635,2.830075e-7,6.745096e-7,0.00024698224,0.99174315,0.0004126555],"about_ca_topic_score_codex":0.0001435454,"about_ca_topic_score_gemma":0.00031737835,"teacher_disagreement_score":0.9454284,"about_ca_system_score_codex":0.00004166592,"about_ca_system_score_gemma":0.0008324322,"threshold_uncertainty_score":0.9997382},"labels":[],"label_agreement":null},{"id":"W2080375667","doi":"10.1016/j.vaccine.2007.04.061","title":"Hypotonic-hyporesponsive episode (HHE) as an adverse event following immunization in early childhood: Case definition and guidelines for data collection, analysis, and presentation","year":2007,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Immunization; Medicine; Presentation (obstetrics); Pediatrics; Adverse effect; Event (particle physics); Immunology; Internal medicine; Obstetrics","score_opus":0.03637471885575868,"score_gpt":0.33239897386523504,"score_spread":0.2960242550094764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080375667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99177164,0.00090890547,0.0062125255,0.00018853798,0.00029246084,0.0005314581,0.000048888192,0.000036459383,0.00000911011],"genre_scores_gemma":[0.9956874,0.0002970263,0.0019696243,0.000061663995,0.00004882761,0.000020361027,0.0018001524,0.000014302838,0.0001006068],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99883765,0.0001257638,0.00047517972,0.00035138274,0.000016655591,0.00019336662],"domain_scores_gemma":[0.99907845,0.00021874043,0.00014927922,0.0003058299,0.00021792346,0.00002976243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007706199,0.000141589,0.00024779458,0.00051514804,0.00030639177,0.000025954867,0.0000708239,0.00015402328,0.000040322066],"category_scores_gemma":[0.0005980627,0.00013542039,0.000047242705,0.0006022722,0.00000934944,0.00044837216,0.00007890905,0.0000912997,0.0000035042206],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031992341,0.00087388244,0.766751,0.000046596273,0.002363396,0.00008733136,0.0038509772,0.0001496489,0.17515124,0.0008275724,0.0016170085,0.04508214],"study_design_scores_gemma":[0.0047919718,0.0004625317,0.9833691,0.000031397023,0.00074985955,0.00065413077,0.001314184,0.00065064046,0.0060732104,0.00042931124,0.0012256219,0.00024800486],"about_ca_topic_score_codex":0.006598357,"about_ca_topic_score_gemma":0.014668148,"teacher_disagreement_score":0.21661817,"about_ca_system_score_codex":0.000027617973,"about_ca_system_score_gemma":0.000035089903,"threshold_uncertainty_score":0.99747866},"labels":[],"label_agreement":null},{"id":"W2080885706","doi":"10.1371/journal.pone.0042664","title":"Intranasal Immunization with Nontypeable Haemophilus influenzae Outer Membrane Vesicles Induces Cross-Protective Immunity in Mice","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Alberta Heritage Foundation for Medical Research; Alberta Glycomics Centre; Fondation pour la Recherche Médicale; Canadian Institutes of Health Research; Austrian Science Fund","keywords":"Haemophilus influenzae; Bacterial outer membrane; Microbiology; Immune system; Immunization; Immunology; Immunity; Immunogenicity; Vaccination; Biology; Virology; Antibiotics","score_opus":0.03388798422836248,"score_gpt":0.2457512652844468,"score_spread":0.21186328105608432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080885706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99806523,0.0006667313,0.000028130129,0.00012012158,0.00019792025,0.00036332043,0.000017549386,0.000076982076,0.00046401276],"genre_scores_gemma":[0.9992224,0.000051042454,0.00017697345,0.00005352979,0.00011294238,0.000060926493,0.00007160236,0.000023720868,0.00022686861],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989892,0.00020066422,0.0002547871,0.00016590882,0.000025399891,0.00036404261],"domain_scores_gemma":[0.9993994,0.00007090607,0.00010772531,0.00023856321,0.00015920623,0.000024203067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025584482,0.00017407672,0.00029426036,0.00014915664,0.00022939977,0.00003751656,0.00014638045,0.00023963235,0.0004059028],"category_scores_gemma":[0.00007178378,0.00014643869,0.000027783683,0.00028388537,0.00011806778,0.0005808741,0.000071186216,0.00041146297,0.00017667124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004371551,0.0010808405,0.04159956,0.00003768842,0.00029765867,5.262843e-7,0.0010031855,0.0000097703805,0.95505404,0.000106850646,0.0000072024964,0.00036554114],"study_design_scores_gemma":[0.0014006991,0.0001875262,0.20618233,0.00010105005,0.00006220135,0.000013089302,0.0001272589,0.0000023753457,0.7914853,0.000040195653,0.00020529024,0.00019266213],"about_ca_topic_score_codex":0.0019787336,"about_ca_topic_score_gemma":0.0002982601,"teacher_disagreement_score":0.16458276,"about_ca_system_score_codex":0.000056338635,"about_ca_system_score_gemma":0.000035089135,"threshold_uncertainty_score":0.5971596},"labels":[],"label_agreement":null},{"id":"W2081163012","doi":"10.1016/j.carres.2013.05.002","title":"Comparison of lipopolysaccharide structures of Bordetella pertussis clinical isolates from pre- and post-vaccine era","year":2013,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"Centre National de la Recherche Scientifique","keywords":"Bordetella pertussis; Lipopolysaccharide; Bacterial outer membrane; Antigen; Pertactin; Epitope; Microbiology; Monoclonal antibody; Chemistry; Bordetella; Whooping cough; Bacteria; Antibody; Virology; Vaccination; Biology; Escherichia coli; Pertussis toxin; Immunology; Gene; Biochemistry; G protein","score_opus":0.05184622976693848,"score_gpt":0.3955602890901849,"score_spread":0.34371405932324645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081163012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946613,0.004074153,0.0000042776755,0.00033422245,0.00043034542,0.00031568258,0.000065900414,0.000019904277,0.000094263305],"genre_scores_gemma":[0.9990081,0.00052081514,0.00006836558,0.000010734738,0.000088230365,0.000018804136,0.000056022564,0.000016174337,0.00021274659],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981364,0.00052772986,0.0006634676,0.00030779635,0.00003811557,0.00032651093],"domain_scores_gemma":[0.99791366,0.0008667466,0.00015652321,0.0003750829,0.00063574367,0.00005226469],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000425238,0.0001437183,0.0005717916,0.00022183353,0.00013746631,0.000030557167,0.00022022713,0.00033251956,0.0014735823],"category_scores_gemma":[0.00037488,0.00010841861,0.000093352864,0.00018809205,0.00028801552,0.00010520347,0.00022142626,0.0005674426,0.00004469798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019642178,0.00012951245,0.10421842,0.00002522451,0.00019154912,1.2596801e-7,0.00033675588,0.0000011222511,0.8854336,0.00022489227,0.00072043034,0.008521899],"study_design_scores_gemma":[0.0007961813,0.0007199781,0.377039,0.000037144055,0.000037764683,0.0000027135557,0.00046676915,0.00008644362,0.6194065,0.00066985603,0.00061728177,0.00012038321],"about_ca_topic_score_codex":0.012893982,"about_ca_topic_score_gemma":0.0001689657,"teacher_disagreement_score":0.27282056,"about_ca_system_score_codex":0.000011096019,"about_ca_system_score_gemma":0.00007411151,"threshold_uncertainty_score":0.9994392},"labels":[],"label_agreement":null},{"id":"W2082211297","doi":"10.1097/01.inf.0000247103.01075.cc","title":"IS PERTUSSIS IMMUNE GLOBULIN EFFICACIOUS FOR THE TREATMENT OF HOSPITALIZED INFANTS WITH PERTUSSIS?","year":2006,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; University of Alberta; Dalhousie University","funders":"U.S. Food and Drug Administration","keywords":"Medicine; Bordetella pertussis; Placebo; Whooping cough; Apnea; Anesthesia; Randomized controlled trial; Clinical trial; Internal medicine; Pediatrics; Immunology; Vaccination","score_opus":0.00697124149987018,"score_gpt":0.23055726758526907,"score_spread":0.22358602608539888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082211297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9855919,0.010836373,0.0003216498,0.0012132289,0.0011303063,0.0006393458,0.00012442468,0.000048267684,0.000094495044],"genre_scores_gemma":[0.99428445,0.003992651,0.00001350267,0.000050067676,0.00096582714,0.000074182804,0.000018037239,0.000026736265,0.00057452515],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988028,0.00014807869,0.0004586889,0.00018119508,0.000045263987,0.0003639667],"domain_scores_gemma":[0.99853253,0.00044194295,0.00040281654,0.00035798384,0.0002192809,0.00004544014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019812131,0.00026060105,0.0003402092,0.00012250557,0.001086905,0.00006681522,0.00019133804,0.000105165884,0.00045406917],"category_scores_gemma":[0.00005553154,0.00011493918,0.00042086557,0.00026545988,0.00012773024,0.00007933884,0.000021677828,0.0001612484,0.000033860404],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038640446,0.0035564385,0.97084916,0.000049106788,0.0017192396,0.000007268596,0.00091782137,0.0006238628,0.003005451,0.00020569094,0.009212347,0.005989564],"study_design_scores_gemma":[0.011533924,0.0028715807,0.95328707,0.0000199676,0.003847282,0.00057897856,0.00014524328,0.00006012,0.00087207195,0.00076433946,0.02559049,0.00042893493],"about_ca_topic_score_codex":0.00046306005,"about_ca_topic_score_gemma":0.00003414567,"teacher_disagreement_score":0.017562099,"about_ca_system_score_codex":0.00008503501,"about_ca_system_score_gemma":0.00017263927,"threshold_uncertainty_score":0.83597046},"labels":[],"label_agreement":null},{"id":"W2082403900","doi":"10.3201/eid2006.131069","title":"Oral Fluid Testing for Pertussis, England and Wales, June 2007–August 2009","year":2014,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario","funders":"Public Health England","keywords":"Medicine; Epidemiology; Pediatrics; Whooping cough; Vaccination; Internal medicine; Immunology","score_opus":0.011762799788102282,"score_gpt":0.24410327041243005,"score_spread":0.23234047062432778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082403900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923469,0.0027893146,0.00062317087,0.00015350568,0.002597834,0.00026253145,0.00010135804,0.0003488325,0.0007765457],"genre_scores_gemma":[0.99788016,0.000080455386,0.00006987328,0.00012346853,0.00045411306,0.000076118165,0.00014078026,0.000029318458,0.0011457332],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999002,0.00010821405,0.00022669589,0.0003028071,0.00001381154,0.00034647324],"domain_scores_gemma":[0.9992197,0.0003475064,0.00008613326,0.00017892318,0.000113976916,0.00005372311],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015141134,0.00020489824,0.00027090067,0.00011711556,0.0005628452,0.00005553677,0.000065669185,0.000120321514,0.00043067007],"category_scores_gemma":[0.0006909349,0.00017842044,0.00008107997,0.00013068493,0.00007769483,0.00013267668,0.0000515975,0.00010165142,0.000053829775],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023759295,0.0006280245,0.6064103,0.0002184008,0.00043494176,0.0000013232471,0.00023540707,0.00006771675,0.18457115,0.0013372662,0.104375914,0.10148195],"study_design_scores_gemma":[0.0036841077,0.0005492082,0.1307149,0.00006633504,0.0002693462,0.000113526134,0.000037069007,0.00014254151,0.001439622,0.00056148606,0.8619588,0.00046305385],"about_ca_topic_score_codex":0.0003141627,"about_ca_topic_score_gemma":0.00009636111,"teacher_disagreement_score":0.7575829,"about_ca_system_score_codex":0.000018699911,"about_ca_system_score_gemma":0.000028627564,"threshold_uncertainty_score":0.7275774},"labels":[],"label_agreement":null},{"id":"W2082441048","doi":"10.1542/peds.112.6.e453","title":"Injection-Site Reactions to Booster Doses of Acellular Pertussis Vaccine: Rate, Severity, and Anticipated Impact","year":2003,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Medicine; Diphtheria; Booster dose; Injection site; Adverse effect; Poliomyelitis; Immunization; Tetanus; Pediatrics; Pertussis vaccine; Vaccination; Internal medicine; Immunology; Antigen","score_opus":0.013001047843962485,"score_gpt":0.26391616484460023,"score_spread":0.25091511700063773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082441048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997636,0.00076513406,0.00013443983,0.00008817263,0.00083711173,0.00016473742,0.00006180671,0.0000468514,0.0002657517],"genre_scores_gemma":[0.9982665,0.00043950236,0.00006582984,0.000036209687,0.00006534371,0.000009835165,0.000037803406,0.000014278456,0.001064709],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99914646,0.00014865164,0.0002724905,0.00019980728,0.000012761657,0.00021983722],"domain_scores_gemma":[0.9993968,0.00013390121,0.000101455604,0.00018801406,0.00013839312,0.00004143001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020913676,0.00014652922,0.00023364546,0.00024915874,0.0001663835,0.00002214772,0.000048075417,0.0001772656,0.00060934207],"category_scores_gemma":[0.00025466643,0.00012147561,0.000072046874,0.0004899518,0.00001802805,0.00012157505,0.000043396376,0.00014417614,0.00009731794],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011708776,0.00018587131,0.40385452,0.00004285492,0.00009316146,8.97126e-7,0.00039558008,0.000031031243,0.58783764,0.00007135236,0.006926404,0.00044357637],"study_design_scores_gemma":[0.0021379367,0.0008976827,0.78838444,0.000020066222,0.00039894984,0.00033633868,0.00022880692,0.000008066328,0.09408627,0.00010913869,0.11282523,0.0005670772],"about_ca_topic_score_codex":0.00065938337,"about_ca_topic_score_gemma":0.00005470266,"teacher_disagreement_score":0.49375138,"about_ca_system_score_codex":0.000024214985,"about_ca_system_score_gemma":0.000046581343,"threshold_uncertainty_score":0.6671868},"labels":[],"label_agreement":null},{"id":"W2082719198","doi":"10.1007/s11940-008-0022-0","title":"Neurocritical care of patients with central nervous system infections","year":2008,"lang":"en","type":"article","venue":"Current Treatment Options in Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre","funders":"","keywords":"Medicine; Neurointensive care; Intensive care medicine; Meningitis; Hydrocephalus; Intracranial pressure; Stroke (engine); Streptococcus pneumoniae; Encephalopathy; Neurology; Encephalitis; Viral encephalitis; Decompressive craniectomy; Intracranial pressure monitoring; Traumatic brain injury; Pediatrics; Antibiotics; Internal medicine; Surgery; Immunology","score_opus":0.01588810568623308,"score_gpt":0.24259701536915182,"score_spread":0.22670890968291874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082719198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99645305,0.0006119994,0.00003586707,0.00004992284,0.0021096326,0.0003811371,0.000115761075,0.00007904149,0.00016360164],"genre_scores_gemma":[0.9993307,0.00021442118,0.000012025366,0.000005920884,0.000036117533,0.00011096113,0.00025793837,0.000013638304,0.000018259652],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99890834,0.00018740124,0.00028548675,0.00027980053,0.000016083479,0.0003229163],"domain_scores_gemma":[0.999487,0.00007418861,0.00006625209,0.00023500703,0.00011007507,0.000027486227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000012765458,0.00018194864,0.00028778007,0.00021672665,0.0001971316,0.0000036164363,0.00007033345,0.00012029528,0.00007291306],"category_scores_gemma":[0.000013315277,0.00014144483,0.00007950222,0.00021612784,0.00018561064,0.00006606447,0.000029887027,0.00018134221,0.00004018033],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026254918,0.002468858,0.9908202,0.00003542656,0.00006331996,0.0000074013687,0.00028429824,0.00024923545,0.00065124815,0.002421198,0.00008144547,0.0026547946],"study_design_scores_gemma":[0.0029095812,0.0024341997,0.9820792,0.000016170501,0.00007145799,0.00014710591,0.00003528017,0.0000048529587,0.0002881765,0.0000033316824,0.011890419,0.00012020798],"about_ca_topic_score_codex":0.00012106339,"about_ca_topic_score_gemma":0.000116666175,"teacher_disagreement_score":0.011808974,"about_ca_system_score_codex":0.00007335957,"about_ca_system_score_gemma":0.000058417463,"threshold_uncertainty_score":0.57679534},"labels":[],"label_agreement":null},{"id":"W2082798915","doi":"10.1016/s0264-410x(02)00162-7","title":"The effectiveness of serogroup C meningococcal vaccine estimated from routine surveillance data","year":2002,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Sante Montreal; Université de Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal","funders":"","keywords":"Medicine; Meningococcal disease; Meningococcal vaccine; Cohort; Vaccination; Neisseria meningitidis; Population; Virology; Vaccine efficacy; Pediatrics; Immunology; Immunization; Internal medicine; Environmental health; Biology; Antibody","score_opus":0.030471787728074764,"score_gpt":0.26931140468079356,"score_spread":0.2388396169527188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082798915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99230105,0.005227763,0.00014576831,0.00033336747,0.0011489475,0.00028511064,0.00027877185,0.00011799906,0.00016120804],"genre_scores_gemma":[0.9982907,0.00041854288,0.00006416858,0.000011102916,0.00010290576,0.000011731724,0.0008303003,0.000022360275,0.00024815093],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983416,0.00053863804,0.00040952576,0.00038010802,0.00002058966,0.00030953338],"domain_scores_gemma":[0.99733293,0.0012840099,0.00017377351,0.0010695041,0.000117144446,0.000022655156],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007989023,0.00020967289,0.0004251588,0.000051896208,0.00026732875,0.000025548557,0.00056568906,0.00016244611,0.0012813577],"category_scores_gemma":[0.00033250597,0.0001367961,0.000056578778,0.00029175542,0.00001823002,0.000135648,0.00032483772,0.00020721917,0.00022254308],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011739446,0.00027939148,0.257509,0.000028467417,0.000499061,0.0000014864261,0.000038510396,0.000015313732,0.7241519,0.0003149856,0.008148513,0.007839422],"study_design_scores_gemma":[0.0053045666,0.00028972485,0.88557076,0.00008505298,0.00008068598,0.000042808155,0.00002069789,0.00051196385,0.06813157,0.00011790836,0.039579548,0.0002647221],"about_ca_topic_score_codex":0.0010828287,"about_ca_topic_score_gemma":0.00030832694,"teacher_disagreement_score":0.65602034,"about_ca_system_score_codex":0.000018060779,"about_ca_system_score_gemma":0.000009228637,"threshold_uncertainty_score":0.9996316},"labels":[],"label_agreement":null},{"id":"W2083505791","doi":"10.1046/j.1365-2044.2000.01479-3.x","title":"Chemoprophylaxis for meninggococcal disease in healthcare workers","year":2000,"lang":"en","type":"letter","venue":"Anaesthesia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University","keywords":"Medicine; Meningococcal disease; Chemoprophylaxis; Pediatrics; Population; Referral; Intensive care medicine; Disease; Carriage; Neisseria meningitidis; Internal medicine; Family medicine","score_opus":0.01537102526204441,"score_gpt":0.2521481614313323,"score_spread":0.23677713616928786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083505791","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21449755,0.0052763876,0.000009174968,0.7769051,0.0013555818,0.0013652197,0.00021498941,0.0001660962,0.00020984856],"genre_scores_gemma":[0.35404336,0.0012071683,0.0002713125,0.6018306,0.0040640095,0.0018080638,0.0090825185,0.0003392527,0.027353713],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985552,0.0001279553,0.00032582844,0.00045256165,0.00001476511,0.0005236956],"domain_scores_gemma":[0.9994298,0.00005389405,0.000099562305,0.00036264738,0.000026680878,0.000027394075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008481828,0.00030555687,0.00044409218,0.00021061568,0.00013528854,0.000025031015,0.00020628914,0.0009804374,0.00044184935],"category_scores_gemma":[0.000014932895,0.00027977876,0.00021065043,0.00015151536,0.00006825072,0.00005123244,0.000019857825,0.00088252226,0.00015736755],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004007949,0.00006681437,0.012122576,0.00016391574,0.00008180449,0.000051377585,0.00003407585,0.000002675732,0.0003906573,0.000082357416,0.9597428,0.02686015],"study_design_scores_gemma":[0.00060568773,0.00020064395,0.006814743,0.00009554804,0.00003580097,0.000009802239,0.0000035198816,0.000001086737,0.0000899974,0.00022636309,0.9916119,0.00030493335],"about_ca_topic_score_codex":0.0018011847,"about_ca_topic_score_gemma":0.000078929406,"teacher_disagreement_score":0.17507455,"about_ca_system_score_codex":0.000074722986,"about_ca_system_score_gemma":0.00013383744,"threshold_uncertainty_score":0.9999654},"labels":[],"label_agreement":null},{"id":"W2083520729","doi":"10.1128/iai.01260-12","title":"Enzymatic Modification of Lipid A by ArnT Protects Bordetella bronchiseptica against Cationic Peptides and Is Required for Transmission","year":2013,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Bordetella bronchiseptica; Biology; Lipid A; Aryl hydrocarbon receptor nuclear translocator; Microbiology; Innate immune system; Bordetella; Lipopolysaccharide; Bacteria; Immune system; Bordetella pertussis; Immunology; Biochemistry; Genetics; Gene","score_opus":0.01789992838789098,"score_gpt":0.25562368973820543,"score_spread":0.23772376135031445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083520729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574614,0.00054819335,0.0021367595,0.0002650485,0.00014401817,0.00080381485,0.000015390704,0.000043171556,0.00029745774],"genre_scores_gemma":[0.99822336,0.0008462312,0.000109890956,0.0000391222,0.000016160358,0.00018932721,0.00007876488,0.000009697706,0.0004874572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993351,0.00011752389,0.00026632237,0.00014382882,0.000011018685,0.00012621793],"domain_scores_gemma":[0.9994707,0.000082291335,0.00013486929,0.00015273926,0.00013630405,0.000023089422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015424067,0.00011583271,0.00017866939,0.000080851874,0.00032455716,0.000031375646,0.000035787456,0.00015833978,0.00018262865],"category_scores_gemma":[0.0000630754,0.00010059711,0.000045274333,0.00008645181,0.00009707258,0.00019329012,0.000017671973,0.00011753516,0.000015763177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003911375,0.00012399169,0.00058135396,0.000111707464,0.00004101652,2.3698936e-9,0.00044855993,0.0000010581817,0.95233905,0.00008114311,0.0013544209,0.04487855],"study_design_scores_gemma":[0.0027699433,0.0010390279,0.07727551,0.00016228501,0.00007876424,0.00002492676,0.00020276189,0.00058895163,0.8481237,0.0010204505,0.06835156,0.00036209935],"about_ca_topic_score_codex":0.0010514408,"about_ca_topic_score_gemma":0.0000130295675,"teacher_disagreement_score":0.10421536,"about_ca_system_score_codex":0.000017389297,"about_ca_system_score_gemma":0.000021768932,"threshold_uncertainty_score":0.41022313},"labels":[],"label_agreement":null},{"id":"W2083558255","doi":"10.1097/01.inf.0000160708.43944.99","title":"Epidemiology of Pertussis","year":2005,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":291,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control","funders":"","keywords":"Medicine; Incidence (geometry); Whooping cough; Epidemiology; Notifiable disease; Pediatrics; Population; Vaccination; Transmission (telecommunications); Disease; Public health; Pertussis vaccine; Immunization; Environmental health; Immunology; Pathology","score_opus":0.044632762933170686,"score_gpt":0.3336751323230815,"score_spread":0.2890423693899108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083558255","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017170819,0.9936646,0.00003458185,0.000074633565,0.0037833403,0.00034619437,0.00011091631,0.000052370277,0.00021623827],"genre_scores_gemma":[0.0014485614,0.9943157,0.0000071907352,0.00004078776,0.003458943,0.000045508918,0.00004038794,0.000044820437,0.0005980868],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99613565,0.0017510548,0.0013431524,0.00025657375,0.000024734152,0.00048881135],"domain_scores_gemma":[0.9961337,0.0015975263,0.0015497515,0.00046568518,0.00015402488,0.00009934665],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011165178,0.0004356955,0.0017361259,0.00045913443,0.000541471,0.00001002856,0.0004287922,0.0004787953,0.002072575],"category_scores_gemma":[0.0010163598,0.0002375031,0.0014043687,0.00040981284,0.00014332707,0.000081665894,0.00012902034,0.0012743286,0.0006108007],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005723996,0.0004958644,0.030534232,0.0024688125,0.0013410756,0.000005337533,0.00004315167,0.000012547597,8.902287e-7,0.0004628425,0.015459376,0.9491186],"study_design_scores_gemma":[0.00035974695,0.0001037375,0.0014555408,0.0003319263,0.005776267,0.0018453788,0.000005605515,2.8768548e-7,8.0146215e-8,0.0002982955,0.98954546,0.00027764597],"about_ca_topic_score_codex":0.000031328007,"about_ca_topic_score_gemma":0.000005348519,"teacher_disagreement_score":0.9740861,"about_ca_system_score_codex":0.000114551825,"about_ca_system_score_gemma":0.000661355,"threshold_uncertainty_score":0.9988397},"labels":[],"label_agreement":null},{"id":"W2084134328","doi":"10.1007/s12028-011-9634-4","title":"Cerebral Infarction in Adults with Bacterial Meningitis","year":2011,"lang":"en","type":"article","venue":"Neurocritical Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":143,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Cerebral infarction; Meningitis; Internal medicine; Infarction; Odds ratio; Glasgow Outcome Scale; Stroke (engine); Prospective cohort study; Glasgow Coma Scale; Surgery; Cardiology; Myocardial infarction; Ischemia","score_opus":0.012317888490835892,"score_gpt":0.21579084981338512,"score_spread":0.20347296132254922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084134328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937681,0.000063884116,0.0000075635426,0.00005842693,0.0009808773,0.00011471899,0.000022863309,0.0000658573,0.004917694],"genre_scores_gemma":[0.9996742,0.0000053359295,0.00004327934,0.000045429555,0.00007225914,0.000025244353,0.0000703377,0.000013026155,0.000050860606],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999324,0.00007086991,0.00014230648,0.00021018382,0.000010677519,0.00024191648],"domain_scores_gemma":[0.9997433,0.000024111314,0.000015050547,0.00012018871,0.00007595016,0.000021402022],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000016781913,0.000108317756,0.00013431709,0.00006953812,0.00006986889,0.000011317918,0.000063203624,0.00012028202,0.0020782293],"category_scores_gemma":[0.00003375183,0.000090187554,0.000039949464,0.00009464713,0.000066516426,0.000115853094,0.000032433552,0.0001947113,0.00012084418],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010468028,0.0011779416,0.259021,0.0003930597,0.00015784874,0.00013298796,0.012883636,0.0000010986946,0.6712013,0.018764582,0.0020384653,0.023760052],"study_design_scores_gemma":[0.008851367,0.0043689655,0.804334,0.00027857133,0.00008810943,0.00078104023,0.0025711427,0.0000013955812,0.1492405,0.00022227703,0.028572692,0.0006899788],"about_ca_topic_score_codex":0.00044870784,"about_ca_topic_score_gemma":0.00044071715,"teacher_disagreement_score":0.54531294,"about_ca_system_score_codex":0.00001748195,"about_ca_system_score_gemma":0.00001846735,"threshold_uncertainty_score":0.998834},"labels":[],"label_agreement":null},{"id":"W2084389876","doi":"10.1016/j.vaccine.2004.09.010","title":"A novel intranasal Protollin™-based measles vaccine induces mucosal and systemic neutralizing antibody responses and cell-mediated immunity in mice","year":2004,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal General Hospital","funders":"","keywords":"Nasal administration; Neutralizing antibody; Measles virus; Adjuvant; Shigella flexneri; Antibody; Immunology; Immunity; Virology; Immunization; Neisseria meningitidis; Measles; Microbiology; Measles vaccine; Humoral immunity; Immunoglobulin A; Vaccination; Immunoglobulin G; Medicine; Immune system; Biology; Bacteria","score_opus":0.016839293414346826,"score_gpt":0.26167682390119373,"score_spread":0.24483753048684692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084389876","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99466914,0.0032027273,0.0001384848,0.0007123305,0.00031352456,0.00078476284,0.00005882621,0.00010623906,0.000013946862],"genre_scores_gemma":[0.9990298,0.00040519866,0.00020243782,0.00006795966,0.00004785546,0.00004630724,0.00014482425,0.000026574631,0.0000290257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985588,0.00020663998,0.0004809651,0.00036480327,0.0000206156,0.00036813752],"domain_scores_gemma":[0.99927026,0.00024008735,0.00015205072,0.00020745942,0.00008497811,0.0000451904],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040504272,0.0002888264,0.00047329057,0.00038792568,0.00022055226,0.000045648194,0.00012981625,0.00030879208,0.000039898354],"category_scores_gemma":[0.00011869864,0.00024554093,0.000040942858,0.00036713303,0.000024438355,0.000186276,0.000074429314,0.0004053788,0.000013063039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010371311,0.00031292735,0.026375635,0.00014913622,0.00004785006,0.000006217022,0.00024325613,0.000023864508,0.97153425,0.00006732721,0.000017861059,0.00018455632],"study_design_scores_gemma":[0.021668108,0.00079282874,0.36779004,0.0005396917,0.00010786888,0.0007358497,0.00053071935,0.000034861343,0.60635024,0.000049472103,0.0008157217,0.00058457634],"about_ca_topic_score_codex":0.003372933,"about_ca_topic_score_gemma":0.00065280363,"teacher_disagreement_score":0.36518398,"about_ca_system_score_codex":0.000043785105,"about_ca_system_score_gemma":0.00010872423,"threshold_uncertainty_score":0.9999997},"labels":[],"label_agreement":null},{"id":"W2084863404","doi":"10.1016/s0264-410x(03)00091-4","title":"Comments on the paper “The effectiveness of serogroup C meningococcal vaccine estimated from routine surveillance data” [P. Rivest, R. Allard, Vaccine 20 (2002) 2533–2536]","year":2003,"lang":"en","type":"letter","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Vaccination; Population; Medicine; Environmental health; Licensure; Confounding; Immunology","score_opus":0.027398855569348082,"score_gpt":0.2636896576896536,"score_spread":0.2362908021203055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084863404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6390272,0.009722622,0.00018376701,0.3281278,0.009533038,0.0044211457,0.007843433,0.0004735171,0.00066750427],"genre_scores_gemma":[0.63446105,0.0030688567,0.00029549355,0.25629517,0.0062559787,0.0006786474,0.090850614,0.0009370691,0.0071571236],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99216354,0.00393662,0.0013252778,0.00139863,0.0001329836,0.0010429649],"domain_scores_gemma":[0.9903347,0.0045421924,0.00095491204,0.0037379672,0.00037692316,0.00005330499],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.002246563,0.0012039143,0.0019194061,0.0002229069,0.00062792463,0.000096707554,0.0021016693,0.0015075412,0.006417002],"category_scores_gemma":[0.0006467894,0.00070965575,0.0003098226,0.00069572666,0.00005340871,0.00022835069,0.00079661707,0.0028919003,0.00063404074],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016390946,0.00034732747,0.018886022,0.00012103437,0.0021201884,0.000019005223,0.000030449104,0.000022675065,0.05719478,0.000056947545,0.9191682,0.00039432992],"study_design_scores_gemma":[0.006998781,0.00061707327,0.09433475,0.00043512727,0.0005136056,0.00010738056,0.000017885219,0.000025966237,0.008699908,0.00010285205,0.88734996,0.000796717],"about_ca_topic_score_codex":0.0026909695,"about_ca_topic_score_gemma":0.00052102964,"teacher_disagreement_score":0.08300718,"about_ca_system_score_codex":0.00011920946,"about_ca_system_score_gemma":0.00009741758,"threshold_uncertainty_score":0.9997887},"labels":[],"label_agreement":null},{"id":"W2084884889","doi":"10.1111/sji.12051","title":"Meningococcal Omp85 in Detergent‐Extracted Outer Membrane Vesicle Vaccines Induces High Levels of Non‐Functional Antibodies in Mice","year":2013,"lang":"en","type":"article","venue":"Scandinavian Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Norwegian Institute of Public Health; Universiteit Utrecht; University of Ottawa","keywords":"Bacterial outer membrane; Antibody; Microbiology; Biology; Heterologous; Virology; Antigen; Immune system; Meningococcal disease; Neisseria meningitidis; Immunology; Bacteria; Gene; Escherichia coli","score_opus":0.016644427810919557,"score_gpt":0.2451208055367327,"score_spread":0.22847637772581314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084884889","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99589807,0.0011209118,0.000040894014,0.00043909939,0.0022384436,0.00017243002,0.000013281687,0.000009259183,0.000067604175],"genre_scores_gemma":[0.99932563,0.0001564003,0.00014773659,0.000026905365,0.00008907823,0.000010753368,0.0000129253,0.000015987023,0.00021457097],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980782,0.00026327235,0.0010516546,0.00019223856,0.000030167603,0.00038446684],"domain_scores_gemma":[0.9988706,0.0001561953,0.0005710902,0.00015161077,0.00022530995,0.000025170495],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031317034,0.00021948373,0.0006782791,0.0007623315,0.0000716035,0.00001817344,0.0002523914,0.00033403165,0.0019530514],"category_scores_gemma":[0.000087662,0.00017970067,0.00012837506,0.00034131584,0.00014045129,0.0004599402,0.0000719208,0.00055488147,0.000069197646],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041633277,0.00025663478,0.059605993,0.00001324616,0.00022389309,0.000009346228,0.00032727243,0.00001231232,0.9347879,0.000051361036,0.00017920068,0.004116506],"study_design_scores_gemma":[0.0029163647,0.0004360537,0.73333716,0.00013047371,0.000022937902,0.00048231892,0.00028976638,0.0000018416947,0.261895,0.00017864417,0.0001786182,0.00013082306],"about_ca_topic_score_codex":0.0010038812,"about_ca_topic_score_gemma":0.00013180697,"teacher_disagreement_score":0.67373115,"about_ca_system_score_codex":0.00006786885,"about_ca_system_score_gemma":0.00007689599,"threshold_uncertainty_score":0.9989593},"labels":[],"label_agreement":null},{"id":"W2085159240","doi":"10.1097/00129492-200311000-00015","title":"Sensorineural Hearing Loss in Postmeningitic Children","year":2003,"lang":"en","type":"article","venue":"Otology & Neurotology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Sensorineural hearing loss; Streptococcus pneumoniae; Auditory brainstem response; Hearing loss; Meningitis; Pediatrics; Audiometry; Referral; Audiology; Antibiotics","score_opus":0.014035056351325745,"score_gpt":0.24827001765933707,"score_spread":0.23423496130801133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085159240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497646,0.000284924,0.000011382147,0.0004228621,0.0018382401,0.0004636987,0.000008020616,0.00011348509,0.0018809478],"genre_scores_gemma":[0.99887073,0.00003219445,0.000050116043,0.00031372785,0.000032310938,0.00009501011,0.0000318778,0.000027066786,0.00054697937],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997789,0.0006515427,0.00039132702,0.00048848276,0.000010094397,0.0006695175],"domain_scores_gemma":[0.9993293,0.00017963685,0.00009392725,0.0003305831,0.00003684284,0.00002967199],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014281635,0.00024684396,0.00046658207,0.00028684665,0.00014969696,0.0000093482095,0.0001613215,0.00039645887,0.0010453914],"category_scores_gemma":[0.00019119369,0.00024021168,0.00008827944,0.00023264643,0.00023643984,0.000078290635,0.00006618193,0.00052638986,0.00063354295],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008604742,0.00015148954,0.82691675,0.00000487614,0.000054560052,0.000065596156,0.000040950814,0.000008417491,0.162655,0.009600553,0.00019016775,0.00022557222],"study_design_scores_gemma":[0.0037009828,0.00056695385,0.8871074,0.000011157402,0.00004258546,0.021183059,0.000019786248,0.0000037415546,0.054916672,0.0006143608,0.031398166,0.00043514677],"about_ca_topic_score_codex":0.00022443186,"about_ca_topic_score_gemma":0.0001467646,"teacher_disagreement_score":0.107738316,"about_ca_system_score_codex":0.000022075088,"about_ca_system_score_gemma":0.000039446302,"threshold_uncertainty_score":0.9998678},"labels":[],"label_agreement":null},{"id":"W2085377092","doi":"10.1016/j.vaccine.2014.09.017","title":"Vaccine safety implications of Ontario, Canada's switch from DTaP–IPV to Tdap–IPV for the pre-school booster","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Ontario","funders":"","keywords":"Booster (rocketry); Tetanus; Medicine; Diphtheria; Pediatrics; Poliomyelitis; Adverse effect; Booster dose; Immunization; Vaccination; Internal medicine; Immunology","score_opus":0.008682775139123187,"score_gpt":0.22723830994493063,"score_spread":0.21855553480580744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085377092","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9786834,0.0003954968,0.004833135,0.012139028,0.0017581176,0.0010831144,0.00047166494,0.000052315994,0.0005837269],"genre_scores_gemma":[0.9902973,0.000020326774,0.00024830815,0.0009874441,0.00028299633,0.00012793856,0.0003621612,0.000027515574,0.0076460056],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99875134,0.000057628153,0.0005113171,0.00032862477,0.000020279094,0.00033078712],"domain_scores_gemma":[0.99838185,0.00043427266,0.00016836068,0.0007402023,0.00021551459,0.00005978013],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020324346,0.00021548916,0.0003925468,0.00006465424,0.0003194407,0.000017735489,0.00034716853,0.0001539087,0.0041598617],"category_scores_gemma":[0.00016049364,0.00014810529,0.00010459464,0.00015979727,0.000005108287,0.00006370125,0.000119962606,0.00019464214,0.00006160156],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017980176,0.0002200603,0.1169907,0.000025354284,0.0007574292,1.3291016e-7,0.00046475156,0.000108490945,0.5200739,0.0014616447,0.34037262,0.017726934],"study_design_scores_gemma":[0.0012481388,0.00014075902,0.4603536,0.0000119579945,0.000089333385,0.0000054432758,0.000016685512,0.0000036839913,0.012368488,0.00013775934,0.5255106,0.00011351246],"about_ca_topic_score_codex":0.86459446,"about_ca_topic_score_gemma":0.9717295,"teacher_disagreement_score":0.5077054,"about_ca_system_score_codex":0.00019475984,"about_ca_system_score_gemma":0.00038888984,"threshold_uncertainty_score":0.9967505},"labels":[],"label_agreement":null},{"id":"W2085713763","doi":"10.1016/j.vaccine.2006.06.037","title":"Booster vaccination in the elderly: Their success depends on the vaccine type applied earlier in life as well as on pre-vaccination antibody titers","year":2006,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur","keywords":"Vaccination; Medicine; Tetanus; Diphtheria; Booster dose; Immunology; Poliomyelitis; Antigen; Antibody titer; Antibody; Immunization; Booster (rocketry); Immune system; Virology; Titer","score_opus":0.00923686962974538,"score_gpt":0.25734426376693725,"score_spread":0.24810739413719188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085713763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9751791,0.0002722556,0.000012864262,0.00587557,0.00075883506,0.00094831263,0.000008956535,0.00006682736,0.016877305],"genre_scores_gemma":[0.9959474,0.000116315976,0.000002764061,0.0013443023,0.00022004971,0.000074119955,0.0003350239,0.00003736204,0.0019226166],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981298,0.00036952895,0.0005447461,0.0004600834,0.00006285751,0.00043297152],"domain_scores_gemma":[0.99866164,0.000439501,0.00020706447,0.000573521,0.000094059586,0.000024213352],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006879043,0.00035541368,0.00035617105,0.0004419584,0.0002476486,0.000094186784,0.00043128512,0.00032250967,0.0045969808],"category_scores_gemma":[0.00013918303,0.00020474975,0.00008188805,0.0007822405,0.000005397157,0.00018220946,0.00006986626,0.000588125,0.0016509811],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013893077,0.0056247585,0.20393021,0.00013520113,0.00043621036,0.000030672272,0.002570167,0.0015165373,0.5484809,0.057448845,0.11909867,0.046834726],"study_design_scores_gemma":[0.0049358234,0.0012815968,0.8789109,0.00005606744,0.00003747926,0.00003899688,0.0002751724,0.00003118495,0.03553732,0.0011493613,0.07737368,0.0003724414],"about_ca_topic_score_codex":0.0013213932,"about_ca_topic_score_gemma":0.0013789149,"teacher_disagreement_score":0.67498064,"about_ca_system_score_codex":0.000083541854,"about_ca_system_score_gemma":0.000057563368,"threshold_uncertainty_score":0.9991264},"labels":[],"label_agreement":null},{"id":"W2086007135","doi":"10.1086/320748","title":"Acute Childhood Encephalitis and<i>Mycoplasma pneumoniae</i>","year":2001,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":175,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Mycoplasma pneumoniae; Encephalitis; Medicine; Mycoplasmataceae; Serology; Mollicutes; Polymerase chain reaction; Immunology; Cerebrospinal fluid; Virology; Mycoplasma; Microbiology; Pneumonia; Pathology; Virus; Internal medicine; Biology; Antibody; Gene","score_opus":0.01465253415156646,"score_gpt":0.2987940662985715,"score_spread":0.28414153214700505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086007135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934074,0.0013556576,0.000033462642,0.00032971648,0.0025413504,0.0001953994,0.000114524926,0.00036346164,0.0016590199],"genre_scores_gemma":[0.994099,0.0038353414,0.0000024659862,0.00047863615,0.00029499526,0.000043784836,0.00009228326,0.000020963253,0.0011325078],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985252,0.00022443887,0.00047848176,0.00041821285,0.000015886335,0.00033776005],"domain_scores_gemma":[0.999007,0.00040275534,0.00012479333,0.0002868187,0.00007263371,0.00010603333],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012743805,0.00021041815,0.00040691844,0.00007128752,0.00032716896,0.000053828564,0.000107779255,0.00026308413,0.00123866],"category_scores_gemma":[0.00026168936,0.00018101197,0.00021506487,0.0001702494,0.00027176886,0.0001671177,0.00011298879,0.00027590318,0.0007335009],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041659434,0.000970961,0.95943296,0.0000064651276,0.00041173724,0.000013810266,0.000033558397,6.957775e-7,0.003880985,0.00071990216,0.0047376296,0.029749665],"study_design_scores_gemma":[0.0032281785,0.00092536997,0.8363431,0.000036890873,0.00045321026,0.0010727108,0.00003599352,0.0000020778002,0.00026119046,0.0015888948,0.15562634,0.0004260508],"about_ca_topic_score_codex":0.00004268643,"about_ca_topic_score_gemma":0.000041276704,"teacher_disagreement_score":0.15088871,"about_ca_system_score_codex":0.000014993655,"about_ca_system_score_gemma":0.000050991926,"threshold_uncertainty_score":0.9996743},"labels":[],"label_agreement":null},{"id":"W2086965801","doi":"10.1097/inf.0b013e31819040e7","title":"The Impact of Childhood Meningococcal Serogroup C Conjugate Vaccine Programs in Canada","year":2009,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Alberta; BC Children's Hospital; Dalhousie University; Children's Hospital of Eastern Ontario; Stollery Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Meningococcal disease; Incidence (geometry); Case fatality rate; Meningococcal vaccine; Pediatrics; Immunization; Population; Conjugate vaccine; Neisseria meningitidis; Confidence interval; Demography; Vaccination; Immunology; Environmental health; Internal medicine; Antibody","score_opus":0.006748739236472814,"score_gpt":0.22538932516155802,"score_spread":0.2186405859250852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086965801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641347,0.0019949137,0.0000053048075,0.00038508317,0.00077285664,0.00028983675,0.0000139091335,0.000021595832,0.000103023594],"genre_scores_gemma":[0.9986363,0.0008619121,9.76915e-7,0.00003237582,0.0004111175,0.000010975995,0.0000079245565,0.000009835981,0.00002854621],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99866164,0.0002788156,0.00046527328,0.00011987783,0.000037134505,0.00043727562],"domain_scores_gemma":[0.9991108,0.00016134368,0.00031068834,0.00021975103,0.000117336436,0.00008008579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039435935,0.00018462623,0.00023877747,0.00009455162,0.00057131046,0.000056035664,0.00023316106,0.000059691796,0.0001441873],"category_scores_gemma":[0.00011092963,0.00009237467,0.00019838332,0.00037829677,0.000027214592,0.00009207586,0.000034203073,0.0005382192,0.000010982913],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029611803,0.00037836956,0.98769724,0.000003274026,0.00015503999,0.000006506324,0.00014399961,0.00036559862,0.00082291814,0.00005292495,0.0017172787,0.008360742],"study_design_scores_gemma":[0.0016553245,0.00044232944,0.9960199,0.000008110047,0.00012646602,0.00050617056,0.000074863376,0.000013279946,0.000028626313,0.00073100405,0.000269378,0.000124566],"about_ca_topic_score_codex":0.17520086,"about_ca_topic_score_gemma":0.100454666,"teacher_disagreement_score":0.0747462,"about_ca_system_score_codex":0.0002605959,"about_ca_system_score_gemma":0.0012472325,"threshold_uncertainty_score":0.9159597},"labels":[],"label_agreement":null},{"id":"W2087349850","doi":"10.1111/j.1462-5822.2006.00803.x","title":"T-cell stimulating protein A (TspA) of Neisseria meningitidis is required for optimal adhesion to human cells","year":2006,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Meningitis Research Foundation","keywords":"Neisseria meningitidis; Pilus; Microbiology; Neisseria; Biofilm; Biology; Bacteria; Gene; Biochemistry; Genetics; Escherichia coli","score_opus":0.014836992020296903,"score_gpt":0.2441812011581959,"score_spread":0.229344209137899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087349850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954152,0.0004693906,0.0019753855,0.00008401856,0.0005178977,0.0010441245,0.00021202938,0.00006868612,0.0002132815],"genre_scores_gemma":[0.9919157,0.0000011865407,0.0022842975,0.000035647412,0.00009578493,0.000092808434,0.0006725584,0.0000404181,0.0048616217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982761,0.00013375845,0.0005997391,0.00047752203,0.000006764916,0.0005060885],"domain_scores_gemma":[0.9991526,0.00006981922,0.00026046686,0.00033772943,0.00015323616,0.000026161948],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021862323,0.00027502404,0.0004980168,0.00017670236,0.0002784865,0.00001552039,0.00022021492,0.0004276396,0.0006151604],"category_scores_gemma":[0.000017372995,0.00026274973,0.00019841564,0.00015771567,0.00010275298,0.00005528094,0.00012087859,0.00013386857,0.00016033663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014979098,0.00019987974,0.00014411613,0.000064554464,0.000045192497,4.6992253e-7,0.00012941271,0.000052232033,0.99380046,0.00028329768,0.005055759,0.00007485738],"study_design_scores_gemma":[0.0015856996,0.0009408295,0.00010689073,0.00004239925,0.00004730697,0.000010404496,0.00005188528,0.0000066026523,0.9641392,0.00007431123,0.032722328,0.00027211758],"about_ca_topic_score_codex":0.00029954783,"about_ca_topic_score_gemma":0.000018825438,"teacher_disagreement_score":0.029661212,"about_ca_system_score_codex":0.000036103556,"about_ca_system_score_gemma":0.00003716346,"threshold_uncertainty_score":0.9999825},"labels":[],"label_agreement":null},{"id":"W2087387372","doi":"10.1038/ng.640","title":"Genome-wide association study identifies variants in the CFH region associated with host susceptibility to meningococcal disease","year":2010,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":289,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Wellcome Trust","keywords":"Biology; Genetics; Genome-wide association study; Meningococcal disease; Host (biology); Genome; Genetic association; Disease; Neisseria meningitidis; Gene; Genotype; Single-nucleotide polymorphism; Bacteria","score_opus":0.008879665677184354,"score_gpt":0.25181871563967795,"score_spread":0.2429390499624936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087387372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99692637,0.00012257825,0.000010665093,0.00091798534,0.0011875768,0.0007084656,0.000027722823,0.00003523105,0.00006342286],"genre_scores_gemma":[0.9990475,0.000008281414,0.000010574235,0.00023414847,0.00009873849,0.00004192032,0.00007648436,0.000012065351,0.00047024508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988549,0.0003501641,0.00020557009,0.00028638975,0.000046775738,0.00025622695],"domain_scores_gemma":[0.9990332,0.00027201453,0.000119733246,0.0003673441,0.00018050945,0.000027198364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068889343,0.00014382754,0.00017121831,0.00008256272,0.0002068518,0.000064336775,0.00022417995,0.00040340496,0.00006581972],"category_scores_gemma":[0.0011021177,0.000097818076,0.00003909765,0.00032165283,0.00002761905,0.000048399063,0.00005985664,0.00087899214,0.000031094703],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011828876,0.000471449,0.92805094,0.0000021687108,0.000080896665,0.000003646107,0.0009780627,0.00000446078,0.069557756,0.000009528885,0.00068069773,0.000042118074],"study_design_scores_gemma":[0.000794108,0.00021744714,0.99502736,0.0000065471972,0.00007449421,0.0000019389993,0.0002710051,6.195107e-7,0.00072585343,0.000057368437,0.002695686,0.0001275403],"about_ca_topic_score_codex":0.000061859566,"about_ca_topic_score_gemma":0.0067246035,"teacher_disagreement_score":0.068831906,"about_ca_system_score_codex":0.00006878552,"about_ca_system_score_gemma":0.000055082928,"threshold_uncertainty_score":0.39889055},"labels":[],"label_agreement":null},{"id":"W2087412934","doi":"10.4161/hv.1.5.2079","title":"Safety and Immunogenicity of a Pentavalent Combination Vaccine (Diphtheria, Tetanus, Acellular Pertussis, Polio and Haemophilus Influenzae Type b Conjugate) When Administered as a Fourth Dose at 15 to 18 Months of Age","year":2005,"lang":"en","type":"article","venue":"Human Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital","funders":"Sanofi Pasteur","keywords":"Medicine; Tetanus; Diphtheria; Booster dose; Poliomyelitis; Vaccination; Immunogenicity; Immunization; Immunology; Vaccination schedule; Adverse effect; Conjugate vaccine; Haemophilus influenzae; Hib vaccine; Pediatrics; Internal medicine; Antibody; Antibiotics","score_opus":0.02343117416936941,"score_gpt":0.27510803242843257,"score_spread":0.25167685825906316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087412934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99342674,0.004938547,0.0000049924265,0.00042706906,0.00022918911,0.0005746875,0.00005820011,0.00003898476,0.00030158448],"genre_scores_gemma":[0.9966499,0.0004411299,0.0000690407,0.00009928285,0.00005797257,0.000012627892,0.00011298164,0.00002727554,0.0025297457],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99853057,0.00014842831,0.0006774739,0.00034633192,0.00003497964,0.00026220822],"domain_scores_gemma":[0.9989929,0.00006763128,0.0003044459,0.00038011756,0.00019543071,0.000059445516],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021608044,0.00027967975,0.000616849,0.00021454997,0.00025835691,0.000023057331,0.00015721892,0.00020005397,0.0018542629],"category_scores_gemma":[0.000070677204,0.00024368502,0.000085696905,0.00013642367,0.000058259677,0.00014136851,0.0002763696,0.000107115,0.00003013619],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028312241,0.00036100135,0.026264675,0.00009109688,0.00033243393,0.0000026941693,0.0016378958,0.000005622634,0.96492326,0.00052969734,0.0010583884,0.0019620338],"study_design_scores_gemma":[0.012798832,0.0029415435,0.7311032,0.00019074217,0.00037161977,0.0003022986,0.00031165886,0.000013372262,0.1847556,0.00037792278,0.066236444,0.00059676723],"about_ca_topic_score_codex":0.0012392061,"about_ca_topic_score_gemma":0.001524852,"teacher_disagreement_score":0.78016764,"about_ca_system_score_codex":0.000052557254,"about_ca_system_score_gemma":0.000030518437,"threshold_uncertainty_score":0.9990582},"labels":[],"label_agreement":null},{"id":"W2088107697","doi":"10.1016/j.diagmicrobio.2006.04.012","title":"Multiple combination antibiotic susceptibility testing of nontypeable Haemophilus influenzae biofilms","year":2006,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Public Health; Children's Hospital of Eastern Ontario; Agricultural Research Institute of Ontario; University of Ottawa","funders":"GlaxoSmithKline","keywords":"Haemophilus influenzae; Antibiotics; Microbiology; Biofilm; Ciprofloxacin; Biology; Bacteria","score_opus":0.010082052913152888,"score_gpt":0.22238929245769792,"score_spread":0.21230723954454503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088107697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99590474,0.0018157277,0.000053324067,0.000045172834,0.0008015437,0.0004084043,0.00023632433,0.0001251372,0.00060963654],"genre_scores_gemma":[0.9991436,0.00005137159,0.000038560596,0.00006296446,0.00005449485,0.000016649787,0.00051682,0.000016045198,0.000099465935],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862057,0.0002077792,0.0004392806,0.0003876945,0.000009079369,0.000335599],"domain_scores_gemma":[0.99802846,0.0012525405,0.00021079111,0.00026163014,0.00020390126,0.000042704694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002036964,0.0002339658,0.00035961863,0.00016102317,0.00030302402,0.000017810315,0.00008872185,0.00025588885,0.00018252362],"category_scores_gemma":[0.0016686243,0.00021458654,0.00008498478,0.00023407019,0.00041197147,0.00011873482,0.00008790631,0.0001804319,0.00007831221],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057367793,0.0004795685,0.5408172,0.000054745153,0.00003802417,0.0000017744617,0.0000106644975,0.000025810044,0.45668736,0.00074801996,0.0005488421,0.0005306163],"study_design_scores_gemma":[0.0025998165,0.0004259914,0.9215404,0.000081647195,0.00015366793,0.00009924251,0.000015485415,0.000024517532,0.07148414,0.00079860655,0.0024639468,0.00031258148],"about_ca_topic_score_codex":0.0015970964,"about_ca_topic_score_gemma":0.00025415796,"teacher_disagreement_score":0.3852032,"about_ca_system_score_codex":0.000030735962,"about_ca_system_score_gemma":0.00006539505,"threshold_uncertainty_score":0.87505853},"labels":[],"label_agreement":null},{"id":"W2088683218","doi":"10.1128/jcm.06437-11","title":"Bordetella holmesii, an Emerging Cause of Septic Arthritis","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Public Health; Public Health Ontario; McMaster University","funders":"","keywords":"Septic arthritis; Bacteremia; Medicine; Pathogen; Microbiology; Arthritis; Opportunistic pathogen; Enterobacteriaceae Infections; Bordetella; Immunology; Biology; Bacteria; Enterobacteriaceae; Antibiotics; Bordetella pertussis","score_opus":0.04759715813283412,"score_gpt":0.36394103669104,"score_spread":0.3163438785582059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088683218","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934405,0.0016354321,0.00006669115,0.0004410441,0.004106195,0.0001158688,0.000017629625,0.000013637237,0.00016301309],"genre_scores_gemma":[0.99769855,0.0010449507,0.00037063655,0.00018846095,0.00034152067,0.00000216692,0.000017379329,0.0000152216535,0.0003211069],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99692833,0.00062290294,0.0019600934,0.00018870978,0.0000085359,0.0002914198],"domain_scores_gemma":[0.99764025,0.0004967731,0.0011348666,0.00025696727,0.00040967812,0.000061469116],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00087257137,0.00016216659,0.0009163873,0.00016099139,0.00006987525,0.000012557251,0.00027211782,0.0004982258,0.0034194863],"category_scores_gemma":[0.00045695034,0.00012207491,0.0003618462,0.00011120379,0.00029911858,0.0002005164,0.00006841197,0.0005847622,0.00027357897],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014769033,0.00039182912,0.018304614,0.000008101409,0.00033965416,0.0000034824034,0.000055477,0.0000030437043,0.94193685,0.00008668747,0.0077726534,0.030949898],"study_design_scores_gemma":[0.01535382,0.0143801,0.23640832,0.00041933756,0.0005122979,0.009071486,0.0006920049,0.000006921271,0.21722274,0.0017836496,0.5031464,0.0010028927],"about_ca_topic_score_codex":0.000081785365,"about_ca_topic_score_gemma":0.00003822122,"teacher_disagreement_score":0.72471416,"about_ca_system_score_codex":0.000010502996,"about_ca_system_score_gemma":0.00009959289,"threshold_uncertainty_score":0.99749154},"labels":[],"label_agreement":null},{"id":"W2088769576","doi":"10.1016/j.vaccine.2014.09.052","title":"Safety of immunization during pregnancy: A review of the evidence of selected inactivated and live attenuated vaccines","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":212,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"World Health Organization","keywords":"Medicine; Tetanus; Vaccination; Pregnancy; Immunization; Toxoid; Rubella; Immunology; Poliomyelitis; Pandemic; Intensive care medicine; Pediatrics; Obstetrics; Measles; Infectious disease (medical specialty); Disease; Antibody; Coronavirus disease 2019 (COVID-19); Internal medicine","score_opus":0.009985147165380188,"score_gpt":0.23650244990574568,"score_spread":0.2265173027403655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088769576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97101134,0.028193215,0.000022459993,0.00029233412,0.00012514651,0.00031167248,0.000006932121,0.000017711769,0.000019200761],"genre_scores_gemma":[0.9821014,0.017719315,0.000017495158,0.0000109137245,0.000009088436,0.0000045554525,0.000016450831,0.000008413928,0.00011238274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902093,0.00026973494,0.0004668386,0.00012679526,0.000015109527,0.00010060398],"domain_scores_gemma":[0.9985879,0.00015601178,0.0004501823,0.00029810026,0.0005008408,0.000006945731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014620359,0.00010652379,0.0003812102,0.000062563675,0.00007027802,0.0000014696836,0.00012621089,0.000089905305,0.00022176308],"category_scores_gemma":[0.00069187285,0.00006977758,0.000045971807,0.0005583177,0.000016510307,0.00008875205,0.00009057486,0.00009533449,0.0000022541956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020152834,0.000053340835,0.05150468,0.0020105883,0.00009419102,2.1150955e-8,0.000089074674,0.0000015540751,0.94500566,0.000053554344,0.00006972077,0.00091612036],"study_design_scores_gemma":[0.0008428099,0.00015445646,0.4835655,0.013796226,0.00009063827,0.000018602668,0.000011408411,0.0000043752375,0.5012656,0.0000095598825,0.00018147205,0.000059363032],"about_ca_topic_score_codex":0.0002568118,"about_ca_topic_score_gemma":0.000029417146,"teacher_disagreement_score":0.44374004,"about_ca_system_score_codex":0.000010000407,"about_ca_system_score_gemma":0.000026401554,"threshold_uncertainty_score":0.28454474},"labels":[],"label_agreement":null},{"id":"W2088973057","doi":"10.1371/journal.ppat.1004341","title":"Global Analysis of Neutrophil Responses to Neisseria gonorrhoeae Reveals a Self-Propagating Inflammatory Program","year":2014,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Neisseria gonorrhoeae; Innate immune system; Gonorrhea; Opsonin; Immunology; Biology; Microbiology; Syk; Inflammation; Phagocytosis; Signal transduction; Immune system; Cell biology","score_opus":0.013091234506820745,"score_gpt":0.26160401258928057,"score_spread":0.2485127780824598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088973057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984307,0.000088297515,0.000024028506,0.0000826058,0.00027260912,0.0003845105,0.00014609507,0.00023788174,0.00033321913],"genre_scores_gemma":[0.998715,0.000009557463,0.0008621037,0.000057734054,0.00006833346,0.000099416866,0.00006338833,0.000014611357,0.00010989919],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99851906,0.00038457924,0.00044772052,0.00031620468,0.000012569633,0.00031983465],"domain_scores_gemma":[0.9990221,0.00011014201,0.00019808472,0.00043592104,0.0001862258,0.000047516747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029743047,0.00018571479,0.0004890452,0.00019379324,0.0001510681,0.000022693586,0.00017117489,0.00017763807,0.00018775843],"category_scores_gemma":[0.00025657922,0.00016540209,0.00020307435,0.0009811036,0.000037951108,0.00005933444,0.00009996478,0.00008868403,0.000114691225],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001311849,0.00029444246,0.2433642,0.00002501329,0.0011454151,3.2326528e-7,0.000114409515,0.000022257136,0.7514125,0.00033788863,0.00008401019,0.0030683477],"study_design_scores_gemma":[0.00043905227,0.00062272506,0.9771514,0.0000345101,0.001687314,0.000012860487,0.00005553719,0.00007283383,0.012566727,0.000044630193,0.007053736,0.00025867161],"about_ca_topic_score_codex":0.000048855214,"about_ca_topic_score_gemma":0.00008957742,"teacher_disagreement_score":0.73884577,"about_ca_system_score_codex":0.000037978058,"about_ca_system_score_gemma":0.00004411959,"threshold_uncertainty_score":0.67449015},"labels":[],"label_agreement":null},{"id":"W2089163713","doi":"10.1007/s11552-011-9372-2","title":"<i>Haemophilus Influenzae</i> Serotype a as the Causative Agent of a Pediatric Upper Extremity Infection","year":2011,"lang":"en","type":"article","venue":"Hand","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Dalhousie University","funders":"","keywords":"Epiglottitis; Medicine; Serotype; Haemophilus influenzae; Meningitis; Bacteremia; Pneumonia; Virology; Vaccination; Immunology; Microbiology; Pediatrics; Antibiotics; Internal medicine; Biology","score_opus":0.034525918919606394,"score_gpt":0.2566075565634271,"score_spread":0.22208163764382072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089163713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948586,0.00053978973,0.00003378134,0.000029882636,0.0008323839,0.0001782366,0.000009890903,0.00002481094,0.0034926075],"genre_scores_gemma":[0.9989862,0.00018615765,0.000009159681,0.000065966655,0.000087532295,0.000022066972,0.0000074331297,0.000006700056,0.0006288208],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99945176,0.000107176,0.00017028094,0.00012499292,0.0000105847375,0.00013519533],"domain_scores_gemma":[0.99956673,0.000043178636,0.00010784527,0.00017967429,0.00009113073,0.000011456114],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011986592,0.00009768662,0.00013874617,0.00006006403,0.0001902537,0.000008114998,0.00006263195,0.00012710337,0.0011516736],"category_scores_gemma":[0.00004907844,0.000063326304,0.00006498761,0.00015852117,0.000090785354,0.00007091299,0.000050172777,0.00013284698,0.00032835006],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060266117,0.00047927687,0.5513744,0.000040769668,0.00036500604,0.0000023450123,0.008171437,0.0000028358163,0.4277124,0.0020256275,0.0059433533,0.0032799197],"study_design_scores_gemma":[0.0012438009,0.00040608502,0.74663204,0.000013979417,0.00020613891,0.00012370056,0.000096913245,7.125521e-7,0.21418557,0.000939419,0.03595916,0.00019244949],"about_ca_topic_score_codex":0.0021618938,"about_ca_topic_score_gemma":0.00017161047,"teacher_disagreement_score":0.21352684,"about_ca_system_score_codex":0.00001225915,"about_ca_system_score_gemma":0.000034838362,"threshold_uncertainty_score":0.9997614},"labels":[],"label_agreement":null},{"id":"W2089591326","doi":"10.1097/00006454-200301000-00009","title":"Pertussis resurgence in Canada largely caused by a cohort effect","year":2003,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval; Institut National de Santé Publique du Québec","funders":"","keywords":"Medicine; Incidence (geometry); Cohort; Pediatrics; Demography; Christian ministry; Population; Cohort effect; Cohort study; Environmental health; Internal medicine","score_opus":0.004069257356300478,"score_gpt":0.2006759890337699,"score_spread":0.19660673167746942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089591326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99317366,0.003115306,0.000021294241,0.00018349489,0.002709957,0.00024093287,0.000044186694,0.000026396063,0.00048476233],"genre_scores_gemma":[0.9982984,0.0010145528,5.8190375e-7,0.00014076734,0.00017513524,0.000036881414,0.000009732344,0.00001671198,0.00030725953],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980692,0.00087862415,0.00036034276,0.00018677952,0.000046556408,0.0004584869],"domain_scores_gemma":[0.9990594,0.000377367,0.00017152529,0.00021687869,0.00007160041,0.00010326108],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007305731,0.00019858676,0.00025635725,0.00012910579,0.0005492315,0.00004419477,0.00014383857,0.00008035691,0.001268983],"category_scores_gemma":[0.0005474441,0.00012969546,0.00011190244,0.00039730722,0.000029674175,0.00009615536,0.00002421231,0.0005615273,0.000069950416],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062637475,0.000082444334,0.96492636,0.000008841039,0.000074401716,0.000015219864,0.000022674278,0.0000358858,0.0011438314,0.000025435564,0.033442736,0.00015953407],"study_design_scores_gemma":[0.0022968047,0.00013749267,0.9680966,0.00001087615,0.0004041666,0.00066909916,0.000044530174,0.0000050603926,0.00044439462,0.00017089429,0.027368916,0.00035115768],"about_ca_topic_score_codex":0.22222239,"about_ca_topic_score_gemma":0.11328594,"teacher_disagreement_score":0.10893646,"about_ca_system_score_codex":0.00037302304,"about_ca_system_score_gemma":0.0013232968,"threshold_uncertainty_score":0.999644},"labels":[],"label_agreement":null},{"id":"W2089917879","doi":"10.1177/09680519010070011101","title":"Structural variability and originality of the Bordetella endotoxins","year":2001,"lang":"en","type":"article","venue":"Journal of Endotoxin Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Medical Research Council","keywords":"Bordetella pertussis; Bordetella; Bordetella bronchiseptica; Stereochemistry; Microbiology; Chemistry; Biochemistry; Biology; Bacteria; Genetics","score_opus":0.06077726012642659,"score_gpt":0.3686065299473763,"score_spread":0.3078292698209497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089917879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971216,0.00046746823,0.000008228174,0.0004007301,0.00068596314,0.00016268523,0.000010267594,0.0000035310777,0.0011395408],"genre_scores_gemma":[0.99896914,0.00030456635,0.000041526193,0.000007728389,0.00010930407,0.00000231891,6.438962e-7,0.0000052941195,0.00055949844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981334,0.0010115133,0.00041749649,0.00011257547,0.000069826936,0.0002551459],"domain_scores_gemma":[0.99835867,0.0006331109,0.00019907625,0.0002539709,0.0005237919,0.000031370746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002478286,0.0000830475,0.00024570408,0.00012483215,0.00022866619,0.000020617887,0.0002776563,0.000114763345,0.0007855489],"category_scores_gemma":[0.0008046402,0.00004756653,0.00010770977,0.00029763344,0.00037227056,0.00010201061,0.00013720621,0.00067980087,0.000005337053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002920746,0.00007626317,0.13867202,0.000022403116,0.00008167588,0.000002423675,0.00008993705,0.0000023365699,0.8565281,0.0015205579,0.00049370166,0.0022185128],"study_design_scores_gemma":[0.002005607,0.00062324933,0.41025665,0.00006995671,0.000035297504,0.0018307605,0.0001909706,0.0000052961204,0.47127733,0.0031796375,0.1104096,0.000115655435],"about_ca_topic_score_codex":0.00012237817,"about_ca_topic_score_gemma":0.000027095713,"teacher_disagreement_score":0.38525075,"about_ca_system_score_codex":0.00004183066,"about_ca_system_score_gemma":0.00013922241,"threshold_uncertainty_score":0.8601209},"labels":[],"label_agreement":null},{"id":"W2090669764","doi":"10.1097/01.inf.0000202082.56403.c4","title":"How Soon After a Prior Tetanus-Diphtheria Vaccination Can One Give Adult Formulation Tetanus-Diphtheria-Acellular Pertussis Vaccine?","year":2006,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); Health PEI; Dalhousie University","funders":"","keywords":"Medicine; Tetanus; Reactogenicity; Diphtheria; Toxoid; Vaccination; Erythema; Pediatrics; Immunization; Adverse effect; Diphtheria toxin; Anesthesia; Surgery; Immunology; Internal medicine; Antibody","score_opus":0.005812351035288099,"score_gpt":0.1981017367754967,"score_spread":0.1922893857402086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090669764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901508,0.0028767718,0.00094104244,0.0024114696,0.0023260384,0.00069668156,0.000106618405,0.00018837367,0.00030221412],"genre_scores_gemma":[0.9940421,0.0006177512,0.000037180525,0.00012725254,0.0030080082,0.00012309944,0.00009336751,0.00007136658,0.0018799037],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99762046,0.0004996496,0.00066914305,0.00040649605,0.00011645676,0.00068780204],"domain_scores_gemma":[0.9979652,0.00017128396,0.0006593514,0.0004585046,0.00061748835,0.00012817653],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043387164,0.00047543942,0.00045016085,0.00039794468,0.0013001324,0.00042372494,0.00026417273,0.00030364748,0.0017997322],"category_scores_gemma":[0.0002618294,0.00034026743,0.00041778138,0.00053938874,0.000031219337,0.00052999123,0.0000883286,0.00066300936,0.00013396784],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039581647,0.0032414352,0.8607676,0.00025823433,0.0013436594,0.00007154974,0.0012719047,0.0005769154,0.09799041,0.001175069,0.011499709,0.01784533],"study_design_scores_gemma":[0.0063924235,0.00056635926,0.9742463,0.000038728194,0.0022926924,0.0011332072,0.00019415998,0.00016784217,0.0018881431,0.004930574,0.0071680467,0.0009815275],"about_ca_topic_score_codex":0.00038642922,"about_ca_topic_score_gemma":0.00040027878,"teacher_disagreement_score":0.113478675,"about_ca_system_score_codex":0.00030683063,"about_ca_system_score_gemma":0.00022910017,"threshold_uncertainty_score":0.99996984},"labels":[],"label_agreement":null},{"id":"W2090951359","doi":"10.1016/s0923-2508(01)01272-4","title":"Characterization of recombinant Bordetella pertussis adenylate cyclase toxins carrying passenger proteins","year":2001,"lang":"en","type":"article","venue":"Research in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Institut national de la recherche scientifique","keywords":"Adenylate Cyclase Toxin; Bordetella pertussis; Biology; Recombinant DNA; Toxin; Bordetella; Biochemistry; Cyclase; Pertussis toxin; Antigenicity; Microbiology; G protein; Bacteria; Antigen; Enzyme; Receptor","score_opus":0.05065936487062355,"score_gpt":0.328386292033619,"score_spread":0.27772692716299546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090951359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966332,0.00039374005,0.000029444289,0.0009840358,0.00093016314,0.0005793806,0.000044420056,0.000034336736,0.0003712793],"genre_scores_gemma":[0.9962524,0.0012003566,0.00003261508,0.00002104497,0.00006293931,0.0000893499,0.00032565495,0.000022540178,0.001993077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99734485,0.0010112629,0.00049963983,0.0004052533,0.000017559301,0.00072145794],"domain_scores_gemma":[0.9990695,0.00019720658,0.00011883949,0.00034673893,0.00023665951,0.000031026007],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009910668,0.00017453067,0.0003993573,0.0006125014,0.00020531507,0.000017554783,0.0002470045,0.00045764464,0.0010438871],"category_scores_gemma":[0.0001424767,0.00014891416,0.0000835066,0.0006418377,0.00027243185,0.0001071989,0.00017042189,0.0006017143,0.00024707316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002378097,0.0002803107,0.009135864,0.000032183863,0.00004955854,0.000009233508,0.000191588,9.169114e-7,0.9841152,0.00015716018,0.00021319483,0.005577009],"study_design_scores_gemma":[0.0015753626,0.0005858437,0.024060903,0.00014507183,0.000010251645,0.00035748057,0.00014396785,0.000005941451,0.77296424,0.00010171817,0.1997954,0.00025381424],"about_ca_topic_score_codex":0.00069896894,"about_ca_topic_score_gemma":0.00034826813,"teacher_disagreement_score":0.21115093,"about_ca_system_score_codex":0.000102344864,"about_ca_system_score_gemma":0.00011406177,"threshold_uncertainty_score":0.9998693},"labels":[],"label_agreement":null},{"id":"W2091076501","doi":"10.1128/iai.00293-12","title":"Invasive Potential of Nonencapsulated Disease Isolates of Neisseria meningitidis","year":2012,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; Institute for Biological Sciences; Public Health Agency of Canada; Public Health Ontario; University of Toronto","funders":"National Institutes of Health","keywords":"Virulence; Biology; Neisseria meningitidis; Microbiology; Bacterial capsule; Gene; Virulence factor; Pathogen; Virology; Bacteria; Genetics","score_opus":0.012273939723146677,"score_gpt":0.2396814888617941,"score_spread":0.22740754913864744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091076501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99790394,0.00082848343,0.00006374422,0.000016893986,0.0008293122,0.000090850226,0.000022514037,0.000026770891,0.00021750701],"genre_scores_gemma":[0.99951524,0.00028665076,0.0000075364514,0.000005671514,0.000023863759,0.000004660867,0.000058248865,0.000005888576,0.000092217655],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994476,0.0001353775,0.00021542386,0.000064054475,0.000005826134,0.00013174587],"domain_scores_gemma":[0.99956363,0.000043611668,0.00013576342,0.0001332319,0.00009611242,0.000027635817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012886302,0.00008872686,0.00016897444,0.000093517534,0.00013038586,0.0000051992934,0.000032393167,0.00009641268,0.0006598667],"category_scores_gemma":[0.00008510818,0.000078542944,0.000062569234,0.00011789909,0.00009814821,0.00020373017,0.000051583414,0.00010929273,0.000016847296],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012376688,0.00021619107,0.111975506,0.00003216733,0.000089907204,2.3343958e-8,0.00018360272,0.0000027030992,0.88648844,0.0002328409,0.00005415054,0.00060069823],"study_design_scores_gemma":[0.00050753175,0.000118141994,0.7111044,0.000024506038,0.00006493923,0.000017878718,0.000061664265,0.0000027293634,0.28713852,0.00006592293,0.0008195653,0.00007420524],"about_ca_topic_score_codex":0.0016285076,"about_ca_topic_score_gemma":0.000017449609,"teacher_disagreement_score":0.5993499,"about_ca_system_score_codex":0.0000069766866,"about_ca_system_score_gemma":0.000020581088,"threshold_uncertainty_score":0.7225078},"labels":[],"label_agreement":null},{"id":"W2091543537","doi":"10.1001/jama.292.20.2491","title":"Effectiveness of a Mass Immunization Campaign Using Serogroup C Meningococcal Conjugate Vaccine","year":2004,"lang":"en","type":"article","venue":"JAMA","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"GlaxoSmithKline","keywords":"Medicine; Meningococcal vaccine; Conjugate vaccine; Meningococcal disease; Immunization; Incidence (geometry); Outbreak; Vaccination; Neisseria meningitidis; Confidence interval; Virology; Pediatrics; Immunology; Internal medicine; Antigen","score_opus":0.01160377575800188,"score_gpt":0.25272043556603035,"score_spread":0.2411166598080285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091543537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99189943,0.0002753981,0.0067992336,0.000036793794,0.0006003391,0.00021572315,0.000013676218,0.00005240837,0.000106968844],"genre_scores_gemma":[0.9995173,0.000016736136,0.00028426477,0.000010193068,0.00004121683,0.000010823431,0.0000755223,0.0000142452545,0.000029683793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99925685,0.00020327566,0.00021571202,0.00014663559,0.000009938691,0.00016760587],"domain_scores_gemma":[0.99949527,0.00007954314,0.00010978221,0.00017176657,0.00013207542,0.000011545969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027943443,0.00011516585,0.00024001335,0.00008504918,0.00011851794,0.000015311689,0.000082608385,0.0001919873,0.0001514302],"category_scores_gemma":[0.000053950545,0.00010119956,0.000060352126,0.00019658882,0.000031415944,0.00014947224,0.000038239785,0.00012786961,0.000038043272],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003510027,0.0000846647,0.0053234184,0.000051307015,0.00010760869,6.234613e-7,0.00010473451,0.0004260367,0.9913453,0.0016746667,0.0000082684155,0.0005223695],"study_design_scores_gemma":[0.0053935847,0.00026040836,0.06748033,0.00016773926,0.00005909309,0.000064308246,0.00006965006,0.000014978599,0.92500347,0.0006148792,0.0007266234,0.00014495544],"about_ca_topic_score_codex":0.00060660206,"about_ca_topic_score_gemma":0.000013171911,"teacher_disagreement_score":0.06634185,"about_ca_system_score_codex":0.000052048694,"about_ca_system_score_gemma":0.000037197067,"threshold_uncertainty_score":0.41267985},"labels":[],"label_agreement":null},{"id":"W2091866722","doi":"10.1111/j.1574-6968.2011.02464.x","title":"Decoding the roles of pilotins and accessory proteins in secretin escort services","year":2011,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; McMaster University; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Secretin; Biology; Cell biology; Membrane; Bacterial outer membrane; Flagellum; Bacteria; Biochemistry; Gene; Genetics; Escherichia coli; Secretion","score_opus":0.030823795224154824,"score_gpt":0.2696674487979842,"score_spread":0.2388436535738294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091866722","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15092582,0.84711933,0.000004561886,0.000103050996,0.00078877265,0.0008302445,0.00013565195,0.00003417992,0.000058394045],"genre_scores_gemma":[0.0063303076,0.99262303,0.000035650093,0.0001842299,0.00008519536,0.00015908811,0.00044258893,0.00004489235,0.00009502465],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976934,0.00062436785,0.0007638739,0.0004855515,0.0000053609424,0.00042739965],"domain_scores_gemma":[0.9987305,0.00021269264,0.00060763245,0.00040558554,0.000028887147,0.000014732845],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00037861167,0.00044998838,0.0013767612,0.00031364372,0.00015184717,0.000019058869,0.00053761847,0.0006813838,0.00023262984],"category_scores_gemma":[0.000018374525,0.00028733027,0.00022576153,0.00020268282,0.00039589152,0.00007531854,0.00031860397,0.000688139,0.00008460405],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010026144,0.00021411043,0.0024689706,0.007066667,0.0011865975,0.000006043032,0.0012743945,3.160273e-7,0.7026928,0.00030847813,0.0011188233,0.28356254],"study_design_scores_gemma":[0.0004151558,0.000087499466,0.00041816823,0.0031379922,0.00029388384,0.00037410864,0.00006590024,4.3518572e-8,0.0014695931,0.000007961399,0.9933777,0.00035199503],"about_ca_topic_score_codex":0.0004607881,"about_ca_topic_score_gemma":0.0010576503,"teacher_disagreement_score":0.99225885,"about_ca_system_score_codex":0.000031895433,"about_ca_system_score_gemma":0.000057042773,"threshold_uncertainty_score":0.99995786},"labels":[],"label_agreement":null},{"id":"W2091880795","doi":"10.1194/jlr.m800454-jlr200","title":"Structural characterization of Bordetella parapertussis lipid A","year":2008,"lang":"en","type":"article","venue":"Journal of Lipid Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Lipid A; Virulence factor; Bordetella pertussis; Chemistry; Acylation; Strain (injury); Bordetella; Biochemistry; Disaccharide; Stereochemistry; Bacteria; Virulence; Microbiology; Biology","score_opus":0.07078843549782467,"score_gpt":0.33976592952115403,"score_spread":0.2689774940233294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091880795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975349,0.00025185753,0.000014368351,0.0004399587,0.0014005092,0.00007867045,0.000009958376,0.000005843807,0.00026396834],"genre_scores_gemma":[0.99707484,0.0010238641,0.000030499492,0.00001106195,0.0006212326,0.0000017519744,0.000010829489,0.000009487361,0.0012164536],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987383,0.0003721758,0.00048525148,0.00009257015,0.000067283676,0.00024441807],"domain_scores_gemma":[0.9986612,0.00016063932,0.00025875293,0.00014385101,0.00074323337,0.00003229693],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006171296,0.000082941995,0.0002846863,0.00037597865,0.00023665452,0.000011630449,0.00019595005,0.00015198256,0.0012316847],"category_scores_gemma":[0.00020884904,0.00005828377,0.00012161993,0.0003284312,0.0001911726,0.0001718625,0.00005450951,0.0004666724,0.000043604305],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003220955,0.00007106556,0.012556807,0.000015187832,0.000091808506,0.0000026138914,0.00030024615,0.0000010856035,0.98181814,0.000043857784,0.0014642134,0.0033128718],"study_design_scores_gemma":[0.0016781983,0.0013497263,0.33957863,0.00009001633,0.000020443507,0.001687773,0.00012626646,0.0000084438525,0.52544737,0.000034460118,0.12984076,0.00013789517],"about_ca_topic_score_codex":0.00003092245,"about_ca_topic_score_gemma":0.0000025975087,"teacher_disagreement_score":0.45637077,"about_ca_system_score_codex":0.000027834903,"about_ca_system_score_gemma":0.00015283035,"threshold_uncertainty_score":0.99968135},"labels":[],"label_agreement":null},{"id":"W2092063101","doi":"10.1016/j.vaccine.2014.02.054","title":"Community, parental and adolescent awareness and knowledge of meningococcal disease","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Medical Research Council; National Health and Medical Research Council; GlaxoSmithKline","keywords":"Demography; Educational attainment; Quarter (Canadian coin); Medicine; Multivariate analysis; Metropolitan area; Disease; Young adult; Gerontology; Geography; Internal medicine","score_opus":0.017875870532454367,"score_gpt":0.2701667176444992,"score_spread":0.2522908471120448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092063101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979428,0.0013908785,0.0000410985,0.00013071689,0.00026655578,0.00007985149,0.000017607766,0.000025630945,0.000104867526],"genre_scores_gemma":[0.999608,0.000090968286,0.0000075972516,0.000018629653,0.000035512418,0.0000037351701,0.000046042613,0.0000068050454,0.00018274624],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994645,0.00019339085,0.00013818947,0.00009497936,0.00000374381,0.00010520937],"domain_scores_gemma":[0.9996742,0.00006114135,0.000044092874,0.00015393805,0.00003537743,0.00003124441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013662763,0.000090630725,0.00017643403,0.00005209382,0.00018854019,0.000007326003,0.000056312518,0.00005820214,0.00008213661],"category_scores_gemma":[0.000037039972,0.00007349969,0.000021244463,0.000047169142,0.00002520789,0.000038268045,0.00016066027,0.00012624025,0.000010176848],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000275767,0.00044646848,0.7733867,0.00016046854,0.000056095825,1.1574765e-7,0.00030869292,4.4034303e-7,0.21029496,0.00080301723,0.0022008272,0.012066427],"study_design_scores_gemma":[0.0016799988,0.00016865361,0.96119565,0.000068059075,0.000046597568,0.000018715045,0.00008618061,0.000016276663,0.009047828,0.00013302099,0.027438922,0.00010007046],"about_ca_topic_score_codex":0.00020067822,"about_ca_topic_score_gemma":0.00007545232,"teacher_disagreement_score":0.20124713,"about_ca_system_score_codex":0.00000475642,"about_ca_system_score_gemma":0.0000119092,"threshold_uncertainty_score":0.29972303},"labels":[],"label_agreement":null},{"id":"W2092091732","doi":"10.1016/j.vaccine.2009.02.055","title":"Analysis of mortality following a mass immunization campaign with serogroup C meningococcal conjugate vaccine: Methodological difficulties and imperfect solutions","year":2009,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Institut National de Santé Publique du Québec; Université Laval","funders":"","keywords":"Medicine; Vaccination; Meningococcal disease; Immunization; Population; Meningococcal vaccine; Demography; Conjugate vaccine; Cohort; Pediatrics; Immunology; Neisseria meningitidis; Environmental health; Internal medicine; Antigen","score_opus":0.034490477728710264,"score_gpt":0.29663667275028094,"score_spread":0.26214619502157066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092091732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898177,0.0009092536,0.008566507,0.00017444359,0.00015011826,0.00021983901,0.000024318257,0.00010007685,0.00003775288],"genre_scores_gemma":[0.99879324,0.00010734151,0.0006910253,0.000039988343,0.000026963135,0.000010261746,0.00024346173,0.000008949435,0.00007876455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986639,0.00032212853,0.0003996349,0.00030043154,0.000023465798,0.0002904529],"domain_scores_gemma":[0.9991909,0.00019880381,0.00018710962,0.0002850862,0.000112521564,0.000025552616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000540875,0.00021618906,0.00069476786,0.000285616,0.000275818,0.000025946958,0.00010219713,0.0001960884,0.00020354969],"category_scores_gemma":[0.000110563466,0.00014956134,0.00018184628,0.0008523334,0.00001748301,0.0001603773,0.000046138663,0.00017228475,0.000003804359],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003141607,0.00015669478,0.24515788,0.0000090609055,0.002461924,0.0000015000344,0.0001874509,0.0002457797,0.7498632,0.0006387379,0.00008035534,0.00088322745],"study_design_scores_gemma":[0.00196859,0.00067083124,0.9787891,0.000019693882,0.0024997394,0.00002198006,0.00020975042,0.00020002469,0.015033496,0.00006458531,0.00030130512,0.00022093863],"about_ca_topic_score_codex":0.00034022896,"about_ca_topic_score_gemma":0.0002369005,"teacher_disagreement_score":0.7348297,"about_ca_system_score_codex":0.000020950858,"about_ca_system_score_gemma":0.000016111937,"threshold_uncertainty_score":0.60989344},"labels":[],"label_agreement":null},{"id":"W2093278862","doi":"10.1016/j.vaccine.2013.09.043","title":"Evaluation of several approaches to immunize parents of neonates against B. pertussis","year":2013,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Bordetella pertussis; Whooping cough; Pertussis vaccine; Pediatrics; Virology; Immunology; Vaccination; Immunization; Biology; Antibody; Genetics; Bacteria","score_opus":0.07432372986342135,"score_gpt":0.2580342860250204,"score_spread":0.18371055616159904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093278862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99777675,0.0006621383,0.000037041435,0.00031127883,0.00034948075,0.00034700165,0.000016106957,0.00001779411,0.00048240952],"genre_scores_gemma":[0.9994082,0.000031460862,0.00011810529,0.000022250428,0.00002224807,0.000036596684,0.00009025255,0.000008402606,0.00026252188],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999259,0.00016307249,0.00028601088,0.00012870485,0.000028671373,0.00013453582],"domain_scores_gemma":[0.9993064,0.000041556606,0.00011163381,0.00022554508,0.00030080916,0.000014079582],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003389348,0.00009983738,0.00022985067,0.0001137768,0.000047941216,0.000005226154,0.00011209044,0.000097446085,0.0015900725],"category_scores_gemma":[0.00011003271,0.000076845565,0.000059079714,0.00016216288,0.000007779092,0.000091131704,0.00006315504,0.00006105679,0.00013330375],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008365621,0.00028108005,0.026197713,0.000023365734,0.00030469,2.0820433e-8,0.0005076959,0.00027911895,0.8940424,0.000119870034,0.0024343713,0.07572602],"study_design_scores_gemma":[0.0034186642,0.00037115725,0.6332924,0.0000683766,0.000219072,0.000008679578,0.0005589317,0.0005810585,0.3565186,0.00028991885,0.0044428925,0.00023026948],"about_ca_topic_score_codex":0.000639618,"about_ca_topic_score_gemma":0.000028311091,"teacher_disagreement_score":0.60709465,"about_ca_system_score_codex":0.0000200697,"about_ca_system_score_gemma":0.000031943055,"threshold_uncertainty_score":0.9993226},"labels":[],"label_agreement":null},{"id":"W2093487182","doi":"10.1086/518283","title":"Characterization of Invasive Haemophilus influenzae Disease in Manitoba, Canada, 2000-2006: Invasive Disease due to Non-Type B Strains","year":2007,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Haemophilus influenzae; Medicine; Disease; Incidence (geometry); Pasteurellaceae; Microbiology; Virology; Internal medicine; Biology; Antibiotics","score_opus":0.026410370064958114,"score_gpt":0.28900971483734816,"score_spread":0.26259934477239005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093487182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99437773,0.00025132296,0.00005220039,0.00021821224,0.002893108,0.0008940433,0.0011396017,0.00007692334,0.00009687395],"genre_scores_gemma":[0.997417,0.00012950209,0.0000020139812,0.0010256547,0.0003437318,0.000050361992,0.0008456293,0.00003802707,0.00014811831],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99736536,0.00025506178,0.0011867605,0.0005732669,0.00006484751,0.00055470114],"domain_scores_gemma":[0.9975747,0.0006971186,0.00035929357,0.00048683907,0.0003877262,0.0004943114],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029578232,0.00034608692,0.000672767,0.0003131853,0.00018319195,0.00003012179,0.00024158896,0.00022353871,0.00038470462],"category_scores_gemma":[0.002661799,0.00034110618,0.00021027385,0.0006381588,0.0002047678,0.00021803018,0.00015846263,0.00032189421,0.00013023459],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008162492,0.0012779675,0.9638208,0.00010918112,0.00014825958,0.00015337503,0.00006260237,0.00006493734,0.030755747,0.00009438323,0.0011207701,0.0015757034],"study_design_scores_gemma":[0.0015728322,0.00034962257,0.9929859,0.00017491318,0.0001678531,0.0000059369095,0.000047146397,0.0000018001513,0.0023245525,0.0001567541,0.001842189,0.00037051167],"about_ca_topic_score_codex":0.05374358,"about_ca_topic_score_gemma":0.48760512,"teacher_disagreement_score":0.43386155,"about_ca_system_score_codex":0.0002556645,"about_ca_system_score_gemma":0.0024209914,"threshold_uncertainty_score":0.9999041},"labels":[],"label_agreement":null},{"id":"W2093755865","doi":"10.1002/ebch.104","title":"Summary of ‘Conjugate vaccines for preventing meningococcal C meningitis and septicaemia’","year":2007,"lang":"en","type":"article","venue":"Evidence-Based Child Health A Cochrane Review Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Meningococcal meningitis; Systematic review; Cochrane collaboration; Conjugate; Meningitis; Intensive care medicine; Pediatrics; Family medicine; Alternative medicine; Cochrane Library; MEDLINE; Pathology; Political science; Neisseria meningitidis; Law","score_opus":0.03191065192935811,"score_gpt":0.34874700126840796,"score_spread":0.31683634933904986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093755865","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09280699,0.89025533,0.0026504945,0.012154978,0.0008530012,0.0011282783,0.000022553138,0.0000391093,0.00008923554],"genre_scores_gemma":[0.35493442,0.6384928,0.002646459,0.002787539,0.0007602522,0.000043728276,0.00005455313,0.000052022733,0.0002282199],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740994,0.00034348032,0.0013499251,0.00026942685,0.000049267644,0.00057793554],"domain_scores_gemma":[0.9974344,0.00095719297,0.0009558278,0.00021078275,0.00030954782,0.00013226042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0049227215,0.0002385842,0.00090757175,0.00018397415,0.00063618674,0.000025367197,0.00016786816,0.00013234616,0.00030919124],"category_scores_gemma":[0.00088871084,0.0001907808,0.00027681974,0.00022027959,0.00007105147,0.00023827064,0.000040449413,0.0004792959,0.0000074738764],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00272228,0.00075653783,0.024646316,0.06541573,0.001041231,0.00001916278,0.0005748466,0.000017286819,0.15466212,0.0014221666,0.06272114,0.6860012],"study_design_scores_gemma":[0.0125053525,0.0063295607,0.036557596,0.40483052,0.001206618,0.007884961,0.000167191,0.000033583212,0.04642249,0.0003912293,0.4822814,0.0013895209],"about_ca_topic_score_codex":0.00004929565,"about_ca_topic_score_gemma":0.000035782567,"teacher_disagreement_score":0.6846117,"about_ca_system_score_codex":0.00006480424,"about_ca_system_score_gemma":0.00029505906,"threshold_uncertainty_score":0.7779816},"labels":[],"label_agreement":null},{"id":"W2094351277","doi":"10.1016/j.vaccine.2012.04.034","title":"Evaluation of meningococcal serogroup C conjugate vaccine programs in Canadian children: Interim analysis","year":2012,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Alberta Children's Hospital; University of Calgary; Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"Michael Smith Health Research BC; Canadian Institutes of Health Research; Alberta Innovates - Health Solutions","keywords":"Medicine; Toxoid; Tetanus; Conjugate vaccine; Vaccination; Immunization; Meningococcal vaccine; Pediatrics; Titer; Vial; Immunology; Antibody","score_opus":0.03386105930469922,"score_gpt":0.2900447762642257,"score_spread":0.25618371695952646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094351277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99714285,0.0015148264,0.0000136528015,0.00014500886,0.00047084974,0.00043166208,0.00001938802,0.000030200741,0.00023158955],"genre_scores_gemma":[0.99921787,0.000027560896,0.000029717867,0.00002057511,0.0000790126,0.00003800974,0.0005206238,0.00001266235,0.000053992324],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99857056,0.00028587403,0.00042049747,0.00019536172,0.000032956115,0.0004947617],"domain_scores_gemma":[0.9992892,0.000021173428,0.00013587429,0.00026433764,0.00021727734,0.00007209823],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001487189,0.00016339477,0.0003947156,0.00063158426,0.00006962398,0.000011340037,0.000120381825,0.00018429029,0.0023044334],"category_scores_gemma":[0.00007204762,0.00014136161,0.000113444556,0.00090376724,0.000007202045,0.00016990174,0.000040518236,0.00015670614,0.0000820579],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055621837,0.00023031048,0.9526187,0.0000038642706,0.0008669651,9.364775e-8,0.00025306232,0.000027032704,0.032003,0.000106138825,0.00013052618,0.013704657],"study_design_scores_gemma":[0.0022053577,0.0001700832,0.9846389,0.000015877802,0.0010495383,0.00001929208,0.000060446535,0.00008332725,0.008236661,0.000014462333,0.003350305,0.00015571676],"about_ca_topic_score_codex":0.20197827,"about_ca_topic_score_gemma":0.34367493,"teacher_disagreement_score":0.14169665,"about_ca_system_score_codex":0.00013749696,"about_ca_system_score_gemma":0.00008904789,"threshold_uncertainty_score":0.9986076},"labels":[],"label_agreement":null},{"id":"W2094450737","doi":"10.1542/peds.112.2.405","title":"The Science and Fiction of the “Resurgence” of Pertussis","year":2003,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Bordetella pertussis; Pediatrics; Pertussis vaccine; Whooping cough; Demography; Vaccination; Immunology; Immunization","score_opus":0.010593666881442542,"score_gpt":0.2242572663458427,"score_spread":0.21366359946440017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094450737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961092,0.0014308208,0.000009445001,0.00009231471,0.0012042326,0.000046510188,0.000004109814,0.0000034388142,0.0010999142],"genre_scores_gemma":[0.9990002,0.00077048276,0.0000071745912,0.0000043147866,0.000014945866,0.0000016821241,2.108078e-7,0.0000012952664,0.00019972719],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997058,0.000044618933,0.00010235319,0.000057134566,0.00001485515,0.00007524733],"domain_scores_gemma":[0.9995632,0.00011564717,0.0000732443,0.00011742324,0.00012604066,0.0000044104004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038550067,0.00002953619,0.00004825704,0.000030982555,0.0002840865,0.0000052817404,0.00007691831,0.000034699868,0.000026491714],"category_scores_gemma":[0.00055241585,0.000014700878,0.000019806648,0.00032935018,0.00023663347,0.000031038235,0.00002791542,0.000046349345,0.0000016321998],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025339852,0.00007795512,0.19398986,0.000022150407,0.000017739783,2.0928596e-8,0.0003647497,0.0000045741735,0.7765244,0.016709462,0.005728804,0.0065348977],"study_design_scores_gemma":[0.00048343535,0.00012385687,0.44651914,0.0000060107377,0.00009330751,0.000032131913,0.00044887402,0.0000060589996,0.37363568,0.0005402473,0.17799078,0.00012048968],"about_ca_topic_score_codex":0.000045181627,"about_ca_topic_score_gemma":0.0000059113117,"teacher_disagreement_score":0.40288877,"about_ca_system_score_codex":0.0000056590206,"about_ca_system_score_gemma":0.000073045696,"threshold_uncertainty_score":0.21849924},"labels":[],"label_agreement":null},{"id":"W2097785287","doi":"10.1111/j.1365-2958.2006.05213.x","title":"Loss of both Holliday junction processing pathways is synthetically lethal in the presence of gonococcal pilin antigenic variation","year":2006,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Pilin; Biology; Holliday junction; Antigenic variation; Transposable element; Homologous recombination; Neisseria gonorrhoeae; Genetics; Gene conversion; Mutant; Pilus; Gene; Recombination; Virulence","score_opus":0.007949523936673206,"score_gpt":0.21787295273803042,"score_spread":0.20992342880135723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097785287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939228,0.0009166708,0.0041528144,0.0001943772,0.00029190592,0.0002455167,0.000038604165,0.0000149942025,0.00022226173],"genre_scores_gemma":[0.99962485,0.000016805228,0.00012879909,0.00004937052,0.000021926657,0.000015582897,0.00009128222,0.000009818074,0.000041569918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863076,0.00041984703,0.00044986233,0.0002528161,0.000008612231,0.0002380986],"domain_scores_gemma":[0.9993705,0.00008499035,0.0002102281,0.00023574331,0.000093217015,0.0000052794308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000371567,0.00014115793,0.0002779838,0.00011909334,0.00006630421,0.000007984871,0.00019479149,0.0003045049,0.00011664657],"category_scores_gemma":[0.00004626752,0.00010542706,0.000098653494,0.00022679965,0.0002450576,0.000047433503,0.000047934856,0.00018749606,0.00001685152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009061363,0.0002525565,0.0025260777,0.000028092169,0.00002676557,0.0000014068829,0.00026872713,0.00002829567,0.9945932,0.0014335946,0.00010030245,0.000650361],"study_design_scores_gemma":[0.000930874,0.0002881343,0.03812367,0.000050010312,0.00005281185,0.0002651965,0.00005442775,0.000015783227,0.95467854,0.0005610874,0.0048168176,0.00016262621],"about_ca_topic_score_codex":0.0005322845,"about_ca_topic_score_gemma":0.00004853127,"teacher_disagreement_score":0.03991465,"about_ca_system_score_codex":0.000015819141,"about_ca_system_score_gemma":0.00005797612,"threshold_uncertainty_score":0.4299191},"labels":[],"label_agreement":null},{"id":"W2098314369","doi":"10.1051/medsci/200319101011","title":"Santé publique : le contrôle des maladies méningococciques au Québec","year":2003,"lang":"fr","type":"review","venue":"médecine/sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Université Laval","funders":"","keywords":"Outbreak; Mass vaccination; Meningococcal disease; Epidemiology; Conjugate vaccine; Vaccination; Disease control; Medicine; Immunization; Geography; Public health; Neisseria meningitidis; Environmental health; Virology; Biology; Immunology; Antigen","score_opus":0.046792904403845016,"score_gpt":0.31977085837327734,"score_spread":0.2729779539694323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098314369","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04634788,0.92034656,0.00015621094,0.0009523662,0.003964471,0.00071574876,0.00008907073,0.00014036665,0.027287332],"genre_scores_gemma":[0.015161398,0.9545548,0.00048656904,0.00027914956,0.00065590045,0.00023832008,0.00006466203,0.000061286104,0.028497895],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99483347,0.0015220947,0.001182195,0.0010903949,0.00005853752,0.0013132925],"domain_scores_gemma":[0.99744225,0.0010490959,0.0006774217,0.00046100296,0.00026494687,0.00010528316],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["sts","insufficient_payload"],"category_scores_codex":[0.0018179956,0.00089371647,0.0020235272,0.00052114495,0.0032878516,0.0003044945,0.0009086741,0.0009849056,0.005366262],"category_scores_gemma":[0.000654788,0.00067989563,0.0006396536,0.0010471658,0.0039575435,0.00063865,0.000254006,0.00068568223,0.0009168295],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007600911,0.0019201904,0.0757318,0.0078393575,0.0017819242,0.000017296472,0.001363357,0.000015336544,0.0063674287,0.12198727,0.029614521,0.7532855],"study_design_scores_gemma":[0.0007316269,0.0008140483,0.0050834455,0.0034611202,0.00032707021,0.00064184057,0.0003431603,0.0000012671278,0.0004738787,0.0009297097,0.9864195,0.00077331276],"about_ca_topic_score_codex":0.103779964,"about_ca_topic_score_gemma":0.08686634,"teacher_disagreement_score":0.956805,"about_ca_system_score_codex":0.00042360186,"about_ca_system_score_gemma":0.0058036665,"threshold_uncertainty_score":0.99986106},"labels":[],"label_agreement":null},{"id":"W2098602111","doi":"10.1128/iai.00033-09","title":"Identification of a Novel Lipopolysaccharide Core Biosynthesis Gene Cluster in <i>Bordetella pertussis</i> , and Influence of Core Structure and Lipid A Glucosamine Substitution on Endotoxic Activity","year":2009,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Lipid A; Biology; Lipopolysaccharide; Glucosamine; Glycosyltransferase; Oligosaccharide; Gene cluster; Gene; Biosynthesis; Bacterial outer membrane; Bordetella pertussis; Biochemistry; Mutant; Bacteria; Genetics; Immunology","score_opus":0.018086830433778324,"score_gpt":0.25886386800859906,"score_spread":0.24077703757482075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098602111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991936,0.00018309402,0.0001029239,0.00005705554,0.00015731067,0.00022072133,0.00005850754,0.000018150171,0.000008615074],"genre_scores_gemma":[0.9991691,0.00072479097,0.000013578631,0.000033648423,0.000014034211,0.000004845217,0.000023238976,0.0000045957186,0.000012160621],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993034,0.00008708192,0.00029889317,0.00018056166,0.000018181967,0.000111852125],"domain_scores_gemma":[0.99936205,0.00012028716,0.0002256853,0.00017597358,0.00009885803,0.000017136981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002020602,0.00014039823,0.00026987056,0.0002252131,0.00014104536,0.000014863071,0.00003832185,0.00020179372,0.000014704885],"category_scores_gemma":[0.00022032087,0.00012272297,0.00003102762,0.00016166738,0.00016991368,0.00019430793,0.000032972457,0.00020687295,5.626959e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031210965,0.0002446712,0.025300996,0.00003540959,0.000025327075,5.767302e-8,0.00015824843,0.000024789537,0.96464735,0.00025261063,0.0000014747478,0.008996954],"study_design_scores_gemma":[0.00072927517,0.0002009987,0.47871554,0.00003935145,0.000020186782,0.000038702885,0.000010366132,0.000051691703,0.52003,0.00004596126,0.000051369825,0.00006652348],"about_ca_topic_score_codex":0.0013596397,"about_ca_topic_score_gemma":0.0002961352,"teacher_disagreement_score":0.45341453,"about_ca_system_score_codex":0.000022394854,"about_ca_system_score_gemma":0.000019547751,"threshold_uncertainty_score":0.5004497},"labels":[],"label_agreement":null},{"id":"W2099484936","doi":"10.1128/iai.68.1.239-246.2000","title":"Murine Immune Response to<i>Neisseria meningitidis</i>Group C Capsular Polysaccharide: Analysis of Monoclonal Antibodies Generated in Response to a Thymus-Independent Antigen and a Thymus-Dependent Toxoid Conjugate Vaccine","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Isotype; Toxoid; Biology; Monoclonal antibody; Antigen; Molecular biology; Antibody; Conjugate vaccine; Neisseria meningitidis; Immune system; Immunoglobulin G; Humoral immunity; Microbiology; Immunogenicity; Virology; Immunology; Immunization","score_opus":0.010445808193567744,"score_gpt":0.25715732496115645,"score_spread":0.2467115167675887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099484936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99695826,0.0015709437,0.000052421932,0.00034628567,0.00032942486,0.00050600583,0.00012134176,0.00008021255,0.000035130895],"genre_scores_gemma":[0.9974845,0.0017238109,0.000043304735,0.000099780744,0.000020218245,0.000052097243,0.0000903777,0.000023414108,0.00046249563],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969867,0.0013163825,0.00077326904,0.0004686087,0.00004517821,0.0004098466],"domain_scores_gemma":[0.99888885,0.00021464705,0.00016435448,0.00047882687,0.0001594271,0.000093903625],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017350673,0.00034878662,0.0007942213,0.0012728141,0.00040046978,0.00007728551,0.00013714413,0.00025677774,0.0013938618],"category_scores_gemma":[0.00021405278,0.00032907413,0.00014083236,0.0012939288,0.00006791414,0.00023130886,0.00019220104,0.00036075377,0.000038489918],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014914656,0.00032658773,0.04455868,0.000010653117,0.000795277,0.000004771891,0.0011636345,0.00027412406,0.9347138,0.00001607639,0.000019899691,0.0032018502],"study_design_scores_gemma":[0.0022727444,0.0009343011,0.8413418,0.000046871315,0.00022061012,0.00009397493,0.00019478948,0.000058519036,0.15115769,0.000012073048,0.0033543068,0.00031231422],"about_ca_topic_score_codex":0.015651252,"about_ca_topic_score_gemma":0.0024530801,"teacher_disagreement_score":0.79678315,"about_ca_system_score_codex":0.00007688,"about_ca_system_score_gemma":0.000056068027,"threshold_uncertainty_score":0.99991614},"labels":[],"label_agreement":null},{"id":"W2099780631","doi":"10.1517/14712598.6.7.685","title":"Pertussis immunisation in adolescents and adults –<i>Bordetella pertussis</i>epidemiology should guide vaccination recommendations","year":2006,"lang":"en","type":"review","venue":"Expert Opinion on Biological Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Bordetella pertussis; Whooping cough; Pediatrics; Vaccination; Booster dose; Pertussis vaccine; Diphtheria; Immunology; Immunization; Immune system","score_opus":0.17963763364229834,"score_gpt":0.4204783383208303,"score_spread":0.24084070467853197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099780631","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007153288,0.9940444,0.000043538465,0.0010155577,0.00257739,0.0011178285,0.00007327426,0.000135062,0.00027758317],"genre_scores_gemma":[0.0018599917,0.99362236,0.000087562614,0.00064034463,0.00034751234,0.00046265728,0.0028377636,0.000046004985,0.000095786934],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99456775,0.0024962863,0.0014296812,0.00094562286,0.000026831667,0.00053380476],"domain_scores_gemma":[0.99792665,0.00089547795,0.0005712866,0.00048069312,0.00007983333,0.000046064666],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00078618404,0.0007014782,0.0018078082,0.00045724396,0.00034295957,0.0000304775,0.0003296547,0.0017721751,0.0006928108],"category_scores_gemma":[0.00035557532,0.00045501516,0.00040722633,0.000338329,0.00011402924,0.000097995224,0.000109749024,0.0007764276,0.00011903003],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017776352,0.0004602954,0.00032811705,0.000067823,0.00008081066,2.976779e-7,0.000057175363,3.463551e-7,0.00016996282,0.0003672716,0.004853345,0.9934368],"study_design_scores_gemma":[0.0014023602,0.00063629664,0.0041861376,0.0025969113,0.0000030032895,0.00003392152,0.00003887437,0.0000029951113,0.000021668418,0.00008952927,0.9904789,0.00050940324],"about_ca_topic_score_codex":0.00054170884,"about_ca_topic_score_gemma":0.000027277327,"teacher_disagreement_score":0.9929274,"about_ca_system_score_codex":0.000190805,"about_ca_system_score_gemma":0.0000622733,"threshold_uncertainty_score":0.99979013},"labels":[],"label_agreement":null},{"id":"W2099871431","doi":"10.1128/jcm.42.4.1460-1465.2004","title":"Phenotypic and Genetic Characterization of a Unique Variant of Serogroup C ET-15 Meningococci (with the Antigenic Formula C:2a:P1.7,1) Causing Invasive Meningococcal Disease in Quebec, Canada","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Health Canada","funders":"Health Canada","keywords":"Neisseria meningitidis; Serotype; Meningococcal disease; Neisseriaceae; Virology; Antigen; Biology; Outbreak; Microbiology; Neisseria; Meningococcal vaccine; Genetics; Antibiotics; Bacteria","score_opus":0.015298380734949883,"score_gpt":0.2718527977420839,"score_spread":0.256554417007134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099871431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99686986,0.00040956214,0.0006469437,0.0013695856,0.0004290165,0.00023096355,0.00003718531,0.0000033359922,0.0000035161715],"genre_scores_gemma":[0.99915004,0.00033386014,0.00016951007,0.00020975222,0.000058561673,0.0000035802173,0.000033116317,0.000012156059,0.000029434465],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99781924,0.0005373311,0.0012314138,0.0001772401,0.000015552792,0.00021921608],"domain_scores_gemma":[0.9979154,0.00048187058,0.001174607,0.00016377147,0.00021709409,0.000047294845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005252371,0.0001640807,0.00068597036,0.00011549502,0.00006265666,0.000008945114,0.00014492232,0.00021593642,0.000042748277],"category_scores_gemma":[0.00021365783,0.000102217055,0.000108110005,0.0001607192,0.0002628898,0.00010112501,0.000074179596,0.00042986515,5.0551154e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010781335,0.00019717314,0.038389172,0.000034535205,0.0002425764,0.000024031808,0.00025825883,0.000093221584,0.9588886,0.00020833954,0.000029930394,0.000556035],"study_design_scores_gemma":[0.0063343616,0.001162049,0.92717016,0.00040302955,0.0002570327,0.0008607857,0.000142177,0.000003256323,0.05967654,0.00016113164,0.0035841106,0.0002453889],"about_ca_topic_score_codex":0.057139393,"about_ca_topic_score_gemma":0.39948916,"teacher_disagreement_score":0.89921206,"about_ca_system_score_codex":0.00005123335,"about_ca_system_score_gemma":0.0013267183,"threshold_uncertainty_score":0.9491392},"labels":[],"label_agreement":null},{"id":"W2100357361","doi":"10.1086/427875","title":"Rapid and Fatal Meningococcal Disease Due to a Strain of Neisseria meningitidis Containing the Capsule Null Locus","year":2005,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Fraser Health; BC Centre for Disease Control; Health Canada; Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Neisseria meningitidis; Serotype; Microbiology; Locus (genetics); Meningococcal disease; Typing; Virology; Serology; Neisseriaceae; Biology; 16S ribosomal RNA; Polymerase chain reaction; Ribosomal RNA; Gene; Medicine; Antibody; Bacteria; Genetics; Antibiotics","score_opus":0.024681728095739888,"score_gpt":0.310787645416936,"score_spread":0.2861059173211961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100357361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99477863,0.002582485,0.00010152299,0.0007383489,0.0006981122,0.00040595714,0.00037284652,0.00011928758,0.00020278007],"genre_scores_gemma":[0.9989009,0.0001316327,0.00000949921,0.00033499845,0.00033727652,0.0000735724,0.00008167222,0.000021629327,0.00010880298],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.998307,0.0003432569,0.000627476,0.0003743901,0.000021269767,0.00032659486],"domain_scores_gemma":[0.9986442,0.0005538421,0.0001781012,0.00033546827,0.00010150855,0.00018687731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003308335,0.00022016,0.0004709063,0.00007607428,0.00028535735,0.000041777217,0.00015072039,0.00014305957,0.0008032977],"category_scores_gemma":[0.00087784434,0.00016003277,0.00021900964,0.00015681297,0.00034490167,0.00013340499,0.00015799067,0.00024095557,0.000099876226],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025918626,0.0043868492,0.34650806,0.00016047548,0.0019698325,0.000024070772,0.0013178834,0.00018515969,0.21668282,0.008045944,0.013189462,0.40493757],"study_design_scores_gemma":[0.0038569036,0.0016812108,0.94716185,0.00009939521,0.00048520137,0.00006218273,0.00034978642,0.000036567544,0.0024359715,0.000534427,0.04280932,0.00048715548],"about_ca_topic_score_codex":0.00010287968,"about_ca_topic_score_gemma":0.00008933352,"teacher_disagreement_score":0.6006538,"about_ca_system_score_codex":0.000021957934,"about_ca_system_score_gemma":0.00009428081,"threshold_uncertainty_score":0.87955457},"labels":[],"label_agreement":null},{"id":"W2100400555","doi":"10.1086/320754","title":"Pertussis Is a Frequent Cause of Prolonged Cough Illness in Adults and Adolescents","year":2001,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":244,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Dalhousie University","funders":"","keywords":"Medicine; Bordetella pertussis; Whooping cough; Vomiting; Pediatrics; Internal medicine; Immunology; Vaccination","score_opus":0.021697217770687262,"score_gpt":0.31408241070896975,"score_spread":0.29238519293828247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100400555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99710834,0.0013233396,0.000006457375,0.00014143846,0.00088094454,0.00029990647,0.000069701324,0.00006385816,0.00010598721],"genre_scores_gemma":[0.9976224,0.001894428,9.2370027e-7,0.00021425122,0.00007454188,0.000044308337,0.00002733292,0.0000128667125,0.000108956665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986442,0.00023001955,0.00055751094,0.00032275126,0.000016697077,0.00022884402],"domain_scores_gemma":[0.9992818,0.00017453494,0.00016259967,0.00022955473,0.00009480911,0.00005670687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013618523,0.00015677158,0.00041504588,0.00010088393,0.0000956078,0.000012143753,0.00007589916,0.00024211194,0.00044892522],"category_scores_gemma":[0.00037158167,0.00013017886,0.00012906462,0.00018118045,0.00024408521,0.00009563322,0.00007008175,0.00020640777,0.000061654966],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038288973,0.0015154363,0.98847026,0.00006687043,0.00010161588,0.000005701541,0.00012516997,6.8743424e-7,0.0006322922,0.00003173919,0.00073455647,0.007932795],"study_design_scores_gemma":[0.003542177,0.00041266173,0.99167866,0.0002524869,0.000091635025,0.000025409408,0.000055236753,0.0000049528276,0.00024831493,0.00015398754,0.0033640796,0.00017041352],"about_ca_topic_score_codex":0.00043959857,"about_ca_topic_score_gemma":0.00041771145,"teacher_disagreement_score":0.007762382,"about_ca_system_score_codex":0.000020364148,"about_ca_system_score_gemma":0.000048506365,"threshold_uncertainty_score":0.5308539},"labels":[],"label_agreement":null},{"id":"W2100431291","doi":"10.1097/inf.0b013e318199d2fc","title":"Epidemiology of Pertussis and Haemophilus influenzae type b Disease in Canada With Exclusive Use of a Diphtheria-Tetanus-Acellular Pertussis-Inactivated Poliovirus-Haemophilus influenzae type b Pediatric Combination Vaccine and an Adolescent-Adult Tetanus-Diphtheria-Acellular Pertussis Vaccine","year":2009,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; Dalhousie University; Government of Northwest Territories; University of British Columbia; BC Children's Hospital","funders":"","keywords":"Medicine; Hib vaccine; Pediatrics; Diphtheria; Vaccination; Epidemiology; Incidence (geometry); Whooping cough; Herd immunity; Immunization; Tetanus; Conjugate vaccine; Disease; Poliomyelitis; Haemophilus influenzae; Immunology; Internal medicine; Microbiology; Antibody; Antibiotics; Biology","score_opus":0.017617567230744025,"score_gpt":0.2466175250287205,"score_spread":0.22899995779797647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100431291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845782,0.012855136,0.000032038133,0.00085107505,0.0007211262,0.00076787325,0.00013292018,0.000052404655,0.000009240798],"genre_scores_gemma":[0.99168414,0.007174429,0.000027706254,0.0004554156,0.00046403645,0.000016422895,0.0000690946,0.00006563278,0.00004314346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9957238,0.0013478667,0.0013693792,0.0006259837,0.00014652949,0.00078647933],"domain_scores_gemma":[0.9962426,0.00060050376,0.0012811904,0.0006530305,0.00076704123,0.00045567044],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005460877,0.0006838481,0.0012214527,0.00075301755,0.0005851595,0.00004544306,0.0003186789,0.0002875164,0.00019421871],"category_scores_gemma":[0.0013271567,0.0004768361,0.0001639607,0.0013364193,0.00012566187,0.00059670774,0.00014708067,0.00083075213,0.000003897003],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0060107675,0.0009236372,0.98424923,0.0001646226,0.00026304484,0.00006626687,0.00028589938,0.00075899315,0.00627982,0.00009733586,0.00021809546,0.00068230095],"study_design_scores_gemma":[0.0052933665,0.0015432732,0.9892938,0.00008130493,0.0014385611,0.0004463741,0.00015087862,0.00034563,0.00020739657,0.00044384185,0.00017205151,0.0005835168],"about_ca_topic_score_codex":0.04388083,"about_ca_topic_score_gemma":0.0077067134,"teacher_disagreement_score":0.03617412,"about_ca_system_score_codex":0.00032486327,"about_ca_system_score_gemma":0.0013596037,"threshold_uncertainty_score":0.9997683},"labels":[],"label_agreement":null},{"id":"W2101006618","doi":"10.1093/glycob/cwp117","title":"Phosphoethanolamine is located at the 6-position and not at the 7-position of the distal heptose residue in the lipopolysaccharide from Neisseria meningitidis","year":2009,"lang":"en","type":"article","venue":"Glycobiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Heptose; Residue (chemistry); Neisseria meningitidis; Chemistry; Strain (injury); Transferase; Lipopolysaccharide; Microbiology; Neisseria; Stereochemistry; Biochemistry; Gene; Biology; Bacteria; Enzyme; Genetics; Mutant","score_opus":0.008137069576328614,"score_gpt":0.22491548301547282,"score_spread":0.2167784134391442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101006618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852191,0.0018037008,0.000007877015,0.011491205,0.00068123,0.00038328647,0.00023639182,0.000019617237,0.00015756433],"genre_scores_gemma":[0.9976772,0.00021122911,0.0000022775205,0.0011259387,0.0000791361,0.00003300673,0.00033184318,0.000008354111,0.000530994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985359,0.0005661641,0.00032871333,0.0002815242,0.000018469034,0.00026927714],"domain_scores_gemma":[0.9989273,0.00033793456,0.00019611773,0.00048343753,0.00004571958,0.00000950211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028908663,0.00019059629,0.00024009678,0.000033975623,0.0005704727,0.000020088855,0.0003019694,0.00027219625,0.00043611397],"category_scores_gemma":[0.00004674031,0.00008380467,0.00009298649,0.00016708151,0.00040382348,0.000058389876,0.0001686099,0.00028383662,0.00005160987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066109374,0.000058713005,0.0039406964,0.0000024294973,0.00006431293,6.8360646e-7,0.0010687611,0.0000019679053,0.98992795,0.0005640216,0.0023184752,0.0013908963],"study_design_scores_gemma":[0.000801481,0.0002770336,0.17339061,0.000021632002,0.00007630479,0.00019126668,0.0002459299,0.000003878404,0.82079077,0.00051143614,0.0035795611,0.000110120505],"about_ca_topic_score_codex":0.0029826143,"about_ca_topic_score_gemma":0.0028008712,"teacher_disagreement_score":0.16944991,"about_ca_system_score_codex":0.000056339544,"about_ca_system_score_gemma":0.000021876354,"threshold_uncertainty_score":0.47751424},"labels":[],"label_agreement":null},{"id":"W2102044733","doi":"10.1128/iai.72.11.6511-6518.2004","title":"Expression of Heterologous Antigens in Commensal <i>Neisseria</i> spp.: Preservation of Conformational Epitopes with Vaccine Potential","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"Imperial College London","keywords":"Neisseria meningitidis; Bacterial outer membrane; Microbiology; Neisseria; Heterologous; Biology; Antigen; Epitope; Meningococcal vaccine; Virology; Membrane protein; Recombinant DNA; Bacteria; Escherichia coli; Immunology; Gene; Membrane; Biochemistry","score_opus":0.00990183483515694,"score_gpt":0.23067176084464527,"score_spread":0.22076992600948833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102044733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99861664,0.000102745216,0.0006417062,0.00007691018,0.00025405685,0.00015375031,0.000014973965,0.000020028308,0.0001191658],"genre_scores_gemma":[0.99964076,0.0001328362,0.000051987856,0.00002066178,0.000011734891,0.00000752346,0.00011459445,0.000004660924,0.000015234384],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99939996,0.00010465984,0.00030175204,0.0000792886,0.000013067135,0.00010125014],"domain_scores_gemma":[0.9995461,0.000028928114,0.0001783362,0.00012114094,0.00011610803,0.000009349476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015248377,0.00009192134,0.0001990115,0.0001335846,0.000104637205,0.000006817437,0.000041418843,0.000121564655,0.00013106092],"category_scores_gemma":[0.000022542445,0.00007301694,0.000029120327,0.00012656026,0.00006126958,0.00029986442,0.00004090862,0.00015203764,0.0000037907914],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047599326,0.0002730228,0.087630875,0.000035870245,0.000029349292,1.17327524e-7,0.00023402579,0.00030339233,0.9103395,0.00020165999,0.00003092393,0.0004452754],"study_design_scores_gemma":[0.002441958,0.00048438815,0.5695769,0.000056617177,0.000011500791,0.00004964506,0.000052524367,0.0000049662167,0.42654896,0.0001278953,0.0005803988,0.000064210544],"about_ca_topic_score_codex":0.0032960097,"about_ca_topic_score_gemma":0.00035596217,"teacher_disagreement_score":0.48379052,"about_ca_system_score_codex":0.000012694745,"about_ca_system_score_gemma":0.000025428668,"threshold_uncertainty_score":0.49826026},"labels":[],"label_agreement":null},{"id":"W2102681112","doi":"10.1016/s1473-3099(08)70152-x","title":"Haemophilus influenzae type b conjugate vaccine use and effectiveness","year":2008,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":155,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Hib vaccine; Conjugate vaccine; Medicine; Vaccination; Developing country; Meningitis; Pneumonia; Disease burden; Pediatrics; Burden of disease; Haemophilus influenzae; Population; Developed country; Virology; Immunization; Environmental health; Immunology; Economic growth; Antibiotics; Microbiology; Internal medicine; Antigen; Biology","score_opus":0.050070706910874424,"score_gpt":0.31415682270926054,"score_spread":0.26408611579838615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102681112","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034375403,0.96198916,0.0000021871065,0.000017179977,0.0018754029,0.0009168977,0.00033956516,0.00037731754,0.000106893945],"genre_scores_gemma":[0.007923986,0.9907559,8.0220667e-7,0.00010920208,0.0005389514,0.00017544649,0.00031269793,0.00006694417,0.000116056915],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976849,0.0009856824,0.00041262244,0.00045101327,0.000021531727,0.00044426025],"domain_scores_gemma":[0.9976292,0.0012047442,0.00029684065,0.00068173703,0.00013834855,0.00004907543],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00013775226,0.0005583951,0.0020185858,0.00015893775,0.0005764261,0.0001113284,0.00024838568,0.0004049004,0.00016205061],"category_scores_gemma":[0.0003711078,0.00034014857,0.0003129558,0.0003651255,0.00018327551,0.00018474474,0.0002191616,0.0005371635,0.0004627693],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011063281,0.0010493239,0.043051925,0.018263223,0.008325832,0.000064508255,0.00016264588,0.000012843865,0.00033949138,0.00266023,0.048234314,0.8767293],"study_design_scores_gemma":[0.0011175688,0.00019682849,0.010772444,0.0017053541,0.0011757805,0.0012362639,0.0000016461436,1.2517948e-7,0.000008157507,0.00012179426,0.98325306,0.00041099163],"about_ca_topic_score_codex":0.00026120746,"about_ca_topic_score_gemma":0.000024055198,"teacher_disagreement_score":0.9350187,"about_ca_system_score_codex":0.00006627832,"about_ca_system_score_gemma":0.00014294816,"threshold_uncertainty_score":0.99990505},"labels":[],"label_agreement":null},{"id":"W2102726155","doi":"10.4049/jimmunol.1000105","title":"Inflammasome Activation by Adenylate Cyclase Toxin Directs Th17 Responses and Protection against <i>Bordetella pertussis</i>","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":163,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Bordetella pertussis; Pertussis toxin; Adenylate kinase; Cyclase; Inflammasome; Microbiology; Toxin; Adenylate Cyclase Toxin; Chemistry; Biology; G protein; Bacteria; Biochemistry; Enzyme; Signal transduction; Receptor; Genetics","score_opus":0.008312426393666984,"score_gpt":0.2218894800531429,"score_spread":0.21357705365947594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102726155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938369,0.0015267917,0.0000640499,0.0026053148,0.0016206122,0.0001736725,0.000006813266,0.000027513308,0.00013837608],"genre_scores_gemma":[0.99756104,0.0012908555,0.000020687747,0.0001039051,0.0001236586,0.0000068315853,0.0000047075096,0.000015217944,0.0008731047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987324,0.00051910424,0.00039657654,0.000109507906,0.00002061191,0.00022182782],"domain_scores_gemma":[0.9988483,0.00031488467,0.00044211664,0.00021202661,0.00016391443,0.000018728786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006523394,0.00015927976,0.0002614839,0.00016464523,0.00035390563,0.000027284452,0.00018321916,0.0003170419,0.00013439998],"category_scores_gemma":[0.0004084027,0.00010071271,0.00006381817,0.00012573977,0.00024296474,0.00022884674,0.00006771434,0.0009094206,0.000027423703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014913947,0.000057396624,0.00021711226,0.0000038913436,0.00017973366,8.4254174e-7,0.000250532,0.0000013478702,0.9784052,0.000046733036,0.0007533297,0.018592516],"study_design_scores_gemma":[0.0013270485,0.0005803658,0.015323526,0.000028662675,0.00005530028,0.0010559064,0.00014651648,0.0000021447104,0.8853073,0.00011865557,0.09592312,0.00013142565],"about_ca_topic_score_codex":0.00008096824,"about_ca_topic_score_gemma":0.000043203116,"teacher_disagreement_score":0.09516979,"about_ca_system_score_codex":0.000022121843,"about_ca_system_score_gemma":0.00005952591,"threshold_uncertainty_score":0.41069448},"labels":[],"label_agreement":null},{"id":"W2102982530","doi":"10.1128/aac.01580-07","title":"Antibiotic Susceptibility of Invasive <i>Haemophilus influenzae</i> Strains in Canada","year":2008,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Ampicillin; Haemophilus influenzae; Microbiology; Antibiotics; Amp resistance; Biology; Haemophilus; Bacteria; Genetics","score_opus":0.01702310904611777,"score_gpt":0.2277056107820008,"score_spread":0.21068250173588304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102982530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988542,0.00006061303,0.0000016435579,0.00037686306,0.00031679342,0.00016930416,0.000063404055,0.000010715797,0.00014641706],"genre_scores_gemma":[0.9974476,0.0011002135,0.000018239265,0.0012643168,0.000021137392,9.074401e-7,0.00003138793,0.0000115548955,0.00010465576],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99917084,0.000049851576,0.00030545093,0.00022570192,0.000014507153,0.00023367241],"domain_scores_gemma":[0.99964213,0.00002866285,0.0001002115,0.00016340375,0.000045449353,0.000020137133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000564845,0.00015089073,0.00031222843,0.000056806373,0.00009985172,0.0000046049627,0.0000968465,0.00010605151,0.00032072215],"category_scores_gemma":[0.000011284107,0.0001348821,0.00004625066,0.00013398648,0.00014019746,0.00006592482,0.000030953754,0.00012209994,0.000006184558],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006585765,0.00013505376,0.5375956,0.000027913575,0.00005475534,0.000004564565,0.0002757383,0.0000036163415,0.45369905,0.000014170559,0.0071282615,0.0009953751],"study_design_scores_gemma":[0.0018520717,0.00006951494,0.8101656,0.00003654263,0.0000073383253,0.00008269863,0.00007144151,7.1895465e-7,0.18249214,0.000009903992,0.0050598066,0.00015227096],"about_ca_topic_score_codex":0.54873323,"about_ca_topic_score_gemma":0.62126994,"teacher_disagreement_score":0.27256992,"about_ca_system_score_codex":0.00005573522,"about_ca_system_score_gemma":0.00034343076,"threshold_uncertainty_score":0.5500332},"labels":[],"label_agreement":null},{"id":"W2103122636","doi":"10.1128/jcm.42.2.867-870.2004","title":"Detection of the <i>Candida</i> Antigen Mannan in Cerebrospinal Fluid Specimens from Patients Suspected of Having <i>Candida</i> Meningitis","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Meningitis; Cerebrospinal fluid; Mannan; Candida infections; Microbiology; Antigen; Medicine; Immunology; Biology; Pathology; Candida albicans; Surgery","score_opus":0.015346881992244281,"score_gpt":0.2770883215665082,"score_spread":0.26174143957426393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103122636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949557,0.0005373879,0.0000689385,0.00016591321,0.003914149,0.00016248324,0.00011226097,0.000006786221,0.000076390665],"genre_scores_gemma":[0.99937516,0.00023248962,0.00010518289,0.000050108898,0.00017268145,0.0000012517844,0.000022815195,0.000013739524,0.000026578016],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99691916,0.00047633122,0.0020962262,0.00021755187,0.000021557695,0.00026914998],"domain_scores_gemma":[0.99741995,0.00030005944,0.0016691945,0.000246368,0.00033470712,0.000029746985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005586914,0.00018032956,0.0009001799,0.00015758122,0.000081407445,0.0000065101103,0.0003296174,0.00045418605,0.00018257064],"category_scores_gemma":[0.0003962539,0.0001242287,0.00041692308,0.0002460165,0.00033812452,0.00009386149,0.000120157616,0.00062579935,0.000011944962],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006666548,0.00045767316,0.19986719,0.0000058322166,0.00017042713,0.0000011804594,0.00008508553,0.000011471325,0.79770553,0.00002601997,0.00013157028,0.0008713899],"study_design_scores_gemma":[0.0048672645,0.0011539037,0.5261124,0.00015376607,0.00006199944,0.000085024105,0.00005079541,1.4399696e-7,0.46383965,0.00023795752,0.0033384354,0.00009865294],"about_ca_topic_score_codex":0.00070514804,"about_ca_topic_score_gemma":0.00069576787,"teacher_disagreement_score":0.33386585,"about_ca_system_score_codex":0.00005946729,"about_ca_system_score_gemma":0.00014475896,"threshold_uncertainty_score":0.50658995},"labels":[],"label_agreement":null},{"id":"W2103466062","doi":"10.1586/eri.13.42","title":"The burden and impact of severe and long-term sequelae of meningococcal disease","year":2013,"lang":"en","type":"review","venue":"Expert Review of Anti-infective Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Abbott (Canada)","funders":"National Institute for Health and Care Research","keywords":"Medicine; Meningococcal disease; Disease; Quality of life (healthcare); Intensive care medicine; Pediatrics; Case fatality rate; Vaccination; MEDLINE; Sequela; Neisseria meningitidis; Psychiatry; Epidemiology; Immunology; Internal medicine","score_opus":0.029832735364174107,"score_gpt":0.3677195568038385,"score_spread":0.3378868214396644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103466062","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03698652,0.96097016,0.0000035682501,0.000033695505,0.00024116063,0.0016156372,0.00010439347,0.000012956374,0.00003188238],"genre_scores_gemma":[0.00337676,0.9962022,0.000005386129,0.000009234011,0.00011683218,0.00012741721,0.00007812286,0.000034156656,0.00004990502],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99788845,0.00069665577,0.0008362589,0.0003193389,0.000029078205,0.00023020827],"domain_scores_gemma":[0.99782866,0.00046246542,0.0009468307,0.0004775037,0.00023874166,0.000045785844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037203028,0.000463235,0.0023903893,0.00010286621,0.00012346172,0.000014860043,0.0002069349,0.00024233168,0.00041340338],"category_scores_gemma":[0.000092089525,0.00023549607,0.00074703625,0.00018098744,0.00048397135,0.00010143056,0.00011739343,0.00024062343,0.000007701785],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048567144,0.00009246232,0.00082932843,0.015747888,0.0019149755,5.018188e-7,0.00012758486,2.543428e-8,0.005007532,0.000067875386,0.00060047716,0.9755628],"study_design_scores_gemma":[0.001457424,0.0013719896,0.01539411,0.079712905,0.0009246434,0.00026900411,0.000022257633,1.4195196e-7,0.0005286422,0.00004574005,0.8995555,0.000717627],"about_ca_topic_score_codex":0.00037484715,"about_ca_topic_score_gemma":0.0000020256161,"teacher_disagreement_score":0.9748452,"about_ca_system_score_codex":0.000033412372,"about_ca_system_score_gemma":0.0001880078,"threshold_uncertainty_score":0.9603251},"labels":[],"label_agreement":null},{"id":"W2105007232","doi":"10.1371/journal.pmed.1000249","title":"Accelerating Policy Decisions to Adopt Haemophilus influenzae Type b Vaccine: A Global, Multivariable Analysis","year":2010,"lang":"en","type":"article","venue":"PLoS Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Pan American Health Organization; McMaster University; World Health Organization; GAVI Alliance","keywords":"Hib vaccine; Medicine; Global health; Immunization; Environmental health; Vaccination; Public health; Economic growth; Immunology; Conjugate vaccine; Economics","score_opus":0.037127746766885995,"score_gpt":0.3232449869342801,"score_spread":0.2861172401673941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105007232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908546,0.00020344157,0.00017781067,0.0043052062,0.001482196,0.00026788525,0.0000350039,0.00014328891,0.002530561],"genre_scores_gemma":[0.9966687,0.00003083528,0.00082807033,0.0009332452,0.0006978691,0.000025609808,0.00011215349,0.000015973645,0.0006875327],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986809,0.00007066653,0.00045202536,0.00036116768,0.000038247337,0.00039698108],"domain_scores_gemma":[0.99863476,0.00025347894,0.00011772519,0.0005493157,0.00033581103,0.00010889667],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023024745,0.00022534243,0.00053916895,0.00044753306,0.00032174223,0.00002442678,0.00026972438,0.00026399197,0.0041494933],"category_scores_gemma":[0.003477777,0.00016572133,0.00008498712,0.0025344014,0.00004589489,0.00010319323,0.00015107487,0.00037208584,0.000593861],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014168097,0.00018156171,0.036448106,0.0000054179227,0.0009428624,0.0000020925297,0.000207092,0.000040969488,0.9452066,0.0018949936,0.01108818,0.0038404556],"study_design_scores_gemma":[0.007805958,0.0016135126,0.61558986,0.0002661048,0.0034214638,0.00022497264,0.00037627778,0.00025577596,0.037280273,0.0014517261,0.3305857,0.0011283577],"about_ca_topic_score_codex":0.003209107,"about_ca_topic_score_gemma":0.0014374398,"teacher_disagreement_score":0.9079263,"about_ca_system_score_codex":0.000045873985,"about_ca_system_score_gemma":0.00010330872,"threshold_uncertainty_score":0.99676085},"labels":[],"label_agreement":null},{"id":"W2105324903","doi":"10.1128/jb.00016-12","title":"Biogenesis of Outer Membrane Vesicles in Serratia marcescens Is Thermoregulated and Can Be Induced by Activation of the Rcs Phosphorelay System","year":2012,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Glycomics Centre; Alberta Heritage Foundation for Medical Research; Agencia Nacional de Promoción Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas; Fondation pour la Recherche Médicale; University of Alberta","keywords":"Serratia marcescens; Bacterial outer membrane; Biology; Biogenesis; Microbiology; Serratia; Galleria mellonella; Virulence; Bacteria; Enterobacteriaceae; Pathogenicity island; Vesicle; Cell biology; Escherichia coli; Salmonella; Biochemistry; Genetics; Membrane","score_opus":0.014202691282455469,"score_gpt":0.2231469157897264,"score_spread":0.20894422450727093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105324903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980584,0.00037662804,0.0000025220866,0.0006615781,0.0007435346,0.000098311975,0.000041725532,0.0000032654336,0.000014077067],"genre_scores_gemma":[0.9997791,0.0000655353,0.000011325388,0.000050482064,0.00004436286,0.0000017431546,0.000008571105,0.000008774714,0.000030086161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989161,0.00029219224,0.0005393838,0.000076084936,0.000016299251,0.00015997223],"domain_scores_gemma":[0.9990261,0.000072637544,0.0006466366,0.00013133192,0.000105383086,0.000017906603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028393033,0.00011205871,0.00040056396,0.00011364185,0.00004332202,0.0000035968346,0.00011355675,0.00026214143,0.00010090287],"category_scores_gemma":[0.000026544392,0.00006979731,0.00007624352,0.00013093915,0.00009735749,0.000097065546,0.000043888656,0.00016154464,6.7293405e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023322999,0.0000664964,0.04884462,0.000031285945,0.0001614918,1.2407726e-7,0.0008873819,4.6550818e-7,0.94876254,0.000042106178,0.00017255446,0.00079772354],"study_design_scores_gemma":[0.0005601269,0.00013272787,0.37263983,0.000057846537,0.000036708774,0.00011012107,0.00022506762,7.7927564e-7,0.62558645,0.0000026922999,0.0006017649,0.000045879107],"about_ca_topic_score_codex":0.00048277315,"about_ca_topic_score_gemma":0.000029490175,"teacher_disagreement_score":0.3237952,"about_ca_system_score_codex":0.000032308017,"about_ca_system_score_gemma":0.000037028145,"threshold_uncertainty_score":0.28462517},"labels":[],"label_agreement":null},{"id":"W2105380293","doi":"10.1074/jbc.m308364200","title":"Neisserial Lipooligosaccharide Is a Target for Complement Component C4b","year":2003,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Medical Research Council; Academy of Finland; Deutsche Forschungsgemeinschaft","keywords":"Chemistry; Pea protein; Heptose; Residue (chemistry); Amide; Neisseria meningitidis; Complement system; Classical complement pathway; Biology; Microbiology; Biochemistry; Stereochemistry; Gene; Bacteria; Antibody; Genetics; Mutant","score_opus":0.0358510831411319,"score_gpt":0.27665100195715003,"score_spread":0.24079991881601814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105380293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970412,0.00069897465,0.00043073655,0.0003374749,0.0009883496,0.00010001845,0.000060233706,0.000011919539,0.00033106122],"genre_scores_gemma":[0.99853915,0.000074196316,0.0007424185,0.000113452705,0.0002536378,0.0000081670705,0.00003856904,0.0000057667503,0.00022465913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990987,0.000054460565,0.0004727927,0.00013184828,0.00001381096,0.00022839406],"domain_scores_gemma":[0.99930894,0.00010563935,0.00030175195,0.000100282,0.00014486516,0.000038518596],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029274318,0.00013510931,0.00033460505,0.000019882616,0.00011485468,0.000016107691,0.0001423843,0.00021975806,0.0041622478],"category_scores_gemma":[0.00015837823,0.0000901127,0.00022382203,0.000046895555,0.0000560605,0.000033215554,0.000025765023,0.0001967698,0.000019183908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028240032,0.00020276573,0.0017138418,0.000013255326,0.00012660584,9.951929e-7,0.000016827924,0.0000014859856,0.9907305,0.00019745535,0.006516031,0.00019779683],"study_design_scores_gemma":[0.0012877525,0.0003369993,0.0006982066,0.000011812697,0.000020206247,0.00023792592,0.000045953955,5.0355453e-7,0.68263566,0.00077832915,0.31385386,0.000092796436],"about_ca_topic_score_codex":0.000003826142,"about_ca_topic_score_gemma":2.0085899e-7,"teacher_disagreement_score":0.3080949,"about_ca_system_score_codex":0.000032642074,"about_ca_system_score_gemma":0.000044726894,"threshold_uncertainty_score":0.9967481},"labels":[],"label_agreement":null},{"id":"W2106209372","doi":"10.1093/qjmed/hci047","title":"Delays in the administration of antibiotics are associated with mortality from adult acute bacterial meningitis","year":2005,"lang":"en","type":"article","venue":"QJM","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":459,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Medicine; Antibiotics; Meningitis; Case fatality rate; Odds ratio; Pediatrics; Retrospective cohort study; Lumbar puncture; Mortality rate; Internal medicine; Intensive care medicine; Epidemiology; Cerebrospinal fluid; Microbiology","score_opus":0.015024985192965171,"score_gpt":0.2531070438831017,"score_spread":0.23808205869013652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106209372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991421,0.0000309101,0.000010548971,0.00024876298,0.00015105329,0.00007776295,0.00019179085,0.000011988774,0.00013510011],"genre_scores_gemma":[0.9995527,0.000019875471,0.000031864645,0.000028420534,0.000043836615,7.623378e-7,0.00027963033,0.0000036222891,0.000039284772],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995873,0.0000854349,0.00014383638,0.000090469024,0.000009385207,0.00008357139],"domain_scores_gemma":[0.99970174,0.00005118599,0.00010486243,0.000095608666,0.000042147698,0.0000044705275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007354277,0.000062841435,0.00012282148,0.000018789742,0.000047243004,0.000011695692,0.000048821825,0.00010746242,0.00012575802],"category_scores_gemma":[0.000029405266,0.000041964573,0.000016933765,0.000057796988,0.000042846146,0.00005964889,0.000010402533,0.00008088946,0.000006378019],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004603147,0.00035814993,0.19717519,0.000004609103,0.00044755757,0.000004877512,0.00090189104,0.000002195223,0.79820204,0.0005442987,0.000768727,0.0011301284],"study_design_scores_gemma":[0.00084921916,0.00018808314,0.90967524,0.000029966952,0.00008109315,0.000016139265,0.0001393315,0.000004910042,0.08829657,0.000027953343,0.00062374625,0.00006777286],"about_ca_topic_score_codex":0.00037022633,"about_ca_topic_score_gemma":0.0044134674,"teacher_disagreement_score":0.71250004,"about_ca_system_score_codex":0.000008830219,"about_ca_system_score_gemma":0.000015553444,"threshold_uncertainty_score":0.24628185},"labels":[],"label_agreement":null},{"id":"W2106226571","doi":"10.1128/iai.71.4.2272-2275.2003","title":"Mucosal Immunization with a Genetically Engineered Pertussis Toxin S1 Fragment-Cholera Toxin Subunit B Chimeric Protein","year":2003,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Cholera toxin; Biology; Toxin; Pertussis toxin; Diphtheria toxin; Protein subunit; Microbiology; Virology; Immunization; Microbial toxins; Vibrio cholerae; Bordetella pertussis; G protein; Immunology; Antibody; Bacteria; Genetics; Gene; Receptor","score_opus":0.008851576178587223,"score_gpt":0.21267704793529119,"score_spread":0.20382547175670396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106226571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946857,0.00041597435,0.002319952,0.00012197922,0.00040656116,0.00039482585,0.000009520325,0.00015295047,0.0014924991],"genre_scores_gemma":[0.99817955,0.00020929314,0.00020156686,0.00007526022,0.000026056014,0.000078061734,0.0001325292,0.00002567038,0.0010719968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988323,0.00038302835,0.00026490728,0.00021932696,0.000023589546,0.00027688692],"domain_scores_gemma":[0.99938,0.00004504846,0.000093487826,0.00030692876,0.00013409444,0.00004045114],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001907811,0.00023505994,0.00023917179,0.00017505977,0.0005323178,0.000070179034,0.00006736559,0.00022837419,0.0023685421],"category_scores_gemma":[0.00011198611,0.00019445304,0.000054999793,0.00037336707,0.00011056664,0.00019563753,0.000039340342,0.000396333,0.0001541112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013981208,0.0004070802,0.007474051,0.000023858553,0.00017963868,4.988399e-7,0.00034414686,0.000023740684,0.98389864,0.0010776679,0.00012415528,0.0063067195],"study_design_scores_gemma":[0.005072529,0.0017969724,0.25487018,0.000107336906,0.00015186622,0.00045637658,0.0002450896,0.00004979981,0.5365119,0.00011840536,0.19978274,0.0008367821],"about_ca_topic_score_codex":0.0009529272,"about_ca_topic_score_gemma":0.00008015317,"teacher_disagreement_score":0.4473867,"about_ca_system_score_codex":0.000039947303,"about_ca_system_score_gemma":0.00005588556,"threshold_uncertainty_score":0.99854344},"labels":[],"label_agreement":null},{"id":"W2106464635","doi":"10.1099/00221287-147-1-225","title":"Deletion of the cell-division inhibitor MinC results in lysis of Neisseria gonorrhoeae","year":2001,"lang":"en","type":"article","venue":"Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Ottawa","funders":"","keywords":"Neisseria gonorrhoeae; Complementation; Biology; Cell division; Mutant; Homologous recombination; Gene; FtsZ; Escherichia coli; Molecular biology; Genetics; Microbiology; Cell","score_opus":0.007710716321753606,"score_gpt":0.21521764351169334,"score_spread":0.20750692718993974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106464635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761707,0.00047165685,0.000015053663,0.00022589197,0.0010193288,0.00016176589,0.00008814245,0.000011760254,0.00038935925],"genre_scores_gemma":[0.9989594,0.00008719844,0.000032285752,0.000024671821,0.000024132143,0.0000060561224,0.00013568554,0.0000074491327,0.0007230811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987945,0.00025839172,0.0005254271,0.00021161379,0.0000026909343,0.00020736858],"domain_scores_gemma":[0.99925965,0.00009161331,0.00026580028,0.00029562842,0.000080420155,0.0000068745426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022128347,0.00012296533,0.00030199005,0.00013316504,0.00005895924,0.000002394273,0.00018126843,0.00030808282,0.00024091311],"category_scores_gemma":[0.00006323682,0.00008567692,0.00011198041,0.00031160554,0.00013828039,0.00003625537,0.00010511926,0.00015007576,0.0000493675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028260035,0.00017737,0.013218873,0.000010569559,0.000021997022,8.894622e-8,0.0001428019,0.000019455641,0.9839391,0.00004527165,0.0010089981,0.0011328654],"study_design_scores_gemma":[0.001876213,0.00021994021,0.054885443,0.000040960662,0.0000227636,0.00005245632,0.0000888516,0.0000014782692,0.8804859,0.000031607564,0.0621878,0.00010660508],"about_ca_topic_score_codex":0.000670322,"about_ca_topic_score_gemma":0.00050582655,"teacher_disagreement_score":0.10345323,"about_ca_system_score_codex":0.000024627243,"about_ca_system_score_gemma":0.000030398687,"threshold_uncertainty_score":0.34938034},"labels":[],"label_agreement":null},{"id":"W2106522681","doi":"10.1517/14712598.2013.812629","title":"Quadrivalent meningococcal serogroups A, C, W, and Y tetanus toxoid conjugate vaccine (MenACWY-TT): a review","year":2013,"lang":"en","type":"review","venue":"Expert Opinion on Biological Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Reactogenicity; Toxoid; Tetanus; Conjugate vaccine; Medicine; Immunogenicity; Neisseria meningitidis; Vaccination; Meningococcal disease; Meningococcal vaccine; Immunology; Pediatrics; Immunization; Virology; Antigen; Biology","score_opus":0.13174182670930829,"score_gpt":0.3786822260094649,"score_spread":0.2469403993001566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106522681","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025097316,0.99365026,0.000006696245,0.000640944,0.0025695842,0.0023928976,0.000060792285,0.00021754029,0.00021030694],"genre_scores_gemma":[0.00003077444,0.9958138,0.00004423387,0.0012264432,0.00050454726,0.0012490195,0.0008855858,0.000054944292,0.00019068722],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961706,0.0011587399,0.001062208,0.0009853011,0.000035197612,0.0005879707],"domain_scores_gemma":[0.9983109,0.00039446558,0.00049288414,0.0006253349,0.000079292135,0.00009708127],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00041426788,0.00092749123,0.0027606515,0.00014153517,0.0002890871,0.00005751923,0.00041526422,0.0011542292,0.0052825767],"category_scores_gemma":[0.00007614605,0.00050677086,0.00062031683,0.00023036439,0.0001397663,0.000077837605,0.00017475183,0.0007395642,0.0011144207],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081189115,0.00026671504,0.0000047860635,0.0004020529,0.0004098046,0.000001075129,0.000019272014,8.011065e-9,0.0012949244,0.00041556108,0.020242209,0.97686243],"study_design_scores_gemma":[0.0010060271,0.0016206313,0.00002475401,0.008012319,0.000008997352,0.00020151227,0.0000069187913,8.60785e-8,0.00010283375,0.000031253214,0.98835,0.0006347152],"about_ca_topic_score_codex":0.000047781537,"about_ca_topic_score_gemma":7.3872695e-7,"teacher_disagreement_score":0.9762277,"about_ca_system_score_codex":0.00006768837,"about_ca_system_score_gemma":0.000048665974,"threshold_uncertainty_score":0.9997384},"labels":[],"label_agreement":null},{"id":"W2106703106","doi":"10.1086/315801","title":"Intranasal Immunization with Gonococcal Outer Membrane Preparations Reduces the Duration of Vaginal Colonization of Mice by<i>Neisseria gonorrhoeae</i>","year":2000,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Neisseria gonorrhoeae; Nasal administration; Immunization; Vagina; Immune system; Microbiology; Medicine; Gonorrhea; Colonization; Immunology; Neisseriaceae; Biology; Antibiotics; Surgery","score_opus":0.004086120871801808,"score_gpt":0.21796817970695948,"score_spread":0.21388205883515768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106703106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99741733,0.0010311019,0.00047915906,0.00037227498,0.00027178536,0.00021304103,0.00004343117,0.000015078381,0.00015680498],"genre_scores_gemma":[0.9989135,0.000776165,0.000008469457,0.000027290818,0.00007107087,0.0000063728544,0.000054788085,0.0000105466615,0.00013174798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892783,0.0003603493,0.00051565515,0.00006923128,0.000018936471,0.0001079863],"domain_scores_gemma":[0.9987163,0.00016838274,0.0005608443,0.00014939185,0.00038839105,0.000016678021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002188944,0.00011816684,0.00022241939,0.00007405882,0.00025281255,0.000021701366,0.00016036871,0.00006900291,0.0006288554],"category_scores_gemma":[0.000047581696,0.00006455751,0.00007099504,0.0002936876,0.00020045685,0.00028192071,0.000011802559,0.00013687239,0.00000599344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019790647,0.0005913564,0.008122007,0.000027470676,0.000498283,1.0417411e-7,0.0011262643,0.003184181,0.98002803,0.0001482759,0.00223964,0.0020553137],"study_design_scores_gemma":[0.006105083,0.0045508496,0.08602185,0.00027359775,0.002476789,0.0015275206,0.0010771928,0.00014396702,0.88478386,0.00034692066,0.012257657,0.00043468538],"about_ca_topic_score_codex":0.00016220326,"about_ca_topic_score_gemma":0.00005412394,"teacher_disagreement_score":0.09524415,"about_ca_system_score_codex":0.000023670422,"about_ca_system_score_gemma":0.00011049817,"threshold_uncertainty_score":0.68855256},"labels":[],"label_agreement":null},{"id":"W2107142381","doi":"10.1016/j.vaccine.2011.07.009","title":"Immunization with PCEP microparticles containing pertussis toxoid, CpG ODN and a synthetic innate defense regulator peptide induces protective immunity against pertussis","year":2011,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Izaak Walton Killam Health Centre; University of British Columbia; University of Alberta; University of Saskatchewan","funders":"Saskatchewan Health Research Foundation; Cystic Fibrosis Foundation; Bill and Melinda Gates Foundation","keywords":"CpG Oligodeoxynucleotide; Immunology; Immune system; Pertussis toxin; Biology; Immunity; Innate immune system; Bordetella pertussis; Cell biology","score_opus":0.018013960017085887,"score_gpt":0.21087481026441865,"score_spread":0.19286085024733277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107142381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976734,0.0009213111,0.0001249444,0.00018743116,0.0001664786,0.0004619614,0.000018104834,0.00014290983,0.00030347035],"genre_scores_gemma":[0.9991333,0.00013661639,0.0002463181,0.00007839486,0.000031253465,0.00008654765,0.00003660318,0.00003926507,0.00021172687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859214,0.00031581696,0.0003504551,0.00035575416,0.000021383543,0.00036443738],"domain_scores_gemma":[0.9990529,0.000094026436,0.00019879102,0.00039467253,0.00021375016,0.000045848297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002717893,0.000291725,0.00039757133,0.00019583054,0.0005636094,0.000046213787,0.00014651631,0.00021141772,0.0004490165],"category_scores_gemma":[0.00015294683,0.00021208548,0.000057815247,0.00030245067,0.00007277012,0.00026371327,0.00013604044,0.00030949674,0.000045873727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001467824,0.00023768116,0.027038077,0.000026814538,0.00036470767,0.0000037266261,0.0035163271,0.0000020932587,0.9572281,0.00029075425,0.000054974567,0.009768889],"study_design_scores_gemma":[0.0034191848,0.0013186348,0.42029804,0.0002270282,0.00021434428,0.00030638897,0.002896678,0.000021531841,0.56886107,0.00015355935,0.0017391011,0.000544428],"about_ca_topic_score_codex":0.0013610608,"about_ca_topic_score_gemma":0.0002629637,"teacher_disagreement_score":0.39325997,"about_ca_system_score_codex":0.00004600827,"about_ca_system_score_gemma":0.000053035623,"threshold_uncertainty_score":0.86485946},"labels":[],"label_agreement":null},{"id":"W2107588290","doi":"10.1086/315648","title":"Morbidity of Pertussis in Adolescents and Adults","year":2000,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":347,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Ministry of Health and Social Services; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec; Grace (Canada); Université Laval","funders":"","keywords":"Medicine; Pediatrics; Asthma; Pneumonia; Sinusitis; Population; Whooping cough; Urinary incontinence; Disease; Surgery; Internal medicine; Immunology; Environmental health","score_opus":0.0064993848121599465,"score_gpt":0.22695573306470926,"score_spread":0.2204563482525493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107588290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968442,0.0026923278,0.0000021589203,0.000053317803,0.00023021172,0.0000542379,0.000010301074,0.0000061383075,0.00010712988],"genre_scores_gemma":[0.9983202,0.0015669216,5.673126e-7,0.00002603968,0.000042456682,7.975378e-7,8.7683117e-7,0.0000040907694,0.000038006823],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99945384,0.00015646094,0.00024407805,0.000043240263,0.00001253054,0.00008986842],"domain_scores_gemma":[0.999661,0.000051924708,0.0001313917,0.000079718164,0.00005909598,0.000016835282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011758928,0.000067222216,0.00017214686,0.000076538956,0.0000598205,0.0000048623137,0.00006545611,0.000046309728,0.00048748933],"category_scores_gemma":[0.000052665186,0.000040386316,0.00005717529,0.00008804353,0.000078395824,0.00008143845,0.000014158862,0.00011973983,0.000010221995],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013104475,0.00072905235,0.94238,0.000051890504,0.000107593856,0.0000018349889,0.00045546674,0.00004200951,0.023130357,0.000013844064,0.00056272413,0.03121476],"study_design_scores_gemma":[0.0017544818,0.00031582383,0.994767,0.00019645004,0.00008156796,0.00025314337,0.00009498284,0.0000017818985,0.0017645871,0.00011215614,0.0006042908,0.00005372808],"about_ca_topic_score_codex":0.00039645372,"about_ca_topic_score_gemma":0.000099670804,"teacher_disagreement_score":0.052386988,"about_ca_system_score_codex":0.000012580565,"about_ca_system_score_gemma":0.000024151046,"threshold_uncertainty_score":0.5337666},"labels":[],"label_agreement":null},{"id":"W2107808936","doi":"10.1503/cmaj.051637","title":"Whole-cell and acellular pertussis vaccination programs and rates of pertussis among infants and young children","year":2006,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Royal University Hospital; University of Saskatchewan","funders":"","keywords":"Medicine; Incidence (geometry); Pediatrics; Vaccination; Pertussis vaccine; Poisson regression; Whooping cough; Immunization; Cohort; Bordetella pertussis; Immunology; Population; Antibody; Internal medicine; Environmental health","score_opus":0.0036295205139940897,"score_gpt":0.1954355954182701,"score_spread":0.191806074904276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107808936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99560565,0.002072664,0.000009265722,0.0017054989,0.00027941962,0.000097530676,0.000017246273,0.000007791416,0.00020493429],"genre_scores_gemma":[0.9986934,0.00038952817,0.000017126327,0.0000727865,0.0001535044,0.000003528024,0.000053019732,0.0000074105037,0.00060968305],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991891,0.00013073091,0.00027541516,0.0001245273,0.00005342013,0.00022680506],"domain_scores_gemma":[0.99942803,0.00005389938,0.00018729843,0.000042312742,0.00013812432,0.00015033124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048325697,0.00009780265,0.00018555704,0.00013820198,0.00029351222,0.00007259555,0.00004730863,0.0003582172,0.00041721266],"category_scores_gemma":[0.00017201582,0.0000817054,0.000029619368,0.000091801754,0.00005472314,0.00014501778,0.000017325197,0.00030100445,0.000004163695],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000052845976,0.000026820793,0.97479874,0.0000049581004,0.00006198053,0.000001923549,0.00013956924,8.3813724e-8,0.0033666892,0.000029263441,0.0026664715,0.018898245],"study_design_scores_gemma":[0.0010601021,0.00006586156,0.98910576,0.000028313254,0.000041645035,0.00023987725,0.00012854132,0.000018817827,0.0004993803,0.000048204827,0.008668468,0.00009500328],"about_ca_topic_score_codex":0.011445325,"about_ca_topic_score_gemma":0.024034956,"teacher_disagreement_score":0.01880324,"about_ca_system_score_codex":0.00006835407,"about_ca_system_score_gemma":0.0001491712,"threshold_uncertainty_score":0.9951376},"labels":[],"label_agreement":null},{"id":"W2108656611","doi":"10.1093/infdis/jis444","title":"Airborne Transmission of Bordetella pertussis Demonstrated in a Baboon Model of Whooping Cough","year":2012,"lang":"en","type":"letter","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Whooping cough; Bordetella pertussis; Baboon; Virology; Transmission (telecommunications); Microbiology; Medicine; Airborne transmission; Immunology; Biology; Bacteria; Pathology; Vaccination; Coronavirus disease 2019 (COVID-19); Internal medicine; Infectious disease (medical specialty); Computer science; Disease","score_opus":0.015270050046358575,"score_gpt":0.239055296593927,"score_spread":0.22378524654756843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108656611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9734216,0.014115619,0.00069877075,0.010060749,0.0009982825,0.0002757735,0.00016154858,0.000022581668,0.0002450943],"genre_scores_gemma":[0.99452937,0.0028043846,0.000013287766,0.0021300965,0.00033182983,0.0000037521722,0.000036587335,0.000031545173,0.00011912984],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99813205,0.0004847485,0.0009415057,0.00010671929,0.000052789885,0.00028220325],"domain_scores_gemma":[0.9980095,0.00034317138,0.0010737489,0.00022745371,0.0003183478,0.000027762735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031146343,0.00026587234,0.00078139827,0.00037663418,0.00008986556,0.000008127302,0.00024071735,0.00054852956,0.0003156626],"category_scores_gemma":[0.000078519115,0.00016783505,0.0003355954,0.00022869895,0.00017510624,0.00014047531,0.00003111439,0.0010061034,0.000004400471],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002592711,0.002343775,0.026967712,0.0016415089,0.0027293302,0.000019722858,0.0021231049,0.004748329,0.717411,0.00005165183,0.21925695,0.020114217],"study_design_scores_gemma":[0.04316008,0.011968865,0.14587307,0.022793485,0.025804164,0.00798488,0.0016381379,0.0018818411,0.31023008,0.006696099,0.41609564,0.0058736517],"about_ca_topic_score_codex":0.00021591729,"about_ca_topic_score_gemma":0.000016386335,"teacher_disagreement_score":0.4071809,"about_ca_system_score_codex":0.000054291846,"about_ca_system_score_gemma":0.00026666897,"threshold_uncertainty_score":0.68441147},"labels":[],"label_agreement":null},{"id":"W2108773652","doi":"10.1128/iai.73.11.7390-7397.2005","title":"Enhanced Factor H Binding to Sialylated Gonococci Is Restricted to the Sialylated Lacto-<i>N</i>-Neotetraose Lipooligosaccharide Species: Implications for Serum Resistance and Evidence for a Bifunctional Lipooligosaccharide Sialyltransferase in Gonococci","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Sialyltransferase; Sialic acid; Neisseria gonorrhoeae; Microbiology; Strain (injury); N-Acetylneuraminic acid; Neisseria; Typing; Chemistry; Biology; Biochemistry; Bacteria; Genetics","score_opus":0.05318706140150698,"score_gpt":0.31159382884032155,"score_spread":0.2584067674388146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108773652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98076993,0.00045413995,0.006554587,0.00804098,0.00074334996,0.002471796,0.0007960108,0.0001337814,0.000035423534],"genre_scores_gemma":[0.9962811,0.0007137184,0.00018830344,0.0006568754,0.00020651867,0.000832965,0.00011993779,0.000031547686,0.00096906075],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980488,0.00019499545,0.00065743754,0.0005562726,0.000028144806,0.00051438384],"domain_scores_gemma":[0.99799794,0.0009856189,0.00015567,0.00043394652,0.00032236055,0.00010445602],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038020874,0.00034421572,0.00041275186,0.00047413044,0.0010774342,0.00016233258,0.00018806173,0.00031475918,0.00021632043],"category_scores_gemma":[0.00089136144,0.00029645028,0.00013168655,0.00094326126,0.00007937325,0.0004494021,0.00008669253,0.0003971832,0.000044560602],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013408946,0.00017035296,0.0048769778,0.000051442836,0.00012243731,5.1433368e-8,0.0010865101,0.000055076,0.98301834,0.00027997454,0.0018478835,0.0071500666],"study_design_scores_gemma":[0.0026908717,0.00060497405,0.60119414,0.0002245916,0.00010369098,0.000020304808,0.000119578246,0.00003532241,0.24324882,0.0001246995,0.15110934,0.0005236748],"about_ca_topic_score_codex":0.0012083687,"about_ca_topic_score_gemma":0.0064508473,"teacher_disagreement_score":0.7397695,"about_ca_system_score_codex":0.00018182119,"about_ca_system_score_gemma":0.00012278387,"threshold_uncertainty_score":0.99994874},"labels":[],"label_agreement":null},{"id":"W2109654230","doi":"10.1542/peds.2010-0277","title":"Clinical Features Suggestive of Meningitis in Children: A Systematic Review of Prospective Data","year":2010,"lang":"en","type":"review","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women and Children’s Health Research Institute; University of Alberta","funders":"","keywords":"Medicine; Meningitis; Confidence interval; Prospective cohort study; Pediatrics; Likelihood ratios in diagnostic testing; Clinical significance; MEDLINE; Internal medicine","score_opus":0.035782191945276834,"score_gpt":0.3657909909087007,"score_spread":0.3300087989634239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109654230","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013311286,0.99505025,0.0000021676485,0.0000049318774,0.0009127393,0.0024243824,0.001364878,0.000016636764,0.00009087539],"genre_scores_gemma":[0.00004911159,0.99795574,0.00006920484,0.0000048213215,0.00018569533,0.00009680321,0.0015040656,0.000025165633,0.00010937638],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9967066,0.00070075726,0.0019314243,0.0004418993,0.000030288205,0.00018903562],"domain_scores_gemma":[0.9960475,0.0008735803,0.0018280573,0.001045449,0.00018787896,0.000017533186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014083084,0.0003047295,0.0038931735,0.00025891486,0.00002966917,0.0000057210946,0.00068812375,0.0008235671,0.00008309544],"category_scores_gemma":[0.0030336713,0.0002155902,0.00039049535,0.0005853582,0.00010570814,0.00006548917,0.00036565767,0.0010404165,0.00003665821],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006002994,0.00024030253,0.003044941,0.9704449,0.00038180134,6.763366e-7,0.000013484748,3.5742465e-9,0.0000015222998,0.00012024992,0.0018533361,0.02389276],"study_design_scores_gemma":[0.000949274,0.00040173982,0.0036215242,0.86432284,0.017951645,0.0005997094,0.000010003226,3.9974147e-8,0.000006319201,0.000025531193,0.111397564,0.0007138125],"about_ca_topic_score_codex":0.00009500208,"about_ca_topic_score_gemma":0.000023276683,"teacher_disagreement_score":0.109544225,"about_ca_system_score_codex":0.000022524606,"about_ca_system_score_gemma":0.00031048738,"threshold_uncertainty_score":0.87915134},"labels":[],"label_agreement":null},{"id":"W2109727663","doi":"10.14740/ijcp225w","title":"Pneumococcal Meningitis in a Child With Sickle Cell Anemia: A Case Report","year":2015,"lang":"en","type":"article","venue":"International Journal of Clinical Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Cefotaxime; Meningitis; Streptococcus pneumoniae; Ceftriaxone; Vancomycin; Pediatrics; Osteomyelitis; Pneumococcal vaccine; Antibiotics; Pneumococcal infections; Surgery; Staphylococcus aureus; Microbiology","score_opus":0.03810360146354102,"score_gpt":0.3505093670957229,"score_spread":0.31240576563218186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109727663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991794,0.00035194235,0.00019791718,0.00080955954,0.0047281054,0.00005849347,0.000011777778,0.000010490365,0.002037723],"genre_scores_gemma":[0.99779236,0.00012102914,0.00029658724,0.000037686063,0.0014122016,0.0000017333551,0.000014285657,0.000010051037,0.0003140408],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99828917,0.00014284393,0.0012099203,0.00014558234,0.00007090913,0.00014157908],"domain_scores_gemma":[0.99791837,0.0003626087,0.0008059492,0.00010691443,0.0007329613,0.0000732265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012445354,0.00010575826,0.00032857613,0.00021908458,0.000029689854,0.000028497272,0.00020260073,0.00021147069,0.00010876398],"category_scores_gemma":[0.0010034583,0.00007850275,0.00013563063,0.0001413455,0.00005734452,0.00018259906,0.00006322843,0.00070651877,0.000038872215],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042748502,0.0033198458,0.73027754,0.000021942777,0.00038429993,0.23009913,0.0005436393,0.00052357675,0.00215512,0.0002275331,0.018781958,0.009390556],"study_design_scores_gemma":[0.014014184,0.0022412075,0.034984034,0.00005885884,0.00020178471,0.8791011,0.00047410958,0.0000107283795,0.0010265862,0.00033397725,0.067203455,0.00034995476],"about_ca_topic_score_codex":0.00012602359,"about_ca_topic_score_gemma":0.00007525896,"teacher_disagreement_score":0.6952935,"about_ca_system_score_codex":0.00004654218,"about_ca_system_score_gemma":0.00028299572,"threshold_uncertainty_score":0.32012495},"labels":[],"label_agreement":null},{"id":"W2109921113","doi":"10.1016/j.vetmic.2015.09.012","title":"Characterization and pathogenic role of outer membrane vesicles produced by the fish pathogen Piscirickettsia salmonis under in vitro conditions","year":2015,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Fondo de Financiamiento de Centros de Investigación en Áreas Prioritarias","keywords":"Biology; Microbiology; Pathogen; Bacterial outer membrane; Virulence; Effector; In vitro; Bacteria; Virology; Cell biology; Biochemistry; Gene; Escherichia coli; Genetics","score_opus":0.02156593540050337,"score_gpt":0.2424806724483042,"score_spread":0.22091473704780085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109921113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967258,0.00063343433,0.000014357553,0.00075072737,0.00044984778,0.00030341287,0.0010716118,0.000032280303,0.000018551435],"genre_scores_gemma":[0.9977584,0.000072865194,0.000015065223,0.00016985644,0.00004340412,0.000053110856,0.0017157501,0.000016755184,0.00015480876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987205,0.00039252816,0.0003281929,0.00029584748,0.000007503408,0.00025539257],"domain_scores_gemma":[0.99946755,0.000062448395,0.00014373034,0.00024218288,0.000062928855,0.000021172327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022151397,0.00017234415,0.00028853363,0.00010232421,0.000102020735,0.000012978781,0.00014079476,0.0002238524,0.000080508544],"category_scores_gemma":[0.000022945618,0.00013064496,0.000047692585,0.00014120784,0.00022639014,0.000106466585,0.00011736717,0.00014762107,0.000029624833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027734603,0.000104369065,0.00051018543,0.000009933891,0.000053351385,0.0000016396892,0.00033569668,5.508114e-7,0.9973684,0.000037221245,0.0002518855,0.0010494266],"study_design_scores_gemma":[0.0010295535,0.0004290188,0.008627681,0.000011468813,0.00002844099,0.00087424356,0.00022842883,0.0000016370683,0.95471615,0.000050852042,0.03383692,0.00016559617],"about_ca_topic_score_codex":0.00007882179,"about_ca_topic_score_gemma":0.000011858882,"teacher_disagreement_score":0.042652234,"about_ca_system_score_codex":0.000026131996,"about_ca_system_score_gemma":0.000038925584,"threshold_uncertainty_score":0.53275466},"labels":[],"label_agreement":null},{"id":"W2109945233","doi":"10.1128/jb.05136-11","title":"Transcriptional Profiling of the Iron Starvation Response in Bordetella pertussis Provides New Insights into Siderophore Utilization and Virulence Gene Expression","year":2011,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ECW Press (Canada)","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Bordetella pertussis; Biology; Virulence; Microbiology; Siderophore; Bordetella; Secretion; Ferrichrome; Gene; Bordetella bronchiseptica; Bacterial outer membrane; Bacteria; Genetics; Escherichia coli; Biochemistry","score_opus":0.03716770841723926,"score_gpt":0.2516090391598524,"score_spread":0.21444133074261312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109945233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99719036,0.0015628734,0.000349538,0.00016336513,0.0005956251,0.00012433864,0.0000024664128,0.000003925842,0.0000075141133],"genre_scores_gemma":[0.99837685,0.0005235909,0.0009889953,0.000027813538,0.000039168604,0.0000026203738,0.000005044759,0.000006570953,0.000029357332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987895,0.0004752635,0.00049975293,0.00011581307,0.000018367404,0.00010134061],"domain_scores_gemma":[0.9992826,0.000093948234,0.00038237337,0.00010319708,0.00012075519,0.000017149585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027880885,0.00009858233,0.00022774276,0.0001679175,0.000078561985,0.000005597051,0.000105572195,0.00018866303,0.000112915164],"category_scores_gemma":[0.00017380621,0.0000619135,0.000055088836,0.00010834779,0.00011029167,0.0001971008,0.000033637312,0.00018487658,0.0000011639308],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029643634,0.00006735921,0.023922872,0.000016010319,0.000016862612,7.1934073e-7,0.0022285597,0.0000050967815,0.9687474,0.0000733174,0.000016276228,0.0019411565],"study_design_scores_gemma":[0.00063698366,0.00049400784,0.44307175,0.00007179383,0.000015615886,0.00007897995,0.00016783466,0.0000048466745,0.5542075,0.00043800127,0.00076151814,0.00005117487],"about_ca_topic_score_codex":0.00011404067,"about_ca_topic_score_gemma":0.000050268813,"teacher_disagreement_score":0.4191489,"about_ca_system_score_codex":0.00002927226,"about_ca_system_score_gemma":0.00013823647,"threshold_uncertainty_score":0.25247595},"labels":[],"label_agreement":null},{"id":"W2110156862","doi":"10.1128/aac.00788-10","title":"Molecular Analysis of Antimicrobial Resistance Mechanisms in<i>Neisseria gonorrhoeae</i>Isolates from Ontario, Canada","year":2010,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Mount Sinai Hospital; University of Toronto; Toronto Public Health","funders":"","keywords":"Spectinomycin; MTRR; Neisseria gonorrhoeae; Microbiology; Cefixime; Biology; Penicillin; Antibiotic resistance; Cephalosporin; Quinolone; Tetracycline; Ceftriaxone; Ciprofloxacin; Lincosamides; Antibiotics; Resistome; Genetics; Integron; Genotype; Gene","score_opus":0.0045107614726394496,"score_gpt":0.2030708054779664,"score_spread":0.19856004400532695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110156862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796844,0.000033943623,0.000053464635,0.000546267,0.00090406847,0.00014702193,0.00017891705,0.000017457314,0.0001504478],"genre_scores_gemma":[0.9977858,0.000105506035,0.00024679682,0.0011365527,0.000018964793,0.0000037314164,0.00026356423,0.000020465124,0.00041862213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988819,0.000043273216,0.00039479067,0.00037626503,0.00000931497,0.00029450894],"domain_scores_gemma":[0.99942166,0.000031198688,0.00016966533,0.00028757376,0.000060689035,0.00002923049],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000796602,0.00023516754,0.00052726996,0.00017465341,0.00010712188,0.000030665375,0.00018484311,0.00023562764,0.002012516],"category_scores_gemma":[0.000006074164,0.00022305392,0.00012381244,0.00037269658,0.00007417928,0.00007671164,0.000043742886,0.0002695175,0.0000038738926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018332298,0.00012728569,0.036974605,0.000008078641,0.0007921821,9.791361e-7,0.00022884905,0.000007080434,0.9571349,0.00014881934,0.0041400176,0.0002539037],"study_design_scores_gemma":[0.0020972388,0.000032808173,0.28184098,0.000036940033,0.00033430196,0.000006634668,0.000031389045,0.000007912263,0.6506625,0.00008922497,0.06446672,0.0003933535],"about_ca_topic_score_codex":0.83993256,"about_ca_topic_score_gemma":0.979713,"teacher_disagreement_score":0.3064724,"about_ca_system_score_codex":0.000039122413,"about_ca_system_score_gemma":0.00016883534,"threshold_uncertainty_score":0.99889976},"labels":[],"label_agreement":null},{"id":"W2111427115","doi":"10.1074/jbc.m115.653881","title":"Bordetella pertussis Lipid A Recognition by Toll-like Receptor 4 and MD-2 Is Dependent on Distinct Charged and Uncharged Interfaces","year":2015,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Lipid A; Bordetella pertussis; TLR4; Receptor; Toll-like receptor; Innate immune system; Pattern recognition receptor; Mutagenesis; Biology; Chemistry; Microbiology; Biochemistry; Lipopolysaccharide; Immunology; Bacteria; Mutation; Genetics; Gene","score_opus":0.03468501174633404,"score_gpt":0.25082774548109876,"score_spread":0.21614273373476472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111427115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99570364,0.0028053047,0.0000068834543,0.00059301505,0.0004945572,0.00005098092,0.000089933914,0.000014898716,0.00024079402],"genre_scores_gemma":[0.9976394,0.001559427,0.000030944007,0.0001234699,0.00017841945,0.000003481337,0.00005206648,0.000006008325,0.00040674332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992177,0.00008775056,0.00032157454,0.00018948581,0.000022673055,0.00016080799],"domain_scores_gemma":[0.99939084,0.000101579884,0.00023697047,0.0000734673,0.000118730524,0.00007843998],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002803996,0.00015727238,0.0002999284,0.000024255114,0.0000856026,0.00003078283,0.00008122863,0.00031014538,0.0009838232],"category_scores_gemma":[0.00025585163,0.0000988331,0.000056198995,0.000040292536,0.00009986459,0.000054297994,0.000053096126,0.00031874364,0.000027999755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006691677,0.00013751065,0.0038058844,0.000012122814,0.0000817145,0.0000011910282,0.00007303499,1.8360394e-8,0.9681061,3.5794773e-7,0.020078883,0.0070340023],"study_design_scores_gemma":[0.0015389263,0.00095210236,0.00091654743,0.00006503524,0.000035141,0.00042150274,0.00023917074,5.2970074e-7,0.93668556,0.000057919908,0.058908023,0.00017952142],"about_ca_topic_score_codex":0.000007745569,"about_ca_topic_score_gemma":7.081892e-7,"teacher_disagreement_score":0.038829144,"about_ca_system_score_codex":0.000031310108,"about_ca_system_score_gemma":0.000020056581,"threshold_uncertainty_score":0.9999294},"labels":[],"label_agreement":null},{"id":"W2112060135","doi":"10.1128/iai.72.1.559-569.2004","title":"Development, Characterization, and Functional Activity of a Panel of Specific Monoclonal Antibodies to Inner Core Lipopolysaccharide Epitopes in<i>Neisseria meningitidis</i>","year":2003,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Medical Research Council","keywords":"Neisseria meningitidis; Monoclonal antibody; Epitope; Biology; Lipopolysaccharide; Microbiology; Neisseriaceae; Virology; Epitope mapping; Antibody; Immunology; Bacteria; Antibiotics","score_opus":0.04466217521099183,"score_gpt":0.2541083486597322,"score_spread":0.20944617344874036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112060135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998615,0.00011742039,0.0004702544,0.000020295616,0.0004973561,0.00013862422,0.000018641844,0.000017883678,0.00010449795],"genre_scores_gemma":[0.999357,0.00031614525,0.000097368655,0.000012007978,0.000012099176,0.000013874247,0.000047747446,0.0000070084593,0.00013675817],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999309,0.000114446775,0.00028881413,0.00014817223,0.000013295534,0.00012628653],"domain_scores_gemma":[0.9995734,0.00005420866,0.00013707555,0.0001063973,0.000109461296,0.00001942043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022764826,0.00012569441,0.00024886036,0.00021081459,0.0001718063,0.000012393602,0.000025673611,0.00011124845,0.00022943055],"category_scores_gemma":[0.00006736865,0.00011847192,0.000026328276,0.00017923834,0.000088914574,0.00017715537,0.000046272293,0.0001406735,0.000005329162],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011412101,0.00014044919,0.1804866,0.00002244656,0.00004066416,5.1851693e-8,0.00037597655,0.0000011098365,0.81380826,0.000795912,0.000016422913,0.0041979947],"study_design_scores_gemma":[0.0003670821,0.000055474862,0.58905894,0.000024471223,0.0000057926777,0.00002300675,0.00004837947,5.3250193e-7,0.40139723,0.000023051904,0.008921322,0.00007472125],"about_ca_topic_score_codex":0.00043995414,"about_ca_topic_score_gemma":0.00015558122,"teacher_disagreement_score":0.41241103,"about_ca_system_score_codex":0.000016220125,"about_ca_system_score_gemma":0.000040526244,"threshold_uncertainty_score":0.48311448},"labels":[],"label_agreement":null},{"id":"W2112537214","doi":"10.1093/cid/civ028","title":"Outcomes of Invasive Meningococcal Disease in Adults and Children in Canada Between 2002 and 2011: A Prospective Cohort Study","year":2015,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Children's Hospital of Eastern Ontario; University of Alberta; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; Stollery Children's Hospital; University of British Columbia","funders":"Sanofi Pasteur; Sanofi; GlaxoSmithKline; Michael Smith Health Research BC; Pfizer","keywords":"Medicine; Meningococcal disease; Neisseria meningitidis; Case fatality rate; Meningitis; Meningococcal meningitis; Prospective cohort study; Pediatrics; Cohort; Cohort study; Epidemiology; Internal medicine","score_opus":0.018545716072992973,"score_gpt":0.2927696983805283,"score_spread":0.2742239823075353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112537214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975431,0.0007676907,4.159158e-7,0.000058942525,0.00027901217,0.0011094909,0.00017815917,0.00002193225,0.00004126791],"genre_scores_gemma":[0.9996368,0.00010057445,6.174809e-7,0.000035556037,0.000039605005,0.00010598796,0.00004016558,0.000010772966,0.000029898976],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984131,0.00035487962,0.00059831847,0.00039416377,0.000028664019,0.00021086827],"domain_scores_gemma":[0.99881953,0.000576417,0.0001524854,0.00018530767,0.00008580444,0.00018044094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002486062,0.00017866468,0.00065146957,0.00011244693,0.00004795781,0.000010176413,0.00006888525,0.000092766466,0.00008211018],"category_scores_gemma":[0.0012318225,0.00014950665,0.000047665682,0.00011738343,0.00016485836,0.00010017913,0.00013616448,0.00022213756,0.0000080642685],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020254588,0.0008675339,0.99783176,0.000012222714,0.00023171352,0.000004808526,0.00009847411,0.0000028312745,0.000003929992,0.000011018778,0.0002928941,0.00044028176],"study_design_scores_gemma":[0.005369695,0.00049426843,0.9934759,0.0000363595,0.00013912962,0.000001718105,0.00015347631,0.0000011059583,0.0000069018706,0.00014861504,0.000012963608,0.00015983156],"about_ca_topic_score_codex":0.52039725,"about_ca_topic_score_gemma":0.6779273,"teacher_disagreement_score":0.1575301,"about_ca_system_score_codex":0.000109330766,"about_ca_system_score_gemma":0.0006721604,"threshold_uncertainty_score":0.6096704},"labels":[],"label_agreement":null},{"id":"W2112882269","doi":"10.1016/j.chembiol.2014.11.016","title":"Antigenic Potential of a Highly Conserved Neisseria meningitidis Lipopolysaccharide Inner Core Structure Defined by Chemical Synthesis","year":2015,"lang":"en","type":"article","venue":"Chemistry & Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"Studienstiftung des Deutschen Volkes; Max-Planck-Gesellschaft; Körber-Stiftung; Bundesministerium für Bildung und Forschung","keywords":"Neisseria meningitidis; Tetrasaccharide; Glycan; Glycoconjugate; Antigen; Lipopolysaccharide; Epitope; Microbiology; Polyclonal antibodies; Biology; Antibody; Neisseriaceae; Bacteria; Immunology; Molecular biology; Glycoprotein; Biochemistry; Antibiotics; Polysaccharide; Genetics","score_opus":0.015462020315520754,"score_gpt":0.23584778341064352,"score_spread":0.22038576309512278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112882269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971282,0.0011699937,0.000025273128,0.00020647628,0.0006486861,0.000086274624,0.0005175164,0.00007842024,0.00013919524],"genre_scores_gemma":[0.9984882,0.000032375952,0.00013344483,0.000030974687,0.00011588372,0.000018280338,0.0008331742,0.000020661255,0.00032701617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987442,0.00006630474,0.0004312898,0.00038055444,0.000012864689,0.00036482047],"domain_scores_gemma":[0.9990935,0.00010169299,0.0002386896,0.00033875706,0.00016515418,0.000062251784],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000104578416,0.00026108723,0.0005528779,0.00003500154,0.0000704198,0.0000099556755,0.000271723,0.0007265102,0.0015623657],"category_scores_gemma":[0.00035146845,0.00022320448,0.00013807043,0.00010822763,0.00032615612,0.00004215596,0.00012885539,0.00024054038,0.00003415165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026464133,0.00009638219,0.002237333,0.000027794353,0.00022521056,8.0389907e-7,0.000025625224,4.1177088e-7,0.99082196,0.00007881384,0.00575702,0.00046401305],"study_design_scores_gemma":[0.0009703876,0.00006610296,0.0001667074,0.000016215954,0.00009874451,0.00017945282,0.00006103525,0.0000023914854,0.9884286,0.00024236186,0.00954022,0.00022780603],"about_ca_topic_score_codex":0.0003065177,"about_ca_topic_score_gemma":0.0000055070436,"teacher_disagreement_score":0.0037832002,"about_ca_system_score_codex":0.000034797344,"about_ca_system_score_gemma":0.00011849905,"threshold_uncertainty_score":0.99935037},"labels":[],"label_agreement":null},{"id":"W2114035410","doi":"10.1128/iai.73.4.2213-2221.2005","title":"Elucidation of the Monoclonal Antibody 5G8-Reactive, Virulence-Associated Lipopolysaccharide Epitope of<i>Haemophilus influenzae</i>and Its Role in Bacterial Resistance to Complement-Mediated Killing","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Medical Research Council","keywords":"Epitope; Haemophilus influenzae; Monoclonal antibody; Phase variation; Biology; Heptose; Virulence; Tetrasaccharide; Molecular biology; Microbiology; Virulence factor; Antigen; Mutant; Antibody; Biochemistry; Gene; Genetics","score_opus":0.015056974603910062,"score_gpt":0.2685308660810267,"score_spread":0.25347389147711663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114035410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984893,0.0003405449,0.000014661637,0.0001946211,0.00047961326,0.00027706867,0.00008080938,0.000021397289,0.0001019586],"genre_scores_gemma":[0.9994563,0.00032722898,0.000012638741,0.000041694653,0.000031616702,0.000012479014,0.000073607225,0.0000075872204,0.00003685537],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989323,0.0003002157,0.00042465684,0.00015223265,0.00002583458,0.00016476163],"domain_scores_gemma":[0.99929875,0.00013038905,0.00025589005,0.00014637967,0.00014932876,0.00001926923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003436774,0.00013089257,0.00026294414,0.00014951653,0.00021553658,0.000014427957,0.00007914518,0.00014862842,0.00012445565],"category_scores_gemma":[0.00023145291,0.000111046495,0.000045244873,0.00025503512,0.00006923543,0.000228126,0.00010482943,0.00023853974,0.000008213431],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021882709,0.00016288136,0.05403077,0.000011791145,0.00006400644,3.003712e-8,0.00043970547,0.000013806218,0.9433683,0.00014448454,0.000024036966,0.0015213406],"study_design_scores_gemma":[0.0011177133,0.000099264296,0.5768065,0.00009041673,0.000023873665,0.000004481413,0.00006243764,0.000028995059,0.4144108,0.000036826255,0.0072104437,0.00010824386],"about_ca_topic_score_codex":0.0032915538,"about_ca_topic_score_gemma":0.0027227069,"teacher_disagreement_score":0.52895755,"about_ca_system_score_codex":0.00004705367,"about_ca_system_score_gemma":0.00003343312,"threshold_uncertainty_score":0.49758667},"labels":[],"label_agreement":null},{"id":"W2114102020","doi":"10.1099/jmm.0.000006-0","title":"Genetic and antigenic characterization of Canadian invasive Neisseria meningitidis serogroup C (MenC) case isolates in the post-MenC conjugate vaccine era, 2009-2013","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Institut National de Santé Publique du Québec; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; Manitoba Health; BC Mental Health & Substance Use Services; Public Health Agency of Canada","funders":"European Commission; Wellcome Trust","keywords":"Neisseria meningitidis; Biology; Serotype; Gene; Conjugate vaccine; Neisseria; Antigen; Microbiology; Genetics; Virology; Immunization; Bacteria","score_opus":0.013529714757695111,"score_gpt":0.2350964833638498,"score_spread":0.2215667686061547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114102020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99123985,0.0023132255,0.000012141634,0.005231376,0.00095590163,0.00016527233,0.00006868964,0.000003887963,0.000009646197],"genre_scores_gemma":[0.997829,0.0014293393,0.00004922074,0.0004719881,0.00011421663,0.000003427865,0.00007354464,0.000009241559,0.000019982044],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99836713,0.00046665216,0.0007004857,0.0001457272,0.000017984563,0.00030200038],"domain_scores_gemma":[0.99894094,0.0001642037,0.0003859993,0.00012756615,0.000261474,0.00011978647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087845407,0.00015726135,0.00043020226,0.00047381443,0.000084305386,0.000017237588,0.00024224914,0.00040296404,0.00051132054],"category_scores_gemma":[0.00028068258,0.00010263188,0.00006214543,0.00027366547,0.00013157506,0.000106449355,0.00005260725,0.00043733415,0.00001735004],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014534139,0.0000801144,0.015003778,0.0000140601405,0.00012452857,0.00015869009,0.0010365383,7.1255147e-7,0.9810611,0.000040912848,0.0014145365,0.0009196738],"study_design_scores_gemma":[0.017022211,0.0082338415,0.42242795,0.0005731369,0.00048621825,0.3551805,0.0053981706,0.000027807442,0.09396563,0.00032279117,0.09544779,0.00091392954],"about_ca_topic_score_codex":0.032700196,"about_ca_topic_score_gemma":0.060653377,"teacher_disagreement_score":0.8870955,"about_ca_system_score_codex":0.000035259003,"about_ca_system_score_gemma":0.00045602024,"threshold_uncertainty_score":0.9737411},"labels":[],"label_agreement":null},{"id":"W2114291842","doi":"10.1016/j.vaccine.2010.09.034","title":"The safety of immunizing with tetanus–diphtheria–acellular pertussis vaccine (Tdap) less than 2 years following previous tetanus vaccination: Experience during a mass vaccination campaign of healthcare personnel during a respiratory illness outbreak","year":2010,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Reactogenicity; Medicine; Tetanus; Vaccination; Diphtheria; Toxoid; Pediatrics; Adverse effect; Immunization; Poliomyelitis; Immunology; Internal medicine; Antigen","score_opus":0.010580096219834528,"score_gpt":0.23705788617043938,"score_spread":0.22647778995060486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114291842","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933823,0.003779234,0.00011386356,0.00030101367,0.0013379751,0.00084389956,0.000035034234,0.00012254296,0.00008417504],"genre_scores_gemma":[0.9988835,0.00027758346,0.00012475437,0.000012871709,0.00014896106,0.000093499955,0.000033866716,0.00007803475,0.00034694636],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997219,0.00037973918,0.0010591488,0.0005900894,0.000121373574,0.0006306396],"domain_scores_gemma":[0.9974566,0.00023233671,0.00078026374,0.0010351364,0.0004252699,0.00007040132],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00072404114,0.00046009832,0.0008146672,0.0003155215,0.0012806767,0.000054371245,0.0005949201,0.00036384552,0.00027983825],"category_scores_gemma":[0.00018496101,0.000339463,0.00027235437,0.0007237934,0.000026964359,0.00042225822,0.00018745621,0.00064136484,0.000007981472],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001493501,0.00015621292,0.07140538,0.0002160389,0.00036593463,0.000011335794,0.0063686804,0.000029687191,0.91390175,0.00020210982,0.000006896766,0.005842469],"study_design_scores_gemma":[0.0060538827,0.00040252338,0.65548694,0.00026444517,0.00017344681,0.00018872287,0.015932545,0.00001408106,0.31957868,0.000018106432,0.0013456581,0.00054099096],"about_ca_topic_score_codex":0.00093779434,"about_ca_topic_score_gemma":0.00158146,"teacher_disagreement_score":0.5943231,"about_ca_system_score_codex":0.0001228164,"about_ca_system_score_gemma":0.00011993954,"threshold_uncertainty_score":0.99990577},"labels":[],"label_agreement":null},{"id":"W2114545002","doi":"10.1139/cjm-47-4-283","title":"The panmictic nature of &lt;i&gt;Neisseria meningitidis&lt;/i&gt; serogroup B during a period of endemic disease in Canada","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Serotype; Neisseria meningitidis; Biology; Microbiology; Genetic diversity; Neisseriaceae; Genotype; Meningococcal disease; Virology; Bacteria; Genetics; Antibiotics; Population; Gene; Medicine","score_opus":0.0048769837613169996,"score_gpt":0.19213744292204082,"score_spread":0.1872604591607238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114545002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98004097,0.017044188,0.0000013559124,0.00069940434,0.0018661759,0.0001235886,0.00016178029,0.0000030494286,0.00005946649],"genre_scores_gemma":[0.9991576,0.00045752796,0.000009027901,0.00005202237,0.00006309487,0.0000037397008,0.000031844025,0.000016556613,0.0002085627],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99824744,0.00026820714,0.0007647006,0.00016949467,0.00001204535,0.0005381105],"domain_scores_gemma":[0.99869955,0.00013042703,0.00050425093,0.0002475791,0.00027110174,0.00014710326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002763221,0.00019714463,0.00049026194,0.00028717998,0.0002144548,0.0000101961805,0.00039980636,0.00028123663,0.000393537],"category_scores_gemma":[0.0002115137,0.00015223911,0.00014268528,0.00025439807,0.00024717688,0.000072735056,0.00003174687,0.00053373806,0.0000041948797],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028084332,0.000020423295,0.063162126,0.000020891306,0.00018243495,0.000058160796,0.00016825933,0.000032871278,0.9344356,0.0002613726,0.0011673972,0.00020959107],"study_design_scores_gemma":[0.0045144754,0.000508526,0.6118558,0.00040519555,0.0002528692,0.008228121,0.0008688791,0.0000036423364,0.07222552,0.00016245992,0.3003547,0.0006197963],"about_ca_topic_score_codex":0.18965489,"about_ca_topic_score_gemma":0.9638925,"teacher_disagreement_score":0.8622101,"about_ca_system_score_codex":0.00038291985,"about_ca_system_score_gemma":0.0036631154,"threshold_uncertainty_score":0.8157413},"labels":[],"label_agreement":null},{"id":"W2114578554","doi":"10.1016/j.ijid.2014.08.002","title":"Pertactin-negative Bordetella pertussis strains in Canada: characterization of a dozen isolates based on a survey of 224 samples collected in different parts of the country over the last 20 years","year":2014,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Saskatchewan Disease Control Laboratory; Alberta Health Services; University of Calgary; Provincial Laboratory of Public Health; Ste. Anne's Hospital; University of Toronto; Public Health Ontario; Public Health Agency of Canada","funders":"University of Waterloo","keywords":"Pertactin; Bordetella pertussis; Biology; Microbiology; Pulsed-field gel electrophoresis; Pertussis toxin; Virology; Genetics; Gene; Genotype; Bacteria; G protein","score_opus":0.007909029932823572,"score_gpt":0.22231875296641673,"score_spread":0.21440972303359315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114578554","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837667,0.000027719316,0.000017754437,0.00011031168,0.00072418695,0.00011130617,0.0006024571,0.0000019289257,0.000027680851],"genre_scores_gemma":[0.9998015,0.000040752966,5.6891423e-7,0.000055815068,0.000032378306,0.000004283901,0.00005091651,0.000006690494,0.000007083922],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882054,0.00043588833,0.00049829733,0.00007893693,0.00007492404,0.00009140603],"domain_scores_gemma":[0.99808425,0.00079569296,0.00062248093,0.00009525604,0.00038880724,0.0000135087785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015851433,0.00010218348,0.0002747517,0.00018381471,0.000031250936,0.000010350995,0.0001837807,0.000050072482,0.00017269958],"category_scores_gemma":[0.00077971234,0.000060735594,0.00008177114,0.00020720389,0.000074282274,0.000054780437,0.000027451266,0.00014094767,2.0657986e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041500272,0.00040893245,0.9438939,0.000009330861,0.00018990925,4.84884e-7,0.00017033232,0.00048885786,0.05387895,0.00002735072,0.00009022618,0.00042670482],"study_design_scores_gemma":[0.0013174029,0.0001672045,0.99138856,0.00016415892,0.000028531293,0.00000655936,0.000052267504,0.00016972213,0.006501035,0.000022694529,0.0001273065,0.000054562013],"about_ca_topic_score_codex":0.16844256,"about_ca_topic_score_gemma":0.55541354,"teacher_disagreement_score":0.38697097,"about_ca_system_score_codex":0.00017059606,"about_ca_system_score_gemma":0.0005235471,"threshold_uncertainty_score":0.83709484},"labels":[],"label_agreement":null},{"id":"W2114791730","doi":"10.1086/657409","title":"Variability in the Lipooligosaccharide Structure and Endotoxicity among<i>Bordetella pertussis</i>Strains","year":2010,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Institut National de la Santé et de la Recherche Médicale","keywords":"Bordetella pertussis; Lipid A; Microbiology; Toll-like receptor; Biology; Bordetella; Pertussis toxin; Heptose; Lipopolysaccharide; Bacteria; Receptor; Innate immune system; Immunology; Mutant; Biochemistry; Gene; G protein","score_opus":0.004658883111310823,"score_gpt":0.22184604464153473,"score_spread":0.2171871615302239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114791730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99795854,0.00026565904,0.000028193519,0.0003444443,0.0010318268,0.00016453609,0.000054430155,0.00001434721,0.00013801295],"genre_scores_gemma":[0.9994862,0.00014464026,0.000002604066,0.0001288298,0.00021020789,0.0000032689372,0.0000032818034,0.0000070010083,0.000013976183],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998592,0.0007871802,0.00031827972,0.000094176154,0.000028127019,0.00018020392],"domain_scores_gemma":[0.99874365,0.00065429555,0.00022933424,0.00023994785,0.00010228402,0.000030486432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096179586,0.00013984159,0.00021952651,0.00008182325,0.00027447313,0.00004575808,0.00023276023,0.00012894193,0.0004236563],"category_scores_gemma":[0.00066415366,0.000067569876,0.00009222562,0.00014511048,0.00028465275,0.00014361777,0.000044515615,0.0007236892,0.000003398689],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009099943,0.0002941151,0.5782603,0.000014162891,0.00011640204,0.0000026312246,0.00090237724,0.000012122908,0.41638148,0.00032379336,0.0005567558,0.0030448618],"study_design_scores_gemma":[0.00084414164,0.00018602789,0.98552907,0.000012997365,0.00016580356,0.00091312896,0.00020039003,0.0000027363137,0.007914382,0.002616417,0.0015113803,0.00010352182],"about_ca_topic_score_codex":0.00026180304,"about_ca_topic_score_gemma":0.00084824505,"teacher_disagreement_score":0.40846708,"about_ca_system_score_codex":0.000013924024,"about_ca_system_score_gemma":0.00006675659,"threshold_uncertainty_score":0.46387395},"labels":[],"label_agreement":null},{"id":"W2114884395","doi":"10.1007/bf03405553","title":"Meningococcal Serogroup C Conjugate Vaccination in Canada: How Far Have We Progressed? How Far Do We Have to Go?","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Immunization; Vaccination; Meningococcal disease; Meningococcal vaccine; Population; Medicine; Neisseria meningitidis; Geography; Demography; Environmental health; Immunology; Biology","score_opus":0.029956412736794343,"score_gpt":0.26534149215588704,"score_spread":0.2353850794190927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114884395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7837206,0.0022575592,0.000106360734,0.21035187,0.0029847824,0.00038044996,0.00010283714,0.0000100207135,0.00008549975],"genre_scores_gemma":[0.99788904,0.00026032783,0.00012377203,0.00074875465,0.00024078079,0.000017634442,0.00002855593,0.000024753475,0.0006664004],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99786973,0.0003464288,0.0004976357,0.0002375141,0.000047860147,0.0010008514],"domain_scores_gemma":[0.9979433,0.00007175767,0.00041617174,0.00022950486,0.00042962763,0.0009096413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001219605,0.00021972798,0.00047838388,0.00071239116,0.0003170047,0.00022040054,0.0003301034,0.00023821542,0.0005919758],"category_scores_gemma":[0.00036137452,0.00019857236,0.000073615825,0.00030015234,0.000044738932,0.000377732,0.000024138539,0.0009659479,0.000015161122],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006566569,0.00014211032,0.31158537,0.000115049,0.00031533037,0.000111598434,0.004878492,0.000009765973,0.01980681,0.0038949095,0.14036977,0.5187051],"study_design_scores_gemma":[0.0010358345,0.00034112393,0.09555662,0.0000516417,0.0000078553885,0.00043441862,0.0018894561,0.000007757726,0.00038572872,0.00003773454,0.90005827,0.00019353749],"about_ca_topic_score_codex":0.7447905,"about_ca_topic_score_gemma":0.99841595,"teacher_disagreement_score":0.7596885,"about_ca_system_score_codex":0.0013247691,"about_ca_system_score_gemma":0.014983435,"threshold_uncertainty_score":0.9906007},"labels":[],"label_agreement":null},{"id":"W2116060589","doi":"10.4049/jimmunol.177.10.7242","title":"Metalloproteinases Control Brain Inflammation Induced by Pertussis Toxin in Mice Overexpressing the Chemokine CCL2 in the Central Nervous System","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; McGill University; Montreal Neurological Institute and Hospital","funders":"McGill University","keywords":"Neuroinflammation; Chemokine; Perivascular space; Proinflammatory cytokine; Inflammation; Pertussis toxin; Infiltration (HVAC); Pathology; Tissue inhibitor of metalloproteinase; Blood–brain barrier; Parenchyma; Biology; Matrix metalloproteinase; Microglia; Immunology; Central nervous system; Medicine; Endocrinology; Cell biology; Signal transduction","score_opus":0.007045851254973002,"score_gpt":0.209157132766328,"score_spread":0.202111281511355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116060589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872412,0.0040756552,0.00007914873,0.007512215,0.0006516719,0.00030160876,0.0000070021965,0.000010721082,0.000120748075],"genre_scores_gemma":[0.99952364,0.00005727801,0.0000048569705,0.00014613874,0.00014743762,0.000014358107,0.000008821556,0.000010204967,0.000087245535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971306,0.0017213782,0.0006894467,0.00009170523,0.0000335172,0.00033338412],"domain_scores_gemma":[0.99843836,0.0007238572,0.0005378126,0.0002196835,0.0000743805,0.0000058847377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013920933,0.00016321173,0.00035217096,0.0001275289,0.00022289024,0.000037464524,0.0004664088,0.00020631829,0.0000511628],"category_scores_gemma":[0.00016490309,0.000075820746,0.000098718076,0.0002220163,0.00012608395,0.00016560173,0.00004171792,0.000639126,0.000008767461],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005167682,0.00008962023,0.00037882986,0.0000067642695,0.00011842256,0.0000031810418,0.0006693166,0.000058894904,0.99529725,0.0004329512,0.00074913015,0.0016788504],"study_design_scores_gemma":[0.010709725,0.0008717488,0.310113,0.00032408297,0.00028140374,0.00409135,0.007459473,0.000055913046,0.6444786,0.0003732122,0.020857288,0.0003841855],"about_ca_topic_score_codex":0.0029498695,"about_ca_topic_score_gemma":0.0004877749,"teacher_disagreement_score":0.35081866,"about_ca_system_score_codex":0.00010912941,"about_ca_system_score_gemma":0.000055008153,"threshold_uncertainty_score":0.445934},"labels":[],"label_agreement":null},{"id":"W2116400734","doi":"10.1503/cmaj.050105","title":"Bordetella pertussis: the intersection of genomics and pathobiology","year":2005,"lang":"en","type":"review","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Poultry Industry Council","keywords":"Bordetella pertussis; Whooping cough; Incidence (geometry); Disease; Genomics; Medicine; Bordetella; Genome; Immunology; Biology; Vaccination; Genetics; Bacteria; Gene; Pathology","score_opus":0.013754753286778271,"score_gpt":0.2637152746973883,"score_spread":0.24996052141061004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116400734","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014836658,0.9941624,0.000004929755,0.0010271984,0.002796832,0.00012915913,0.000066723274,0.0000061711253,0.00032291486],"genre_scores_gemma":[0.00067712023,0.9976029,0.000005305576,0.00026513744,0.0009777575,0.000007831339,0.00003884332,0.000013443025,0.0004116683],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984114,0.0005615699,0.00059464487,0.00012816193,0.000034084525,0.0002701367],"domain_scores_gemma":[0.9988102,0.00028740618,0.0005379011,0.00009353693,0.00014482722,0.00012615586],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010585986,0.00015901942,0.00063376146,0.00014345921,0.00027052112,0.000029265513,0.00018683099,0.0011659119,0.0025544309],"category_scores_gemma":[0.00055968703,0.0000982159,0.00021142812,0.00011067937,0.000075120726,0.000033855296,0.00002741356,0.0011914565,0.000093075985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000017177039,0.000008239489,0.00004841229,0.000060877363,0.00030509415,0.000001927381,0.00007843684,2.7398103e-8,0.000007594528,0.000080560596,0.0105609195,0.9888462],"study_design_scores_gemma":[0.00017225082,0.000044575914,0.000094183124,0.00043568798,0.00021208248,0.0017799324,0.00008056174,5.138055e-7,8.8951043e-7,0.000010462529,0.99707574,0.00009312176],"about_ca_topic_score_codex":0.0010445947,"about_ca_topic_score_gemma":0.011642127,"teacher_disagreement_score":0.9887531,"about_ca_system_score_codex":0.0005714622,"about_ca_system_score_gemma":0.0018366104,"threshold_uncertainty_score":0.99835736},"labels":[],"label_agreement":null},{"id":"W2117319600","doi":"10.1146/annurev.biochem.75.103004.142545","title":"Biosynthesis and Assembly of Capsular Polysaccharides in <i>Escherichia coli</i>","year":2006,"lang":"en","type":"review","venue":"Annual Review of Biochemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":995,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Escherichia coli; Cell envelope; Biosynthesis; Bacteria; Bacterial capsule; Polysaccharide; Bacterial cell structure; Bacterial outer membrane; Biology; Cell wall; Glycoconjugate; Microbiology; Biochemistry; Enzyme; Gene; Genetics; Virulence","score_opus":0.01271106028483298,"score_gpt":0.28409495260928974,"score_spread":0.27138389232445675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117319600","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004976334,0.9935916,4.6659017e-7,0.000021714844,0.00012888352,0.00032545443,0.00060722855,0.00001147302,0.0003368091],"genre_scores_gemma":[0.0007086105,0.9986118,0.000025425854,0.000023846675,0.000034579956,0.00004028009,0.00026559673,0.000023031878,0.00026683873],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982061,0.00015464654,0.0010786675,0.00033002126,0.000022072683,0.00020852075],"domain_scores_gemma":[0.99862033,0.00015584697,0.0007265613,0.0003695073,0.00010900783,0.000018725244],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034386874,0.0003477933,0.0022303478,0.000090044974,0.000026135906,0.0000042950733,0.00022205058,0.00055132975,0.000117973446],"category_scores_gemma":[0.00020645575,0.0002769432,0.00037685086,0.00033543888,0.00013985416,0.00004078036,0.00010200559,0.00026198363,0.000011564088],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008430587,0.00024649638,0.000017187669,0.36432108,0.0003458606,0.0000019417453,0.000012338871,5.0791016e-9,0.1754939,0.000029329585,0.005705025,0.4538184],"study_design_scores_gemma":[0.00011709282,0.00003515844,0.000009471437,0.09222054,0.0006038002,0.00003793349,0.000012332195,6.5115366e-9,0.067939274,0.0000020825537,0.8387882,0.00023407575],"about_ca_topic_score_codex":0.00031924024,"about_ca_topic_score_gemma":0.0000052459936,"teacher_disagreement_score":0.8330832,"about_ca_system_score_codex":0.000023468085,"about_ca_system_score_gemma":0.00017604379,"threshold_uncertainty_score":0.9999683},"labels":[],"label_agreement":null},{"id":"W2118173417","doi":"10.1139/w07-132","title":"Immunochemical studies and genetic background of two<i>Neisseria meningitidis</i>isolates expressing unusual capsule polysaccharide antigens with specificities of both serogroup Y and W135","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Ministry of Health and Long Term Care","funders":"Health Canada; European Commission; Wellcome Trust","keywords":"Neisseria meningitidis; Serotype; Microbiology; Biology; Antiserum; Neisseria; Virology; Neisseriaceae; Antigen; Polysaccharide; Bacteria; Genetics; Antibiotics","score_opus":0.026474336502324024,"score_gpt":0.24339303913743304,"score_spread":0.216918702635109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118173417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9628269,0.036578044,0.000027990707,0.00004565326,0.00037231972,0.00007014656,0.0000628585,0.0000037896643,0.000012300029],"genre_scores_gemma":[0.99789554,0.0012413566,0.00071872136,0.000017179837,0.000057724857,0.0000011263467,0.000008878327,0.000015551837,0.000043894976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885833,0.000119218865,0.0005369439,0.00016814229,0.0000069285725,0.0003104626],"domain_scores_gemma":[0.9990842,0.00009324304,0.00040590586,0.0001241771,0.00022192042,0.00007060858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011548861,0.00019221769,0.0006262046,0.00025229395,0.0002054464,0.000010596469,0.000119824836,0.0001554164,0.000081366445],"category_scores_gemma":[0.000021469681,0.00015143117,0.000060049882,0.000096131334,0.0012151946,0.00009418301,0.00003501987,0.00020476282,9.995869e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009565587,0.000017877648,0.018171856,0.000035521643,0.00043121894,0.000016820934,0.0011443177,0.0000028567779,0.9796224,0.00006667023,0.00027953438,0.00011524515],"study_design_scores_gemma":[0.0022456239,0.0010603784,0.030069664,0.000292236,0.00016754003,0.020325128,0.0033425265,4.8169767e-7,0.9406406,0.00008802217,0.0014914118,0.0002763639],"about_ca_topic_score_codex":0.0027070013,"about_ca_topic_score_gemma":0.0026112865,"teacher_disagreement_score":0.038981803,"about_ca_system_score_codex":0.000031265667,"about_ca_system_score_gemma":0.00027043608,"threshold_uncertainty_score":0.61751837},"labels":[],"label_agreement":null},{"id":"W2118768407","doi":"10.1128/cvi.05675-11","title":"Risk of Invasive Haemophilus influenzae Type b (Hib) Disease in Adults with Secondary Immunodeficiency in the Post-Hib Vaccine Era","year":2012,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"","keywords":"Hib vaccine; Medicine; Haemophilus influenzae; Severe combined immunodeficiency; Immunodeficiency; Primary immunodeficiency; Virology; Disease; Pediatrics; Immunology; Immunization; Microbiology; Biology; Conjugate vaccine; Internal medicine; Genetics; Immune system","score_opus":0.014334352606613799,"score_gpt":0.27833030682219,"score_spread":0.2639959542155762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118768407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98030555,0.017148698,0.0000017905534,0.00089044415,0.0009851692,0.00045984803,0.00005133696,0.000025706859,0.00013143763],"genre_scores_gemma":[0.9953496,0.003999367,0.000019132143,0.00032066976,0.000092781745,0.000037791506,0.00010585823,0.000019308258,0.000055500845],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971183,0.0008821598,0.0010500146,0.0003828347,0.000023740738,0.000542939],"domain_scores_gemma":[0.99774754,0.0011130742,0.00035874487,0.0005595374,0.00017726213,0.00004386419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009396874,0.0002925112,0.0007147499,0.00024273376,0.00014561803,0.0000112815615,0.00033359227,0.00034741117,0.00039132085],"category_scores_gemma":[0.00093013846,0.00018021709,0.00011290215,0.0004743824,0.00019346223,0.00025039498,0.00021062764,0.0011455186,0.00008156643],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0071635563,0.0011761492,0.97611403,0.000045517198,0.00018301496,0.0000063205166,0.0007930687,0.0000031794327,0.0054379725,0.0004561742,0.00016925028,0.008451744],"study_design_scores_gemma":[0.0072733536,0.0016908163,0.9870064,0.00011504817,0.00009933636,0.00009892658,0.00043354707,0.0000016429108,0.00035758788,0.00018315097,0.0025140995,0.0002260748],"about_ca_topic_score_codex":0.0015039534,"about_ca_topic_score_gemma":0.00080405385,"teacher_disagreement_score":0.015044021,"about_ca_system_score_codex":0.000015691006,"about_ca_system_score_gemma":0.00015253821,"threshold_uncertainty_score":0.734904},"labels":[],"label_agreement":null},{"id":"W2118785829","doi":"10.1503/cmaj.060817","title":"Has the change to acellular pertussis vaccine improved or worsened pertussis control?","year":2006,"lang":"en","type":"letter","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Dalhousie University","funders":"Sanofi Pasteur; Sanofi","keywords":"Diphtheria; Medicine; Pertussis vaccine; Virology; Tetanus; Whooping cough; Haemophilus influenzae; Hib vaccine; Immunization; Inactivated Poliovirus Vaccine; Conjugate vaccine; Poliovirus; Vaccination; Pediatrics; Immunology; Microbiology; Antibody; Virus; Biology; Antibiotics","score_opus":0.015770234633369736,"score_gpt":0.2171413824564765,"score_spread":0.20137114782310675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118785829","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058915652,0.0010181325,0.000056465247,0.9844372,0.0074880794,0.00048546444,0.00034150487,0.00004149473,0.00024005197],"genre_scores_gemma":[0.021945802,0.00015614436,0.000013042085,0.92499197,0.022131141,0.00014446337,0.0004749258,0.00007890491,0.030063607],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967859,0.00079576555,0.0007583686,0.00035470375,0.00018918296,0.001116078],"domain_scores_gemma":[0.99777204,0.00054988195,0.0004960579,0.00030239136,0.0005104832,0.00036913806],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.001282284,0.00040731937,0.00070374383,0.00040647175,0.0012774526,0.00029876715,0.0005995129,0.0030745005,0.025721433],"category_scores_gemma":[0.0012801589,0.00024330479,0.0003377927,0.00035335077,0.00004911222,0.0001098876,0.000040655385,0.004237649,0.00096403],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003402005,0.000018555875,0.0010911861,0.000007354665,0.0005348564,0.00015031059,0.0001195625,1.8178059e-7,0.0004395342,0.0000030599529,0.989203,0.008398413],"study_design_scores_gemma":[0.0016945188,0.00014102305,0.0047812127,0.00007832821,0.00020983945,0.00055511785,0.000044693912,0.000008988638,0.000026300546,0.0000108460945,0.9921208,0.00032833833],"about_ca_topic_score_codex":0.02672383,"about_ca_topic_score_gemma":0.10543733,"teacher_disagreement_score":0.0787135,"about_ca_system_score_codex":0.0010707183,"about_ca_system_score_gemma":0.0021429602,"threshold_uncertainty_score":0.99981385},"labels":[],"label_agreement":null},{"id":"W2118831748","doi":"10.1128/cvi.00219-10","title":"Evaluation of Serum Bactericidal Antibody Assays for<i>Haemophilus influenzae</i>Serotype a","year":2010,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Centers for Disease Control and Prevention; Instituto Mexicano del Seguro Social","keywords":"Haemophilus influenzae; Microbiology; Antibody; Haemophilus; Pathogen; Serotype; Biology; Bacteria; Immunology; Antibiotics","score_opus":0.04580730441337162,"score_gpt":0.37351459533495074,"score_spread":0.32770729092157913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118831748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99306905,0.00082634704,0.00006997757,0.0006177176,0.00453232,0.0004929055,0.00006524579,0.000052759664,0.000273653],"genre_scores_gemma":[0.9990299,0.00020429419,0.00013451037,0.00009369689,0.00023096122,0.000045812525,0.00009778577,0.000017577677,0.0001455039],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980494,0.00039608215,0.0008406348,0.0003762467,0.000026879554,0.00031076893],"domain_scores_gemma":[0.9980453,0.0005104604,0.0003051931,0.00039841095,0.0007113177,0.000029283232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00217542,0.00020318275,0.00059670757,0.00011386438,0.00016660165,0.000012598287,0.00018533834,0.0005961791,0.0008168816],"category_scores_gemma":[0.0012436758,0.00016536925,0.00016961379,0.00013602476,0.00020198291,0.00011654628,0.00014190131,0.00053199957,0.000061779654],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004698078,0.00031201864,0.114381485,0.000015105093,0.00043782333,1.705362e-7,0.000031739855,7.125554e-7,0.79353094,0.0012859202,0.00049344916,0.089040816],"study_design_scores_gemma":[0.0070452485,0.0012612441,0.93634135,0.000016250924,0.00041623352,0.000108493114,0.000026749496,0.00005208126,0.020162815,0.0022071563,0.032141153,0.00022121974],"about_ca_topic_score_codex":0.00007298841,"about_ca_topic_score_gemma":0.00012474137,"teacher_disagreement_score":0.82195985,"about_ca_system_score_codex":0.00000657134,"about_ca_system_score_gemma":0.000117899544,"threshold_uncertainty_score":0.894428},"labels":[],"label_agreement":null},{"id":"W2118840292","doi":"10.1542/peds.2013-0745","title":"Health Care Worker Exposures to Pertussis: Missed Opportunities for Prevention","year":2013,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Health Economics","funders":"","keywords":"Medicine; Psychological intervention; Ambulatory; Epidemiology; Infection control; Health care; Electronic health record; Emergency department; Pediatrics; Environmental health; Ambulatory care; Emergency medicine; Intensive care medicine; Internal medicine; Nursing","score_opus":0.05213912529526889,"score_gpt":0.2898087505636684,"score_spread":0.23766962526839952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118840292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98284274,0.0060762744,0.0010831847,0.006492423,0.0020512103,0.00093425857,0.000062722975,0.00011876098,0.0003384285],"genre_scores_gemma":[0.9888904,0.00039190424,0.0007355436,0.0007585581,0.00044497292,0.00040526688,0.00027895332,0.000020601678,0.00807381],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99933803,0.000059831877,0.00020819697,0.00014900207,0.000009850041,0.00023506269],"domain_scores_gemma":[0.999536,0.00006447631,0.00007319465,0.00013300874,0.00015449211,0.000038854665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077203906,0.00010003252,0.00016038946,0.000109776665,0.00020926548,0.000032645552,0.000073030744,0.000110351146,0.00037847203],"category_scores_gemma":[0.00004854685,0.000085295826,0.00007257006,0.00008852201,0.000010482242,0.00008558189,0.000027224534,0.00006154863,0.00015324264],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009580462,0.0001698661,0.009084334,0.00016393012,0.0000661913,1.8065437e-7,0.002296446,0.0000046040295,0.011025467,0.00039617092,0.7866203,0.19007668],"study_design_scores_gemma":[0.0013692782,0.0011880789,0.0422453,0.000027546897,0.00008323973,0.000012467651,0.0063653793,0.0000012790525,0.002124771,0.00020618984,0.94600254,0.00037395625],"about_ca_topic_score_codex":0.0002457582,"about_ca_topic_score_gemma":0.00005657854,"teacher_disagreement_score":0.18970273,"about_ca_system_score_codex":0.00003085428,"about_ca_system_score_gemma":0.00008287347,"threshold_uncertainty_score":0.4144003},"labels":[],"label_agreement":null},{"id":"W2119110794","doi":"10.1099/00221287-148-6-1833","title":"Genetic diversity of three lgt loci for biosynthesis of lipooligosaccharide (LOS) in Neisseria species The GenBank accession numbers for the sequences reported in this paper are AF470655–AF470685.","year":2002,"lang":"en","type":"article","venue":"Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"U.S. Food and Drug Administration","keywords":"Biology; Neisseria; Genetics; Locus (genetics); Neisseria meningitidis; Gene; Horizontal gene transfer; Phylogenetic tree; Neisseria gonorrhoeae; Bacteria","score_opus":0.0447056554893885,"score_gpt":0.24770402411519227,"score_spread":0.20299836862580378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119110794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99444973,0.002591556,0.000070166294,0.0010199024,0.00066495745,0.0007869894,0.0003159379,0.000014354844,0.0000863813],"genre_scores_gemma":[0.9987747,0.0005387669,0.000093630195,0.00009560855,0.000044809767,0.00006854314,0.000040598876,0.000011657893,0.00033168396],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998578,0.00017458481,0.0005898899,0.00031401517,0.000008338981,0.0003351858],"domain_scores_gemma":[0.9982614,0.00076611945,0.00046579982,0.00038232363,0.000115001756,0.000009346035],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003933092,0.00019293626,0.00046840246,0.00013481893,0.00028239575,0.000009198197,0.00044962854,0.00034021714,0.001689153],"category_scores_gemma":[0.00022396618,0.000115229384,0.00017901756,0.00024945533,0.00041809,0.000076344746,0.00020523006,0.00015924497,0.000009525513],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024765177,0.0001147426,0.084084764,0.000043125583,0.00015713564,6.3574043e-7,0.00039649563,0.000018186209,0.9102929,0.00012454137,0.003261753,0.0012580232],"study_design_scores_gemma":[0.002713397,0.00038890963,0.50695354,0.00014579785,0.0002720164,0.00012720177,0.0011559163,0.000045828983,0.44001812,0.00090525503,0.04685427,0.000419761],"about_ca_topic_score_codex":0.0025787635,"about_ca_topic_score_gemma":0.010852293,"teacher_disagreement_score":0.47027484,"about_ca_system_score_codex":0.000039514856,"about_ca_system_score_gemma":0.000025890708,"threshold_uncertainty_score":0.9992234},"labels":[],"label_agreement":null},{"id":"W2119283188","doi":"10.1503/cmaj.141200","title":"Persistence of specific bactericidal antibodies at 5 years of age after vaccination against serogroup B meningococcus in infancy and at 40 months","year":2015,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Vaccination; Antibody; Persistence (discontinuity); Erythema; Meningococcal vaccine; Group B; Meningitis; Immunology; Pediatrics; Immunization; Internal medicine","score_opus":0.012171859329550349,"score_gpt":0.2232943175546913,"score_spread":0.21112245822514097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119283188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973824,0.0009474304,0.0000013841887,0.000493087,0.00060234556,0.000062362014,0.000029322866,0.0000035571675,0.0004781118],"genre_scores_gemma":[0.99914193,0.0003629615,0.000019108487,0.000088572844,0.000080072416,0.0000028435293,0.000021738555,0.0000053316085,0.0002774608],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991387,0.00014255659,0.00034806516,0.00009492433,0.00007164489,0.000204107],"domain_scores_gemma":[0.9993465,0.000064550695,0.00022058771,0.000056344656,0.00016790052,0.00014410804],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005717468,0.000072598734,0.00021587752,0.00018718588,0.00006331012,0.000011857499,0.00006995426,0.00026162784,0.0009252875],"category_scores_gemma":[0.00028778805,0.0000710105,0.000045253935,0.00012411129,0.000039019968,0.00009943281,0.00003330478,0.00022227806,0.000018498735],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010008,0.000033760356,0.9617364,0.00000950536,0.00007778073,0.000039145627,0.0019293271,0.0000016611671,0.016916232,0.000016657239,0.00507908,0.014060364],"study_design_scores_gemma":[0.0010605027,0.00006363371,0.950347,0.000042379354,0.000009196991,0.00007117683,0.00029546738,0.000003066332,0.00060531456,0.000011011121,0.047421128,0.000070131144],"about_ca_topic_score_codex":0.0010493106,"about_ca_topic_score_gemma":0.029375803,"teacher_disagreement_score":0.04234205,"about_ca_system_score_codex":0.0003915229,"about_ca_system_score_gemma":0.00019766737,"threshold_uncertainty_score":0.999988},"labels":[],"label_agreement":null},{"id":"W2119310382","doi":"10.1086/655826","title":"The Present and Future Control of Pertussis","year":2010,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Sanofi Pasteur; GlaxoSmithKline","keywords":"Medicine; Whooping cough; MEDLINE; Bordetella pertussis; Intensive care medicine; Virology; Vaccination","score_opus":0.013983865118879672,"score_gpt":0.29421208636275326,"score_spread":0.2802282212438736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119310382","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13912901,0.031735353,0.000023647992,0.7962406,0.029420435,0.0011125833,0.0011548261,0.00027174,0.0009118085],"genre_scores_gemma":[0.6525012,0.023865271,0.0000028465197,0.24372338,0.07127034,0.0004336564,0.0010592601,0.00018033524,0.006963669],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981061,0.00053987425,0.0006652742,0.00036435729,0.000023645904,0.00030072566],"domain_scores_gemma":[0.99635965,0.0025045213,0.00039602473,0.0005264381,0.00017519516,0.00003815848],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00021426275,0.0002711572,0.00065367616,0.00005685148,0.00039248812,0.000054380595,0.00020239397,0.0022534244,0.00053091784],"category_scores_gemma":[0.00032668537,0.0001597684,0.00043009684,0.00006705404,0.00079082855,0.000044347144,0.00009755397,0.002734012,0.00006703256],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055387183,0.00018078853,0.030887965,0.00005149535,0.00069406803,0.0000031756047,0.000006929243,6.1874026e-8,0.00024763605,0.00008427085,0.9394368,0.028351404],"study_design_scores_gemma":[0.0011205877,0.00028245483,0.052581377,0.00001795714,0.0004797491,0.000020465517,0.000007678276,6.810162e-7,0.000024481375,0.0002809301,0.9450092,0.00017449491],"about_ca_topic_score_codex":0.000061152045,"about_ca_topic_score_gemma":0.000025499288,"teacher_disagreement_score":0.55251724,"about_ca_system_score_codex":0.000008649484,"about_ca_system_score_gemma":0.00009375908,"threshold_uncertainty_score":0.99956673},"labels":[],"label_agreement":null},{"id":"W2119318184","doi":"10.1128/jb.01927-05","title":"Comparison of the Genome Sequence of the Poultry Pathogen<i>Bordetella avium</i>with Those of<i>B. bronchiseptica</i>,<i>B. pertussis</i>, and<i>B. parapertussis</i>Reveals Extensive Diversity in Surface Structures Associated with Host Interaction","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health; Wellcome Trust; U.S. Department of Agriculture","keywords":"Biology; Bordetella bronchiseptica; Bordetella; Microbiology; Bordetella pertussis; Virulence; Gene; Genetics; Genome; Pathogen; Bacteria","score_opus":0.0223507848325597,"score_gpt":0.26395949373834615,"score_spread":0.24160870890578645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119318184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808896,0.0007321748,0.000016414822,0.00019260989,0.00056477543,0.00021003031,0.00014096634,0.000004515566,0.000049567134],"genre_scores_gemma":[0.9996387,0.0001110005,0.000082323095,0.00005716656,0.000027156711,0.0000011384752,0.0000144279265,0.000011950664,0.00005618068],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979946,0.0007292458,0.0008025833,0.00018431223,0.000058910715,0.00023037066],"domain_scores_gemma":[0.99707127,0.0003845425,0.001828783,0.00026028126,0.00043445523,0.000020646054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003218502,0.00021732328,0.0008428667,0.00009937381,0.00017139145,0.000008058813,0.0003196352,0.000247161,0.00005039025],"category_scores_gemma":[0.0001327123,0.00010925654,0.00015907439,0.00027540998,0.0005777701,0.00013298137,0.00020296453,0.00050737784,3.7934456e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048203464,0.00013013284,0.43820798,0.000014989141,0.00013070066,0.0000010728878,0.00032381085,0.00018268265,0.5604085,0.000040923143,0.00002988997,0.000047316975],"study_design_scores_gemma":[0.0013689315,0.00075524644,0.95727783,0.00021729888,0.00019965251,0.00026418577,0.0005202927,0.0000031573175,0.0388893,0.00007219512,0.0003050573,0.00012684311],"about_ca_topic_score_codex":0.00051359786,"about_ca_topic_score_gemma":0.00027428288,"teacher_disagreement_score":0.5215192,"about_ca_system_score_codex":0.00006198032,"about_ca_system_score_gemma":0.00011825239,"threshold_uncertainty_score":0.44553524},"labels":[],"label_agreement":null},{"id":"W2119590699","doi":"10.1128/jcm.02134-06","title":"Genetic and Antigenic Analysis of Invasive Serogroup Y <i>Neisseria meningitidis</i> Isolates Collected from 1999 to 2003 in Canada","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"National Institutes of Health; Health Canada; European Commission; Wellcome Trust","keywords":"Neisseria meningitidis; Serotype; Biology; Multilocus sequence typing; Serology; Typing; Microbiology; Meningococcal disease; Virology; Neisseriaceae; Antigen; Genotype; Neisseria; Bacteria; Genetics; Antibiotics; Gene; Antibody","score_opus":0.016521610307014933,"score_gpt":0.2882511514881364,"score_spread":0.27172954118112147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119590699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958881,0.0022732313,0.00008790973,0.00011709938,0.0013658111,0.00012274859,0.00012453175,0.0000034261247,0.00001713682],"genre_scores_gemma":[0.9985763,0.00053679245,0.0004947999,0.00023585964,0.00006711171,9.4790903e-7,0.00004243952,0.000008938571,0.000036810397],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99710023,0.00037273465,0.0019714679,0.00023400533,0.00000842418,0.00031311304],"domain_scores_gemma":[0.9972499,0.0013354011,0.00081810856,0.000161609,0.00036039032,0.00007456517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073188177,0.00016296131,0.0012289379,0.00043128658,0.00004788638,0.0000067582787,0.00019297603,0.0003095981,0.0003794248],"category_scores_gemma":[0.0007498163,0.00013376094,0.00017269237,0.0010937115,0.00010271682,0.000041022835,0.00007426304,0.00037512602,0.000005118681],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006410521,0.00007958524,0.4179394,0.0000027920526,0.0012331422,0.0000057975913,0.00005175488,0.0000165334,0.57829547,0.0000034033908,0.0010404442,0.00069064565],"study_design_scores_gemma":[0.001673108,0.0007142747,0.95380825,0.0000374224,0.00054549874,0.000112239126,0.00017018006,0.0000021526332,0.035467908,0.00001953348,0.007302582,0.00014682485],"about_ca_topic_score_codex":0.24008921,"about_ca_topic_score_gemma":0.870856,"teacher_disagreement_score":0.63076675,"about_ca_system_score_codex":0.00006717594,"about_ca_system_score_gemma":0.0007315662,"threshold_uncertainty_score":0.7649711},"labels":[],"label_agreement":null},{"id":"W2119904091","doi":"10.1128/cmr.00040-10","title":"Review and International Recommendation of Methods for Typing Neisseria gonorrhoeae Isolates and Their Implications for Improved Knowledge of Gonococcal Epidemiology, Treatment, and Biology","year":2011,"lang":"en","type":"review","venue":"Clinical Microbiology Reviews","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":148,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Centers for Disease Control and Prevention; Universitetssjukhuset Örebro","keywords":"Neisseria gonorrhoeae; Multilocus sequence typing; Typing; Gonorrhea; Biology; Pulsed-field gel electrophoresis; Molecular epidemiology; Genotype; Genetics; Antibiotic resistance; Neisseriaceae; Epidemiology; Housekeeping gene; DNA sequencing; Microbiology; Medicine; Virology; Antibiotics; Gene","score_opus":0.43281551967048426,"score_gpt":0.5565023697780884,"score_spread":0.12368685010760416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119904091","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000040898343,0.99069804,0.0023824756,0.0003078532,0.0010322357,0.003698446,0.001806367,0.000016096485,0.000017567661],"genre_scores_gemma":[0.0000045250094,0.99132705,0.0039740256,0.00014663489,0.00009488134,0.001058178,0.0032701374,0.000030613453,0.00009398416],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9938952,0.0022359248,0.002818002,0.00075920473,2.202006e-8,0.00029165132],"domain_scores_gemma":[0.99110514,0.0061356076,0.0021449102,0.00037267653,0.00019714046,0.000044507527],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0030890626,0.00049705605,0.0048149284,0.00014263204,0.00011335955,0.000003831675,0.00022858546,0.0010750463,0.00006930352],"category_scores_gemma":[0.0023990655,0.00031547784,0.0007393173,0.00009873568,0.00065947516,0.000049644248,0.00020849101,0.00025930203,0.0000043211026],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036585494,0.00011269796,0.0001310375,0.006096745,0.00079220557,6.5064044e-12,0.000013275121,2.466521e-10,0.005027354,0.0007707345,0.0008272402,0.9861921],"study_design_scores_gemma":[0.0007372854,0.0010785958,0.00004312764,0.002674357,0.0018245961,0.000092584196,0.0000032120574,7.482191e-7,0.0000036020997,0.000714674,0.99258536,0.00024184496],"about_ca_topic_score_codex":0.000017890912,"about_ca_topic_score_gemma":0.000017235543,"teacher_disagreement_score":0.9917581,"about_ca_system_score_codex":0.00003149435,"about_ca_system_score_gemma":0.00010528782,"threshold_uncertainty_score":0.9999297},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"design_other","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"split"},{"id":"W2120093319","doi":"10.1093/gbe/evr119","title":"Extensive Genomic Variation within Clonal Complexes of Neisseria meningitidis","year":2011,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Toronto Public Health; Public Health Agency of Canada; Mount Sinai Hospital","funders":"Sanofi Pasteur; Public Health Agency of Canada","keywords":"Biology; Neisseria meningitidis; Genetics; Genome; Multilocus sequence typing; Gene; Virulence; Homologous recombination; Genome evolution; Population; Genotype; Bacteria","score_opus":0.021716580224795567,"score_gpt":0.2310368117292074,"score_spread":0.20932023150441184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120093319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566257,0.0015041756,0.0015359102,0.00002816542,0.00077815395,0.00011283515,0.00005395042,0.000030955594,0.0002933086],"genre_scores_gemma":[0.9992657,0.000055939414,0.0003205758,0.000015286498,0.000052054027,0.0000096119475,0.0001533511,0.000005887048,0.00012164671],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992845,0.000114336995,0.00024641113,0.00019180366,0.0000036437789,0.00015929673],"domain_scores_gemma":[0.9996069,0.00002529536,0.00015810796,0.000110901914,0.000085123924,0.000013640555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015501784,0.00010523043,0.00019588548,0.0000748195,0.00016055348,0.0000026124042,0.00005784418,0.00021656888,0.00050605205],"category_scores_gemma":[0.000022486263,0.00009230238,0.00003795771,0.00006729633,0.0001688906,0.00006397894,0.00004657611,0.000085493826,0.000059490616],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018949792,0.000040449722,0.025579035,0.0000065373897,0.00009370296,7.337009e-8,0.00062334095,0.000001750754,0.951481,0.021830998,0.000034797973,0.000118848584],"study_design_scores_gemma":[0.0005144553,0.00035672917,0.9761865,0.0000051344555,0.000046376725,0.00006331316,0.00013469868,0.000004961554,0.015192458,0.0060990066,0.0012805446,0.00011578062],"about_ca_topic_score_codex":0.0005957851,"about_ca_topic_score_gemma":0.00004293515,"teacher_disagreement_score":0.9506075,"about_ca_system_score_codex":0.00002261836,"about_ca_system_score_gemma":0.000027264216,"threshold_uncertainty_score":0.5540915},"labels":[],"label_agreement":null},{"id":"W2120799817","doi":"10.1007/s40273-013-0057-2","title":"The Cost and Public Health Burden of Invasive Meningococcal Disease Outbreaks: A Systematic Review","year":2013,"lang":"en","type":"review","venue":"PharmacoEconomics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; Toronto Public Health","funders":"Canadian Institutes of Health Research; GlaxoSmithKline","keywords":"Public health; Health economics; Outbreak; Quality of Life Research; Health administration; Meningococcal disease; Medicine; Disease burden; Burden of disease; Disease; Environmental health; Quality-adjusted life year; Neisseria meningitidis; Cost effectiveness; Virology; Risk analysis (engineering); Nursing","score_opus":0.06974240109637254,"score_gpt":0.3583605125611188,"score_spread":0.28861811146474625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120799817","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000043190383,0.99353206,0.0000027056155,0.0007694068,0.00080854254,0.0045021074,0.00027474275,0.000026078684,0.000041193598],"genre_scores_gemma":[0.00004312107,0.9976108,0.0000030714837,0.00021742842,0.000089583344,0.0013899937,0.00024943048,0.000034503657,0.00036207636],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972253,0.0007949071,0.0013136704,0.0002971251,0.000009576468,0.00035941077],"domain_scores_gemma":[0.9972753,0.00073635095,0.001383184,0.00041972776,0.00007060719,0.0001148202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077377545,0.00035113323,0.0023479844,0.00008906353,0.00025466815,0.00007002163,0.0003589261,0.0001262408,0.0002449292],"category_scores_gemma":[0.00025459033,0.00021519794,0.00033938282,0.00007950411,0.00013361701,0.000114757626,0.00019225632,0.00030497703,0.0003474033],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000436497,0.000037264566,0.000001843813,0.82137626,0.001147132,2.1772077e-7,0.00004889211,5.710991e-8,0.0000116366855,0.00038849682,0.008738589,0.16824523],"study_design_scores_gemma":[0.00022449777,0.00002270742,3.648331e-7,0.0871716,0.0013152899,0.000058400612,0.000031576204,0.0000010222797,0.0000015643692,0.0000070872893,0.9109829,0.00018299364],"about_ca_topic_score_codex":0.00014894777,"about_ca_topic_score_gemma":0.000011795728,"teacher_disagreement_score":0.9022443,"about_ca_system_score_codex":0.00011783468,"about_ca_system_score_gemma":0.0005250818,"threshold_uncertainty_score":0.87755173},"labels":[],"label_agreement":null},{"id":"W2120966637","doi":"10.1046/j.1432-1033.2003.03535.x","title":"Identification of a novel inner‐core oligosaccharide structure in <i>Neisseria meningitidis</i> lipopolysaccharide","year":2003,"lang":"en","type":"article","venue":"European Journal of Biochemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Heptose; Neisseria meningitidis; Residue (chemistry); Chemistry; Lipopolysaccharide; Oligosaccharide; Epitope; Inner core; Microbiology; Neisseriaceae; Biochemistry; Stereochemistry; Antigen; Bacteria; Biology; Antibiotics; Materials science","score_opus":0.012970573155454732,"score_gpt":0.2352606070570029,"score_spread":0.22229003390154817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120966637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796456,0.0007074853,0.00016871527,0.000040181858,0.0006899117,0.000039825918,0.00003797183,0.000007681324,0.00034366813],"genre_scores_gemma":[0.9994756,0.0000464732,0.00015799212,0.000014592098,0.00007448225,4.199277e-7,0.000013573167,0.000016669084,0.0002002295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987984,0.000108944565,0.0007767851,0.00013881184,0.000020452704,0.00015664517],"domain_scores_gemma":[0.99892074,0.000028342374,0.000670898,0.00019954938,0.00015444063,0.000026003638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005173304,0.00013423477,0.00024121859,0.00011306509,0.000047114023,0.000016610391,0.00020916866,0.00007886635,0.00023181815],"category_scores_gemma":[0.00024162042,0.000118409924,0.000094518466,0.00015274757,0.00006041422,0.00008943867,0.00002820672,0.0002983645,0.000008050615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062350504,0.000112351765,0.0014165925,0.000025300793,0.000058280068,0.000004063168,0.00011707305,0.000014068573,0.99738985,0.00013398689,0.00033114944,0.00033495022],"study_design_scores_gemma":[0.0011649241,0.00006371104,0.0026597881,0.00008511502,0.000029743554,0.00062258344,0.0001801137,8.5295596e-7,0.99350166,0.000031699117,0.0015521487,0.00010764933],"about_ca_topic_score_codex":0.000006803736,"about_ca_topic_score_gemma":0.0000018911475,"teacher_disagreement_score":0.003888162,"about_ca_system_score_codex":0.000025325964,"about_ca_system_score_gemma":0.00006602942,"threshold_uncertainty_score":0.48286164},"labels":[],"label_agreement":null},{"id":"W2121414998","doi":"10.1017/s0950268814000405","title":"A review of invasive<i>Haemophilus influenzae</i>disease in the Indigenous populations of North America","year":2014,"lang":"en","type":"review","venue":"Epidemiology and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; National Research Council Canada; Fraser Health; Public Health Agency of Canada","funders":"Centers for Disease Control and Prevention; Public Health Agency; Public Health Agency of Canada","keywords":"Epidemiology; Indigenous; Haemophilus influenzae; Disease; Carriage; Hib vaccine; Vaccination; Population; Medicine; Disease Eradication; Incidence (geometry); Environmental health; Conjugate vaccine; Immunization; Immunology; Biology; Immune system; Microbiology; Pathology","score_opus":0.07511628335037844,"score_gpt":0.3563855915941013,"score_spread":0.28126930824372287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121414998","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008108125,0.9901666,0.000038013637,0.00007423287,0.00056006195,0.00088696054,0.00008522816,0.000016591152,0.0000642003],"genre_scores_gemma":[0.0015003171,0.9968033,0.000014045719,0.00056320545,0.00007110594,0.00017513178,0.00084338,0.000013633376,0.000015869335],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9947743,0.0032171605,0.0014499298,0.00030077656,0.000011609791,0.00024621154],"domain_scores_gemma":[0.9964931,0.001640265,0.0013395427,0.0004170867,0.0000854996,0.000024496607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013311168,0.0002910464,0.0022121647,0.000288195,0.00014078061,0.0000018477217,0.00015430433,0.0003628427,0.00008467644],"category_scores_gemma":[0.0027444449,0.00018816847,0.00038612573,0.00048887025,0.00028111823,0.00006616059,0.00006389196,0.0005089768,0.000039104805],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003786651,0.00029872567,0.07980407,0.098596364,0.0003458954,7.714375e-7,0.0001645752,0.000010548252,0.000005183519,0.0008328962,0.0038993398,0.81600374],"study_design_scores_gemma":[0.00015788968,0.0002074234,0.048491195,0.01750686,0.0007422794,0.00006660871,0.0000015181562,2.13087e-7,4.914492e-7,0.0002465725,0.9324124,0.00016656419],"about_ca_topic_score_codex":0.0014658077,"about_ca_topic_score_gemma":0.00042751493,"teacher_disagreement_score":0.92851305,"about_ca_system_score_codex":0.00002512829,"about_ca_system_score_gemma":0.00014380093,"threshold_uncertainty_score":0.7673288},"labels":[],"label_agreement":null},{"id":"W2121644948","doi":"10.1016/j.ejpn.2006.06.004","title":"Benefit of glucocorticosteroid in the routine therapy of bacterial meningitis in children","year":2006,"lang":"en","type":"review","venue":"European Journal of Paediatric Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Medicine; Observational study; Incidence (geometry); Meningitis; Pediatrics; Bacterial meningitis; Intensive care medicine; Internal medicine","score_opus":0.018864301051533975,"score_gpt":0.2524591935057908,"score_spread":0.23359489245425685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121644948","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43360075,0.56514776,0.0000014197115,0.00002491948,0.0008726893,0.00023185756,0.000036097823,0.0000027097897,0.00008180261],"genre_scores_gemma":[0.11797898,0.88132143,0.00000744776,0.000020802268,0.0005530625,0.0000032609782,0.00006363527,0.000038442337,0.000012907741],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942822,0.0030441864,0.0021440738,0.00021098166,0.00003664474,0.00028193608],"domain_scores_gemma":[0.9969284,0.00040079892,0.0022875955,0.0002846848,0.000083999614,0.000014505274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013549376,0.00030789798,0.0016205482,0.00079094333,0.000027956636,0.00000973396,0.0006556368,0.00020731043,0.00015548841],"category_scores_gemma":[0.00008865731,0.00019657837,0.0004694907,0.00052415807,0.000098893644,0.000058914557,0.000094598836,0.00093733706,0.000013806951],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077132665,0.0011077892,0.030881628,0.00046071815,0.0005229636,0.00016307898,0.00028975218,0.000017090784,0.002682598,0.00006358369,0.0012700725,0.9617694],"study_design_scores_gemma":[0.006363663,0.0043966393,0.19761625,0.00051215483,0.00048668802,0.006084672,0.000008075253,7.365398e-8,0.000092660615,0.000022794611,0.78405344,0.00036285588],"about_ca_topic_score_codex":0.0000664926,"about_ca_topic_score_gemma":0.000016695589,"teacher_disagreement_score":0.9614065,"about_ca_system_score_codex":0.000012137186,"about_ca_system_score_gemma":0.00008541747,"threshold_uncertainty_score":0.80162334},"labels":[],"label_agreement":null},{"id":"W2121733290","doi":"10.1016/s1473-3099(11)70025-1","title":"Glycerol in bacterial meningitis: one strike and out?","year":2011,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Dexamethasone; Medicine; Meningitis; Scopus; Pediatrics; Bacterial meningitis; Internal medicine; MEDLINE; Biology","score_opus":0.029778063740014585,"score_gpt":0.2439937244149918,"score_spread":0.21421566067497722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121733290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9076476,0.005641181,0.00001235967,0.067628846,0.009579083,0.0012174465,0.0017320274,0.0007472612,0.0057941736],"genre_scores_gemma":[0.9066958,0.0022912861,0.0000044026965,0.07274227,0.01263159,0.00047004156,0.0022224737,0.00013871763,0.0028034144],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99831855,0.000387226,0.00032974366,0.00039809424,0.000023405357,0.0005429582],"domain_scores_gemma":[0.99902064,0.00021299778,0.00019939491,0.0004981757,0.000047829144,0.000020961377],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012025742,0.00036275873,0.00075376057,0.00016262673,0.00022468658,0.00008953562,0.00025414527,0.0006868197,0.0020816317],"category_scores_gemma":[0.00008012837,0.00027027665,0.00011791645,0.00010242929,0.00021028757,0.000108531516,0.00016201037,0.001131493,0.0003189231],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004032661,0.00022467616,0.018785331,0.00015931767,0.00064759573,0.000024200952,0.0003276313,4.877536e-7,0.005755446,0.00015996415,0.9705026,0.0030094844],"study_design_scores_gemma":[0.002871675,0.00028195328,0.027317494,0.00015609893,0.0003729968,0.00011336094,0.000014319297,1.9965435e-7,0.00043680726,0.0014248737,0.9665353,0.00047495431],"about_ca_topic_score_codex":0.0007732901,"about_ca_topic_score_gemma":0.00036590986,"teacher_disagreement_score":0.008532164,"about_ca_system_score_codex":0.000049245427,"about_ca_system_score_gemma":0.000060142323,"threshold_uncertainty_score":0.99997497},"labels":[],"label_agreement":null},{"id":"W2122083701","doi":"10.1177/2051013614557477","title":"Prevention of rare diseases: how revolutionary techniques can help vulnerable individuals—the example of serogroup B meningococcal infection","year":2014,"lang":"en","type":"review","venue":"Therapeutic Advances in Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meningococcal Infections; Neisseria meningitidis; Intensive care medicine; Virology; Meningococcal disease; Biology","score_opus":0.03177383989131135,"score_gpt":0.32759353671012936,"score_spread":0.29581969681881803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122083701","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009465265,0.99642843,0.00054457755,0.00017072195,0.0005826515,0.0011228118,0.00008755121,0.00008347354,0.000033276687],"genre_scores_gemma":[0.007245018,0.9911684,0.00009011304,0.000036619283,0.00020890943,0.00049781305,0.00038447775,0.000042664233,0.00032598837],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99728626,0.0011918216,0.0008085424,0.00037866077,0.000040391733,0.00029434002],"domain_scores_gemma":[0.99781173,0.00051896734,0.0010040577,0.0005214637,0.00012983651,0.000013951354],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005208212,0.0004025779,0.0014740163,0.00032676602,0.00018201733,0.0000103479415,0.00032137413,0.00047314944,0.00012619587],"category_scores_gemma":[0.00006767692,0.00027136708,0.00036186486,0.00054130534,0.000121610334,0.00023927544,0.00010525635,0.0005468237,0.000004074745],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036966314,0.00021662517,0.0025949578,0.0051771314,0.00034705992,2.236185e-7,0.00006253163,0.000003463488,0.0005422396,0.00095613796,0.00043351972,0.98962915],"study_design_scores_gemma":[0.00036523485,0.0003241337,0.00052013143,0.0031112814,0.0005913475,0.00004063106,0.00001979665,4.5757494e-7,0.00059224403,0.0011212323,0.9930557,0.00025778895],"about_ca_topic_score_codex":0.0003197152,"about_ca_topic_score_gemma":0.00015356058,"teacher_disagreement_score":0.9926222,"about_ca_system_score_codex":0.0000666107,"about_ca_system_score_gemma":0.00010398777,"threshold_uncertainty_score":0.99997383},"labels":[],"label_agreement":null},{"id":"W2122698861","doi":"10.1128/iai.72.5.2837-2842.2004","title":"<i>pagP</i>Is Required for Resistance to Antibody-Mediated Complement Lysis during<i>Bordetella bronchiseptica</i>Respiratory Infection","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; U.S. Public Health Service; Wellcome Trust; U.S. Department of Agriculture","keywords":"Bordetella bronchiseptica; Biology; Microbiology; Respiratory tract; Immune system; Complement system; Antibody; Lipopolysaccharide; Immunology; Respiratory system; Bacteria","score_opus":0.021820910486221853,"score_gpt":0.2924422877915678,"score_spread":0.2706213773053459,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122698861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953369,0.0003073399,0.0014171749,0.00029641707,0.0011294053,0.00064665714,0.00010057925,0.00020321815,0.0005622919],"genre_scores_gemma":[0.9981072,0.0002951966,0.000083799554,0.00045614113,0.00009987748,0.00012125102,0.00018317209,0.00002551968,0.00062781986],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998732,0.00015083083,0.00041347137,0.0003277663,0.00002661785,0.00034934946],"domain_scores_gemma":[0.9991601,0.000082284576,0.00014746921,0.00034189806,0.00020775557,0.000060459348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029493743,0.00024104607,0.00031588346,0.0002517915,0.0009527108,0.000060507668,0.00007196544,0.00020844948,0.00037057433],"category_scores_gemma":[0.00015084776,0.00023991546,0.00013592542,0.0003782389,0.000098616416,0.00020701886,0.00008846825,0.00022756313,0.00018481829],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034207653,0.00028886524,0.016939642,0.000073841686,0.00017197174,2.4037314e-7,0.00028734683,0.000016624703,0.9794148,0.00031810103,0.0012711819,0.0008753002],"study_design_scores_gemma":[0.0037042177,0.0005495519,0.33781958,0.000071587376,0.0000855945,0.000017734112,0.000030926374,7.3815164e-7,0.23379435,0.00017942466,0.4233965,0.00034981448],"about_ca_topic_score_codex":0.0019701186,"about_ca_topic_score_gemma":0.001665088,"teacher_disagreement_score":0.7456204,"about_ca_system_score_codex":0.00013599802,"about_ca_system_score_gemma":0.00005092401,"threshold_uncertainty_score":0.9783469},"labels":[],"label_agreement":null},{"id":"W2122938110","doi":"10.1056/nejm200303063481017","title":"Dexamethasone in Adults with Bacterial Meningitis","year":2003,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Medicine; Dexamethasone; Bacterial meningitis; Meningitis; Microbiology; Intensive care medicine; Internal medicine; Pediatrics","score_opus":0.010091971964984485,"score_gpt":0.23236039270455566,"score_spread":0.22226842073957118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122938110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947436,0.0011970351,0.00013797496,0.0008545976,0.0018630149,0.000057157868,0.0000011395247,0.0000059595222,0.0011395238],"genre_scores_gemma":[0.9984101,0.00020965768,0.00022846933,0.00002962307,0.00075603044,7.660174e-7,0.000005500887,0.000007954531,0.00035191927],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992172,0.00017825686,0.00034286542,0.000081935585,0.000023126526,0.0001566215],"domain_scores_gemma":[0.9994645,0.00014187398,0.00018989206,0.00007859763,0.00008455018,0.000040577415],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00050832675,0.000102146914,0.00032811717,0.00016673004,0.000033162632,0.000004523067,0.000064072825,0.000081292936,0.00229456],"category_scores_gemma":[0.0002638623,0.000059736423,0.000025176705,0.0001419222,0.000057842877,0.000082463135,0.0000052866694,0.0002595422,0.000009114008],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008803065,0.00025848954,0.0437386,0.000033194934,0.00034093927,0.00013752548,0.003716068,0.000016706237,0.7877547,0.001656589,0.011477036,0.14206709],"study_design_scores_gemma":[0.21926306,0.007248943,0.033564623,0.0011953688,0.0001400032,0.011686809,0.00058250286,4.3672563e-7,0.036923908,0.00040320438,0.68873334,0.00025778337],"about_ca_topic_score_codex":0.00025132223,"about_ca_topic_score_gemma":0.00026918855,"teacher_disagreement_score":0.75083077,"about_ca_system_score_codex":0.000018688354,"about_ca_system_score_gemma":0.000080842525,"threshold_uncertainty_score":0.9986175},"labels":[],"label_agreement":null},{"id":"W2123209128","doi":"10.1093/molbev/msq245","title":"Insight into Evolution of Bordetella pertussis from Comparative Genomic Analysis: Evidence of Vaccine-Driven Selection","year":2010,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; Centers for Disease Control and Prevention; Medical Research Council; Public Health Agency; Public Health Agency of Canada","keywords":"Biology; Bordetella pertussis; Selection (genetic algorithm); Positive selection; Evolutionary biology; Convergent evolution; Experimental evolution; Genetics; Computational biology; Virology; Phylogenetics; Gene; Bacteria","score_opus":0.009547886611226493,"score_gpt":0.27319705392539023,"score_spread":0.2636491673141637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123209128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9737708,0.0048643285,0.020688266,0.000060989343,0.00039803126,0.0001363392,0.000020394042,0.000022682394,0.000038143316],"genre_scores_gemma":[0.9992156,0.00009435974,0.0005226662,0.000006382261,0.000031001928,0.000012030924,0.00009732381,0.0000051404404,0.00001546697],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99892426,0.0002719409,0.0003479565,0.00029550475,0.000012694417,0.00014767062],"domain_scores_gemma":[0.99925697,0.000094909155,0.0002437159,0.00019058329,0.00019551783,0.000018330182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013892725,0.00014354226,0.0004021208,0.00031169804,0.00013495614,0.00000423669,0.000095858,0.00038978507,0.00015582472],"category_scores_gemma":[0.00006931195,0.00012558541,0.00012312102,0.00042433795,0.00016331214,0.000085188425,0.000059277965,0.000214571,0.000012514197],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020038214,0.000055424975,0.1966274,0.000008072942,0.0005654652,6.2281075e-8,0.00025137624,0.000054852375,0.7999902,0.0020175688,0.0000147101255,0.00021451051],"study_design_scores_gemma":[0.00052071514,0.0003839007,0.64443564,0.000022284343,0.0006250151,0.000007968119,0.000082537204,0.0005323636,0.35162815,0.0012664796,0.00034640462,0.00014854445],"about_ca_topic_score_codex":0.00396126,"about_ca_topic_score_gemma":0.002260259,"teacher_disagreement_score":0.44836202,"about_ca_system_score_codex":0.00004219493,"about_ca_system_score_gemma":0.000054322158,"threshold_uncertainty_score":0.59882665},"labels":[],"label_agreement":null},{"id":"W2123218183","doi":"10.1007/s00415-005-0061-3","title":"Dexamethasone and prognostic factors in adults with bacterial meningitis","year":2005,"lang":"en","type":"article","venue":"Journal of Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Dexamethasone; Medicine; Placebo; Odds ratio; Meningitis; Confidence interval; Internal medicine; Multivariate analysis; Surgery; Pathology","score_opus":0.00865151234784856,"score_gpt":0.21643881893143282,"score_spread":0.20778730658358427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123218183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982094,0.00025723656,0.000010267888,0.000792373,0.0006075062,0.00007136574,0.0000032367072,0.000007358686,0.000041223426],"genre_scores_gemma":[0.9996156,0.000084393185,0.0000745332,0.000051540574,0.00013705221,0.0000016794785,0.0000032274759,0.00000827559,0.00002370786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99929583,0.0001404311,0.00027778937,0.00010534203,0.0000100276275,0.0001705845],"domain_scores_gemma":[0.9995028,0.00017734643,0.00018825945,0.000057135512,0.00005390263,0.000020599555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010868821,0.00009790368,0.0002541801,0.00016617948,0.00003770756,0.000009300007,0.00006199258,0.0001359224,0.0002614756],"category_scores_gemma":[0.00008575487,0.00006735254,0.00002834278,0.000073205374,0.0000690535,0.00012979965,0.000022566197,0.00030549517,0.000006371841],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039171646,0.00025694148,0.5653083,0.000012928702,0.000107465356,0.000044146993,0.00069541147,0.000018930392,0.42172593,0.0000688613,0.00036789686,0.0074760155],"study_design_scores_gemma":[0.0050043534,0.004600338,0.94702226,0.00004264189,0.000044418823,0.004777338,0.000044142605,0.0000027294025,0.011965473,0.000024331173,0.026344512,0.00012746068],"about_ca_topic_score_codex":0.00003559835,"about_ca_topic_score_gemma":0.00021826093,"teacher_disagreement_score":0.40976048,"about_ca_system_score_codex":0.0000068560767,"about_ca_system_score_gemma":0.000026317666,"threshold_uncertainty_score":0.28629744},"labels":[],"label_agreement":null},{"id":"W2123390762","doi":"10.1093/aje/kws167","title":"Underestimating the Safety Benefits of a New Vaccine: The Impact of Acellular Pertussis Vaccine Versus Whole-Cell Pertussis Vaccine on Health Services Utilization","year":2012,"lang":"en","type":"article","venue":"American Journal of Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Medicine; Vaccination; Incidence (geometry); Pertussis vaccine; Confidence interval; Pediatrics; Relative risk; Population; Immunization; Internal medicine; Immunology; Environmental health; Antibody","score_opus":0.05867549878072689,"score_gpt":0.34940739334992155,"score_spread":0.2907318945691947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123390762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9743552,0.014354721,0.001127706,0.008933537,0.00090061943,0.00021693985,0.000040070932,0.00001329435,0.000057870922],"genre_scores_gemma":[0.9961171,0.0026244454,0.0003357039,0.0004811404,0.0003125298,0.000002888921,0.00004505249,0.000026523483,0.000054604527],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9954956,0.0020100093,0.0016490562,0.0002030256,0.00004149693,0.0006007843],"domain_scores_gemma":[0.9910907,0.004499035,0.003539402,0.0004941592,0.00026230293,0.00011440599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028338982,0.000313133,0.0013713408,0.00020693534,0.00029196162,0.0000057068905,0.0004720887,0.00015532652,0.0004036174],"category_scores_gemma":[0.0010179181,0.00015330229,0.00041830592,0.0005316098,0.00009757841,0.00016705264,0.00010182703,0.00051540195,0.000015464846],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016279116,0.0015889952,0.58326864,0.00019674738,0.0039377147,8.0359086e-7,0.006748233,0.019554116,0.070831865,0.0023690274,0.02523073,0.26999402],"study_design_scores_gemma":[0.007221052,0.012921347,0.9548619,0.00040199165,0.00049891364,0.0004201174,0.0045290864,0.00040428422,0.0038921146,0.00022161285,0.014238162,0.00038942517],"about_ca_topic_score_codex":0.0045037367,"about_ca_topic_score_gemma":0.00016438776,"teacher_disagreement_score":0.37159327,"about_ca_system_score_codex":0.000115587456,"about_ca_system_score_gemma":0.00022250603,"threshold_uncertainty_score":0.6808333},"labels":[],"label_agreement":null},{"id":"W2124590165","doi":"10.1586/14760584.6.1.47","title":"Acellular pertussis vaccines and the role of pertactin and fimbriae","year":2007,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pertactin; Fimbria; Bordetella pertussis; Whooping cough; Medicine; Virology; Microbiology; Immunology; Biology; Pertussis toxin; Vaccination; Internal medicine; Virulence; Bacteria; Gene; Genetics","score_opus":0.02027771943445342,"score_gpt":0.3236266544945525,"score_spread":0.3033489350600991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124590165","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025354247,0.9974483,0.0000029815437,0.00021742826,0.0006083011,0.00109935,0.000031794683,0.000025377843,0.00031292826],"genre_scores_gemma":[0.00011462308,0.99879706,0.000053332642,0.00008650063,0.00020152389,0.0001144494,0.00008985136,0.000045361696,0.00049728056],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973048,0.0005511821,0.0013912189,0.00043554587,0.00003379658,0.00028348085],"domain_scores_gemma":[0.9972696,0.0009235606,0.0009594632,0.00062436395,0.00018961249,0.00003344161],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00086169265,0.0005632089,0.0034976106,0.00019355553,0.00015434105,0.000015943737,0.00032843862,0.00043286337,0.00076945964],"category_scores_gemma":[0.0004341987,0.0002892789,0.0006211799,0.00031095376,0.0001478487,0.000087840424,0.0002490286,0.0003210023,0.000017533703],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055205768,0.00006942326,0.000039934625,0.034554154,0.0005622214,4.2489214e-7,0.00012510995,2.0620763e-9,0.0007991801,0.0005075619,0.0025584446,0.96072835],"study_design_scores_gemma":[0.0007062219,0.00007859351,0.000033818007,0.037651476,0.0009268191,0.00030687609,0.000075778764,1.8153187e-7,0.00039196078,0.000021834161,0.9595326,0.0002737987],"about_ca_topic_score_codex":0.00034738862,"about_ca_topic_score_gemma":0.000018265155,"teacher_disagreement_score":0.9604545,"about_ca_system_score_codex":0.000013050213,"about_ca_system_score_gemma":0.000070396425,"threshold_uncertainty_score":0.99995595},"labels":[],"label_agreement":null},{"id":"W2124836116","doi":"10.1128/mbio.00909-14","title":"Preferential Packing of Acidic Glycosidases and Proteases into <i>Bacteroides</i> Outer Membrane Vesicles","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":274,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Canadian Institutes of Health Research; Directorate for Biological Sciences; Natural Sciences and Engineering Research Council of Canada; Alberta Glycomics Centre; University of Alberta","keywords":"Bacteroides thetaiotaomicron; Bacterial outer membrane; Bacteroides fragilis; Proteases; Bacteroides; Microbiology; Bacteria; Biogenesis; Biology; Proteome; Vesicle; Membrane protein; Bacteroidaceae; Biochemistry; Chemistry; Enzyme; Membrane; Escherichia coli","score_opus":0.010637503654826023,"score_gpt":0.2230418853286689,"score_spread":0.21240438167384287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124836116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871373,0.00026976404,0.0001005075,0.00012801352,0.0004009087,0.00013906334,0.000013004283,0.00004467729,0.00019034135],"genre_scores_gemma":[0.99958134,0.000030349083,0.000043346612,0.000032492462,0.00009023659,0.00001644252,0.000037175243,0.000009655692,0.00015897403],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993943,0.00010137344,0.0001871201,0.00016452443,0.000009908751,0.00014279432],"domain_scores_gemma":[0.99964935,0.000055395674,0.00008440103,0.00015515504,0.000040383762,0.000015311314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008719477,0.00011069994,0.00020247314,0.000055960845,0.00010292753,0.000018806775,0.00006624928,0.00011348117,0.0003002241],"category_scores_gemma":[0.000047505848,0.000089095505,0.000043967073,0.0000452482,0.00013131437,0.00009789329,0.000050912116,0.00008162378,0.000036293197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008621691,0.00005698839,0.0052133678,0.00004864641,0.000052645973,9.965914e-8,0.00015539528,2.5479198e-7,0.98490626,0.0002773073,0.00022351641,0.008979319],"study_design_scores_gemma":[0.0007411391,0.0002095412,0.010106759,0.000051333656,0.000038050315,0.000021599231,0.00004628153,0.0000011813364,0.97023684,0.0002573633,0.01818485,0.00010506672],"about_ca_topic_score_codex":0.0003365347,"about_ca_topic_score_gemma":0.00007992967,"teacher_disagreement_score":0.017961333,"about_ca_system_score_codex":0.000004668891,"about_ca_system_score_gemma":0.0000094201,"threshold_uncertainty_score":0.36332092},"labels":[],"label_agreement":null},{"id":"W2125976458","doi":"10.1194/jlr.m700193-jlr200","title":"A rapid, small-scale procedure for the structural characterization of lipid A applied to Citrobacter and Bordetella strains: discovery of a new structural element","year":2007,"lang":"en","type":"article","venue":"Journal of Lipid Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Citrobacter; Microbiology; Chemistry; Biology; Computational biology; Biochemistry; Enterobacteriaceae; Escherichia coli","score_opus":0.03888679626524281,"score_gpt":0.3267954698206318,"score_spread":0.28790867355538896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125976458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971092,0.00020610633,0.0005925931,0.0007724607,0.0005769345,0.00066059484,0.00004993367,0.0000032996952,0.000028915561],"genre_scores_gemma":[0.998348,0.00013781575,0.0003370271,0.000025850662,0.00076347234,0.000007695739,0.000017151937,0.000013114827,0.00034987583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987252,0.0000842244,0.00063830835,0.00014258469,0.000076456396,0.00033326691],"domain_scores_gemma":[0.9987456,0.0002182706,0.0003491084,0.00018258147,0.00045445064,0.000049940078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012086134,0.00012499637,0.00033270405,0.00028009148,0.00016614105,0.0000445232,0.0002722017,0.0001302605,0.00013031714],"category_scores_gemma":[0.00015381916,0.00007500562,0.00010481325,0.00025292035,0.000120312114,0.00013303877,0.000117836105,0.0003349323,8.1526036e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001961291,0.00003218253,0.0025359683,0.000088817986,0.00018119442,1.5649266e-7,0.001132343,0.0000030626425,0.9744972,0.00019324633,0.00035033142,0.019024203],"study_design_scores_gemma":[0.003260023,0.0021065646,0.4159233,0.00014147154,0.00006748041,0.00014035226,0.0013261929,0.000009727188,0.562318,0.000232917,0.014310612,0.00016329646],"about_ca_topic_score_codex":0.000033284046,"about_ca_topic_score_gemma":0.000065189204,"teacher_disagreement_score":0.41338733,"about_ca_system_score_codex":0.00003350946,"about_ca_system_score_gemma":0.0001812101,"threshold_uncertainty_score":0.30586404},"labels":[],"label_agreement":null},{"id":"W2126122440","doi":"10.1128/iai.01346-09","title":"Substitution of the <i>Bordetella pertussis</i> Lipid A Phosphate Groups with Glucosamine Is Required for Robust NF-κB Activation and Release of Proinflammatory Cytokines in Cells Expressing Human but Not Murine Toll-Like Receptor 4-MD-2-CD14","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Institut National de la Santé et de la Recherche Médicale","keywords":"Lipid A; Proinflammatory cytokine; Bordetella pertussis; TLR4; Biology; Pertussis toxin; HEK 293 cells; CD14; Lipopolysaccharide; Biochemistry; Inflammation; Receptor; Immunology; G protein; Bacteria","score_opus":0.014481499591129422,"score_gpt":0.22678500184110403,"score_spread":0.2123035022499746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126122440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984012,0.00008065346,0.00018653621,0.00007298614,0.0006530484,0.0005061416,0.000031420946,0.000028469285,0.000039523162],"genre_scores_gemma":[0.9993866,0.00019924586,0.00009526179,0.000027718224,0.000052328578,0.000046642177,0.00004656072,0.0000137287725,0.000131904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991139,0.00015562399,0.00036406296,0.0001899682,0.000023580622,0.00015283817],"domain_scores_gemma":[0.99911827,0.000108657216,0.00032501173,0.0002551887,0.00017463058,0.000018233039],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031313713,0.0001681979,0.00026856735,0.00012413465,0.00042471173,0.000021525973,0.00006454403,0.00020672014,0.00006085202],"category_scores_gemma":[0.00009475721,0.000121437566,0.00005540193,0.00016847931,0.00026794878,0.00027313226,0.000060711784,0.00031972036,7.8203936e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006513989,0.0001933536,0.012235704,0.00012694446,0.00003856552,4.253361e-8,0.00033015176,0.000007491731,0.9843559,0.000122007536,0.00007695784,0.0018614717],"study_design_scores_gemma":[0.002080249,0.00026126136,0.068776675,0.00014202902,0.00003603998,0.000018174247,0.00008186197,0.000024415456,0.92421806,0.000017886396,0.004210065,0.00013327472],"about_ca_topic_score_codex":0.0015029045,"about_ca_topic_score_gemma":0.00059414905,"teacher_disagreement_score":0.060137846,"about_ca_system_score_codex":0.000019879935,"about_ca_system_score_gemma":0.000041009527,"threshold_uncertainty_score":0.49520802},"labels":[],"label_agreement":null},{"id":"W2126153104","doi":"10.1002/14651858.cd001478.pub6","title":"Acellular vaccines for preventing whooping cough in children","year":2014,"lang":"en","type":"review","venue":"Cochrane Database of Systematic Reviews","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"National Institutes of Health; National Institute for Health and Care Research","keywords":"Medicine; Blinding; Whooping cough; Adverse effect; Clinical trial; Bordetella pertussis; Pediatrics; Meta-analysis; Pertussis vaccine; Vaccination; Internal medicine; Immunology; Immunization; Antigen","score_opus":0.07169064752013136,"score_gpt":0.359604590039599,"score_spread":0.2879139425194676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126153104","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000051741903,0.98580617,0.0006185303,0.0000035838743,0.0008872762,0.012142595,0.00043754093,0.000027324595,0.000025255482],"genre_scores_gemma":[0.00000989615,0.99209005,0.00025507345,0.0000055893283,0.00016656805,0.0026784749,0.004332203,0.000058659,0.0004034787],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99322873,0.001778932,0.004026741,0.00055801286,0.000028308801,0.00037928886],"domain_scores_gemma":[0.9944618,0.000997919,0.0030529436,0.0013393526,0.00012302907,0.00002496508],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0041831885,0.0006272102,0.00827461,0.00033060933,0.000102409125,0.000028343598,0.0006020581,0.000401986,0.00018421652],"category_scores_gemma":[0.0020880706,0.00041702983,0.0010609225,0.0003358795,0.00003347178,0.0001325093,0.00016273974,0.0002918615,0.00031428845],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000035229168,0.000073963,0.000011600361,0.9791905,0.0003243989,1.7029166e-7,0.000017407165,7.6094956e-8,0.00020208363,0.00014063947,0.0012903992,0.01874521],"study_design_scores_gemma":[0.00042771135,0.000035953482,0.0000013806541,0.6321156,0.0017979363,0.00015368659,0.000005214381,9.2426404e-7,0.00002242798,0.0000032333649,0.3651562,0.00027974785],"about_ca_topic_score_codex":0.00005618934,"about_ca_topic_score_gemma":0.000017159102,"teacher_disagreement_score":0.3638658,"about_ca_system_score_codex":0.000045152457,"about_ca_system_score_gemma":0.00008150084,"threshold_uncertainty_score":0.99982816},"labels":[],"label_agreement":null},{"id":"W2126547155","doi":"10.1016/j.ebiom.2015.02.001","title":"Will Genome Analysis Elucidate Evolution, Global Transmission and Virulence of Neisseria Meningitidis Lineages?","year":2015,"lang":"en","type":"article","venue":"EBioMedicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Virulence; Genome; Biology; Transmission (telecommunications); Genetics; Neisseria; Genome evolution; Virology; Computational biology; Microbiology; Gene; Bacteria; Computer science","score_opus":0.011679350565361632,"score_gpt":0.25861175528265595,"score_spread":0.24693240471729433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126547155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9810225,0.0056570834,0.011982966,0.0005116791,0.00038183556,0.00009421559,0.00006931356,0.000042474185,0.00023797347],"genre_scores_gemma":[0.99904823,0.00014942752,0.00018510448,0.000020335525,0.00006817637,0.0000035942921,0.00017450633,0.0000048805928,0.0003457518],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992456,0.00006748557,0.00029430512,0.00020565062,0.000019117444,0.00016783035],"domain_scores_gemma":[0.99951476,0.000018152463,0.00010207797,0.00017738916,0.00012860536,0.00005902132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002387283,0.000121923265,0.0003373017,0.00016339701,0.00006751252,0.0000053011154,0.00008390141,0.00012327645,0.0003696723],"category_scores_gemma":[0.000037322738,0.00009224008,0.000057179972,0.0007204464,0.0001893748,0.00013234762,0.00003411489,0.00006837067,0.00001846364],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021679082,0.00008927801,0.028763201,0.000021380522,0.000592624,0.0000010495355,0.0002803429,0.000012502774,0.9666018,0.00046742364,0.0005011559,0.0024524909],"study_design_scores_gemma":[0.0073888847,0.0017932517,0.7900723,0.000119120225,0.0024309517,0.0002176063,0.0006643018,0.00016743905,0.030662058,0.0014359832,0.16450405,0.00054403505],"about_ca_topic_score_codex":0.00057117385,"about_ca_topic_score_gemma":0.000022935044,"teacher_disagreement_score":0.9359397,"about_ca_system_score_codex":0.000028333818,"about_ca_system_score_gemma":0.000038388716,"threshold_uncertainty_score":0.40476525},"labels":[],"label_agreement":null},{"id":"W2126676038","doi":"10.5858/2002-126-0173-tuotpa","title":"The use of TaqMan PCR assay for detection of Bordetella pertussis infection from clinical specimens.","year":2002,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Disease Control Laboratory","funders":"","keywords":"TaqMan; Bordetella pertussis; Whooping cough; Microbiology; Polymerase chain reaction; Medicine; Virology; Bordetella bronchiseptica; Real-time polymerase chain reaction; Agar; Biology; Bacteria; Gene","score_opus":0.10022458915633613,"score_gpt":0.26785907442769247,"score_spread":0.16763448527135633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126676038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955941,0.00032639535,0.0005351732,0.00018694198,0.0026612885,0.0004965653,0.000051636976,0.000029062592,0.00011887298],"genre_scores_gemma":[0.9975781,0.00056655915,0.000029033445,0.000016225395,0.00015511391,0.00023183385,0.000016393025,0.00000960386,0.0013971698],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9990126,0.00021689724,0.00042697965,0.00015209871,0.000011935572,0.00017948997],"domain_scores_gemma":[0.9984769,0.00094782596,0.00023201526,0.00021803092,0.00011059175,0.0000145940785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003711135,0.000085466134,0.00021072425,0.000050229217,0.00014878197,0.000014666723,0.000059708054,0.0002027415,0.00011750942],"category_scores_gemma":[0.00062765117,0.000053417105,0.00016815147,0.000093891875,0.00010674361,0.000081757506,0.000026186506,0.000112564216,0.000013384496],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030629607,0.00026730858,0.025213644,0.000008454026,0.0003635328,4.2645595e-8,0.00004465745,0.0000032596113,0.11787755,0.00006447631,0.0046494626,0.8512013],"study_design_scores_gemma":[0.00070142973,0.0001071102,0.505836,0.0000032596022,0.00007363916,0.0000023567752,0.0000067692768,0.000028850392,0.085245274,0.000050847444,0.40788013,0.00006434358],"about_ca_topic_score_codex":0.0005712977,"about_ca_topic_score_gemma":0.00039554964,"teacher_disagreement_score":0.851137,"about_ca_system_score_codex":0.00001590878,"about_ca_system_score_gemma":0.000003897886,"threshold_uncertainty_score":0.21782863},"labels":[],"label_agreement":null},{"id":"W2127105530","doi":"10.1111/j.1524-4733.2006.00113.x","title":"Managing Meningococcal Disease in the United States: Hospital Case Characteristics and Costs by Age","year":2006,"lang":"en","type":"article","venue":"Value in Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Case fatality rate; Emergency medicine; Demographics; Pediatrics; Meningococcal disease; Diagnosis code; Health care; Disease; Demography; Population; Neisseria meningitidis; Environmental health; Internal medicine","score_opus":0.013928945559640518,"score_gpt":0.26037091664314643,"score_spread":0.2464419710835059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127105530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99636817,0.0007770781,0.000024190871,0.0021255256,0.00026573028,0.00028561702,0.00011332749,0.000020693544,0.000019653899],"genre_scores_gemma":[0.9986861,0.00036985666,0.000008974671,0.00024495428,0.00003155343,0.000022326272,0.00057963387,0.000007851491,0.000048759117],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989846,0.00034605723,0.0002615594,0.00015010504,0.000009284313,0.00024841746],"domain_scores_gemma":[0.99963677,0.00014582787,0.00006923582,0.000116384115,0.000010094066,0.000021689108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003280436,0.00009518383,0.00014086095,0.000118630924,0.00013936646,0.000027056447,0.000052196545,0.000053301184,0.00001537503],"category_scores_gemma":[0.000023621049,0.00007361956,0.000014306507,0.00018558338,0.000050141436,0.000041511845,0.000024858948,0.0001912047,0.000006030467],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064180075,0.0029145489,0.9188304,0.00057610427,0.00008018887,0.0024759083,0.010914297,0.00085741456,0.007671356,0.013496712,0.02349674,0.018044507],"study_design_scores_gemma":[0.0058548464,0.000978999,0.8222072,0.00055314146,0.000041555624,0.0009377014,0.0029531904,0.0033145512,0.00013136849,0.0018409197,0.16037941,0.00080709707],"about_ca_topic_score_codex":0.06805296,"about_ca_topic_score_gemma":0.00039807416,"teacher_disagreement_score":0.13688266,"about_ca_system_score_codex":0.000062933446,"about_ca_system_score_gemma":0.000024588688,"threshold_uncertainty_score":0.93815297},"labels":[],"label_agreement":null},{"id":"W2127120795","doi":"","title":"CT scan in children with acute bacterial meningitis: experience from emergency department of a tertiary-care hospital in Karachi, Pakistan.","year":2014,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Emergency department; Computed tomography; Meningitis; Retrospective cohort study; Hydrocephalus; Pediatrics; Medical record; Bacterial meningitis; Emergency medicine; Radiology; Surgery","score_opus":0.0045849252453207074,"score_gpt":0.21247002090355105,"score_spread":0.20788509565823035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127120795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99803984,0.00028727824,0.000010594091,0.00003067913,0.00073630025,0.0006240201,0.00014675179,0.000025147805,0.00009936627],"genre_scores_gemma":[0.99844646,0.000038873033,0.00002602391,0.0000055521623,0.00005636989,0.0010101225,0.00037414537,0.000012292064,0.000030185935],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894965,0.000105939434,0.00032912905,0.00027797537,0.000017855875,0.00031946678],"domain_scores_gemma":[0.9996185,0.000014917194,0.00011509584,0.00020350298,0.000024899495,0.000023140303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000732127,0.00015304505,0.00025028328,0.000093396084,0.000044667733,0.000011446684,0.00014100692,0.000072498384,0.00025827964],"category_scores_gemma":[0.000014344061,0.00012532929,0.00004321807,0.0001249229,0.00005208193,0.00013018488,0.00005705801,0.000106976084,0.00000700316],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013543716,0.00016338525,0.9713878,0.000002737509,0.00012574093,0.0000015558189,0.001061295,9.2687935e-7,0.012313242,0.00002619066,0.000045836674,0.014735867],"study_design_scores_gemma":[0.0017265812,0.00008849421,0.9755108,0.000012435899,0.000027289,0.000013742297,0.00016334958,2.2995562e-7,0.02160786,0.000016412463,0.00067479105,0.00015801832],"about_ca_topic_score_codex":0.0022287336,"about_ca_topic_score_gemma":0.0012560784,"teacher_disagreement_score":0.014577849,"about_ca_system_score_codex":0.000043820706,"about_ca_system_score_gemma":0.000014172375,"threshold_uncertainty_score":0.511078},"labels":[],"label_agreement":null},{"id":"W2127214489","doi":"10.1128/cdli.7.3.390-395.2000","title":"Sequence Variation in the <i>porA</i> Gene of a Clone of <i>Neisseria meningitidis</i> during Epidemic Spread","year":2000,"lang":"en","type":"article","venue":"Clinical and Diagnostic Laboratory Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of New South Wales; World Health Organization","keywords":"Neisseria meningitidis; Biology; Gene; Genetics; Stop codon; Genotype; Neisseriaceae; clone (Java method); Allele; Multilocus sequence typing; Molecular biology; Gel electrophoresis; Bacteria","score_opus":0.02111990662965181,"score_gpt":0.29069168727238354,"score_spread":0.26957178064273174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127214489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949923,0.0038138195,0.000006305858,0.0003357361,0.00048796707,0.0002018008,0.000091467715,0.000018866785,0.00005174408],"genre_scores_gemma":[0.99665093,0.0030640715,0.000036927693,0.000108844506,0.00004116915,0.000033203873,0.000026530151,0.0000083894,0.000029935314],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976278,0.0009821918,0.0009028501,0.00025472676,0.000013596545,0.00021881897],"domain_scores_gemma":[0.995926,0.0033929578,0.0002496992,0.00031765286,0.00009898332,0.000014677475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009911535,0.00014123468,0.00048835145,0.000061969775,0.000080930535,0.0000054154216,0.00018777906,0.00032594334,0.00035815325],"category_scores_gemma":[0.0015923418,0.000103771534,0.00006467924,0.00028467458,0.0005459449,0.000096921074,0.000043532684,0.0003008895,0.000036477475],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006121855,0.0003348807,0.08002359,0.000021434547,0.00009501463,0.0000038248113,0.00030843055,0.000005837954,0.9166672,0.00045611215,0.00006085967,0.0014106042],"study_design_scores_gemma":[0.0024174901,0.00056415045,0.9301843,0.00007453027,0.00006984454,0.000064793465,0.00009533325,0.0000010962892,0.06362174,0.00043946854,0.0023265884,0.00014064921],"about_ca_topic_score_codex":0.00024289564,"about_ca_topic_score_gemma":0.000022822951,"teacher_disagreement_score":0.85304546,"about_ca_system_score_codex":0.0000083187,"about_ca_system_score_gemma":0.000079672376,"threshold_uncertainty_score":0.42316803},"labels":[],"label_agreement":null},{"id":"W2128434231","doi":"10.1128/jcm.00595-10","title":"<i>Bordetella holmesii</i> Bacteremia in Asplenic Children: Report of Four Cases Initially Misidentified as <i>Acinetobacter lwoffii</i>","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ste. Anne's Hospital; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Bacteremia; Fastidious organism; Medicine; Acinetobacter; Microbiology; Asplenia; Virology; Biology; Antibiotics; Immunology; Spleen; Bacteria; Genetics","score_opus":0.03317950427940894,"score_gpt":0.33917178499034817,"score_spread":0.3059922807109392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128434231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99046034,0.0003609277,0.0000075354196,0.00039331985,0.00798016,0.0002137138,0.00006784701,0.000017736455,0.0004984229],"genre_scores_gemma":[0.9977996,0.0003175756,0.00021806765,0.00034607697,0.0006738627,0.0000026988296,0.000081050865,0.000028919454,0.0005321537],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99479556,0.00053928484,0.003774744,0.0004130861,0.000023809054,0.00045352068],"domain_scores_gemma":[0.99508744,0.0014362864,0.0024372821,0.00046255972,0.00049407594,0.00008236552],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0023240407,0.00031692797,0.0015108447,0.00033958105,0.00007127189,0.000022178754,0.0004979389,0.0011558953,0.0015146409],"category_scores_gemma":[0.0027200426,0.00024939084,0.00067364104,0.00023753973,0.00045581307,0.00017886699,0.00015377831,0.0019353443,0.0001539539],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009696844,0.0005090854,0.11913981,0.000012670242,0.00032649844,0.0003130561,0.00002278096,9.117982e-7,0.87229216,0.00004103952,0.0038084,0.0025638817],"study_design_scores_gemma":[0.008555409,0.0026596887,0.49627843,0.00017790294,0.00030117642,0.18949012,0.000039636863,1.2921065e-7,0.19180956,0.00026918613,0.10988042,0.00053832826],"about_ca_topic_score_codex":0.0002070307,"about_ca_topic_score_gemma":0.00043798462,"teacher_disagreement_score":0.6804826,"about_ca_system_score_codex":0.000017974997,"about_ca_system_score_gemma":0.0004090321,"threshold_uncertainty_score":0.9999958},"labels":[],"label_agreement":null},{"id":"W2129552730","doi":"10.1086/509515","title":"Increase in Serogroup C Meningococcal Disease in Canada Is Associated with Antigenic Changes in the Protein Antigens of the ET‐15 Clone of<i>Neisseria meningitidis</i>","year":2006,"lang":"en","type":"letter","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Antigen; clone (Java method); Virology; Microbiology; Serotype; Biology; Neisseriaceae; Meningococcal vaccine; Meningococcal Infections; Immunology; Immunization; Bacteria; Gene; Genetics; Antibiotics","score_opus":0.0067779428141719325,"score_gpt":0.20597377382225576,"score_spread":0.19919583100808383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129552730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97911716,0.001934745,7.513905e-7,0.017574515,0.00025786384,0.0007238366,0.00034905164,0.0000072013095,0.000034901746],"genre_scores_gemma":[0.9935695,0.0001703784,6.944424e-7,0.0059288745,0.00013037339,0.00003947993,0.000083580424,0.000033272725,0.000043847573],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99640703,0.0020378258,0.0008374621,0.00018270232,0.00012045557,0.00041455147],"domain_scores_gemma":[0.9974118,0.000542097,0.0013307877,0.00049071416,0.0001960322,0.000028610255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007169034,0.0003591544,0.0007946694,0.00031460708,0.00012592242,0.000021790227,0.000651594,0.00024270006,0.00009322145],"category_scores_gemma":[0.00027519892,0.00018313348,0.00019367012,0.00074903615,0.00020570024,0.000100332916,0.000111383626,0.0013906934,6.8906706e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007672571,0.00078471703,0.89898664,0.00018190475,0.0005717058,0.0001047499,0.0006642806,0.00023048728,0.028604195,0.00000935678,0.0690442,0.000050521863],"study_design_scores_gemma":[0.0027574606,0.00039254865,0.9884152,0.0014547639,0.00051625125,0.00012308346,0.00020934826,0.0000023740688,0.0026938021,0.0001180938,0.0030121445,0.00030495226],"about_ca_topic_score_codex":0.44627845,"about_ca_topic_score_gemma":0.6209207,"teacher_disagreement_score":0.17464226,"about_ca_system_score_codex":0.0002774845,"about_ca_system_score_gemma":0.0014553098,"threshold_uncertainty_score":0.74679667},"labels":[],"label_agreement":null},{"id":"W2129579907","doi":"10.1093/emboj/19.1.57","title":"Translocation of group 1 capsular polysaccharide to the surface of Escherichia coli requires a multimeric complex in the outer membrane","year":2000,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":153,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada","keywords":"Bacterial outer membrane; Biology; Escherichia coli; Bacterial capsule; Polysaccharide; Microbiology; Secretion; Bacteria; Chromosomal translocation; Inner membrane; Membrane; Membrane protein; Cell biology; Biochemistry; Genetics; Gene; Virulence","score_opus":0.02438062163110392,"score_gpt":0.2616612830854775,"score_spread":0.23728066145437357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129579907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995219,0.0006822702,0.00011483613,0.0033987395,0.0002515688,0.00021562565,0.0000115652665,0.0000052947175,0.000101097925],"genre_scores_gemma":[0.9992057,0.00025668644,0.00007538212,0.00023652871,0.0000608862,0.000005144798,0.000003979684,0.000006879505,0.00014882383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988388,0.00052873156,0.0003664169,0.000075613665,0.000028992868,0.00016148051],"domain_scores_gemma":[0.9994616,0.00012136813,0.00013134189,0.00022728812,0.000048544698,0.000009889056],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008050664,0.00009351006,0.00019487183,0.000036394817,0.00020049854,0.000016578695,0.00035728817,0.000051521194,0.0014402551],"category_scores_gemma":[0.000018425195,0.000043045973,0.00008330719,0.000241413,0.00009507297,0.000063645915,0.000013395672,0.00025984735,0.00003708518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002101723,0.00010902152,0.00018466673,0.000003986079,0.000075677686,4.6771063e-7,0.0042161397,0.0005530057,0.9903668,0.000077298486,0.0006409801,0.0035617922],"study_design_scores_gemma":[0.0073081097,0.0015380193,0.28214937,0.00027506516,0.00043524543,0.001786665,0.00738173,0.00050641125,0.62169135,0.00062357343,0.075681165,0.0006232715],"about_ca_topic_score_codex":0.0013273361,"about_ca_topic_score_gemma":0.00024559227,"teacher_disagreement_score":0.3686754,"about_ca_system_score_codex":0.00001004159,"about_ca_system_score_gemma":0.000023679242,"threshold_uncertainty_score":0.99947256},"labels":[],"label_agreement":null},{"id":"W2129967627","doi":"10.1016/s1473-3099(15)00217-0","title":"Global incidence of serogroup B invasive meningococcal disease: a systematic review","year":2015,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Food and Drug Administration; Public Health Agency of Canada","keywords":"Incidence (geometry); Case fatality rate; Medicine; Outbreak; Neisseria meningitidis; Meningococcal disease; Disease; Vaccination; Disease burden; Epidemiology; Demography; Disease surveillance; Meningococcal vaccine; Environmental health; Immunology; Internal medicine; Virology; Immunization; Biology","score_opus":0.04135428293526616,"score_gpt":0.3351642168853662,"score_spread":0.2938099339501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129967627","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012548435,0.9940915,0.000005521297,0.000038308743,0.0008977174,0.0028671084,0.0014701559,0.00023082655,0.00027338578],"genre_scores_gemma":[0.0008788298,0.9968588,9.919713e-7,0.0001463698,0.00025533608,0.0011538935,0.0005573466,0.000033435936,0.000115013136],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99661255,0.001498628,0.0010177257,0.0003951107,0.00006215948,0.00041385583],"domain_scores_gemma":[0.9968419,0.0005312307,0.0011170343,0.0011508012,0.00026582793,0.000093227805],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005258952,0.000545165,0.004214232,0.000077803095,0.00018716713,0.00004066841,0.00070236856,0.00023199769,0.00022598817],"category_scores_gemma":[0.0013961031,0.00031046598,0.0007968043,0.000628582,0.00022758722,0.00010900292,0.00030641313,0.00028201987,0.0004107077],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027953514,0.00020487398,0.00053094403,0.9745417,0.0013571618,0.000005061906,0.000015210534,6.5387167e-7,0.0000011479511,0.00078952103,0.014010961,0.008514777],"study_design_scores_gemma":[0.00048747673,0.00014055321,0.00013020914,0.57953006,0.01773271,0.0003465786,0.000010472343,1.0998757e-7,3.8781255e-7,0.00036750647,0.40078196,0.0004720105],"about_ca_topic_score_codex":0.000091205904,"about_ca_topic_score_gemma":0.000050591425,"teacher_disagreement_score":0.3950117,"about_ca_system_score_codex":0.00019356472,"about_ca_system_score_gemma":0.0007545806,"threshold_uncertainty_score":0.99993473},"labels":[],"label_agreement":null},{"id":"W2130269245","doi":"10.1128/iai.74.5.2619-2627.2006","title":"Maternal Immunity Provides Protection against Pertussis in Newborn Piglets","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Krembil Foundation; Saskatchewan Health Research Foundation; Bill and Melinda Gates Foundation","keywords":"Colostrum; Bordetella pertussis; Immunity; Vaccination; Immunology; Passive immunity; Antibody; Whooping cough; Biology; Immunization; Pertussis toxin; Humoral immunity; Immune system; Immunoglobulin G; Medicine; Internal medicine; Bacteria","score_opus":0.013704041736883879,"score_gpt":0.2289814340669044,"score_spread":0.21527739233002052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130269245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544036,0.0002600475,0.00017755997,0.0001378127,0.00083108695,0.0003205526,0.0000083537225,0.0001485244,0.0026756746],"genre_scores_gemma":[0.9987713,0.00017980053,0.000020832036,0.00003655087,0.00006781002,0.000068920875,0.00005951222,0.00001354309,0.00078170886],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988722,0.00037024947,0.0003161548,0.00018131957,0.000015031021,0.00024500993],"domain_scores_gemma":[0.9995587,0.000036198624,0.00011004753,0.0002063329,0.00007339789,0.000015360469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028718216,0.00017956433,0.00020989064,0.00024532506,0.00048634305,0.00006979346,0.0000616421,0.0002395866,0.00025140998],"category_scores_gemma":[0.000054631008,0.00016022153,0.000062995525,0.00024067562,0.00009934641,0.0003054861,0.00007145836,0.00047708626,0.00008838081],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001321211,0.00032918865,0.19698304,0.000030060088,0.000032332733,6.375925e-7,0.000097671465,0.000015060117,0.75863075,0.00015166377,0.00018650333,0.043410994],"study_design_scores_gemma":[0.0010741582,0.0001514524,0.9006923,0.00004326924,0.000012296663,0.00008476964,0.00004355395,0.000021669295,0.055056565,0.00022730738,0.042414594,0.00017809695],"about_ca_topic_score_codex":0.06535748,"about_ca_topic_score_gemma":0.0057738395,"teacher_disagreement_score":0.70370924,"about_ca_system_score_codex":0.00007418563,"about_ca_system_score_gemma":0.000028695646,"threshold_uncertainty_score":0.9408664},"labels":[],"label_agreement":null},{"id":"W2130766284","doi":"10.1093/cid/cir836","title":"The Number Needed to Vaccinate to Prevent Infant Pertussis Hospitalization and Death Through Parent Cocoon Immunization","year":2011,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Université Laval; BC Centre for Disease Control; University of British Columbia","funders":"Sanofi Pasteur; Sanofi; GlaxoSmithKline","keywords":"Medicine; Immunization; Pediatrics; Environmental health; Immunology; Antibody","score_opus":0.0396978259972267,"score_gpt":0.33347953423353843,"score_spread":0.2937817082363117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130766284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99490285,0.0005293145,0.0009053495,0.0004149613,0.0018605683,0.00066876697,0.000024785953,0.00015554775,0.00053784705],"genre_scores_gemma":[0.997753,0.0008321083,0.00001654325,0.0007217536,0.00010010908,0.00017769243,0.000056649435,0.000022162254,0.00031996815],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985507,0.00031105304,0.000517175,0.00032969197,0.000021293381,0.00027007103],"domain_scores_gemma":[0.9989271,0.00027337953,0.00013280846,0.00034642036,0.00022680561,0.000093467934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002003415,0.0001899449,0.00027569357,0.000039364113,0.0005538728,0.00006942417,0.0001318267,0.00015983576,0.0005432305],"category_scores_gemma":[0.00075443956,0.00013001687,0.00010782142,0.00023427472,0.00005362649,0.00015588806,0.00018989766,0.00012904749,0.00038971115],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025046716,0.0013595588,0.9734967,0.000019331363,0.00031388647,8.412112e-7,0.0008971014,0.000013069815,0.0009962369,0.004018607,0.008707286,0.009926959],"study_design_scores_gemma":[0.00071799394,0.00067249074,0.96272445,0.00004526357,0.00015002009,0.000008921609,0.000194195,0.00000431597,0.0010993731,0.0012290613,0.03290862,0.00024527506],"about_ca_topic_score_codex":0.00069589657,"about_ca_topic_score_gemma":0.00013238708,"teacher_disagreement_score":0.024201332,"about_ca_system_score_codex":0.00003345473,"about_ca_system_score_gemma":0.000043100932,"threshold_uncertainty_score":0.5947993},"labels":[],"label_agreement":null},{"id":"W2130776958","doi":"10.1128/jcm.06835-11","title":"Invasive Serogroup B Neisseria meningitidis in Québec, Canada, 2003 to 2010: Persistence of the ST-269 Clone Since It First Emerged in 2003","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"National Institutes of Health; European Commission; Wellcome Trust","keywords":"Neisseria meningitidis; Meningococcal disease; Conjugate vaccine; Serotype; Biology; Virology; clone (Java method); Meningococcal vaccine; Genotype; Microbiology; Neisseriaceae; Antibiotics; Bacteria; Genetics; Streptococcus pneumoniae; Gene","score_opus":0.04252769224660971,"score_gpt":0.2974575566253483,"score_spread":0.25492986437873855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130776958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843819,0.0019354032,0.0000044584303,0.0068014124,0.006528205,0.00022263566,0.00006533965,0.000002629947,0.000058029804],"genre_scores_gemma":[0.9978947,0.00032700552,0.00009512586,0.0008404206,0.00015051464,0.0000054182583,0.0000102141885,0.0000116389265,0.0006649804],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99683636,0.00072492013,0.0017628974,0.00019261272,0.000014680854,0.00046853427],"domain_scores_gemma":[0.9977396,0.0006168065,0.0008597824,0.0002581917,0.00045164625,0.00007396161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012559659,0.00018939922,0.00084679376,0.00013167586,0.00008672637,0.0000049323576,0.00042666928,0.00038275382,0.00063045364],"category_scores_gemma":[0.0031653938,0.00013120004,0.00016205947,0.00060620625,0.00018958775,0.00012043389,0.00014173436,0.00075502764,0.00002384546],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000589098,0.00045243083,0.5140261,0.000016741555,0.0001565364,0.0000026328103,0.0003070594,0.000020727217,0.40343684,0.00004306218,0.080683015,0.00026575674],"study_design_scores_gemma":[0.0023481087,0.00061287754,0.68605185,0.00021175231,0.00006550906,0.00038238853,0.000541949,3.9721107e-7,0.016600227,0.0000063076723,0.29295135,0.00022727712],"about_ca_topic_score_codex":0.16151965,"about_ca_topic_score_gemma":0.86011356,"teacher_disagreement_score":0.6985939,"about_ca_system_score_codex":0.00014153487,"about_ca_system_score_gemma":0.0012835856,"threshold_uncertainty_score":0.8440639},"labels":[],"label_agreement":null},{"id":"W2130816712","doi":"10.1128/jcm.41.9.4411-4414.2003","title":"Outbreak of Serogroup C Meningococcal Disease Caused by a Variant of <i>Neisseria meningitidis</i> Serotype 2a ET-15 in a Community of Men Who Have Sex with Men","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Public Health; Ministry of Health and Long Term Care; Health Canada","funders":"","keywords":"Neisseria meningitidis; Serotype; Meningococcal disease; Outbreak; Neisseriaceae; Virology; Microbiology; Biology; Neisseria; Bacteria; Antibiotics; Genetics","score_opus":0.024563489323739997,"score_gpt":0.3169096995533654,"score_spread":0.2923462102296254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130816712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762887,0.00060087413,0.00011908792,0.00021293938,0.00019450384,0.0002553226,0.00018917499,0.000006787388,0.0007924577],"genre_scores_gemma":[0.9991435,0.00017373261,0.00016551865,0.00007209595,0.000023861363,0.000005746841,0.0000586965,0.00002200817,0.00033485706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9939274,0.003166276,0.0023557395,0.000210061,0.000020437774,0.00032007485],"domain_scores_gemma":[0.9959809,0.001186476,0.0019725624,0.00039208963,0.00038334285,0.00008462195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029461016,0.00025870878,0.0016517943,0.000182952,0.00006471641,0.0000061038604,0.0003498442,0.00046150832,0.0002307082],"category_scores_gemma":[0.000624112,0.00018843211,0.00026782497,0.00019636871,0.00051546795,0.00011501696,0.00010942149,0.0010207498,0.0000029318526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033203783,0.0017286381,0.14271992,0.000076490964,0.0007722128,0.0000057506863,0.0005088816,0.000015821986,0.84700805,0.0002631197,0.0034053714,0.00017538382],"study_design_scores_gemma":[0.049164806,0.024554713,0.39383262,0.0016081766,0.0016157562,0.0017943485,0.004733496,0.000026696547,0.47551823,0.00096558995,0.04489486,0.0012906903],"about_ca_topic_score_codex":0.00047551113,"about_ca_topic_score_gemma":0.00022993519,"teacher_disagreement_score":0.3714898,"about_ca_system_score_codex":0.000026322172,"about_ca_system_score_gemma":0.00032876316,"threshold_uncertainty_score":0.7684038},"labels":[],"label_agreement":null},{"id":"W2130850833","doi":"10.1093/jac/45.6.777","title":"A multiplex polymerase chain reaction to differentiate  -lactamase plasmids of Neisseria gonorrhoeae","year":2000,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria gonorrhoeae; Multiplex polymerase chain reaction; Microbiology; Polymerase chain reaction; Plasmid; Neisseriaceae; Biology; Virology; Neisseria; Bacteria; Antibiotics; Genetics; DNA; Gene","score_opus":0.007840798279212916,"score_gpt":0.23551429475771596,"score_spread":0.22767349647850305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130850833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974004,0.000114717746,0.00006592496,0.0009919389,0.0010988362,0.00015070196,0.00003388956,0.000020852667,0.00012271665],"genre_scores_gemma":[0.9974942,0.00044632633,0.0001765698,0.00040390575,0.0002110347,0.000001453124,0.000016494314,0.000028866622,0.001221153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988115,0.00009667643,0.00066002714,0.00016026992,0.000013853719,0.00025767795],"domain_scores_gemma":[0.999201,0.000043077547,0.00038081058,0.00018680307,0.00013617132,0.000052163014],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017125074,0.00020896256,0.0004868334,0.0002396235,0.000098695826,0.00002337644,0.00018182272,0.00019920585,0.002899709],"category_scores_gemma":[0.00001885411,0.00017396848,0.0002557516,0.00021352415,0.000054159667,0.00017160416,0.000013745399,0.00024524186,0.00008383302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030114774,0.00047628715,0.0007190587,0.000012975124,0.00022493472,7.971156e-7,0.0002971083,0.000013085262,0.97141725,0.0000071087534,0.0044761254,0.019343805],"study_design_scores_gemma":[0.0039633736,0.00053584535,0.013280508,0.00009127857,0.00004630079,0.00034051476,0.000032609878,0.0000029247237,0.92188346,0.0000072665493,0.059628468,0.0001874664],"about_ca_topic_score_codex":0.0001963111,"about_ca_topic_score_gemma":0.000024846315,"teacher_disagreement_score":0.05515234,"about_ca_system_score_codex":0.00003747909,"about_ca_system_score_gemma":0.000058449164,"threshold_uncertainty_score":0.99801177},"labels":[],"label_agreement":null},{"id":"W2131063728","doi":"10.1086/428729","title":"Effectiveness of Serogroup C Meningococcal Polysaccharide Vaccine: Results from a Case‐Control Study in Quebec","year":2005,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Jewish General Hospital; McGill University; Centre hospitalier universitaire de Québec; Institut National de Santé Publique du Québec; Université Laval","funders":"GlaxoSmithKline","keywords":"Medicine; Meningococcal disease; Meningococcal vaccine; Neisseria meningitidis; Confounding; Immunization; Neisseriaceae; Immunology; Virology; Environmental health; Microbiology; Internal medicine; Antibiotics; Antibody","score_opus":0.018136616886392867,"score_gpt":0.3233739250895724,"score_spread":0.30523730820317957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131063728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963315,0.0006145517,0.000052755997,0.000058537025,0.0011358912,0.00094749464,0.00063769927,0.00016326946,0.00005827148],"genre_scores_gemma":[0.99938476,0.000027427663,0.000003621092,0.000040447816,0.00027051612,0.00011867347,0.00006295223,0.00002494678,0.000066681336],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99575704,0.0019475081,0.0013038631,0.0006193401,0.000026949709,0.00034530353],"domain_scores_gemma":[0.99475956,0.0042057377,0.00033169275,0.00049777975,0.00012609512,0.00007910567],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00095626,0.00028496332,0.0009116932,0.00018664812,0.00013588203,0.00003255323,0.00016175174,0.00031552528,0.00033613073],"category_scores_gemma":[0.0012886263,0.0002463291,0.00030791957,0.0002974332,0.00010306674,0.0002267956,0.00010286446,0.0004069401,0.00012727633],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027991047,0.006065493,0.9624723,0.000020895704,0.0006901996,0.00006748322,0.00014970201,0.00010064868,0.012766169,0.000047202702,0.00017924201,0.014641555],"study_design_scores_gemma":[0.01994175,0.0011375885,0.97665614,0.000076045064,0.00039184705,0.000042181106,0.00016078645,0.00002007379,0.0008574903,0.00007706275,0.00038295175,0.000256058],"about_ca_topic_score_codex":0.041909803,"about_ca_topic_score_gemma":0.0554223,"teacher_disagreement_score":0.017142646,"about_ca_system_score_codex":0.00008371847,"about_ca_system_score_gemma":0.000106266234,"threshold_uncertainty_score":0.99999887},"labels":[],"label_agreement":null},{"id":"W2131337662","doi":"10.1128/iai.72.5.2742-2752.2004","title":"Engulfment of<i>Neisseria gonorrhoeae</i>: Revealing Distinct Processes of Bacterial Entry by Individual Carcinoembryonic Antigen-Related Cellular Adhesion Molecule Family Receptors","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Neisseria gonorrhoeae; Biology; Carcinoembryonic antigen; Receptor; Microbiology; Antigen; Neisseria; Cell adhesion molecule; Cell biology; Adhesion; Bacteria; Immunology; Biochemistry; Genetics; Chemistry; Cancer","score_opus":0.011180182419319534,"score_gpt":0.2247358860461686,"score_spread":0.21355570362684906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131337662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952048,0.0025690815,0.00008640837,0.000014962391,0.0015465666,0.00024283244,0.00007677558,0.00005851273,0.00020007596],"genre_scores_gemma":[0.99781674,0.0014341114,0.000016230766,0.000007820438,0.000027606919,0.000012465809,0.00059108704,0.000016433576,0.0000774967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987812,0.0002375377,0.00053451164,0.00021234725,0.000018106544,0.00021629815],"domain_scores_gemma":[0.9992061,0.000057624773,0.00032591244,0.00021219341,0.00016887503,0.000029296585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002824649,0.00020800205,0.0003571483,0.00014014651,0.00027988007,0.00002139318,0.00009880532,0.00028390824,0.0003277358],"category_scores_gemma":[0.00011179821,0.00019290375,0.00008548974,0.0003364028,0.00014326542,0.00016420164,0.00009606292,0.00027555443,0.000013653028],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014574776,0.00037299652,0.019817961,0.00011460847,0.00014768958,7.9491336e-8,0.00048700444,0.0000056522376,0.9776173,0.000046308593,0.00017544934,0.0010691859],"study_design_scores_gemma":[0.0019049658,0.00055623206,0.12513244,0.00013290296,0.00008285994,0.00001975976,0.00017768936,3.0265682e-7,0.8647827,0.000046513916,0.006963938,0.00019972175],"about_ca_topic_score_codex":0.0031146358,"about_ca_topic_score_gemma":0.00006162911,"teacher_disagreement_score":0.11283465,"about_ca_system_score_codex":0.000036718546,"about_ca_system_score_gemma":0.00011360841,"threshold_uncertainty_score":0.7866387},"labels":[],"label_agreement":null},{"id":"W2131467929","doi":"","title":"Predicted proteins of Neisseria meningitidis as potential vaccine candidates: from in silico analyses to experimental corroboration","year":2012,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Neisseria meningitidis; Biology; ORFS; Neisseria; In silico; Reverse vaccinology; Microbiology; Genome; Gene; Virulence; Bacterial outer membrane; Escherichia coli; Immunogenicity; Genetics; Peptide sequence; Antigen; Computational biology; Bacteria; Open reading frame","score_opus":0.162919185177162,"score_gpt":0.5329715141141469,"score_spread":0.3700523289369849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131467929","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877489,0.009798292,0.00012542475,0.000049158854,0.0012242993,0.0006383054,0.0001870415,0.000025548183,0.00020299944],"genre_scores_gemma":[0.9988875,0.00041588675,0.00007471811,0.000035747355,0.00014973403,0.00008420641,0.00021947615,0.00002650281,0.0001062731],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981629,0.00032306695,0.0008371686,0.000277835,0.000058490234,0.0003404912],"domain_scores_gemma":[0.998758,0.000084925196,0.00057421543,0.0003022414,0.00018613141,0.00009447803],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036033939,0.00025241377,0.0007072758,0.0006730806,0.00015135614,0.00017331314,0.0006837958,0.00017878495,0.020474581],"category_scores_gemma":[0.00016168831,0.0002223313,0.000114289884,0.00075062684,0.00004039157,0.0015804558,0.00039657377,0.00021835371,0.00003526217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007739289,0.00048981025,0.26385054,0.000008537207,0.00019923545,9.854615e-7,0.00033235448,0.00006638809,0.7305531,0.000007807782,0.003323102,0.00039421523],"study_design_scores_gemma":[0.00075435813,0.000040053623,0.42305332,0.000099617755,0.000058235724,0.000008327429,0.0001889567,0.0000059537815,0.57487845,0.000044102693,0.000724094,0.00014454951],"about_ca_topic_score_codex":0.01537117,"about_ca_topic_score_gemma":0.00037438585,"teacher_disagreement_score":0.15920278,"about_ca_system_score_codex":0.00007462007,"about_ca_system_score_gemma":0.000083073,"threshold_uncertainty_score":0.99118555},"labels":[],"label_agreement":null},{"id":"W2132357248","doi":"10.1128/iai.73.12.8144-8152.2005","title":"Comparative Toll-Like Receptor 4-Mediated Innate Host Defense to<i>Bordetella</i>Infection","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; U.S. Public Health Service; National Institutes of Health","keywords":"Bordetella bronchiseptica; Biology; TLR4; Bordetella pertussis; Microbiology; Innate immune system; Toll-like receptor; Immunology; Immunity; Lipopolysaccharide; Immune system; Bacteria","score_opus":0.020906994479017726,"score_gpt":0.2730964061402077,"score_spread":0.25218941166118997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132357248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99348974,0.000277189,0.00017872282,0.0003238885,0.0022922016,0.00034029008,0.00003488319,0.00026589716,0.0027971661],"genre_scores_gemma":[0.99735105,0.0005700638,0.00004494564,0.00035706093,0.00013094186,0.000045409543,0.00015503749,0.000015908296,0.0013295561],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99873585,0.00035780485,0.0003300423,0.00026094035,0.000019572157,0.00029577594],"domain_scores_gemma":[0.9992662,0.00012411263,0.00011674171,0.00024660106,0.00018613307,0.00006020763],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002780083,0.00023998624,0.0003266647,0.0002577904,0.0006583778,0.00006306293,0.00005858361,0.00026541913,0.001537166],"category_scores_gemma":[0.00008716562,0.00022331625,0.00008312881,0.00039158252,0.00010094517,0.00029015917,0.00009269493,0.0004430227,0.0022479682],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003191476,0.00041444946,0.020276612,0.0000141266255,0.00019157215,1.8211539e-7,0.0010174215,0.000027092843,0.95669365,0.00015772299,0.011304877,0.00958314],"study_design_scores_gemma":[0.0011641477,0.0004627613,0.15534414,0.000024006513,0.00003219058,0.00007863399,0.000060971954,0.000012658509,0.09861986,0.000011391221,0.7438917,0.00029752296],"about_ca_topic_score_codex":0.0031353391,"about_ca_topic_score_gemma":0.0017008374,"teacher_disagreement_score":0.8580738,"about_ca_system_score_codex":0.000079882484,"about_ca_system_score_gemma":0.000031573407,"threshold_uncertainty_score":0.9993756},"labels":[],"label_agreement":null},{"id":"W2132840203","doi":"10.1016/j.amjmed.2009.09.032","title":"Spotted Fever: Meningococcal Disease and Petechiae","year":2010,"lang":"en","type":"article","venue":"The American Journal of Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Alberta","funders":"","keywords":"Medicine; Outbreak; Meningococcal disease; Meningitis; Neisseria meningitidis; Epidemiology; Disease; Dermatology; Pediatrics; Virology; Internal medicine","score_opus":0.006709834828382103,"score_gpt":0.251268495590511,"score_spread":0.2445586607621289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132840203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98717993,0.00046331657,0.000035130255,0.011236367,0.0009588075,0.000040170213,0.0000020729083,0.000009279315,0.00007490807],"genre_scores_gemma":[0.9988348,0.00015492002,0.000042041243,0.0003548536,0.00044141995,9.166107e-7,0.0000015957514,0.0000060287293,0.00016341277],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99950296,0.00009438474,0.00021224326,0.000059398277,0.000017578292,0.00011344678],"domain_scores_gemma":[0.99932235,0.00013813845,0.00028572176,0.00013133633,0.000072500814,0.00004992318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004011397,0.00007793174,0.00024211462,0.00007338153,0.000108343986,0.000004641419,0.00012768497,0.000020271282,0.00043495555],"category_scores_gemma":[0.0001864734,0.000038360133,0.00003591079,0.00010833188,0.00079475285,0.000038146492,0.000027314758,0.00039861738,0.000010840606],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047762392,0.000030104811,0.00790971,0.000002477557,0.0001108166,0.0000048854968,0.0002203215,2.5718072e-7,0.95860314,0.00028392556,0.003624379,0.028732384],"study_design_scores_gemma":[0.0035627368,0.0019924175,0.79949296,0.0000833076,0.0004162154,0.003370777,0.0008908944,0.0000036831216,0.0033314496,0.0008921428,0.18579556,0.00016786862],"about_ca_topic_score_codex":0.00008414598,"about_ca_topic_score_gemma":0.000006846132,"teacher_disagreement_score":0.95527166,"about_ca_system_score_codex":0.0000038748503,"about_ca_system_score_gemma":0.000029790712,"threshold_uncertainty_score":0.47624582},"labels":[],"label_agreement":null},{"id":"W2132911898","doi":"10.1128/jcm.00175-15","title":"Isolation of Bordetella bronchiseptica from Blood and a Pancreatic Abscess","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Bordetella bronchiseptica; Isolation (microbiology); Microbiology; Abscess; Bordetella; Biology; Medicine; Bacteria; Bordetella pertussis; Surgery","score_opus":0.04478583570530669,"score_gpt":0.33657205283244934,"score_spread":0.29178621712714264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132911898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99444044,0.0028604483,0.00020906758,0.00023145173,0.0019730746,0.00006049423,0.000033637043,0.0000065562544,0.00018485238],"genre_scores_gemma":[0.9980401,0.0003980545,0.0010699048,0.000067313755,0.00026947877,5.7553234e-7,0.000019698015,0.000007768373,0.00012714729],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998048,0.0004178777,0.0012468622,0.0001392765,0.000007362834,0.00014058602],"domain_scores_gemma":[0.99786705,0.00077925646,0.0008806351,0.0001357707,0.00028620096,0.00005111109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072280655,0.00011100483,0.00072310667,0.00008244848,0.000030627063,0.00000694299,0.00013081945,0.00037794758,0.0002740831],"category_scores_gemma":[0.00077756576,0.000080610786,0.00015475483,0.000061508894,0.00023808518,0.00007176639,0.000059418588,0.0003361418,0.000029938343],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072712306,0.0002827535,0.06975877,0.0000065729205,0.00045590207,0.0000015293398,0.00010458155,0.0000012404003,0.9244679,0.000068179266,0.0017614289,0.0023640154],"study_design_scores_gemma":[0.04421475,0.016830321,0.46553725,0.0005106328,0.003445618,0.004453532,0.00087853917,0.000013723637,0.1859596,0.0063219815,0.27085656,0.0009775064],"about_ca_topic_score_codex":0.000085203596,"about_ca_topic_score_gemma":0.000023300785,"teacher_disagreement_score":0.7385083,"about_ca_system_score_codex":0.0000063884886,"about_ca_system_score_gemma":0.00011336504,"threshold_uncertainty_score":0.32872126},"labels":[],"label_agreement":null},{"id":"W2133211243","doi":"10.1128/jcm.01551-08","title":"Use of <i>Bordetella pertussis</i> BP3385 To Establish a Cutoff Value for an IS <i>481</i> -Targeted Real-Time PCR Assay","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto; Toronto Public Health","funders":"","keywords":"Bordetella pertussis; Cutoff; Whooping cough; Polymerase chain reaction; Virology; Biology; Microbiology; Real-time polymerase chain reaction; Bordetella; Bacteria; Genetics; Gene; Physics","score_opus":0.07719679309276041,"score_gpt":0.3459130672168508,"score_spread":0.2687162741240904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133211243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938605,0.00030436434,0.0003421153,0.0010630249,0.0034454113,0.0003732566,0.000440066,0.00003237669,0.00013888454],"genre_scores_gemma":[0.97714627,0.0024172189,0.010618037,0.0039177667,0.0013115404,0.000018466888,0.00026963578,0.00009938718,0.004201665],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953774,0.0011275547,0.0025306835,0.00042374118,0.000020828902,0.00051976705],"domain_scores_gemma":[0.99450326,0.0025216884,0.0013546391,0.00046084504,0.0010109516,0.00014859923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017600426,0.0003103845,0.0016016264,0.0002711438,0.00019670808,0.000020293672,0.0004568751,0.0009267943,0.0005464175],"category_scores_gemma":[0.0020853004,0.00023748582,0.00077247235,0.00025520968,0.00036047905,0.00029097588,0.00011735845,0.00058748655,0.00010907909],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002093343,0.0007469325,0.004632311,0.000011962887,0.0004140945,0.0000034166064,0.00016130036,0.000012817689,0.85543644,0.0000476893,0.13396709,0.0024726284],"study_design_scores_gemma":[0.003834978,0.0072290543,0.0074060503,0.00007552558,0.00025216272,0.0018185821,0.000037085763,0.0000072767953,0.1610892,0.00009512732,0.8177675,0.0003874564],"about_ca_topic_score_codex":0.00017411141,"about_ca_topic_score_gemma":0.000027950471,"teacher_disagreement_score":0.6943472,"about_ca_system_score_codex":0.000030178284,"about_ca_system_score_gemma":0.0003483287,"threshold_uncertainty_score":0.96843904},"labels":[],"label_agreement":null},{"id":"W2133681902","doi":"10.1139/w07-071","title":"Osmolarity affects Bvg-mediated virulence regulation by Bordetella pertussis","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bordetella pertussis; Pertussis toxin; Microbiology; Osmotic concentration; Phenotype; Virulence; Biology; Cell biology; Gene; Bacteria; Biochemistry; G protein; Genetics; Signal transduction","score_opus":0.007151264467111379,"score_gpt":0.21217600569817469,"score_spread":0.20502474123106332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133681902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918614,0.0038785702,0.00037413862,0.0005499432,0.0027540782,0.000099494144,0.00013321666,0.000013176493,0.00033596982],"genre_scores_gemma":[0.9986624,0.00006149692,0.000067418245,0.00027476723,0.000119239616,7.092152e-7,0.00016311413,0.000014397497,0.0006364222],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986887,0.00019078668,0.00042742136,0.00017166899,0.0000075444495,0.0005138816],"domain_scores_gemma":[0.99895287,0.00020708375,0.0003086826,0.00015820442,0.00022006987,0.00015310454],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007018856,0.00016958315,0.0003265987,0.0003542282,0.00024883926,0.00002027411,0.00022497297,0.00048653973,0.0015387016],"category_scores_gemma":[0.00024449397,0.00014755953,0.000116657684,0.00020340536,0.00022249419,0.00010895295,0.000014644199,0.00041048042,0.0001661632],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006782106,0.0000221203,0.00800928,0.000004652197,0.000087543434,0.000010527259,0.00009868501,8.391604e-7,0.9485677,0.00007939115,0.04023155,0.002819922],"study_design_scores_gemma":[0.0010570195,0.00040469161,0.028813234,0.00003589766,0.00004740823,0.0021485153,0.00007563231,4.075651e-7,0.25890228,0.000054515673,0.70823514,0.00022522452],"about_ca_topic_score_codex":0.0033023201,"about_ca_topic_score_gemma":0.018064521,"teacher_disagreement_score":0.6896654,"about_ca_system_score_codex":0.00014763595,"about_ca_system_score_gemma":0.00040300612,"threshold_uncertainty_score":0.99985325},"labels":[],"label_agreement":null},{"id":"W2133701259","doi":"10.1128/jcm.41.7.3344-3347.2003","title":"Strain Variation among <i>Bordetella pertussis</i> Isolates from Quebec and Alberta Provinces of Canada from 1985 to 1994","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; Institut National de Santé Publique du Québec; Ste. Anne's Hospital; Montreal Children's Hospital; University of Alberta","funders":"","keywords":"Bordetella pertussis; Typing; Pulsed-field gel electrophoresis; Strain (injury); Microbiology; Virology; Biology; Whooping cough; Gene; Genetics; Bacteria; Vaccination; Genotype","score_opus":0.011363389011430858,"score_gpt":0.2593262021309621,"score_spread":0.24796281311953122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133701259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99522513,0.0007839919,0.00008259015,0.0006805256,0.0027169,0.00011841036,0.00026867303,0.0000038987678,0.00011987324],"genre_scores_gemma":[0.9984017,0.000117799216,0.00039841264,0.000324614,0.00017820514,0.0000014438972,0.000051682007,0.0000105525605,0.00051561795],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974561,0.0006646366,0.0013916455,0.00024547096,0.0000103151015,0.0002318542],"domain_scores_gemma":[0.99671304,0.0020399806,0.00086846563,0.00016490219,0.00014303304,0.00007059646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005528443,0.00017081031,0.00078935514,0.000067741974,0.000079982616,0.0000144002,0.0001748838,0.00041013662,0.0007693585],"category_scores_gemma":[0.0011156689,0.0001262101,0.00013962251,0.000078893136,0.00015627412,0.00008651376,0.00004662298,0.00038327108,0.000006086977],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038033663,0.00016142684,0.07179715,0.000004913038,0.00048489604,0.0000015018668,0.0001985517,0.000006046844,0.9193539,0.00013707549,0.0046468987,0.0028273286],"study_design_scores_gemma":[0.0043531945,0.0016211232,0.5201672,0.00015688942,0.00033311767,0.00014515108,0.0003763437,0.0000031381105,0.061265692,0.00073652854,0.4103743,0.00046732635],"about_ca_topic_score_codex":0.6290842,"about_ca_topic_score_gemma":0.8491038,"teacher_disagreement_score":0.8580882,"about_ca_system_score_codex":0.000035402594,"about_ca_system_score_gemma":0.0006311056,"threshold_uncertainty_score":0.8423936},"labels":[],"label_agreement":null},{"id":"W2133701921","doi":"10.1139/o11-076","title":"Patterns of sequence variation within the <i>Neisseria meningitidis</i> lactoferrin binding proteins<sup>1</sup>This article is part of a Special Issue entitled Lactoferrin and has undergone the Journal’s usual peer review process.","year":2012,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lactoferrin; Biology; Peptide sequence; Neisseria; Neisseria meningitidis; Genetics; Neisseriaceae; Locus (genetics); Gene; Bacteria","score_opus":0.026597935813169715,"score_gpt":0.26424404891110564,"score_spread":0.23764611309793593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133701921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932142,0.004877538,0.000018249124,0.0010747199,0.00022896125,0.00021105156,0.00007262173,0.000007818529,0.00029485804],"genre_scores_gemma":[0.9963723,0.0015079096,0.000011028477,0.00008718935,0.000347252,0.00001572495,0.00004871807,0.000007278941,0.0016026093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999051,0.00020535744,0.00036623562,0.00014541346,0.000025638872,0.00020636847],"domain_scores_gemma":[0.9992472,0.00008378891,0.00033198908,0.00016701034,0.00014109387,0.000028936825],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00076635246,0.00014245455,0.00024606625,0.000020153762,0.00023203426,0.000016342261,0.00012358073,0.00019469384,0.0021371532],"category_scores_gemma":[0.00012461016,0.00008451833,0.000044083503,0.00008971377,0.00017967202,0.0000765096,0.00006440344,0.0002321666,0.000011461465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079996564,0.00008466901,0.006893618,0.00028745024,0.00007743504,1.09213694e-7,0.0015104702,4.0486452e-7,0.98898584,0.000054958433,0.0017210575,0.00030400653],"study_design_scores_gemma":[0.00048314998,0.00012133713,0.0007940302,0.00018394167,0.00012921961,0.00012224443,0.0007063429,0.000003967147,0.9706096,0.00004578678,0.026683245,0.000117140306],"about_ca_topic_score_codex":0.00009595949,"about_ca_topic_score_gemma":0.0000058337882,"teacher_disagreement_score":0.024962187,"about_ca_system_score_codex":0.0000118453345,"about_ca_system_score_gemma":0.00005740763,"threshold_uncertainty_score":0.998775},"labels":[],"label_agreement":null},{"id":"W2133877774","doi":"10.1093/pubmed/fdp075","title":"Invasive meningococcal disease--improving management through structured review of cases in the Hunter New England area, Australia","year":2009,"lang":"en","type":"article","venue":"Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"","keywords":"Medicine; Audit; Public health; Disease; Epidemiology; Meningococcal disease; Cause of death; Infectious disease (medical specialty); Pediatrics; Emergency medicine; Intensive care medicine; Medical emergency; Internal medicine; Neisseria meningitidis; Pathology","score_opus":0.09118625096427112,"score_gpt":0.3456679214562511,"score_spread":0.25448167049197995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133877774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9457447,0.019248808,0.00024273696,0.033298507,0.000797149,0.00046910747,0.000019654757,0.0000073839583,0.00017196889],"genre_scores_gemma":[0.99181163,0.0056062248,0.00016725963,0.0020819309,0.00015585276,0.0000020798575,0.000016104004,0.0000037975215,0.0001551413],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9985398,0.00042677418,0.00065481616,0.00009457218,0.000037451384,0.00024658418],"domain_scores_gemma":[0.99903923,0.000100694015,0.0005489576,0.00015932217,0.00009463706,0.00005714883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010375518,0.00010568783,0.000343197,0.000108877866,0.0000723798,0.000023272496,0.00019565076,0.00005235853,0.00039590182],"category_scores_gemma":[0.00024209486,0.00006305377,0.00010065282,0.00019125557,0.000024233857,0.00021394415,0.000020291127,0.000263226,0.0000027777517],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009838806,0.0023660485,0.041541297,0.009303006,0.0012291007,0.00038832714,0.01233292,0.000013398258,0.027440716,0.02149413,0.35928413,0.52362305],"study_design_scores_gemma":[0.005557541,0.0022348333,0.5267373,0.0045611775,0.00014594219,0.0020563458,0.0010008032,3.890024e-7,0.000426667,0.0017114882,0.45530576,0.00026176753],"about_ca_topic_score_codex":0.00030234695,"about_ca_topic_score_gemma":0.00014281037,"teacher_disagreement_score":0.52336127,"about_ca_system_score_codex":0.000062758714,"about_ca_system_score_gemma":0.0003050887,"threshold_uncertainty_score":0.43348473},"labels":[],"label_agreement":null},{"id":"W2134065120","doi":"10.1086/368360","title":"Highly Conserved<i>Neisseria meningitidis</i>Inner‐Core Lipopolysaccharide Epitope Confers Protection against Experimental Meningococcal Bacteremia","year":2003,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases; Medical Research Council; Ministry of Education, India","keywords":"Neisseria meningitidis; Epitope; Monoclonal antibody; Lipopolysaccharide; Microbiology; Bacteremia; Western blot; Neisseriaceae; Meningococcal disease; Biology; Virology; Antibody; Immunology; Bacteria; Antibiotics; Biochemistry; Gene; Genetics","score_opus":0.01763319351564738,"score_gpt":0.24707584282265338,"score_spread":0.229442649307006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134065120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337864,0.0025534357,0.00015186465,0.0001164145,0.002858749,0.0003458836,0.000023263357,0.00009443169,0.0004772957],"genre_scores_gemma":[0.9991401,0.00028008627,0.0000150854175,0.00011787017,0.00022692041,0.000029124412,0.000013074854,0.000034600867,0.00014313667],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818873,0.00057316397,0.00064843125,0.00017933274,0.000043472053,0.00036684886],"domain_scores_gemma":[0.9985929,0.00017381144,0.00060547615,0.00026789948,0.00026851802,0.00009137656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041694482,0.0003029422,0.00043628356,0.00018527126,0.0005840835,0.00007642603,0.00021572493,0.00017316567,0.0007227066],"category_scores_gemma":[0.00026365044,0.00020729325,0.0002693379,0.0001746277,0.00020657701,0.00032285115,0.000047014884,0.00044788443,0.0000789578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049069844,0.00039343312,0.009405141,0.000016414393,0.0004010231,0.0000041222506,0.0002668249,0.000045652847,0.98591566,0.0007735653,0.0015029298,0.00078450463],"study_design_scores_gemma":[0.004179857,0.0014776217,0.004975403,0.00015376114,0.0004252372,0.0021070307,0.0010807486,0.0000035009382,0.96015453,0.00035655271,0.024638345,0.00044742704],"about_ca_topic_score_codex":0.00015645256,"about_ca_topic_score_gemma":0.000028876837,"teacher_disagreement_score":0.025761176,"about_ca_system_score_codex":0.00013644458,"about_ca_system_score_gemma":0.0001991723,"threshold_uncertainty_score":0.84531736},"labels":[],"label_agreement":null},{"id":"W2134265137","doi":"10.1086/421096","title":"Prevention of Pertussis among Adolescents by Vaccination: Taking Action on What We Know and Acknowledging What We Do Not Know","year":2004,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Pertussis vaccine; Diphtheria; Whooping cough; Vaccination; Outbreak; Immunity; Pediatrics; Herd immunity; Bordetella pertussis; Immunology; Immunization; Virology; Immune system","score_opus":0.0370160500832326,"score_gpt":0.33871661525226654,"score_spread":0.30170056516903393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134265137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79803354,0.11023232,0.0001849241,0.055209447,0.033148326,0.0021230928,0.000280033,0.000638343,0.00014999307],"genre_scores_gemma":[0.7896051,0.1945399,0.0000023867385,0.009936698,0.0027951389,0.00014007583,0.0010058357,0.00011041867,0.0018644253],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965662,0.0008281018,0.0011259281,0.00093737396,0.00007522032,0.00046722026],"domain_scores_gemma":[0.9971879,0.00065988576,0.0012422851,0.0005237296,0.0003063936,0.00007979275],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002831658,0.0005824618,0.0010311982,0.00036311397,0.00041772964,0.0004466337,0.0002118519,0.0018207058,0.0011303453],"category_scores_gemma":[0.0005038378,0.0005316013,0.00063089695,0.00025090054,0.000256576,0.0013631063,0.00016147815,0.0016328603,0.00017838183],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027739484,0.0022916277,0.053177748,0.0014233323,0.0009885471,0.00000871112,0.000107988344,0.000009314962,0.0010941861,0.00002312367,0.22853951,0.7120585],"study_design_scores_gemma":[0.007249252,0.0025043862,0.18476538,0.026167698,0.0021404373,0.000048434333,0.00037971503,0.000010238857,0.002068906,0.0010136066,0.7720251,0.0016268512],"about_ca_topic_score_codex":0.000038632614,"about_ca_topic_score_gemma":0.000057571393,"teacher_disagreement_score":0.71043164,"about_ca_system_score_codex":0.00019223263,"about_ca_system_score_gemma":0.0001402313,"threshold_uncertainty_score":0.99978274},"labels":[],"label_agreement":null},{"id":"W2134945394","doi":"10.1128/cvi.00529-09","title":"Updated Postlicensure Surveillance of the Meningococcal C Conjugate Vaccine in England and Wales: Effectiveness, Validation of Serological Correlates of Protection, and Modeling Predictions of the Duration of Herd Immunity","year":2010,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":212,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Herd immunity; Medicine; Carriage; Vaccination; Meningococcal vaccine; Incidence (geometry); Population; Serology; Conjugate vaccine; Herd; Confidence interval; Meningococcal disease; Vaccine efficacy; Immunology; Immunization; Neisseria meningitidis; Antibody; Environmental health; Internal medicine; Veterinary medicine; Biology","score_opus":0.01997173495552353,"score_gpt":0.2753974583767715,"score_spread":0.255425723421248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134945394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99813753,0.00056522916,0.00006217177,0.00019801402,0.0005077262,0.0004727402,0.000044572986,0.000008211446,0.0000037951968],"genre_scores_gemma":[0.99947435,0.0004522184,0.000012663007,0.0000025208858,0.000013733235,0.000012324162,0.000020791807,0.0000058529868,0.0000055323235],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99776816,0.0009056802,0.0010122547,0.00018611888,0.000017958064,0.00010981623],"domain_scores_gemma":[0.9982058,0.0005923544,0.00060877175,0.00026246035,0.00032088644,0.000009773986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010489223,0.00012678819,0.0005910012,0.00006982394,0.00009585411,0.000002331846,0.00011746533,0.00039776595,0.000021461243],"category_scores_gemma":[0.00077207,0.000075419724,0.000074990865,0.00021276835,0.00034305014,0.00006323788,0.00017826064,0.000515619,1.2746291e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009346363,0.00014972845,0.5120604,0.00004792021,0.00010315597,1.7663021e-8,0.00009840779,0.00004746999,0.48599985,0.00012589454,8.059652e-7,0.0004316982],"study_design_scores_gemma":[0.0033528758,0.0006800933,0.9098139,0.00007318286,0.000060214526,0.000038863374,0.000046215326,0.00043696334,0.08509017,0.00031492423,0.000035726123,0.000056903427],"about_ca_topic_score_codex":0.0008324654,"about_ca_topic_score_gemma":0.00040317528,"teacher_disagreement_score":0.4009097,"about_ca_system_score_codex":0.0000031315765,"about_ca_system_score_gemma":0.00003427444,"threshold_uncertainty_score":0.30755273},"labels":[],"label_agreement":null},{"id":"W2136135930","doi":"10.1586/14760584.8.1.1","title":"Mucosal vaccination of the newborn: an unrealized opportunity","year":2008,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Vaccination; Medicine; Immunology; Virology","score_opus":0.05844422045145258,"score_gpt":0.37302092020424293,"score_spread":0.31457669975279035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136135930","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005270625,0.9958555,0.0000073897286,0.00013105359,0.00202466,0.0012356021,0.00010715964,0.00004438796,0.00054155104],"genre_scores_gemma":[0.000010393472,0.9983156,0.000076648,0.00010516767,0.00022003835,0.00013695056,0.0005971368,0.00004639086,0.0004916852],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965407,0.0011442961,0.0016478283,0.00037686675,0.000044339202,0.00024591692],"domain_scores_gemma":[0.9965979,0.00018941583,0.0016573106,0.0011409535,0.00037213802,0.00004227132],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033892418,0.0005109757,0.002986157,0.00016373412,0.00016655108,0.000006114794,0.0007384208,0.00047729554,0.0027760966],"category_scores_gemma":[0.00041232165,0.00028654435,0.0011115628,0.0005672245,0.000048517217,0.00015098926,0.00019115995,0.00033859577,0.000033085696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009844754,0.00023250571,0.000008338918,0.027905993,0.00024757851,3.6007964e-7,0.00003371698,1.3122837e-8,0.00025011713,0.00016777852,0.036850624,0.93429315],"study_design_scores_gemma":[0.0003342991,0.00010835849,0.00011930994,0.034011386,0.00040357286,0.00028515467,0.000007375603,5.8294848e-8,0.00022282699,0.000011113067,0.9642479,0.00024863982],"about_ca_topic_score_codex":0.00028259293,"about_ca_topic_score_gemma":0.000032333148,"teacher_disagreement_score":0.9340445,"about_ca_system_score_codex":0.00004213412,"about_ca_system_score_gemma":0.00045044112,"threshold_uncertainty_score":0.9999587},"labels":[],"label_agreement":null},{"id":"W2136655151","doi":"10.1503/cmaj.1031861","title":"Invasive Haemophilus influenzae type b infections in vaccinated and unvaccinated children in Canada, 2001-2003","year":2005,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"British Columbia Children's Hospital","funders":"Health Canada; IWK Health Centre","keywords":"Medicine; Vaccination; Pediatrics; Meningitis; Case fatality rate; Hib vaccine; Haemophilus influenzae; Hepatitis B; Conjugate vaccine; Immunization; Epidemiology; Immunology; Internal medicine; Antibiotics","score_opus":0.005845977882225072,"score_gpt":0.21337641135243426,"score_spread":0.2075304334702092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136655151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98952854,0.00064382836,5.574166e-7,0.00825163,0.0009943579,0.00013206624,0.000028956605,0.000009700546,0.0004103489],"genre_scores_gemma":[0.9966409,0.00043601214,0.00000566321,0.0023873798,0.00019220827,0.0000051887873,0.00004295783,0.000010450189,0.00027919363],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99856544,0.00025420703,0.00045177626,0.00015227203,0.000062670006,0.0005136423],"domain_scores_gemma":[0.9990818,0.000114060706,0.00014123613,0.00006952067,0.00032117197,0.00027221075],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005680153,0.00012978014,0.00024349723,0.0004039999,0.00019904785,0.00003282246,0.00011095836,0.00041531096,0.0045353025],"category_scores_gemma":[0.0019008621,0.00012827464,0.000020402866,0.00076469686,0.000012382453,0.00016533767,0.000018997698,0.0010288059,0.000084102474],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011178768,0.000037374426,0.93448746,0.0000014465207,0.00007308782,0.00002377113,0.000082530154,0.00003331658,0.00027528804,0.0000390887,0.057254173,0.007681277],"study_design_scores_gemma":[0.0019488869,0.00004389083,0.9155294,0.000037755846,0.000010638693,0.00068543566,0.000082763305,0.000018683773,0.00010976968,0.000024572255,0.081362575,0.00014568577],"about_ca_topic_score_codex":0.9355891,"about_ca_topic_score_gemma":0.9993541,"teacher_disagreement_score":0.06376506,"about_ca_system_score_codex":0.0025787565,"about_ca_system_score_gemma":0.008815305,"threshold_uncertainty_score":0.9968038},"labels":[],"label_agreement":null},{"id":"W2136732064","doi":"10.1128/iai.73.6.3636-3645.2005","title":"Infection of Newborn Piglets with <i>Bordetella pertussis</i> : a New Model for Pertussis","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Shared Health; University of Alberta; University of Saskatchewan","funders":"IWK Health Centre; Dalhousie University","keywords":"Bordetella pertussis; Whooping cough; Immunology; Bronchoalveolar lavage; Pertussis toxin; Immunity; Biology; Microbiology; Lymphocytosis; Immune system; Pertussis vaccine; Virology; Medicine; Lung; Vaccination; Bacteria; Immunization; Internal medicine; Receptor; G protein","score_opus":0.020833670671442286,"score_gpt":0.2542083840216479,"score_spread":0.23337471335020563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136732064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9726588,0.0003237943,0.024922287,0.0003478573,0.00032567172,0.0003074844,0.000022829452,0.00010434911,0.0009869403],"genre_scores_gemma":[0.9963807,0.0005863265,0.0006168167,0.00010884212,0.00009034561,0.000034175817,0.00005424314,0.000019189843,0.002109359],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992323,0.000084206906,0.00026952612,0.00018934658,0.000015552585,0.00020908393],"domain_scores_gemma":[0.9993577,0.00008278539,0.00014397917,0.00022018988,0.00015897652,0.000036377452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015968928,0.00018472633,0.0002680976,0.00015476395,0.000364798,0.000026299074,0.000046328187,0.00021502681,0.00021776682],"category_scores_gemma":[0.000062047715,0.00014578976,0.00009881657,0.00017132981,0.000089035435,0.00025833366,0.000037451424,0.00020787667,0.000016984572],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011493788,0.0007955974,0.041559864,0.0001019644,0.0004240091,7.1651456e-8,0.0014002102,0.0010736856,0.62046885,0.00079532556,0.0066125956,0.32561845],"study_design_scores_gemma":[0.0076482208,0.0020786354,0.16359514,0.00013325944,0.00036732864,0.0002432549,0.000068898386,0.0049026352,0.115719184,0.00036395024,0.7041592,0.0007202942],"about_ca_topic_score_codex":0.0053431843,"about_ca_topic_score_gemma":0.0024083054,"teacher_disagreement_score":0.6975466,"about_ca_system_score_codex":0.00003494579,"about_ca_system_score_gemma":0.00008899881,"threshold_uncertainty_score":0.8077332},"labels":[],"label_agreement":null},{"id":"W2136781634","doi":"10.1016/j.carres.2009.01.005","title":"A dual role for the lex2 locus: identification of galactosyltransferase activity in non-typeable Haemophilus influenzae strains 1124 and 2019","year":2009,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Haemophilus influenzae; Chemistry; Haemophilus; Microbiology; Locus (genetics); Identification (biology); Genetics; Bacteria; Gene; Antibiotics; Biology; Biochemistry","score_opus":0.034294421526688705,"score_gpt":0.3301211759672812,"score_spread":0.2958267544405925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136781634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973253,0.00090483984,0.00008659248,0.0007141663,0.00014131686,0.0006443295,0.00007120008,0.000012557737,0.00009971708],"genre_scores_gemma":[0.9993056,0.00026850044,0.0000029039904,0.0000104426,0.0000451057,0.000047651032,0.000024491983,0.000008723046,0.00028658178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989863,0.00019460518,0.00023097153,0.0002235974,0.00003281647,0.0003316793],"domain_scores_gemma":[0.99921215,0.0002615507,0.000044041408,0.00027046917,0.00019081854,0.000020984304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001055613,0.00009952811,0.00018823607,0.00022125401,0.00021595637,0.000041572188,0.00012545708,0.00016685307,0.00002983668],"category_scores_gemma":[0.00011295471,0.00007514434,0.00004653136,0.00035689012,0.00016100916,0.00014864413,0.000031093114,0.0003254901,0.000014749484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022452907,0.00013387279,0.0005143182,0.000020148695,0.000034492925,4.7447455e-7,0.00028959636,0.000027498463,0.9905998,0.00041899222,0.00020784365,0.0075284434],"study_design_scores_gemma":[0.0015662911,0.00044525403,0.1336431,0.000033876688,0.000023738865,0.000008893945,0.00025828436,0.0002659028,0.86135817,0.0011610631,0.0011007331,0.00013466094],"about_ca_topic_score_codex":0.0012308756,"about_ca_topic_score_gemma":0.0003079741,"teacher_disagreement_score":0.13312879,"about_ca_system_score_codex":0.000033329114,"about_ca_system_score_gemma":0.00008401419,"threshold_uncertainty_score":0.3064297},"labels":[],"label_agreement":null},{"id":"W2136967275","doi":"","title":"Bacterial meningitis in adults","year":2004,"lang":"en","type":"article","venue":"UvA-DARE (University of Amsterdam)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Bacterial meningitis; Meningitis; Medicine; Pediatrics","score_opus":0.007199606651765895,"score_gpt":0.18604092286258847,"score_spread":0.17884131621082258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136967275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965827,0.00006398033,0.0000828153,0.0003169856,0.00075127266,0.0001108266,0.000056692727,0.000042387484,0.0019923688],"genre_scores_gemma":[0.99892294,0.00003419268,0.00015446554,0.000008998077,0.000029376417,2.3913464e-7,0.00009260315,0.000006333627,0.00075084536],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994538,0.000045931665,0.00011283762,0.00018671098,0.000012145852,0.00018857484],"domain_scores_gemma":[0.9996753,0.00001866979,0.00007989045,0.00015800488,0.000050889772,0.000017291622],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000057507878,0.000100042686,0.00021127846,0.00015337975,0.00011648249,0.0000060428665,0.00015481362,0.00016430688,0.0021138247],"category_scores_gemma":[0.000009766501,0.00011875556,0.00007603281,0.00015040356,0.00009336569,0.00019170732,0.000095629934,0.0001189105,0.00022203884],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021233477,0.0005851536,0.013243907,0.00010136356,0.00021259858,0.000050246286,0.008141583,0.000034159875,0.94913954,0.0027272652,0.0022412033,0.021399628],"study_design_scores_gemma":[0.037565943,0.0019387807,0.6917082,0.0011008743,0.00013880165,0.0002754217,0.009979063,0.000003870135,0.072429515,0.0010042813,0.18267934,0.0011758695],"about_ca_topic_score_codex":0.0034871777,"about_ca_topic_score_gemma":0.0023607335,"teacher_disagreement_score":0.87671,"about_ca_system_score_codex":0.000054239037,"about_ca_system_score_gemma":0.000043070635,"threshold_uncertainty_score":0.9987984},"labels":[],"label_agreement":null},{"id":"W2137080288","doi":"10.1093/jmicro/52.5.465","title":"Effect of surface lipopolysaccharide on the nature of membrane vesicles liberated from the Gram-negative bacterium Pseudomonas aeruginosa","year":2003,"lang":"en","type":"article","venue":"Journal of Electron Microscopy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipopolysaccharide; Pseudomonas aeruginosa; Bacterial outer membrane; Microbiology; Mutant; Gentamicin; Bacteria; Gram-negative bacteria; Vesicle; Chemistry; Gram; Biology; Antibiotics; Membrane; Escherichia coli; Biochemistry; Gene; Immunology; Genetics","score_opus":0.005501261727694175,"score_gpt":0.25988763249439595,"score_spread":0.2543863707667018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137080288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953913,0.0025283683,0.00000896959,0.0006553965,0.0010687332,0.00022545303,0.000048274123,0.00000788534,0.0000656067],"genre_scores_gemma":[0.9992499,0.00035299026,0.000057370406,0.00010609167,0.0000873761,0.0000021365365,0.000008426692,0.000018391698,0.000117312324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782836,0.0011530108,0.0005520805,0.00014780644,0.000044742927,0.00027400788],"domain_scores_gemma":[0.9968917,0.0017870592,0.0007869228,0.00027399842,0.00024091307,0.000019420953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083533465,0.00023027664,0.0005360296,0.000059902348,0.00016834933,0.000025802832,0.00032007016,0.00028772405,0.00032190603],"category_scores_gemma":[0.0003701056,0.000114531715,0.00023865043,0.00021541184,0.00017570272,0.00009829625,0.000022302394,0.0010127445,0.000013801144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016415373,0.000103172315,0.0009525992,0.000011156437,0.00046699756,7.9928196e-7,0.00020490226,0.000012120516,0.99443614,0.00043471597,0.0016248141,0.0001110473],"study_design_scores_gemma":[0.0013354523,0.0020489017,0.0013583514,0.00010351098,0.00015697377,0.000070570284,0.000060210707,3.2799713e-7,0.9917621,0.00014992579,0.0028540932,0.000099606405],"about_ca_topic_score_codex":0.00016719553,"about_ca_topic_score_gemma":0.000023687358,"teacher_disagreement_score":0.003858591,"about_ca_system_score_codex":0.000036773792,"about_ca_system_score_gemma":0.00011728121,"threshold_uncertainty_score":0.46704677},"labels":[],"label_agreement":null},{"id":"W2137108187","doi":"10.1186/1471-2458-12-1062","title":"Second hand smoke exposure and the risk of invasive meningococcal disease in children: systematic review and meta-analysis","year":2012,"lang":"en","type":"review","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Nottingham; British Heart Foundation; Cancer Research UK","keywords":"Medicine; Meningococcal disease; Biostatistics; Meta-analysis; Epidemiology; Public health; Environmental health; Disease; Neisseria meningitidis; Internal medicine; Pathology","score_opus":0.0830830701919855,"score_gpt":0.3272127113900719,"score_spread":0.2441296411980864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137108187","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00091988815,0.9943413,0.000009351613,0.00021689829,0.00006049788,0.0036739889,0.0007590491,0.000010509671,0.000008507428],"genre_scores_gemma":[0.006076068,0.992467,0.000007407423,0.0001356891,0.00001942497,0.00074375246,0.00034624012,0.00001799212,0.0001864193],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9917189,0.0060012704,0.0015160287,0.00037438053,0.00002677449,0.00036265145],"domain_scores_gemma":[0.9966165,0.00096075615,0.0015908559,0.00064120634,0.000072992814,0.00011770421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043702032,0.0003860858,0.0070858505,0.00036181463,0.0002217317,0.000055814417,0.00020307896,0.00024135884,0.00063663546],"category_scores_gemma":[0.00067657296,0.00018862495,0.0010756593,0.0006023974,0.0002355121,0.000113254,0.00014299648,0.00042514398,0.000008558971],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009396698,0.0001206387,0.0048385905,0.8805155,0.11199114,1.07828e-7,0.00019064944,3.7389462e-8,9.178026e-8,0.0005906562,0.000104859864,0.0016383368],"study_design_scores_gemma":[0.0010122345,0.000072954346,0.0065947887,0.008384702,0.93070894,0.00009437611,0.000024621937,1.2712518e-7,1.1707636e-7,0.000015342574,0.052736294,0.00035548743],"about_ca_topic_score_codex":0.00068285444,"about_ca_topic_score_gemma":0.0008911526,"teacher_disagreement_score":0.8721308,"about_ca_system_score_codex":0.00003953034,"about_ca_system_score_gemma":0.0005357283,"threshold_uncertainty_score":0.7691902},"labels":[],"label_agreement":null},{"id":"W2137476958","doi":"10.1136/fn.88.3.f179","title":"Long term outcome of neonatal meningitis","year":2003,"lang":"en","type":"article","venue":"Archives of Disease in Childhood Fetal & Neonatal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stollery Children's Hospital; University of Alberta","funders":"University of Alberta","keywords":"Medicine; Pediatrics; Meningitis; Intelligence quotient; Hydrocephalus; Surgery; Cognition; Psychiatry","score_opus":0.008391620039826546,"score_gpt":0.2418099480354439,"score_spread":0.23341832799561735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137476958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953833,0.0027932003,0.00013938009,0.000034949804,0.00040539115,0.00023132596,0.00031602808,0.000028502653,0.0006679049],"genre_scores_gemma":[0.99932,0.00006609936,0.00016758361,0.000010165488,0.000023231989,0.000014599622,0.00021609689,0.000020033465,0.0001622311],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986934,0.0001379318,0.00054001017,0.000292584,0.00003173466,0.00030436227],"domain_scores_gemma":[0.99926394,0.00017732408,0.00017239588,0.00030695036,0.00001896045,0.000060419527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072201976,0.00021096968,0.0003822212,0.00023481724,0.00007207255,0.000007204037,0.00021576173,0.00007735068,0.00045348794],"category_scores_gemma":[0.00012425637,0.00019640937,0.00025328793,0.00014052707,0.00026354197,0.00018334013,0.000109170986,0.00021407854,0.000025382767],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005025724,0.0007023895,0.9191028,0.000113149064,0.00024471618,0.000020701773,0.0009131752,0.000019560355,0.031184925,0.00502407,0.000011795231,0.04216015],"study_design_scores_gemma":[0.002576831,0.00016369438,0.9703402,0.000115557035,0.00005867501,0.00005233642,0.00008896649,0.0000014590686,0.024762385,0.0011610469,0.00045920443,0.00021968063],"about_ca_topic_score_codex":0.00010443292,"about_ca_topic_score_gemma":0.000050195198,"teacher_disagreement_score":0.051237367,"about_ca_system_score_codex":0.00000647172,"about_ca_system_score_gemma":0.00006831295,"threshold_uncertainty_score":0.8009342},"labels":[],"label_agreement":null},{"id":"W2137502351","doi":"10.1128/cvi.00143-07","title":"Improved Efficacy of a Licensed Acellular Pertussis Vaccine, Reformulated in an Adjuvant Emulsion of Liposomes in Oil, in a Murine Model","year":2007,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Immunovaccine (Canada)","funders":"","keywords":"Adjuvant; Bordetella pertussis; Emulsion; Tetanus; Medicine; Diphtheria; Vaccination; Pertussis vaccine; Virology; Liposome; Immunization; Diphtheria toxin; Whooping cough; Microbiology; Immunology; Antibody; Chemistry; Biology; Toxin","score_opus":0.02403517373270697,"score_gpt":0.31946266593955264,"score_spread":0.29542749220684567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137502351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964081,0.0026236495,0.000022754792,0.00028294066,0.00036173168,0.00023654802,0.000010062565,0.000027023709,0.000027181295],"genre_scores_gemma":[0.9975737,0.001990909,0.00012468314,0.000035870504,0.000028837283,0.000010660486,0.00006524863,0.000020715595,0.00014941096],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966903,0.00031724214,0.0020200734,0.00048123265,0.000016528964,0.0004746618],"domain_scores_gemma":[0.99850017,0.00053141266,0.0003708778,0.00044325241,0.000116816795,0.00003749592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009775113,0.00026401615,0.0011880189,0.0006446054,0.000036640962,0.0000039692613,0.00022725643,0.00071886217,0.0000983812],"category_scores_gemma":[0.0004180188,0.0002085002,0.00013110449,0.000512963,0.00009115151,0.00014778663,0.00020007716,0.0006713675,0.0000048108054],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0063812854,0.002091158,0.1561077,0.000040094525,0.00007335319,0.0000058381584,0.00032720415,0.000031818,0.7935675,0.000083629195,0.000006692913,0.041283786],"study_design_scores_gemma":[0.01965518,0.0018543105,0.93028104,0.00015652974,0.000035860747,0.000029966643,0.00016076237,0.0017890973,0.04550255,0.00010947096,0.00017752014,0.0002477034],"about_ca_topic_score_codex":0.0013879102,"about_ca_topic_score_gemma":0.003760513,"teacher_disagreement_score":0.7741734,"about_ca_system_score_codex":0.000028344752,"about_ca_system_score_gemma":0.000048571863,"threshold_uncertainty_score":0.85023916},"labels":[],"label_agreement":null},{"id":"W2138299328","doi":"10.1046/j.1365-2958.2000.01707.x","title":"The position of phosphorylcholine on the lipopolysaccharide of <i>Haemophilus influenzae</i> affects binding and sensitivity to C‐reactive protein‐mediated killing","year":2000,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":153,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Haemophilus influenzae; Phase variation; Biology; Microbiology; Phosphorylcholine; Lipid A; Epitope; Lipopolysaccharide; Biochemistry; Antibody; Immunology; Gene; Antibiotics; Phenotype","score_opus":0.006069538486993579,"score_gpt":0.2147409699877665,"score_spread":0.20867143150077294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138299328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764496,0.00039665532,0.000050316794,0.00091143884,0.0001836346,0.000588361,0.000106089596,0.000021881897,0.000096690615],"genre_scores_gemma":[0.99943703,0.00004410957,0.000021071955,0.0003118829,0.000015862128,0.00002926652,0.000055132634,0.000014669179,0.000070951224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987512,0.00046881498,0.00025788488,0.00024602277,0.000011566639,0.00026448365],"domain_scores_gemma":[0.99906373,0.00040889924,0.00015330092,0.0002709037,0.00008464595,0.000018501167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039950895,0.00017652403,0.000287234,0.000076640696,0.00023817329,0.000009890241,0.000092362214,0.00020826716,0.000057885143],"category_scores_gemma":[0.000120379984,0.00010955927,0.00008015075,0.0001605672,0.00024845597,0.000028867144,0.00006218697,0.0002389725,0.000053474676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043982427,0.00006615113,0.000086236614,0.0000070034016,0.00014331538,0.0000026502623,0.00012879015,0.00001656648,0.996422,0.0006468275,0.000081480684,0.0019591742],"study_design_scores_gemma":[0.0004459675,0.00037927975,0.0003528005,0.00006129265,0.000033774635,0.0001431431,0.000042867727,0.0000024505166,0.9941083,0.00003767554,0.0042801513,0.00011225124],"about_ca_topic_score_codex":0.00022672367,"about_ca_topic_score_gemma":0.00003385506,"teacher_disagreement_score":0.004198671,"about_ca_system_score_codex":0.000021889597,"about_ca_system_score_gemma":0.00002298141,"threshold_uncertainty_score":0.44676974},"labels":[],"label_agreement":null},{"id":"W2138578812","doi":"10.1093/cid/cir538","title":"Kinetics of the Antibody Response to Tetanus-Diphtheria-Acellular Pertussis Vaccine in Women of Childbearing Age and Postpartum Women","year":2011,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University; Robarts Clinical Trials; Capital District Health Authority; Canadian Institute for Advanced Research","funders":"Sanofi Pasteur; Sanofi","keywords":"Medicine; Diphtheria; Pertactin; Filamentous haemagglutinin adhesin; Tetanus; Toxoid; Pertussis toxin; Vaccination; Immunology; Antibody; Whooping cough; Pertussis vaccine; Immunization; Internal medicine","score_opus":0.02273584324340685,"score_gpt":0.29263678425441314,"score_spread":0.2699009410110063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138578812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984112,0.00037493435,0.000007872424,0.00008934527,0.000616683,0.00029014956,0.000051729843,0.000031743926,0.0001263337],"genre_scores_gemma":[0.9994943,0.00016148534,0.0000051614347,0.000108030355,0.000033724074,0.000033702232,0.0000052527394,0.000016987877,0.0001413508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982265,0.0005507182,0.0006520906,0.00026063796,0.000020144536,0.0002899026],"domain_scores_gemma":[0.99887544,0.00038576376,0.00020089967,0.00039373286,0.00006865652,0.000075484764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040985155,0.00015939138,0.0005177796,0.00012531015,0.00006255685,0.000008686699,0.00016180656,0.00016702985,0.00047920115],"category_scores_gemma":[0.0010639433,0.00011349684,0.000118914024,0.00027442726,0.00018392068,0.000050522933,0.00022316778,0.00017385905,0.000011658192],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019825692,0.0012785596,0.62736773,0.000034160308,0.0001527905,0.0000030143506,0.001165382,0.000002554213,0.36671156,0.000037814687,0.000051215517,0.0012126634],"study_design_scores_gemma":[0.0015143343,0.0014643489,0.9851545,0.00006791559,0.00004411433,0.0000072709395,0.00020995508,5.552626e-7,0.009575381,0.00020141894,0.0016311839,0.00012901853],"about_ca_topic_score_codex":0.0001151971,"about_ca_topic_score_gemma":0.000029221297,"teacher_disagreement_score":0.35778677,"about_ca_system_score_codex":0.000036527275,"about_ca_system_score_gemma":0.000032398384,"threshold_uncertainty_score":0.52469164},"labels":[],"label_agreement":null},{"id":"W2139347509","doi":"10.1128/iai.73.9.5995-6004.2005","title":"<i>Bordetella pertussis risA</i> , but Not <i>risS</i> , Is Required for Maximal Expression of Bvg-Repressed Genes","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Wellcome Trust","keywords":"Bordetella pertussis; Biology; Gene; Bordetella; Mutant; Virulence; Mutation; Genetics; Microbiology; Bacteria","score_opus":0.023550982970532427,"score_gpt":0.2682115869013008,"score_spread":0.24466060393076838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139347509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960882,0.0010166508,0.00062887697,0.00045081633,0.00074661436,0.00028419896,0.0001056724,0.00008859537,0.00059038843],"genre_scores_gemma":[0.9968836,0.0010556378,0.00018526764,0.0003034617,0.0001147367,0.000050239523,0.00006553326,0.000017659691,0.001323877],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989723,0.00015955845,0.00037491295,0.00022943226,0.000018565688,0.0002452467],"domain_scores_gemma":[0.99915296,0.00012667863,0.0001895605,0.00031510176,0.00017919243,0.000036532285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002663,0.00018592043,0.0003081974,0.00011650626,0.0004581218,0.000026359341,0.00008475027,0.0002851169,0.0006233009],"category_scores_gemma":[0.00013141322,0.000160267,0.00014520549,0.00011087804,0.0001235173,0.00023311914,0.000087995984,0.00017782513,0.000035862755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041322404,0.00022392008,0.0031073862,0.000037577072,0.00006028947,3.755367e-8,0.00023420517,0.0000052640617,0.9653859,0.00003628375,0.005082733,0.025413161],"study_design_scores_gemma":[0.0012654008,0.00020913973,0.01017084,0.000024834118,0.000043080094,0.000024214507,0.0000488752,0.000011981115,0.72641957,0.000028047552,0.2616161,0.00013793462],"about_ca_topic_score_codex":0.0014113791,"about_ca_topic_score_gemma":0.000060724567,"teacher_disagreement_score":0.25653338,"about_ca_system_score_codex":0.000022669978,"about_ca_system_score_gemma":0.000037495618,"threshold_uncertainty_score":0.6824708},"labels":[],"label_agreement":null},{"id":"W2140925691","doi":"10.1093/jpids/pit058","title":"Comparison of the Safety and Immunogenicity of a Novel Quadrivalent Meningococcal ACWY-Tetanus Toxoid Conjugate Vaccine and a Marketed Quadrivalent Meningococcal ACWY-Diphtheria Toxoid Conjugate Vaccine in Healthy Individuals 10-25 Years of Age","year":2013,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Capital District Health Authority; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Medicine; Toxoid; Tetanus; Immunogenicity; Conjugate vaccine; Diphtheria; Meningococcal disease; Vaccination; Diphtheria toxin; Meningococcal vaccine; Virology; Conjugate; Immunization; Neisseria meningitidis; Immunology; Microbiology; Antigen; Toxin; Biology","score_opus":0.012359179984254414,"score_gpt":0.2680724809216498,"score_spread":0.2557133009373954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140925691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99254394,0.005163807,0.000038798356,0.00032865015,0.0007814639,0.0008773048,0.00023347075,0.000016546408,0.000016025453],"genre_scores_gemma":[0.9971537,0.0024943992,0.000062474326,0.000055023753,0.00013531125,0.000019864594,0.000009885412,0.000027271477,0.00004209448],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996721,0.0006442962,0.0018101017,0.00027774632,0.00013568137,0.00041114714],"domain_scores_gemma":[0.9961913,0.00057924155,0.0023545579,0.000408297,0.00037085116,0.00009570058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008946145,0.00034148505,0.0012149728,0.00015625432,0.00025861117,0.000031716216,0.00040063282,0.00030892453,0.00026898066],"category_scores_gemma":[0.00034016086,0.00023140604,0.0006373727,0.0005616093,0.00021065513,0.00019465189,0.00046399698,0.0006155424,0.0000016555261],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011217624,0.0012392857,0.84005696,0.0002392107,0.0007461226,4.4461763e-7,0.0013604135,0.000093045455,0.15363058,0.000025662044,0.00093476655,0.0005517291],"study_design_scores_gemma":[0.009999582,0.001172748,0.98387724,0.00011533232,0.00084916747,0.00023903213,0.0004992939,0.00006942302,0.002440198,0.00007111358,0.00042268794,0.00024415136],"about_ca_topic_score_codex":0.00074906193,"about_ca_topic_score_gemma":0.00008347463,"teacher_disagreement_score":0.15119039,"about_ca_system_score_codex":0.00013557241,"about_ca_system_score_gemma":0.0002623441,"threshold_uncertainty_score":0.94364643},"labels":[],"label_agreement":null},{"id":"W2141078296","doi":"10.1128/mbio.01625-14","title":"Human Factor H (FH) Impairs Protective Meningococcal Anti-FHbp Antibody Responses and the Antibodies Enhance FH Binding","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Immunogenicity; Antibody; Antigen; Epitope; Biology; Genetically modified mouse; Transgene; Complement system; Virology; Mutant; Microbiology; Complement factor B; Antiserum; Molecular biology; Immunology; Gene; Biochemistry","score_opus":0.013311867131225747,"score_gpt":0.29262731453064866,"score_spread":0.27931544739942293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141078296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764776,0.0003045841,0.00016649855,0.00034936971,0.0005451265,0.00041092667,0.00003334104,0.00010542608,0.00043695694],"genre_scores_gemma":[0.99800926,0.000040216724,0.000020748323,0.00003411766,0.00009871445,0.000033428856,0.000023151653,0.000015817166,0.0017245638],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986521,0.00051062804,0.00022561604,0.00029399063,0.000015722393,0.00030194386],"domain_scores_gemma":[0.9993158,0.00024066682,0.00012729038,0.00023995429,0.00005852208,0.00001778257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045093382,0.00019462136,0.0003327097,0.00010312611,0.00086964486,0.0000698623,0.000135554,0.00017989702,0.00023610958],"category_scores_gemma":[0.00020699877,0.00012386416,0.0000800988,0.00010839534,0.000411294,0.00011734374,0.00011819907,0.00027377173,0.00015074466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020444792,0.00003934754,0.011092914,0.000012723149,0.00010489662,4.3867877e-7,0.00058200833,1.17929694e-7,0.9858096,0.0010792697,0.00025777702,0.0008164552],"study_design_scores_gemma":[0.002687835,0.0004719761,0.34046376,0.00007960214,0.000059615064,0.000098520875,0.00032445684,0.000005097279,0.6334457,0.00038968842,0.021609403,0.00036435484],"about_ca_topic_score_codex":0.00038652643,"about_ca_topic_score_gemma":0.00004071656,"teacher_disagreement_score":0.3523639,"about_ca_system_score_codex":0.000015938725,"about_ca_system_score_gemma":0.00001565601,"threshold_uncertainty_score":0.6688693},"labels":[],"label_agreement":null},{"id":"W2141277802","doi":"10.2807/1560-7917.es2014.19.5.20688","title":"A cocoon immunisation strategy against pertussis for infants: does it make sense for Ontario?","year":2014,"lang":"en","type":"article","venue":"Eurosurveillance","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Ontario","funders":"","keywords":"Medicine; Incidence (geometry); Epidemiology; Pediatrics; Disease; Booster (rocketry); Demography; Internal medicine","score_opus":0.017207976118814697,"score_gpt":0.25144730860513287,"score_spread":0.23423933248631817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141277802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935757,0.00012359943,0.001986758,0.00047385122,0.0019978348,0.0005773028,0.00016989763,0.000091967384,0.0010030901],"genre_scores_gemma":[0.99241185,0.000048720744,0.00016155253,0.00035722315,0.00015193719,0.00013544367,0.00040734903,0.000024144618,0.0063017686],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989936,0.00013719634,0.0002899425,0.0002782495,0.000011396171,0.00028965986],"domain_scores_gemma":[0.99902767,0.0003519071,0.00014062207,0.00028492112,0.00017780536,0.000017081566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039302712,0.00017040275,0.00026402887,0.000052366988,0.00030744637,0.000047261332,0.000091232345,0.00015899693,0.00012194281],"category_scores_gemma":[0.00025659468,0.00012898451,0.00010290409,0.00007037002,0.00004913923,0.0000654638,0.000026791036,0.00010749932,0.000040123497],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009482098,0.00014440944,0.015588757,0.000090663685,0.00014953107,2.3297402e-7,0.0008171192,0.000054291744,0.9454621,0.0013905478,0.006907157,0.028446957],"study_design_scores_gemma":[0.0024673701,0.00045026583,0.11158579,0.000029919773,0.00001673036,0.0000141373,0.00007154522,0.00007953737,0.0111977635,0.00022803037,0.8735797,0.00027920946],"about_ca_topic_score_codex":0.0010909812,"about_ca_topic_score_gemma":0.020541977,"teacher_disagreement_score":0.93426436,"about_ca_system_score_codex":0.000038765687,"about_ca_system_score_gemma":0.00005228014,"threshold_uncertainty_score":0.9973306},"labels":[],"label_agreement":null},{"id":"W2141482343","doi":"10.1128/iai.03123-14","title":"Selection for a CEACAM Receptor-Specific Binding Phenotype during Neisseria gonorrhoeae Infection of the Human Genital Tract","year":2015,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Neisseria gonorrhoeae; Biology; Bacterial adhesin; Pathogen; Microbiology; Immunology; Phenotype; Context (archaeology); Chlamydia trachomatis; Sexually transmitted disease; Neisseriaceae; Innate immune system; Immune system; Virulence; Antibiotics; Genetics; Gene","score_opus":0.03507488449390977,"score_gpt":0.27098640010210084,"score_spread":0.23591151560819107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141482343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99632394,0.00013938833,0.00011057631,0.000026649359,0.0025325438,0.00035621977,0.000015306561,0.000094653165,0.00040074653],"genre_scores_gemma":[0.99910575,0.000089949295,0.000012893651,0.000005033846,0.00012869277,0.00003876225,0.0000563782,0.00001685656,0.0005457091],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991256,0.00021940148,0.00028981184,0.00016618385,0.000010221279,0.00018877372],"domain_scores_gemma":[0.99936116,0.00004373675,0.00020010017,0.0001725508,0.00019771095,0.000024753295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031352844,0.00015413096,0.00019522724,0.000145939,0.000813329,0.000039373368,0.000057745026,0.00021813669,0.00014858942],"category_scores_gemma":[0.000086936605,0.00012539206,0.00011340464,0.00029994675,0.00008362289,0.00026763728,0.000053728345,0.0003004493,0.000024347126],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010818445,0.00017290076,0.13785924,0.000024074656,0.00005514902,3.5236485e-9,0.00026179996,0.000008165626,0.8595395,0.00024053732,0.00039181166,0.0013386107],"study_design_scores_gemma":[0.0020611382,0.00046866445,0.70832723,0.000034318786,0.000054209013,0.00008816036,0.00010357286,0.0000055991054,0.22904724,0.00013541197,0.059465706,0.00020872768],"about_ca_topic_score_codex":0.0025750583,"about_ca_topic_score_gemma":0.0003242347,"teacher_disagreement_score":0.63049227,"about_ca_system_score_codex":0.00009626106,"about_ca_system_score_gemma":0.00003360255,"threshold_uncertainty_score":0.62555516},"labels":[],"label_agreement":null},{"id":"W2141570244","doi":"10.1128/jcm.44.4.1530-1535.2006","title":"Invasive <i>Haemophilus influenzae</i> in Manitoba, Canada, in the Postvaccination Era","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; University of Manitoba; Public Health Agency of Canada","funders":"National Institutes of Health; Public Health Agency of Canada; University of Manitoba","keywords":"Serotype; Multilocus sequence typing; Haemophilus influenzae; Biology; Typing; Microbiology; Genotype; Ampicillin; Virology; Molecular epidemiology; Haemophilus; Antibiotics; Bacteria; Genetics; Gene","score_opus":0.027894485526710137,"score_gpt":0.2914951388595407,"score_spread":0.26360065333283056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141570244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930168,0.0009278206,0.00000345801,0.0030617185,0.00248915,0.00015041007,0.000020693868,0.000003465607,0.00032648927],"genre_scores_gemma":[0.99804616,0.00012751122,0.00002755023,0.0013494865,0.0003403808,0.0000033391884,0.000033119228,0.0000072398957,0.00006522337],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969528,0.0009319411,0.0016692127,0.00015873552,0.000012454027,0.00027488696],"domain_scores_gemma":[0.997578,0.0014079821,0.0006662595,0.0001585298,0.00017542586,0.000013777675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014104674,0.0001413096,0.000552739,0.00017300213,0.00005784574,0.000012550013,0.0003382098,0.00036017463,0.000115987794],"category_scores_gemma":[0.0005582514,0.00009229187,0.0001419632,0.00022119381,0.000084166015,0.00009788498,0.0000435395,0.000958709,0.000025568152],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008040411,0.0008151638,0.5491152,0.000013763449,0.000099803605,0.000088374494,0.00009195654,0.000079928446,0.38174888,0.0007698888,0.062349778,0.0040232567],"study_design_scores_gemma":[0.0036077027,0.00045065075,0.8632743,0.00004610021,0.000026487103,0.0014815337,0.00017328633,2.3839628e-7,0.003678127,0.00068792864,0.12643543,0.00013823588],"about_ca_topic_score_codex":0.1279632,"about_ca_topic_score_gemma":0.82433265,"teacher_disagreement_score":0.69636947,"about_ca_system_score_codex":0.00008826075,"about_ca_system_score_gemma":0.00052813307,"threshold_uncertainty_score":0.87784374},"labels":[],"label_agreement":null},{"id":"W2141592371","doi":"10.1016/s0303-8467(02)00126-9","title":"A case of ‘circling seizures’ and an intratumoral abscess","year":2003,"lang":"en","type":"article","venue":"Clinical Neurology and Neurosurgery","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Abscess; Chills; Meningioma; Presentation (obstetrics); Brain abscess; Surgery; Bacteroides fragilis; Past medical history; Hysterectomy; Antibiotics","score_opus":0.05140150066512608,"score_gpt":0.33580267540130965,"score_spread":0.28440117473618354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141592371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970892,0.00042938796,0.00000813204,0.0001549096,0.0020620138,0.00008055371,0.000010532847,0.000035714264,0.00012954397],"genre_scores_gemma":[0.99875027,0.0003416839,0.000009041269,0.00076210254,0.00006457958,0.000004341614,0.000005182023,0.000012123617,0.000050675415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99796367,0.0008761645,0.0005412565,0.00038932773,0.000006384759,0.00022318827],"domain_scores_gemma":[0.9984083,0.0011401733,0.00014847559,0.00020701245,0.000038954196,0.000057071167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005889835,0.00013683067,0.00041737288,0.000075181735,0.00016679933,0.000012244619,0.000045146815,0.0003317017,0.00009055284],"category_scores_gemma":[0.0005602993,0.000121375415,0.000068389316,0.000082974184,0.0005035444,0.000095521325,0.000044158347,0.00046906114,0.000006072276],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015757704,0.0011509714,0.80498606,0.00007331308,0.0001364237,0.0021866017,0.00011491231,0.0000033851452,0.16621183,0.0069970973,0.0016019163,0.01496174],"study_design_scores_gemma":[0.0066484483,0.0060528936,0.74696195,0.00003209653,0.00031143907,0.156094,0.00008683667,0.00006695005,0.016656285,0.0035820976,0.06253502,0.0009719898],"about_ca_topic_score_codex":0.000023325858,"about_ca_topic_score_gemma":0.000017593919,"teacher_disagreement_score":0.1539074,"about_ca_system_score_codex":5.23164e-7,"about_ca_system_score_gemma":0.000024187319,"threshold_uncertainty_score":0.4949546},"labels":[],"label_agreement":null},{"id":"W2141715478","doi":"10.1503/cmaj.090310","title":"<i>Streptococcus pneumoniae</i> meningitis in an adult with normal cerebrospinal fluid","year":2011,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Streptococcus pneumoniae; Medicine; Cerebrospinal fluid; Meningitis; Emergency department; Antibiotics; Past medical history; Medical history; Pediatrics; Surgery; Internal medicine; Microbiology; Psychiatry","score_opus":0.007600279589467242,"score_gpt":0.20508962019126076,"score_spread":0.19748934060179352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141715478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945227,0.000052487852,0.000014524664,0.0011904967,0.00094695424,0.000078726385,0.00002260227,0.000019384626,0.0031521423],"genre_scores_gemma":[0.99857783,0.000029511957,0.000030538315,0.0007217899,0.00029685942,0.0000123368745,0.000023719476,0.000011964852,0.0002954367],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987859,0.00018315717,0.00032742886,0.00014624011,0.0000732623,0.0004840212],"domain_scores_gemma":[0.99911827,0.000026722411,0.00014248752,0.000087270186,0.00028610346,0.000339121],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00044479346,0.00011915305,0.00018612757,0.00017103451,0.0002630988,0.000042408334,0.00016990276,0.00040968836,0.011095453],"category_scores_gemma":[0.00015528068,0.00009959579,0.000044109867,0.00017132287,0.00004065034,0.0002558328,0.000010451345,0.00075584196,0.00021385401],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049395647,0.00009492941,0.97443527,0.000002694234,0.00009923682,0.00012050693,0.00074105547,7.168207e-7,0.0052866135,0.00037562352,0.008108444,0.01068552],"study_design_scores_gemma":[0.0033709602,0.00093508296,0.89901626,0.00010171932,0.000036647158,0.0018091854,0.0007295571,0.000009501801,0.0024844822,0.000081355625,0.09105843,0.00036683326],"about_ca_topic_score_codex":0.0112832505,"about_ca_topic_score_gemma":0.21317221,"teacher_disagreement_score":0.20188896,"about_ca_system_score_codex":0.0002948822,"about_ca_system_score_gemma":0.00088790216,"threshold_uncertainty_score":0.9953007},"labels":[],"label_agreement":null},{"id":"W2141763435","doi":"10.5539/gjhs.v5n6p54","title":"Subdural Empyema in Children","year":2013,"lang":"en","type":"review","venue":"Global Journal of Health Science","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Subdural empyema; Medicine; Craniotomy; Empyema; Etiology; Antibiotics; Conservative management; Septic shock; Intensive care medicine; Intravenous antibiotics; Antibiotic therapy; Pediatrics; Cystourethrography; Surgery; Psychiatry; Internal medicine","score_opus":0.03908549014432217,"score_gpt":0.37563626608077283,"score_spread":0.33655077593645066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141763435","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016442938,0.9805584,0.000003857832,0.00008336553,0.0024999985,0.00031108505,0.000020744177,0.0000068133822,0.0000728134],"genre_scores_gemma":[0.0024235044,0.9973402,0.000059064663,0.000037146514,0.00009192124,0.0000038334333,0.0000070706133,0.0000048974584,0.00003236497],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978646,0.00018698515,0.0011914001,0.00020723573,0.00004447051,0.00050529995],"domain_scores_gemma":[0.9983755,0.000021455447,0.0012039766,0.00017994369,0.00015511924,0.000064030726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013054251,0.00020068436,0.0012507696,0.0003080371,0.00020541968,0.000050887662,0.0006714369,0.00018561895,0.00016761482],"category_scores_gemma":[0.00006349262,0.00013059794,0.00020916438,0.0009074781,0.00024398144,0.00028164237,0.00010483111,0.0004643064,0.00023888555],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029608802,0.00005735857,0.0047077895,0.00029766798,0.000030417668,8.1325777e-7,0.0000051996685,1.8475201e-7,0.000010201708,0.00015789714,0.0019794588,0.99275005],"study_design_scores_gemma":[0.0004722911,0.00033401893,0.03537579,0.0043725795,0.000055494926,0.013886425,0.000013172028,5.0432664e-8,0.00000311698,0.00007449513,0.94519293,0.00021964568],"about_ca_topic_score_codex":0.0005002099,"about_ca_topic_score_gemma":0.000014921971,"teacher_disagreement_score":0.9925304,"about_ca_system_score_codex":0.00041820388,"about_ca_system_score_gemma":0.0022892726,"threshold_uncertainty_score":0.5325629},"labels":[],"label_agreement":null},{"id":"W2141943331","doi":"10.1128/iai.71.1.275-286.2003","title":"Age-Related Disparity in Functional Activities of Human Group C Serum Anticapsular Antibodies Elicited by Meningococcal Polysaccharide Vaccine","year":2002,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"National Institute of Allergy and Infectious Diseases; U.S. Food and Drug Administration; MacroGenics","keywords":"Neisseria meningitidis; Antibody; Titer; Immunology; Meningococcal disease; Avidity; Neisseriaceae; Meningococcal vaccine; Microbiology; Biology; Immunity; Antigen; Medicine; Immunization; Virology; Immune system; Bacteria; Antibiotics","score_opus":0.017184873590237893,"score_gpt":0.2438987586831618,"score_spread":0.2267138850929239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141943331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980154,0.00069192157,0.000039969047,0.000082936516,0.00050147297,0.00014659978,0.000033252563,0.00008539624,0.0004030652],"genre_scores_gemma":[0.9988877,0.00042432008,0.0000027944252,0.000019418916,0.000018425,0.000011469701,0.00011401396,0.000011568812,0.00051027344],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988999,0.0002692813,0.00039395288,0.00019057216,0.000019922867,0.00022636798],"domain_scores_gemma":[0.99953634,0.00007687454,0.00014275446,0.0001785461,0.000044860375,0.00002064247],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022296439,0.00018283991,0.00034322654,0.00025012626,0.0003757137,0.000024849265,0.000054086537,0.00025356846,0.001552213],"category_scores_gemma":[0.000047080448,0.00017146973,0.000074952404,0.00027972387,0.00014518584,0.00027559337,0.000077564364,0.00044272927,0.00001700652],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004029573,0.0004070981,0.2461188,0.000017562299,0.00009789227,3.654675e-7,0.00018403002,0.0000013214095,0.7513226,0.00038750237,0.00059330347,0.0008291798],"study_design_scores_gemma":[0.0018315684,0.0002740536,0.9242305,0.00003884973,0.000038602087,0.000044365926,0.00008351911,0.000024516254,0.071645126,0.0001359599,0.0014725274,0.00018041402],"about_ca_topic_score_codex":0.006634168,"about_ca_topic_score_gemma":0.00063020457,"teacher_disagreement_score":0.6796775,"about_ca_system_score_codex":0.000028646635,"about_ca_system_score_gemma":0.0000043503182,"threshold_uncertainty_score":0.99998075},"labels":[],"label_agreement":null},{"id":"W2142000833","doi":"10.1371/journal.pone.0055486","title":"Seroprevalence of Bactericidal, Specific IgG Antibodies and Incidence of Meningitis Due to Group A Neisseria meningitidis by Age in Burkina Faso 2008","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sanofi Pasteur; Faculty of Medicine and Dentistry, University of Alberta; Medical Research Council; Sanofi; GlaxoSmithKline; Alexion Pharmaceuticals; Pfizer","keywords":"Seroprevalence; Neisseria meningitidis; Serology; Antibody; Incidence (geometry); Meningitis; Meningococcal vaccine; Immunoglobulin G; Virology; Medicine; Neisseria; Biology; Microbiology; Immunization; Immunology; Pediatrics; Bacteria","score_opus":0.01915067061103716,"score_gpt":0.21878331102037227,"score_spread":0.1996326404093351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142000833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99771714,0.0015563644,0.000018783869,0.00008954297,0.00009035439,0.0003411922,0.00005537657,0.000022427703,0.000108790526],"genre_scores_gemma":[0.99791706,0.00095079,0.0007237703,0.000011460612,0.000015222998,0.000042747626,0.000036921072,0.0000130872895,0.00028895447],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990422,0.00008334676,0.00037472852,0.0002458227,0.00002229105,0.00023158072],"domain_scores_gemma":[0.99944514,0.00008441248,0.00014062913,0.00021208644,0.000091373775,0.00002634168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009549046,0.00015016484,0.00046763427,0.00013912962,0.000055596993,0.000018167573,0.00013177823,0.00011581231,0.0007472535],"category_scores_gemma":[0.000056231213,0.0001432668,0.00003042738,0.00021287848,0.00012284193,0.00020518289,0.00011856937,0.00011218391,0.000046083474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051382816,0.0003792622,0.039636552,0.00010094113,0.00008132046,0.0000015664058,0.00057789864,2.7044968e-7,0.958127,0.000040457053,0.0005866476,0.00041665335],"study_design_scores_gemma":[0.00048341078,0.0004480244,0.31686845,0.00042487934,0.000030698546,0.000022743488,0.00017271613,0.0000022052855,0.681081,0.000048209833,0.0002476811,0.00017000195],"about_ca_topic_score_codex":0.0013691088,"about_ca_topic_score_gemma":0.00013987711,"teacher_disagreement_score":0.2772319,"about_ca_system_score_codex":0.000014849188,"about_ca_system_score_gemma":0.000008308304,"threshold_uncertainty_score":0.81819016},"labels":[],"label_agreement":null},{"id":"W2142065480","doi":"10.1186/1465-9921-7-57","title":"Inhalation of β2 agonists impairs the clearance of nontypable Haemophilus influenzae from the murine respiratory tract","year":2006,"lang":"en","type":"article","venue":"Respiratory Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Inhalation; Salbutamol; Salmeterol; Respiratory tract; Medicine; Haemophilus influenzae; Immunology; Nasal administration; Pharmacology; Bronchodilator; COPD; Propranolol; Respiratory system; Internal medicine; Antibiotics; Biology; Anesthesia; Asthma; Microbiology","score_opus":0.06584585332057138,"score_gpt":0.34022167112339635,"score_spread":0.27437581780282494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142065480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991627,0.005886069,0.0000069174025,0.00027487372,0.00026680727,0.00042352924,0.000078703386,0.000026508467,0.0014096124],"genre_scores_gemma":[0.99926436,0.000029498231,0.000005517662,0.00008686753,0.000251729,0.00004009365,0.000017100347,0.000020395184,0.0002844658],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99747723,0.0011926439,0.0005719732,0.000266194,0.00010908255,0.00038286435],"domain_scores_gemma":[0.99763805,0.000918452,0.0002229836,0.0007411857,0.00046081276,0.000018499657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021109295,0.00014770919,0.00028996202,0.00014442486,0.00050716,0.000029097771,0.00046625585,0.00024728218,0.0004353568],"category_scores_gemma":[0.00028116503,0.00008956981,0.00012372229,0.0005497203,0.00066484744,0.0001402649,0.00014943002,0.0006388694,0.00013319566],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044748047,0.0002630477,0.09200152,0.000026777961,0.0000725092,0.0000013828926,0.00014272523,0.00008808338,0.8949504,0.001110306,0.008652217,0.002243558],"study_design_scores_gemma":[0.0009680982,0.00034103115,0.6282665,0.000051707157,0.000016064327,0.0000038264848,0.000112788664,0.0000045320694,0.2033369,0.00058000046,0.16622168,0.0000968727],"about_ca_topic_score_codex":0.0036967203,"about_ca_topic_score_gemma":0.00053173513,"teacher_disagreement_score":0.6916135,"about_ca_system_score_codex":0.000050667888,"about_ca_system_score_gemma":0.00021381467,"threshold_uncertainty_score":0.558836},"labels":[],"label_agreement":null},{"id":"W2142373856","doi":"10.1093/cid/ciu597","title":"The Impact of the Meningococcal Serogroup C Conjugate Vaccine in Canada Between 2002 and 2012","year":2014,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Children's Hospital of Eastern Ontario; University of Alberta; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; Stollery Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Meningococcal vaccine; Virology; Conjugate vaccine; Meningococcal disease; Conjugate; Neisseriaceae; Meningococcal Infections; Meningococcal meningitis; Neisseria meningitidis; Microbiology; Immunogenicity; Immunology; Antibiotics; Immunization; Antibody; Bacteria","score_opus":0.015487016391374982,"score_gpt":0.29957147687112234,"score_spread":0.28408446047974734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142373856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762976,0.0009330396,0.000005255088,0.00019722647,0.0007871567,0.00019260963,0.000060802016,0.000018327179,0.00017583359],"genre_scores_gemma":[0.99954534,0.00014822774,2.163512e-7,0.000045371246,0.00013036952,0.000014197757,0.000009909158,0.000008937246,0.000097454904],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985484,0.000523176,0.0004929879,0.0001757889,0.000014980037,0.0002446833],"domain_scores_gemma":[0.99784964,0.0015798139,0.00018462993,0.00027865762,0.000056059347,0.00005122416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003131442,0.0001345982,0.0003462269,0.000023187811,0.00022789092,0.000017427694,0.000141241,0.00010729019,0.00020399893],"category_scores_gemma":[0.0005430889,0.00006888923,0.00015476771,0.00012959898,0.00015258428,0.000059622776,0.000115324015,0.0002570137,0.000013365361],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041334686,0.00007721156,0.98645973,0.000004024064,0.00014116729,1.0239524e-7,0.0000061294522,0.000008526659,0.00043263054,0.000075354954,0.004807939,0.007945818],"study_design_scores_gemma":[0.0012933202,0.00023115134,0.99261755,0.000018862234,0.00006430226,0.0000037174814,0.000012004787,0.000010179727,0.000093029135,0.00020326502,0.0053666383,0.00008600554],"about_ca_topic_score_codex":0.27705228,"about_ca_topic_score_gemma":0.40516666,"teacher_disagreement_score":0.12811436,"about_ca_system_score_codex":0.00005628884,"about_ca_system_score_gemma":0.00024567338,"threshold_uncertainty_score":0.72776186},"labels":[],"label_agreement":null},{"id":"W2142726345","doi":"10.1128/cvi.00322-09","title":"Dose Response of Attenuated <i>Bordetella pertussis</i> BPZE1-Induced Protection in Mice","year":2010,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Manitoba","keywords":"Bordetella pertussis; Whooping cough; Pertussis vaccine; Immunity; Medicine; Immunology; Bordetella; Antigen; Nasal administration; Pertussis toxin; Vaccination; Microbiology; Virology; Immunization; Immune system; Biology; Bacteria; Internal medicine; G protein","score_opus":0.030160122371359746,"score_gpt":0.3121213599169905,"score_spread":0.2819612375456308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142726345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99479544,0.00035238938,0.000007625018,0.0016511272,0.0027249316,0.0003315955,0.0000089822815,0.000055922876,0.000071997456],"genre_scores_gemma":[0.9990594,0.0002331318,0.000031986492,0.00007243178,0.00008729396,0.000034812838,0.000015785638,0.000016405414,0.0004487441],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976798,0.00069861795,0.000907252,0.0003973155,0.000011111718,0.00030587724],"domain_scores_gemma":[0.99864835,0.00061814854,0.00023946672,0.00033019375,0.00013678453,0.000027079019],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010720389,0.00019803915,0.0005800801,0.00020989575,0.000107971595,0.000008922108,0.00016816152,0.00071293296,0.00037064322],"category_scores_gemma":[0.0011363477,0.00015963818,0.000113529815,0.00027283948,0.0001662494,0.00008566276,0.00013705053,0.0010192328,0.00009717704],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0054378686,0.0003859126,0.020717863,0.000009036973,0.00009476672,0.0000015771396,0.00006386018,1.038836e-7,0.93866235,0.000088853456,0.00012256694,0.034415215],"study_design_scores_gemma":[0.0055400296,0.001461166,0.8141004,0.000026448979,0.00003695218,0.0001729344,0.00006283181,0.000007324861,0.15990907,0.00012170069,0.018358564,0.000202617],"about_ca_topic_score_codex":0.00058407127,"about_ca_topic_score_gemma":0.00040050902,"teacher_disagreement_score":0.7933825,"about_ca_system_score_codex":0.0000070874703,"about_ca_system_score_gemma":0.000066795204,"threshold_uncertainty_score":0.6509856},"labels":[],"label_agreement":null},{"id":"W2143148282","doi":"10.1128/aac.01077-09","title":"Epidemiology of Invasive Meningococcal Disease with Decreased Susceptibility to Penicillin in Ontario, Canada, 2000 to 2006","year":2010,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Health and Long Term Care; Provincial Laboratory of Public Health; Public Health Ontario; University of Toronto; Toronto Public Health","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Penicillin; Neisseria meningitidis; Meningococcal disease; Confidence interval; Medicine; Epidemiology; Odds ratio; Incidence (geometry); Poisson regression; Population; Internal medicine; Biology; Microbiology; Demography; Antibiotics; Environmental health; Bacteria; Genetics","score_opus":0.013299116611458073,"score_gpt":0.2421595459046423,"score_spread":0.22886042929318423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143148282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996795,0.000012349872,0.000018335553,0.002293217,0.00030067607,0.0004209867,0.00008598375,0.000009651669,0.00006377331],"genre_scores_gemma":[0.99527436,0.000011187455,0.00023909935,0.003658136,0.000025685657,0.000015105021,0.0000650876,0.0000134692145,0.00069789373],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891275,0.000077529796,0.00032417217,0.00035028026,0.00001316973,0.00032210725],"domain_scores_gemma":[0.9994206,0.00009662121,0.00008165923,0.00022280627,0.000068048845,0.00011029879],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017817054,0.00018266737,0.00039193506,0.00008063193,0.00007914027,0.0000040212162,0.00012228981,0.00012259347,0.0015025592],"category_scores_gemma":[0.00006204893,0.00014520438,0.000040843846,0.00011813498,0.000079417114,0.000037987422,0.00003890512,0.00021622324,0.000010318269],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009966354,0.00016231833,0.7933207,0.000008944247,0.00004469508,0.0000021961584,0.00026501284,0.00001040006,0.19375527,0.000025054183,0.010924796,0.00048395275],"study_design_scores_gemma":[0.0014217063,0.00017983561,0.93597656,0.000032827127,0.000014610429,0.00001023374,0.000018832783,4.947607e-7,0.027140634,0.00001349165,0.035009634,0.00018115519],"about_ca_topic_score_codex":0.91436154,"about_ca_topic_score_gemma":0.9935497,"teacher_disagreement_score":0.16661464,"about_ca_system_score_codex":0.0000723159,"about_ca_system_score_gemma":0.0006683916,"threshold_uncertainty_score":0.9994102},"labels":[],"label_agreement":null},{"id":"W2143908501","doi":"10.4049/jimmunol.1100718","title":"Vigorous Response of Human Innate Functioning IgM Memory B Cells upon Infection by <i>Neisseria gonorrhoeae</i>","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Neisseria gonorrhoeae; Innate immune system; Immunology; Biology; Immune system; Microbiology; Immunity; Gonorrhea; TLR9; Virology","score_opus":0.010884275715137627,"score_gpt":0.24173651883138764,"score_spread":0.23085224311625002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143908501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874215,0.0069943215,0.00013602896,0.00016483567,0.004990229,0.000100106874,0.000007152828,0.000023208737,0.00016258613],"genre_scores_gemma":[0.9984681,0.00059037516,0.000010241784,0.000044570832,0.00014476613,0.0000030530564,0.0000085150605,0.000019259025,0.00071110897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975958,0.0013002701,0.00067245826,0.00008006428,0.0000130535645,0.0003383927],"domain_scores_gemma":[0.9984045,0.000261005,0.00083398656,0.0002664749,0.00021300829,0.000021001471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018467675,0.00017287486,0.00039057143,0.00022974511,0.00033516486,0.000009767512,0.00021023469,0.0002812776,0.0006795285],"category_scores_gemma":[0.00010347587,0.000120754594,0.00013690643,0.00021102226,0.00017095046,0.00029046633,0.000082255756,0.0005583224,0.00010216686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027233616,0.0002135243,0.0015439696,0.0000065225527,0.0003084965,1.321119e-7,0.0006150589,0.000013442999,0.9902524,0.000058196256,0.0029496127,0.0013153107],"study_design_scores_gemma":[0.0016372993,0.0016519435,0.036264844,0.000035115863,0.0002015184,0.001278682,0.00039003923,3.3349576e-7,0.91643924,0.00004826409,0.041901905,0.00015080353],"about_ca_topic_score_codex":0.00039744822,"about_ca_topic_score_gemma":0.000018038187,"teacher_disagreement_score":0.07381312,"about_ca_system_score_codex":0.000064432184,"about_ca_system_score_gemma":0.000048112597,"threshold_uncertainty_score":0.7440361},"labels":[],"label_agreement":null},{"id":"W2144330742","doi":"10.1016/s1473-3099(13)70170-1","title":"Haemophilus influenzae serotype a as a cause of serious invasive infections","year":2013,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":132,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Lakehead University; NOSM University","funders":"Imperial College London; Wellcome Trust","keywords":"Haemophilus influenzae; Microbiology; Serotype; Virology; Medicine; Biology; Antibiotics","score_opus":0.04750628735288105,"score_gpt":0.3235070093891819,"score_spread":0.2760007220363009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144330742","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025822686,0.96742755,0.0000022918052,0.000047874517,0.0020347764,0.0018290958,0.0006170417,0.00043694465,0.0017817644],"genre_scores_gemma":[0.006562265,0.9905118,0.0000014108447,0.00014250474,0.0005905618,0.0010305305,0.00037620304,0.000079828314,0.0007049245],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974876,0.00070148864,0.00077818683,0.00044717843,0.00003800926,0.0005475549],"domain_scores_gemma":[0.9970433,0.0007623596,0.00078386284,0.0010957465,0.00025119056,0.00006352886],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00014174037,0.0006419685,0.0023564796,0.00031529163,0.00047575874,0.00008357805,0.00048544622,0.00057372137,0.0014187613],"category_scores_gemma":[0.00054405554,0.0004100303,0.0007308038,0.00066046184,0.00033558247,0.00017858298,0.00029889971,0.00070141506,0.0029884134],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002016725,0.0030622245,0.009480028,0.026508559,0.016124785,0.000027663162,0.00058708846,0.000040410243,0.00067389075,0.0065159863,0.09550852,0.8412692],"study_design_scores_gemma":[0.00080680434,0.00043055162,0.0006050448,0.0022900305,0.0030414523,0.0008122907,0.000016812457,8.547017e-8,0.000040783172,0.00070100575,0.9907694,0.00048573],"about_ca_topic_score_codex":0.001520777,"about_ca_topic_score_gemma":0.00031697773,"teacher_disagreement_score":0.8952609,"about_ca_system_score_codex":0.00011279882,"about_ca_system_score_gemma":0.00058373436,"threshold_uncertainty_score":0.99983513},"labels":[],"label_agreement":null},{"id":"W2144649626","doi":"","title":"Age related clinical manifestation of acute bacterial meningitis in children presenting to emergency department of a tertiary care hospital.","year":2014,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Vomiting; Emergency department; Pediatrics; Irritability; Meningitis; Retrospective cohort study; Population; Sore throat; Internal medicine; Surgery","score_opus":0.008969346277437593,"score_gpt":0.2507503925744785,"score_spread":0.24178104629704092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144649626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737906,0.000053154774,0.000007731355,0.00005900965,0.001507836,0.00073379814,0.00006183237,0.000020615407,0.00017694871],"genre_scores_gemma":[0.9991254,0.000045056233,0.000031193944,0.000003213812,0.000052320036,0.00024368084,0.00037427258,0.000009531096,0.00011528966],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880993,0.0001898456,0.0005983738,0.00018460347,0.000013850861,0.00020340442],"domain_scores_gemma":[0.99954826,0.000030246729,0.00019385549,0.00015313216,0.00005372046,0.000020806694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024524055,0.00008967658,0.00023505269,0.00009487393,0.0000306734,0.0000039707284,0.00009110782,0.0001395216,0.000100428566],"category_scores_gemma":[0.00009157119,0.00008382143,0.00008307349,0.00010499169,0.000027584218,0.00006516398,0.00007323506,0.000084639774,0.0000089206105],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058958347,0.00019018954,0.9573099,0.00001503908,0.00031898162,7.34075e-7,0.00050496176,0.0000017163745,0.018172449,0.00007462809,0.00040872575,0.022943705],"study_design_scores_gemma":[0.00091135444,0.00008224952,0.9855416,0.000008927599,0.00006881465,0.0000056943722,0.000019991057,3.188335e-7,0.0127247935,0.000026089461,0.00052780507,0.000082403814],"about_ca_topic_score_codex":0.00019345997,"about_ca_topic_score_gemma":0.000045151464,"teacher_disagreement_score":0.028231645,"about_ca_system_score_codex":0.000013663458,"about_ca_system_score_gemma":0.0000063050456,"threshold_uncertainty_score":0.34181386},"labels":[],"label_agreement":null},{"id":"W2144744378","doi":"10.4049/jimmunol.175.2.730","title":"<i>Bordetella pertussis</i> Adenylate Cyclase Toxin Modulates Innate and Adaptive Immune Responses: Distinct Roles for Acylation and Enzymatic Activity in Immunomodulation and Cell Death","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Science Foundation Ireland; Enterprise Ireland","keywords":"Adenylate Cyclase Toxin; Bordetella pertussis; Biology; Inflammasome; Chemistry; Cell biology; Microbiology; Biochemistry; Pertussis toxin; Signal transduction; Receptor","score_opus":0.012648257921893162,"score_gpt":0.24086485218654538,"score_spread":0.2282165942646522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144744378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98223656,0.015963616,0.0004627904,0.0008333388,0.0001871276,0.00027249666,0.00001963012,0.000010352352,0.000014067678],"genre_scores_gemma":[0.99700344,0.002522934,0.00025148178,0.00002068665,0.000040898572,0.000008519729,0.0000063595758,0.000015124997,0.00013058113],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985917,0.00053288834,0.00048575256,0.0001444063,0.000017213279,0.0002279967],"domain_scores_gemma":[0.9985063,0.00076844735,0.00045113885,0.00014963413,0.000108176966,0.000016291471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007824659,0.00019070476,0.00039552944,0.0002136512,0.0002574057,0.000029027755,0.000102686485,0.00020715232,0.000017185397],"category_scores_gemma":[0.00013753874,0.00013234757,0.000049123635,0.00008621824,0.0001844983,0.00032238875,0.00007488923,0.00033801043,0.0000022552147],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004345141,0.0001020737,0.0020635524,0.000015150262,0.00014166255,6.4735156e-7,0.0011768795,0.00004619937,0.9692632,0.00011901289,0.000010261207,0.022716224],"study_design_scores_gemma":[0.006223402,0.001773624,0.75329584,0.00012747844,0.00022136369,0.0007716186,0.00071551814,0.0010478264,0.23279004,0.0012563184,0.0014732871,0.00030371317],"about_ca_topic_score_codex":0.00014480235,"about_ca_topic_score_gemma":0.00013107002,"teacher_disagreement_score":0.75123227,"about_ca_system_score_codex":0.0000460807,"about_ca_system_score_gemma":0.000037022124,"threshold_uncertainty_score":0.53969777},"labels":[],"label_agreement":null},{"id":"W2144881314","doi":"10.1186/s12974-015-0372-y","title":"Adjuvant treatment with dexamethasone plus anti-C5 antibodies improves outcome of experimental pneumococcal meningitis: a randomized controlled trial","year":2015,"lang":"en","type":"article","venue":"Journal of Neuroinflammation","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw","keywords":"Dexamethasone; Medicine; Placebo; Internal medicine; Streptococcus pneumoniae; Antibody; Ceftriaxone; Meningitis; Gastroenterology; Adjunctive treatment; Corticosteroid; Immunology; Surgery; Antibiotics; Pathology; Biology; Microbiology","score_opus":0.03120553712917525,"score_gpt":0.29156236611216296,"score_spread":0.26035682898298773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144881314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99567276,0.0010824725,0.00010358761,0.00013289496,0.0015622994,0.0013025213,0.0000042795164,0.00001834244,0.00012081757],"genre_scores_gemma":[0.9993339,0.00009448068,0.0001545422,0.0000016743758,0.00017941145,0.00004203851,0.000009322729,0.000014032359,0.0001705745],"study_design_codex":"bench_or_experimental","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99787235,0.0005517667,0.0012359266,0.00012229152,0.000058715046,0.00015896696],"domain_scores_gemma":[0.9977356,0.00034612842,0.0014599552,0.00012528736,0.00029399688,0.00003902458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071198866,0.00020585247,0.0017162459,0.0002203849,0.000066790635,0.00003006638,0.00008352204,0.00010110711,0.00003966762],"category_scores_gemma":[0.00030386724,0.00011689909,0.00038011873,0.00007444903,0.000116088675,0.00027228676,0.000020165025,0.00013058132,0.000006639329],"study_design_candidate":"randomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.41868696,0.00018443234,0.000106088635,0.000003856332,0.00036079626,0.000005850749,0.00034392116,0.000028835053,0.5799721,0.000034782082,0.000011745746,0.00026065606],"study_design_scores_gemma":[0.6923047,0.0045338506,0.0003665603,0.00003027329,0.00034339481,0.00035242597,0.00023726237,0.000045336852,0.3015678,0.000014741741,0.00011409683,0.000089566034],"about_ca_topic_score_codex":0.00005461944,"about_ca_topic_score_gemma":0.0000069786033,"teacher_disagreement_score":0.27840427,"about_ca_system_score_codex":0.000074462536,"about_ca_system_score_gemma":0.00013599909,"threshold_uncertainty_score":0.4767007},"labels":[],"label_agreement":null},{"id":"W2145145142","doi":"10.1128/iai.00980-07","title":"A Carcinoembryonic Antigen-Related Cell Adhesion Molecule 1 Homologue Plays a Pivotal Role in Nontypeable <i>Haemophilus influenzae</i> Colonization of the Chinchilla Nasopharynx via the Outer Membrane Protein P5-Homologous Adhesin","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"National Institute on Deafness and Other Communication Disorders; National Institutes of Health","keywords":"Bacterial adhesin; Haemophilus influenzae; Microbiology; Biology; Pasteurellaceae; Bacterial outer membrane; Haemophilus; Antigen; Immunology; Bacteria; Virulence; Antibiotics; Escherichia coli; Gene","score_opus":0.006458858066692832,"score_gpt":0.21165509476419533,"score_spread":0.2051962366975025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145145142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641573,0.0012558908,0.000051919145,0.00009488376,0.0006343597,0.0007774544,0.000014305355,0.00005492428,0.0007005217],"genre_scores_gemma":[0.99934715,0.00014899786,0.000007677957,0.00008804605,0.000024478019,0.000027250284,0.000047241985,0.000019348094,0.00028978902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831545,0.00059447635,0.0005045042,0.00022877048,0.00003518813,0.00032163234],"domain_scores_gemma":[0.99909776,0.000106219595,0.0002786688,0.00038740825,0.000107190746,0.000022747723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006697408,0.00022605206,0.00029725092,0.00016972699,0.00059415126,0.000023123863,0.00017515081,0.0003952491,0.00014067662],"category_scores_gemma":[0.00007121407,0.00015181839,0.000111227564,0.00049646996,0.0002325254,0.0001506551,0.00017099836,0.0006589864,0.00003518327],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024362713,0.00034360046,0.06986018,0.00003044184,0.000050526673,0.000002302883,0.00064337254,0.000053115065,0.92816466,0.00011388137,0.000031737043,0.0004625749],"study_design_scores_gemma":[0.0014015485,0.00029578895,0.4796104,0.000040723786,0.000027122527,0.00020280418,0.00004984018,0.000030735904,0.51741886,0.000113372385,0.000667403,0.00014137736],"about_ca_topic_score_codex":0.008086658,"about_ca_topic_score_gemma":0.001933375,"teacher_disagreement_score":0.41074577,"about_ca_system_score_codex":0.00006127843,"about_ca_system_score_gemma":0.000061204584,"threshold_uncertainty_score":0.9985186},"labels":[],"label_agreement":null},{"id":"W2145335341","doi":"10.1097/ccm.0b013e3181ab851c","title":"Influence of innate cytokine production capacity on clinical manifestation and severity of pediatric meningococcal disease","year":2009,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Meningococcal disease; Meningitis; Shock (circulatory); Interleukin; Cytokine; Immunology; Intensive care unit; Septic shock; Internal medicine; Gastroenterology; Tumor necrosis factor alpha; Disease; Neisseria meningitidis; Sepsis; Surgery","score_opus":0.03151727666154,"score_gpt":0.33733268134099675,"score_spread":0.3058154046794568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145335341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974116,0.0004375926,0.000019511925,0.0014445119,0.000432133,0.0001352433,0.000026904228,0.000021327505,0.00007115659],"genre_scores_gemma":[0.9994955,0.000110796864,0.00002184173,0.00008217616,0.0002404749,0.0000033923734,0.000031715914,0.0000035065327,0.000010590523],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991126,0.00014781169,0.00039319374,0.00020136447,0.000028417015,0.00011660301],"domain_scores_gemma":[0.9992013,0.00019021834,0.00007408254,0.00014689917,0.0003413147,0.0000461865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024589492,0.000093672505,0.0002613825,0.000083478684,0.00005725409,0.0000015992724,0.000043579996,0.00010425333,0.00003874424],"category_scores_gemma":[0.0023049605,0.00007201748,0.000031019466,0.00012471178,0.00035917113,0.00006738665,0.000015202549,0.00018668613,0.0000030747565],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025844332,0.0011414756,0.5244887,0.001093068,0.000067395325,0.000009417881,0.0017956155,0.00003895436,0.42831725,0.018562173,0.0011631784,0.020738337],"study_design_scores_gemma":[0.0007345496,0.0016824488,0.9894615,0.00006875934,0.00014844367,0.000013131655,0.00011699253,0.0000013867854,0.006816145,0.00065985566,0.00022359699,0.000073214294],"about_ca_topic_score_codex":0.000044431545,"about_ca_topic_score_gemma":0.0000035723006,"teacher_disagreement_score":0.4649728,"about_ca_system_score_codex":0.000010900646,"about_ca_system_score_gemma":0.000023964201,"threshold_uncertainty_score":0.29367876},"labels":[],"label_agreement":null},{"id":"W2145360393","doi":"10.1128/cvi.00101-12","title":"Immune Response to Haemophilus influenzae Type b Vaccination in Patients with Chronic Renal Failure","year":2012,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; NOSM University; Lakehead University","funders":"","keywords":"Medicine; Conjugate vaccine; Vaccination; Immune system; Immunology; Haemophilus influenzae; Vaccine failure; Antibody; Pasteurellaceae; Hemodialysis; Chronic renal failure; Hib vaccine; Virology; Immunization; Internal medicine; Microbiology; Biology; Antibiotics","score_opus":0.016140327461302492,"score_gpt":0.2930174030718204,"score_spread":0.2768770756105179,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145360393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952194,0.0019774896,0.000015290954,0.0011001172,0.0011810805,0.00040569328,0.000009331526,0.00005860183,0.0000330152],"genre_scores_gemma":[0.9990436,0.0001030907,0.000060048005,0.00014405113,0.00015531438,0.000028923943,0.00007529199,0.000022984128,0.00036668847],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99786294,0.0005408442,0.000702138,0.00034308963,0.000017981405,0.00053300505],"domain_scores_gemma":[0.9989066,0.00034488743,0.00015568991,0.0003642039,0.00017064689,0.000057983332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007344194,0.00024044835,0.0005296998,0.00025470238,0.00014683222,0.00001514294,0.00016269485,0.0004112604,0.00061540824],"category_scores_gemma":[0.0004760671,0.00018158146,0.000060194485,0.00038575713,0.000055738554,0.00023674431,0.00019979922,0.0005288747,0.0004163715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017299589,0.00083689875,0.8641589,0.00001152337,0.00026017672,0.0000010055903,0.00014444799,0.0000038186317,0.08611036,0.00023708698,0.0011053948,0.029830767],"study_design_scores_gemma":[0.0072433185,0.0035594793,0.92874354,0.000033241628,0.000035942034,0.00002438251,0.000015869096,4.4073974e-7,0.0011679566,0.00002349033,0.05892824,0.00022409693],"about_ca_topic_score_codex":0.000098943725,"about_ca_topic_score_gemma":0.00012779814,"teacher_disagreement_score":0.08494241,"about_ca_system_score_codex":0.00005702311,"about_ca_system_score_gemma":0.000064993816,"threshold_uncertainty_score":0.7404677},"labels":[],"label_agreement":null},{"id":"W2145985597","doi":"10.1128/iai.00222-07","title":"Neisserial Outer Membrane Vesicles Bind the Coinhibitory Receptor Carcinoembryonic Antigen-Related Cellular Adhesion Molecule 1 and Suppress CD4 <sup>+</sup> T Lymphocyte Function","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Sanofi Pasteur; Sanofi","keywords":"Biology; Bacterial outer membrane; Bacterial adhesin; Neisseria meningitidis; Neisseria; Microbiology; Antigen; Vesicle; Membrane protein; Cell biology; Bacteria; Immunology; Biochemistry; Membrane; Gene; Escherichia coli","score_opus":0.009952049038308446,"score_gpt":0.21632585651475433,"score_spread":0.20637380747644588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145985597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946753,0.0020631019,0.00010061975,0.00008769937,0.0023194258,0.00031138206,0.000012925351,0.00012802392,0.00030153734],"genre_scores_gemma":[0.998122,0.0009358196,0.0000049257355,0.00006791984,0.0001880004,0.000011459545,0.00013781126,0.000023868739,0.0005082231],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985481,0.0004346494,0.00038083384,0.00028253783,0.000028518782,0.00032539357],"domain_scores_gemma":[0.99926054,0.00014467178,0.00014087222,0.00030357268,0.00010540513,0.00004493729],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000658193,0.00024843134,0.00025504755,0.0001652052,0.0010127658,0.00007814321,0.000076076285,0.00039747864,0.0005949484],"category_scores_gemma":[0.000051890835,0.00019084163,0.00009155624,0.00022216409,0.00023193676,0.00026442253,0.0001100215,0.00041746048,0.00011034694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052439474,0.00009739895,0.0058969855,0.000021921776,0.00012647822,7.7334033e-7,0.00047828694,0.000010385195,0.9875371,0.00011237272,0.00040338113,0.0047905254],"study_design_scores_gemma":[0.002919432,0.0005089887,0.16102096,0.000042745243,0.00010717975,0.00015263417,0.00042193936,0.000047571924,0.775635,0.000046552774,0.05878619,0.00031079882],"about_ca_topic_score_codex":0.0021617773,"about_ca_topic_score_gemma":0.00009077056,"teacher_disagreement_score":0.2119021,"about_ca_system_score_codex":0.000052900436,"about_ca_system_score_gemma":0.000039995964,"threshold_uncertainty_score":0.7789478},"labels":[],"label_agreement":null},{"id":"W2146477509","doi":"10.1345/aph.1h647","title":"Acetaminophen and Ibuprofen for Prevention of Adverse Reactions Associated with Childhood Immunization","year":2007,"lang":"en","type":"review","venue":"Annals of Pharmacotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Tetanus; Diphtheria; Acetaminophen; Adverse effect; Ibuprofen; Pertussis vaccine; Vaccination; Whooping cough; Antipyretic; Anesthesia; Pediatrics; Immunization; Internal medicine; Immunology; Pharmacology; Analgesic","score_opus":0.11382738792131201,"score_gpt":0.4185073638557933,"score_spread":0.30467997593448126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146477509","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010040456,0.98799527,0.00014581138,0.000018268347,0.00029388632,0.0011881278,0.00020565919,0.000029165149,0.00008338269],"genre_scores_gemma":[0.002839436,0.99518883,0.000046061585,0.000015824107,0.000040254858,0.000072858755,0.0009008868,0.00003559725,0.00086023577],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989214,0.00018099738,0.0005390275,0.00017682703,0.000015843827,0.000165928],"domain_scores_gemma":[0.998532,0.00019369443,0.00087036006,0.00014877183,0.00024178313,0.000013413699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003415426,0.00021199016,0.000812472,0.0002175923,0.00009003146,0.000002622395,0.00009574932,0.0003008305,0.00015901978],"category_scores_gemma":[0.00003035659,0.00016443993,0.00023523388,0.00022762798,0.000071386545,0.00009886321,0.000014437307,0.00015749564,0.0000026063574],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015193204,0.0006044034,0.00003145016,0.0013647567,0.0029590542,7.8286384e-8,0.00015149004,6.046898e-7,0.033720095,0.00012087526,0.00072646845,0.9601688],"study_design_scores_gemma":[0.0018191679,0.00066407793,0.0004617949,0.0035204233,0.0007979157,0.000013785659,0.000023078816,2.7123173e-7,0.027545799,0.00004587747,0.9648833,0.00022446735],"about_ca_topic_score_codex":0.000030870535,"about_ca_topic_score_gemma":0.0000070137385,"teacher_disagreement_score":0.96415687,"about_ca_system_score_codex":0.000009839204,"about_ca_system_score_gemma":0.00007598965,"threshold_uncertainty_score":0.67056656},"labels":[],"label_agreement":null},{"id":"W2146674815","doi":"10.1016/j.vaccine.2013.05.008","title":"Novel vaccine formulations against pertussis offer earlier onset of immunity and provide protection in the presence of maternal antibodies","year":2013,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Dalhousie University; Izaak Walton Killam Health Centre; University of Alberta; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Krembil Foundation; Bill and Melinda Gates Foundation","keywords":"Whooping cough; Immunology; Medicine; Immunity; Vaccination; Pertussis vaccine; Adjuvant; Bordetella pertussis; Immunization; Pertussis toxin; Virology; CpG Oligodeoxynucleotide; Antibody; Immune system; Biology; Internal medicine","score_opus":0.01750728844203891,"score_gpt":0.24166799508206221,"score_spread":0.2241607066400233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146674815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820185,0.00022941222,0.00016048191,0.0005732201,0.00013003379,0.0006008724,0.00002967321,0.000013359748,0.00006108995],"genre_scores_gemma":[0.9994627,0.000100488156,0.00012154663,0.000021139103,0.000016874337,0.00004481357,0.000024468545,0.000006822966,0.00020112735],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992849,0.00010258225,0.0003346739,0.00011848372,0.000016877815,0.0001424306],"domain_scores_gemma":[0.99939144,0.000099834964,0.00015074972,0.00022579174,0.00012418946,0.00000800098],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001963706,0.00010968058,0.00022059286,0.00013841214,0.00010840631,0.000013548405,0.00011561691,0.00009947076,0.00021652372],"category_scores_gemma":[0.000102396545,0.000067887864,0.000038661165,0.00017144892,0.000018259054,0.00020725513,0.00006820634,0.00015502454,0.000009536279],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010423576,0.00017775815,0.14622517,0.000047567413,0.00004947454,7.855158e-8,0.0004249457,0.0000072990288,0.847986,0.00008249698,0.0002185767,0.004676393],"study_design_scores_gemma":[0.0010666901,0.00015580589,0.92328984,0.000057114707,0.000018922628,0.000040652758,0.00014225022,0.00006682458,0.07429792,0.000105388855,0.0006908015,0.0000677616],"about_ca_topic_score_codex":0.0056699193,"about_ca_topic_score_gemma":0.0004297209,"teacher_disagreement_score":0.7770647,"about_ca_system_score_codex":0.00000787604,"about_ca_system_score_gemma":0.000016124239,"threshold_uncertainty_score":0.85712594},"labels":[],"label_agreement":null},{"id":"W2146989535","doi":"10.1086/605671","title":"Invasive<i>Haemophilus influenzae</i>Disease Caused by Non–Type b Strains in Northwestern Ontario, Canada, 2002–2008","year":2009,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; NOSM University; Lakehead University; University of Toronto","funders":"","keywords":"Haemophilus influenzae; Medicine; Serotype; Incidence (geometry); Pasteurellaceae; Disease; Microbiology; Virology; Internal medicine; Biology; Antibiotics","score_opus":0.02202504992342811,"score_gpt":0.28457055689851424,"score_spread":0.2625455069750861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146989535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99477464,0.0011305029,0.0000038688777,0.00030859341,0.0023369812,0.00044736537,0.00036672506,0.00013251694,0.0004987786],"genre_scores_gemma":[0.9948616,0.00022582347,7.553294e-7,0.0026969218,0.00018107181,0.000028229855,0.0005217477,0.000025195524,0.0014586628],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975394,0.00025888273,0.00093027705,0.000616992,0.000048288348,0.0006061299],"domain_scores_gemma":[0.9984695,0.0003178573,0.00023153193,0.00051160087,0.00017327494,0.00029628325],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013966704,0.0003838568,0.0006545511,0.00012510868,0.0002510868,0.0000519705,0.0002374245,0.00031287328,0.0019816144],"category_scores_gemma":[0.00035014414,0.00036809684,0.00021907565,0.00033239674,0.00017056496,0.00021096901,0.00006623638,0.0005868703,0.00023978484],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016100041,0.0014696617,0.91577923,0.000014458031,0.00013124365,0.00005535191,0.000061102524,0.000043735887,0.002065135,0.000021346596,0.07879993,0.0013978124],"study_design_scores_gemma":[0.0028817644,0.0005868407,0.958488,0.000053720254,0.00013402099,0.000008475007,0.000020257916,0.0000014496698,0.000120580844,0.0001436575,0.037138574,0.00042268375],"about_ca_topic_score_codex":0.63226175,"about_ca_topic_score_gemma":0.9752217,"teacher_disagreement_score":0.34295988,"about_ca_system_score_codex":0.00029949108,"about_ca_system_score_gemma":0.0023090704,"threshold_uncertainty_score":0.9998771},"labels":[],"label_agreement":null},{"id":"W2147685256","doi":"10.1128/jcm.42.6.2718-2723.2004","title":"DNA Sequence Analysis of the PorB Protein of Nonserotypeable Serogroup C ET-15 Meningococci Suggests a Potential Mutational Hot Spot on Their Serotype Antigens","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Health Canada","keywords":"Biology; Serotype; Neisseria meningitidis; Virology; Microbiology; Epitope; Nucleic acid sequence; Point mutation; Sequence analysis; Gene; Antigen; Nonsynonymous substitution; Meningococcal disease; Mutation; Genetics; Bacteria; Genome","score_opus":0.04272486708929401,"score_gpt":0.3395153810703919,"score_spread":0.2967905139810979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147685256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970629,0.00016279341,0.00016018575,0.00093206053,0.0011823949,0.00026228905,0.00017266323,0.000008704857,0.000055957767],"genre_scores_gemma":[0.999145,0.000056832676,0.00031216908,0.00020738879,0.00009231083,0.0000037858765,0.000055461467,0.000012702156,0.000114385795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969534,0.00078611745,0.0017260165,0.0002433854,0.00002806941,0.00026298474],"domain_scores_gemma":[0.99679816,0.0004047034,0.0018947986,0.00031979047,0.0005458997,0.000036625497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014239412,0.00020612599,0.0010628003,0.00028796276,0.000105316765,0.000008701298,0.0004158537,0.000466931,0.00041550185],"category_scores_gemma":[0.0004553235,0.00012637589,0.0008617572,0.0005474911,0.00044358108,0.00008542948,0.00009978293,0.00067098247,0.000019694735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013989328,0.000643764,0.009883745,0.000011783981,0.002131841,0.0000041383287,0.00009523332,0.0008678049,0.9837782,0.0007656318,0.000109713554,0.00030923626],"study_design_scores_gemma":[0.0049495385,0.0035085045,0.35266396,0.00025634695,0.0011099007,0.0007850651,0.00011480243,0.000006218879,0.63172257,0.00083385495,0.0037634973,0.00028572386],"about_ca_topic_score_codex":0.000118335796,"about_ca_topic_score_gemma":0.00015848843,"teacher_disagreement_score":0.3520556,"about_ca_system_score_codex":0.0000312013,"about_ca_system_score_gemma":0.0004084936,"threshold_uncertainty_score":0.51534593},"labels":[],"label_agreement":null},{"id":"W2148160345","doi":"10.1086/432102","title":"Protective Antibody Responses Elicited by a Meningococcal Outer Membrane Vesicle Vaccine with Overexpressed Genome‐Derived Neisserial Antigen 1870","year":2005,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Ministry of Earth Sciences; Ministry of Education, India; University of Saskatchewan","keywords":"Neisseria meningitidis; Microbiology; Bacterial outer membrane; Virology; Biology; Antigen; Meningococcal vaccine; Recombinant DNA; Antibody; Meningococcal disease; Immunization; Escherichia coli; Bacteria; Gene; Immunology; Genetics","score_opus":0.005984401197764323,"score_gpt":0.2416491188889055,"score_spread":0.23566471769114117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148160345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965102,0.0015125601,0.0005992873,0.00038139801,0.0003235578,0.00044842428,0.000092796596,0.000078731704,0.000053009608],"genre_scores_gemma":[0.9989924,0.00024844005,0.000015144618,0.00013803082,0.00041987427,0.000016622998,0.000032613076,0.000033903892,0.00010299375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839014,0.0005588067,0.00048725467,0.00017449142,0.00005096266,0.00033835016],"domain_scores_gemma":[0.9985792,0.00024979535,0.0005238721,0.00026471695,0.00031491343,0.000067498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002814662,0.00027595423,0.00045767604,0.00018452648,0.0004227552,0.00006446264,0.00024022888,0.00012781328,0.00059408625],"category_scores_gemma":[0.00015049444,0.00016411603,0.00014782905,0.0002582147,0.00010708026,0.00037046982,0.000059610134,0.0003390634,0.00004068166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008250326,0.00055439095,0.009586487,0.00001145857,0.00067994924,0.0000042267693,0.00045494776,0.00012842106,0.9791304,0.000007981993,0.00077004125,0.00042136808],"study_design_scores_gemma":[0.013470615,0.0040981984,0.26934743,0.0001460847,0.0007223206,0.0020349275,0.00054265367,0.000009759101,0.6937792,0.000057437886,0.015224683,0.00056671596],"about_ca_topic_score_codex":0.00018151347,"about_ca_topic_score_gemma":0.000047068537,"teacher_disagreement_score":0.28535125,"about_ca_system_score_codex":0.00007029513,"about_ca_system_score_gemma":0.000122012985,"threshold_uncertainty_score":0.6692458},"labels":[],"label_agreement":null},{"id":"W2148190729","doi":"10.1002/14651858.cd004496.pub3","title":"Intraventricular antibiotics for bacterial meningitis in neonates","year":2012,"lang":"en","type":"review","venue":"Cochrane Database of Systematic Reviews","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Antibiotics; Meningitis; Bacterial meningitis; Medicine; Neonatal meningitis; Microbiology; Intensive care medicine; Pediatrics; Biology; Escherichia coli","score_opus":0.09681922765987828,"score_gpt":0.35596732552241606,"score_spread":0.2591480978625378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148190729","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000027963486,0.9874475,0.00016300654,0.0000035383578,0.002656605,0.008166408,0.001491983,0.000019195833,0.000023777751],"genre_scores_gemma":[0.000026044021,0.9919843,0.0002865966,0.000002097829,0.00020367999,0.00036613317,0.0069442033,0.000048780785,0.00013814567],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9944493,0.0013647301,0.0033370503,0.00039334546,0.000027719141,0.0004278579],"domain_scores_gemma":[0.9957649,0.0009995395,0.00210716,0.0009766902,0.000115733616,0.000035967372],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026494863,0.0005778938,0.006936647,0.00034532914,0.00006647799,0.000026751059,0.00043600154,0.00047397253,0.00061123533],"category_scores_gemma":[0.0011561086,0.0003768203,0.0008748618,0.00035238126,0.000060973296,0.00014490697,0.0001245943,0.00024794383,0.00041181984],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008560733,0.00012806797,9.930175e-7,0.96070623,0.00026575604,0.0000010961766,0.000028380142,1.6243968e-8,0.0007767826,0.00031142565,0.0008291674,0.03694353],"study_design_scores_gemma":[0.00034719676,0.00003874445,2.7980786e-7,0.4397538,0.0021810087,0.00018923703,0.00000746129,2.0164465e-7,0.000104097395,0.0000013698333,0.55714613,0.00023047344],"about_ca_topic_score_codex":0.000043950673,"about_ca_topic_score_gemma":0.000013559733,"teacher_disagreement_score":0.556317,"about_ca_system_score_codex":0.00006244204,"about_ca_system_score_gemma":0.000085205334,"threshold_uncertainty_score":0.9998684},"labels":[],"label_agreement":null},{"id":"W2148335527","doi":"10.1128/jb.01463-13","title":"Influence of O Polysaccharides on Biofilm Development and Outer Membrane Vesicle Biogenesis in Pseudomonas aeruginosa PAO1","year":2014,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada; University of Guelph","keywords":"Biofilm; Pseudomonas aeruginosa; Biology; Bacterial outer membrane; Microbiology; Biogenesis; Polysaccharide; Mutant; Extracellular vesicle; Vesicle; Extracellular matrix; Cell biology; Bacteria; Gene; Biochemistry; Escherichia coli; Microvesicles; Membrane; Genetics","score_opus":0.011435339758015249,"score_gpt":0.23025211681112828,"score_spread":0.21881677705311303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148335527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990302,0.00019857346,0.000016787646,0.00025076192,0.0004072925,0.00005561194,0.000005374503,0.0000059257673,0.000029502466],"genre_scores_gemma":[0.99941087,0.00012305946,0.00026612292,0.00011100367,0.000047299454,0.00000262393,0.0000037845468,0.0000074139434,0.000027850529],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988386,0.00020006049,0.000620024,0.00013491328,0.000015019064,0.00019136057],"domain_scores_gemma":[0.99920803,0.00017572346,0.00037943583,0.00011808185,0.00009279849,0.000025912525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041568614,0.0001351591,0.00044829916,0.0003119689,0.000048961167,0.0000071765403,0.0001245683,0.0001918036,0.00007765054],"category_scores_gemma":[0.00009934656,0.00010176176,0.000054840188,0.00010032555,0.000110154135,0.00009884833,0.00004740047,0.00016924516,0.000016533393],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003165374,0.000094549556,0.048323646,0.000015565685,0.00007574695,0.0000025711176,0.0002029648,0.000029749996,0.9441912,0.00015443441,0.000026908278,0.0065660835],"study_design_scores_gemma":[0.00095527334,0.00049674517,0.45307997,0.000056791316,0.000014896544,0.00028464475,0.00002659319,8.4698166e-7,0.5389027,0.000033055192,0.006058444,0.00009006916],"about_ca_topic_score_codex":0.00009571742,"about_ca_topic_score_gemma":0.00003475304,"teacher_disagreement_score":0.40528855,"about_ca_system_score_codex":0.00002137517,"about_ca_system_score_gemma":0.00005162983,"threshold_uncertainty_score":0.41497242},"labels":[],"label_agreement":null},{"id":"W2148846257","doi":"10.1093/rheumatology/ket398","title":"Childhood inflammatory brain diseases: pathogenesis, diagnosis and therapy","year":2013,"lang":"en","type":"review","venue":"Lara D. Veeken","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences","funders":"","keywords":"Medicine; Disease; Pathogenesis; Presentation (obstetrics); Intensive care medicine; Pediatrics; Pathology; Surgery","score_opus":0.0199159720546224,"score_gpt":0.27036629773851056,"score_spread":0.25045032568388814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148846257","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006393743,0.9909812,9.274583e-7,0.0000653202,0.00096394407,0.0010500251,0.00036175697,0.00012344218,0.000059647173],"genre_scores_gemma":[0.00006212667,0.9970731,0.00000803789,0.00009586461,0.00030152375,0.0011080068,0.0007190968,0.00006577756,0.00056644075],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99832404,0.00041561338,0.000451075,0.000459875,0.000015452717,0.0003339349],"domain_scores_gemma":[0.9989052,0.0002957182,0.0002444832,0.00046444798,0.000039590235,0.00005057278],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011263083,0.00046756986,0.0012008117,0.00015403955,0.00021575109,0.00007405048,0.00023067408,0.0006707087,0.0012863922],"category_scores_gemma":[0.00006109653,0.000342064,0.00035391087,0.00013394252,0.000084483516,0.00011652148,0.00013607404,0.0003056134,0.000763741],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004058776,0.0001451588,0.00051374914,0.0007555081,0.00047648425,0.0000018589151,0.000035314984,8.699132e-9,0.00010420263,0.000074703195,0.008685834,0.9892031],"study_design_scores_gemma":[0.0004836288,0.00008765137,0.0040066764,0.0010419281,0.00032601564,0.0000746283,0.000006339637,1.112458e-8,0.000013021414,0.00003223799,0.9935387,0.00038917537],"about_ca_topic_score_codex":0.000057896905,"about_ca_topic_score_gemma":0.000006717298,"teacher_disagreement_score":0.98881394,"about_ca_system_score_codex":0.000022901364,"about_ca_system_score_gemma":0.00010706538,"threshold_uncertainty_score":0.99990314},"labels":[],"label_agreement":null},{"id":"W2149027553","doi":"10.1086/340280","title":"The Changing Age and Seasonal Profile of Pertussis in Canada","year":2002,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":233,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre; Health Canada; Institute of Population and Public Health; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Outbreak; Incidence (geometry); Immunization; Population; Herd immunity; Medicine; Pediatrics; Pertussis vaccine; Demography; Immunology; Environmental health; Virology; Immune system","score_opus":0.007382777730449727,"score_gpt":0.19969403464556282,"score_spread":0.19231125691511308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149027553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916982,0.0073555564,0.00000277873,0.00029167705,0.0004153747,0.000055262142,0.000014709677,0.0000031615145,0.00016325619],"genre_scores_gemma":[0.9986198,0.0011372244,5.7998534e-7,0.000035470803,0.00004800057,0.0000021416286,8.0356506e-7,0.0000041174862,0.00015184257],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994647,0.00014806309,0.00019847148,0.00003486451,0.000018590852,0.00013529806],"domain_scores_gemma":[0.99940056,0.0002883863,0.00016492068,0.000072747906,0.000056825273,0.000016570017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014801169,0.00006292995,0.00013593415,0.00005718727,0.00019910993,0.000009515939,0.00007767466,0.000022692115,0.0002562897],"category_scores_gemma":[0.00009942108,0.00003156526,0.000039751623,0.00011869254,0.00006861807,0.000050060273,0.000028731882,0.00012056477,0.000002037796],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005030641,0.00047133642,0.86275375,0.00007115344,0.0007341618,0.000030692452,0.0024653967,0.00011440014,0.052516922,0.00041818773,0.019631702,0.06028925],"study_design_scores_gemma":[0.0022929336,0.0004261695,0.97613966,0.00014495368,0.00025248804,0.0011042637,0.002504531,0.00007024652,0.0038051056,0.00024091729,0.012829658,0.00018906673],"about_ca_topic_score_codex":0.047531184,"about_ca_topic_score_gemma":0.12672539,"teacher_disagreement_score":0.11338593,"about_ca_system_score_codex":0.00005350849,"about_ca_system_score_gemma":0.00009307084,"threshold_uncertainty_score":0.9588114},"labels":[],"label_agreement":null},{"id":"W2149044824","doi":"10.1128/cdli.11.4.752-757.2004","title":"Use of Bispecific Antibodies in Molecular Velcro Assays Whose Specificity Approaches the Theoretical Limit of Immunodetection for <i>Bordetella pertussis</i>","year":2004,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Bordetella pertussis; Horseradish peroxidase; Detection limit; Bacteria; Molecular biology; Bioconjugation; Monoclonal antibody; Chemistry; Primer (cosmetics); Biology; Antibody; Biochemistry; Chromatography; Enzyme; Genetics","score_opus":0.0711069128719599,"score_gpt":0.2963360843262508,"score_spread":0.2252291714542909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149044824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99264514,0.003509262,0.0011457164,0.0012394113,0.00088973605,0.00044877635,0.000037916325,0.00002429154,0.000059767743],"genre_scores_gemma":[0.9968893,0.0025927362,0.00030483195,0.000042364725,0.00005053406,0.00002282125,0.00003088457,0.000018890698,0.000047663456],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978572,0.00037761094,0.0010609218,0.00037672147,0.000018319794,0.00030920363],"domain_scores_gemma":[0.99789244,0.0012174712,0.00029360715,0.0004375698,0.00014294742,0.000015958307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071037526,0.00022438867,0.0007393654,0.0001397855,0.00013406057,0.00001595233,0.00021322802,0.00044980287,0.00006623056],"category_scores_gemma":[0.00067663495,0.00014832112,0.0002558772,0.00021211129,0.00088064186,0.00008990205,0.00016381599,0.0004511622,0.000006585507],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035362954,0.0013789216,0.021522997,0.000062927065,0.00060385413,0.0000014384163,0.00035325802,0.000044457174,0.8585907,0.08313624,0.00009817069,0.030670749],"study_design_scores_gemma":[0.009466934,0.003545787,0.48204908,0.00016413303,0.0002795289,0.0001503498,0.00092401664,0.00004653812,0.47438905,0.014428131,0.0140379295,0.00051852566],"about_ca_topic_score_codex":0.00018330972,"about_ca_topic_score_gemma":0.000058263493,"teacher_disagreement_score":0.46052608,"about_ca_system_score_codex":0.000013588773,"about_ca_system_score_gemma":0.00004619924,"threshold_uncertainty_score":0.604836},"labels":[],"label_agreement":null},{"id":"W2149089418","doi":"","title":"Protecting infants from pertussis.","year":2014,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Medicine; Pediatrics; Vaccination; Whooping cough; Pertussis vaccine; Bordetella pertussis; Encephalopathy; Disease; Pregnancy; Immunology; Immunization; Psychiatry; Internal medicine","score_opus":0.01612708753112694,"score_gpt":0.20252719088664345,"score_spread":0.18640010335551652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149089418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933822,0.00014548938,0.00011679933,0.00025640987,0.00134927,0.00025959,0.0000072861935,0.00010719001,0.004375721],"genre_scores_gemma":[0.9979322,0.000004514502,0.00002368468,0.00008834622,0.00016884,0.0005490528,0.000020604455,0.0000077432205,0.0012050109],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9994051,0.00011534855,0.000114350754,0.00014392394,0.00000502549,0.00021629043],"domain_scores_gemma":[0.99968475,0.000089244764,0.00004530145,0.00014642302,0.000019928437,0.000014336536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019925814,0.00007141649,0.00011431722,0.00003576677,0.00015714158,0.00001837654,0.00007059977,0.000107769585,0.000349197],"category_scores_gemma":[0.00026957836,0.0000565206,0.000035573,0.000053868105,0.000021113372,0.00006029063,0.000036789614,0.00013779054,0.00023778023],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065854576,0.000062513536,0.02439506,0.0000043163045,0.00010825231,1.2630916e-7,0.00012463589,6.2158296e-7,0.11449954,0.0002697344,0.0022957616,0.8581736],"study_design_scores_gemma":[0.0005334736,0.000012980709,0.69626004,0.0000031455552,0.000013256633,0.0000059970967,0.000015071627,0.0000016230853,0.035765782,0.00023389184,0.2670581,0.00009660607],"about_ca_topic_score_codex":0.00048764178,"about_ca_topic_score_gemma":0.00004668975,"teacher_disagreement_score":0.858077,"about_ca_system_score_codex":0.000009492628,"about_ca_system_score_gemma":0.0000037710388,"threshold_uncertainty_score":0.38234624},"labels":[],"label_agreement":null},{"id":"W2149775793","doi":"10.1099/mic.0.26912-0","title":"Three genes, lgtF, lic2C and lpsA, have a primary role in determining the pattern of oligosaccharide extension from the inner core of Haemophilus influenzae LPS","year":2004,"lang":"en","type":"article","venue":"Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Heptose; Haemophilus influenzae; Gene; Galactose; Lipopolysaccharide; Biology; Microbiology; Virulence; Oligosaccharide; Bacteria; Genetics; Biochemistry; Mutant; Immunology","score_opus":0.019189877207542127,"score_gpt":0.23083446449250417,"score_spread":0.21164458728496205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149775793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99443185,0.004334803,0.00005071525,0.0002812853,0.0003985482,0.0002730116,0.00019911658,0.000013443656,0.000017237762],"genre_scores_gemma":[0.9990726,0.00013227334,0.00004270533,0.00046370664,0.0000432278,0.000016662612,0.00020250786,0.00001438897,0.000011924084],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988749,0.00011665649,0.00046045455,0.0002835461,0.0000075791,0.00025688583],"domain_scores_gemma":[0.999032,0.0002529561,0.00023865275,0.00038255122,0.00008478337,0.000009058254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002028216,0.00018936048,0.0004146555,0.00007681838,0.00012474123,0.00000712209,0.0002527817,0.00031895444,0.00007502885],"category_scores_gemma":[0.000042561463,0.000112141584,0.00007244451,0.00009514023,0.00038167127,0.00004829587,0.00027453396,0.00026631274,0.000018041846],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087076354,0.00007132071,0.1369224,0.000007613586,0.000066866465,7.829143e-7,0.00061650184,0.000008692695,0.85288197,0.000024163772,0.0001228605,0.009189728],"study_design_scores_gemma":[0.0025529277,0.00024041986,0.7503194,0.000100654936,0.000060776387,0.00014335514,0.00021094228,0.0000018350278,0.24109992,0.00050210074,0.004589359,0.00017826751],"about_ca_topic_score_codex":0.006923823,"about_ca_topic_score_gemma":0.00490448,"teacher_disagreement_score":0.61339706,"about_ca_system_score_codex":0.000026419057,"about_ca_system_score_gemma":0.00005380901,"threshold_uncertainty_score":0.99968916},"labels":[],"label_agreement":null},{"id":"W2149926345","doi":"10.4049/jimmunol.177.11.7980","title":"TLR4 Mediates Vaccine-Induced Protective Cellular Immunity to <i>Bordetella pertussis</i> : Role of IL-17-Producing T Cells","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":351,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Bordetella pertussis; TLR4; Pertussis vaccine; Immunology; Immunity; Immune system; Innate immune system; Biology; Microbiology; Population; Immunization; Medicine","score_opus":0.007555872983726768,"score_gpt":0.2139158301749783,"score_spread":0.20635995719125155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149926345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992034,0.0049384777,0.00011891428,0.0006845753,0.001533211,0.00034772954,0.00001641795,0.000024136754,0.00030253368],"genre_scores_gemma":[0.9991037,0.00019993533,0.00007466076,0.00004637957,0.00022738219,0.000008527115,0.0000070269175,0.000026345198,0.00030600422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99766785,0.00080359494,0.00090375467,0.00017223448,0.00003959204,0.00041298824],"domain_scores_gemma":[0.9977403,0.00038150724,0.0008006885,0.0005180664,0.0005363487,0.000023085935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010810707,0.00026053158,0.00065266516,0.00030548166,0.00030617326,0.000013221646,0.00060274516,0.0002954655,0.00037514875],"category_scores_gemma":[0.00017851609,0.00017072949,0.00019838932,0.00035630297,0.00010423625,0.0001265145,0.00019766096,0.0007824285,0.00008100603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090722303,0.00024664737,0.00025831192,0.000008150133,0.0003711158,0.0000014046994,0.001107924,0.000074810654,0.99362,0.0000643144,0.00084366853,0.0024964325],"study_design_scores_gemma":[0.0011335936,0.0012919701,0.011178581,0.000047686262,0.00015049367,0.00029454762,0.0011287665,0.0000011636735,0.97403723,0.0005579347,0.010004677,0.00017334151],"about_ca_topic_score_codex":0.0021247568,"about_ca_topic_score_gemma":0.00014865254,"teacher_disagreement_score":0.019582752,"about_ca_system_score_codex":0.000062447696,"about_ca_system_score_gemma":0.00011630565,"threshold_uncertainty_score":0.6962146},"labels":[],"label_agreement":null},{"id":"W2149980799","doi":"10.1111/j.1462-5822.2009.01404.x","title":"Bacterial membrane vesicles deliver peptidoglycan to NOD1 in epithelial cells","year":2009,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":444,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Peptidoglycan; NOD1; Biology; Bacterial outer membrane; Microbiology; Innate immune system; Cell biology; Secretion; Immune system; Bacteria; Immunology; NOD2; Biochemistry; Escherichia coli","score_opus":0.008490995904036045,"score_gpt":0.2094950921641553,"score_spread":0.20100409626011925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149980799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950968,0.000244444,0.000102468075,0.00057430885,0.0030326268,0.00035882456,0.00013595744,0.00008564968,0.00036894038],"genre_scores_gemma":[0.9973735,0.000032392458,0.00017543888,0.00040924383,0.00029154323,0.000013198183,0.00039503485,0.000021651584,0.0012879963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981019,0.00026668442,0.00046140637,0.00051989144,0.000007610501,0.0006424985],"domain_scores_gemma":[0.99938256,0.000057269728,0.000093150025,0.00035622905,0.0000617996,0.00004898389],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021597609,0.0003015432,0.0004831856,0.00028038718,0.00013322265,0.000024359366,0.00030319113,0.0004760244,0.0029194122],"category_scores_gemma":[0.000022832366,0.00027897255,0.00012843793,0.00020297317,0.00009926271,0.00007691532,0.00008936317,0.0002852754,0.0033949085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029055867,0.00015604268,0.000096319076,0.000005161329,0.000033805605,0.000008185829,0.00021810769,0.000009880847,0.99301535,0.00019149593,0.0023423687,0.0036327217],"study_design_scores_gemma":[0.001347533,0.00037987038,0.0016247887,0.000012099085,0.000017959652,0.00005655535,0.00003101377,4.497134e-7,0.8006171,0.000038718757,0.19560374,0.00027018736],"about_ca_topic_score_codex":0.00022543466,"about_ca_topic_score_gemma":0.00017866892,"teacher_disagreement_score":0.19326138,"about_ca_system_score_codex":0.00006428733,"about_ca_system_score_gemma":0.00004317721,"threshold_uncertainty_score":0.99996626},"labels":[],"label_agreement":null},{"id":"W2150081030","doi":"10.1517/14712598.2015.983897","title":"The capsular group B meningococcal vaccine, 4CMenB: clinical experience and potential efficacy","year":2014,"lang":"en","type":"article","venue":"Expert Opinion on Biological Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Medical Research Council; Sparks; Action Medical Research","keywords":"Reactogenicity; Medicine; Meningococcal disease; Immunogenicity; Context (archaeology); Group B; Meningococcal vaccine; Clinical trial; European union; Meningitis; Group A; Pediatrics; Neisseria meningitidis; Intensive care medicine; Immunology; Immunization; Internal medicine; Antigen","score_opus":0.052579186302081936,"score_gpt":0.34492859288552663,"score_spread":0.2923494065834447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150081030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98643345,0.0061869184,0.0005023118,0.0013050481,0.0049697617,0.00029741338,0.0000030458752,0.0001334554,0.00016859942],"genre_scores_gemma":[0.9404271,0.057867263,0.000054967546,0.0008009809,0.0006785694,0.00007448258,0.00003816884,0.000012156401,0.000046258116],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977961,0.0009258466,0.000427939,0.00047281993,0.00002354651,0.0003537541],"domain_scores_gemma":[0.9987964,0.00066327164,0.00011341642,0.0003356386,0.000038533035,0.000052729894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070579775,0.00023514836,0.00031697936,0.00003125094,0.0006873063,0.00005974477,0.0002634572,0.00038837155,0.00035490238],"category_scores_gemma":[0.00021589074,0.00011956965,0.00014820088,0.000080724676,0.00026904637,0.000050581337,0.00008814679,0.00031132193,0.00010260371],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021929622,0.0006607568,0.0047893752,4.0284945e-7,0.00013864377,5.4328086e-7,0.0002785395,0.0000010880754,0.54607683,0.011713296,0.005695103,0.42845243],"study_design_scores_gemma":[0.0024994025,0.0019003096,0.079930596,0.0000079967285,3.0591815e-7,0.000025063751,0.00006876763,0.00001214885,0.004658677,0.00018265306,0.9105218,0.00019229627],"about_ca_topic_score_codex":0.000027569644,"about_ca_topic_score_gemma":7.581422e-7,"teacher_disagreement_score":0.9048267,"about_ca_system_score_codex":0.000009936858,"about_ca_system_score_gemma":0.0000066017096,"threshold_uncertainty_score":0.52862734},"labels":[],"label_agreement":null},{"id":"W2150135179","doi":"10.1093/pch/5.3.155","title":"Haemophilus influenzae type b disease control using Pentacel","year":2000,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Microbiology; Haemophilus; Medicine; Virology; Biology; Bacteria; Antibiotics; Genetics","score_opus":0.01637076104374449,"score_gpt":0.27523934525657173,"score_spread":0.2588685842128272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150135179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9767491,0.017292896,0.00005057084,0.0024448775,0.0019437571,0.0004336047,0.00014663776,0.00013658793,0.00080194307],"genre_scores_gemma":[0.994683,0.0021428494,0.000043990014,0.0020366039,0.00056502694,0.000006875916,0.000113775466,0.000024841302,0.0003829825],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986946,0.00018135944,0.00035853023,0.00027648796,0.000022739421,0.00046627267],"domain_scores_gemma":[0.9993573,0.00005919711,0.00012330162,0.00027745092,0.00006384856,0.0001188944],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022021573,0.00017891767,0.0002954212,0.00012264223,0.0005938224,0.000024690988,0.00012363851,0.00013124471,0.002485616],"category_scores_gemma":[0.000047764952,0.00016341914,0.00009421177,0.00031459233,0.00003959474,0.0001012648,0.00002492178,0.00029941063,0.00093453005],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005319306,0.0032706226,0.7389727,0.00059736404,0.0008478637,0.000028035685,0.0014827761,0.002431442,0.009892873,0.0061337813,0.0939233,0.13709989],"study_design_scores_gemma":[0.005673342,0.00042149768,0.3827323,0.000051515362,0.00018405965,0.00011176059,0.00003504265,0.00010249343,0.000077872224,0.00030832723,0.6097379,0.00056389975],"about_ca_topic_score_codex":0.0006832306,"about_ca_topic_score_gemma":0.000030304445,"teacher_disagreement_score":0.5158146,"about_ca_system_score_codex":0.00008420104,"about_ca_system_score_gemma":0.00024630333,"threshold_uncertainty_score":0.99984336},"labels":[],"label_agreement":null},{"id":"W2150189009","doi":"10.1128/jcm.41.1.273-278.2003","title":"Nonencapsulated <i>Neisseria meningitidis</i> Strain Produces Amylopectin from Sucrose: Altering the Concept for Differentiation between <i>N. meningitidis</i> and <i>N. polysaccharea</i>","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"U.S. Food and Drug Administration","keywords":"Neisseria meningitidis; Microbiology; Biology; Amylopectin; Strain (injury); Genetics; Bacteria; Biochemistry; Starch; Amylose","score_opus":0.03799018965597934,"score_gpt":0.3215849596091608,"score_spread":0.28359476995318145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150189009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916019,0.0023791837,0.0009074,0.0008318223,0.0032899415,0.00038299468,0.0005440389,0.000027987016,0.00003472586],"genre_scores_gemma":[0.99823815,0.00020753434,0.00038809635,0.00016108748,0.0006017403,0.000011947516,0.00023111423,0.000028705028,0.00013163537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99654365,0.00091022794,0.0017289888,0.00039052282,0.000014373855,0.00041224746],"domain_scores_gemma":[0.996225,0.0019283037,0.0012554913,0.0002466981,0.00028120112,0.00006330309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015243714,0.00028829486,0.0009796432,0.00008205804,0.00034350535,0.00006831527,0.0002770314,0.0004603169,0.00024932934],"category_scores_gemma":[0.0009317512,0.0001895174,0.00032150996,0.00012346983,0.00032720724,0.00017654544,0.0000684524,0.00062569475,0.000012618569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028078665,0.00011909515,0.014550557,0.000007238608,0.0006256162,7.181909e-7,0.00023285428,0.0000023006394,0.9791649,0.00027455113,0.0016470905,0.0030943002],"study_design_scores_gemma":[0.009760082,0.0022675605,0.055753004,0.00016289185,0.00084322004,0.0007005697,0.00055132364,0.000001943668,0.72700596,0.0017491846,0.20055681,0.00064743357],"about_ca_topic_score_codex":0.000047304744,"about_ca_topic_score_gemma":0.000023479703,"teacher_disagreement_score":0.2521589,"about_ca_system_score_codex":0.000020587704,"about_ca_system_score_gemma":0.00010602901,"threshold_uncertainty_score":0.77282953},"labels":[],"label_agreement":null},{"id":"W2150265306","doi":"10.1093/glycob/cwu009","title":"Structural basis for selective cross-reactivity in a bactericidal antibody against inner core lipooligosaccharide from Neisseria meningitidis†,‡","year":2014,"lang":"en","type":"article","venue":"Glycobiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Victoria","funders":"National Research Council Canada; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC; Canadian Light Source","keywords":"Neisseria meningitidis; Epitope; Chemistry; Inner core; Antibody; Monoclonal antibody; Glycan; Antigen; Serine; Bacterial outer membrane; Microbiology; Biology; Glycoprotein; Biochemistry; Genetics; Escherichia coli; Bacteria; Gene; Enzyme","score_opus":0.01672264866105489,"score_gpt":0.2890500767042148,"score_spread":0.2723274280431599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150265306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952789,0.000108041444,0.00018184935,0.000095920754,0.0030540002,0.00039628873,0.00050387974,0.0001007313,0.00028041872],"genre_scores_gemma":[0.9973098,0.000015992444,0.00013819608,0.00013873387,0.00032194518,0.00010204561,0.0018246858,0.000029177867,0.000119419215],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980989,0.00023697247,0.00043550835,0.0006041608,0.00000919776,0.0006152569],"domain_scores_gemma":[0.9987282,0.0005877868,0.00021350243,0.00030527802,0.00013183718,0.000033367065],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023703226,0.00032520219,0.0006161864,0.0001701252,0.00025631013,0.00003837992,0.00022537605,0.00057640596,0.00033268385],"category_scores_gemma":[0.00037933717,0.000280832,0.00014427301,0.00020779663,0.00017846446,0.0001960071,0.00010875309,0.00035193455,0.000096407406],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077302806,0.00005892938,0.135604,0.0000069140006,0.00011550957,5.0889633e-7,0.00016902304,0.000008634558,0.8593303,0.00039388967,0.00024330862,0.0032959352],"study_design_scores_gemma":[0.0031783392,0.0005928194,0.7749265,0.000027738477,0.000045506382,0.00005115205,0.000057071655,0.00009521879,0.19955172,0.0010837788,0.019902164,0.00048802156],"about_ca_topic_score_codex":0.0021086207,"about_ca_topic_score_gemma":0.0009130153,"teacher_disagreement_score":0.6597786,"about_ca_system_score_codex":0.000082415594,"about_ca_system_score_gemma":0.00006241843,"threshold_uncertainty_score":0.99996436},"labels":[],"label_agreement":null},{"id":"W2150724125","doi":"10.1097/01.inf.0000160910.17950.59","title":"Summary","year":2005,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.021424154513652423,"score_gpt":0.29260573202138174,"score_spread":0.2711815775077293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150724125","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000490119,0.9915708,0.000011789282,0.000047846224,0.006364656,0.00040294387,0.000096381315,0.00012086318,0.00089465856],"genre_scores_gemma":[0.00014434182,0.9889629,0.0000020003633,0.000034689994,0.0077515594,0.000059214828,0.000066671055,0.000062066785,0.002916579],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977049,0.0007365587,0.000761375,0.00025981342,0.000034957047,0.0005023901],"domain_scores_gemma":[0.99826324,0.00037538947,0.00069893425,0.0004382267,0.00011099736,0.00011319667],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0004740978,0.00048329978,0.0009661707,0.00040671893,0.0010436808,0.0001440417,0.00044036156,0.00039399223,0.0024270674],"category_scores_gemma":[0.00013010352,0.0002735059,0.0010965285,0.00043206674,0.000070842274,0.00013435191,0.00014285426,0.0016394991,0.00271635],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019053568,0.00021301892,0.00040890084,0.00077245897,0.00047436354,0.00001038677,0.000016456224,0.000002338473,3.9048422e-7,0.00007052574,0.057956513,0.9400556],"study_design_scores_gemma":[0.00033773354,0.000048526847,0.00007200334,0.0003004649,0.004823303,0.0073964368,0.0000029288392,8.581769e-8,3.7771557e-8,0.00011482224,0.986581,0.0003226072],"about_ca_topic_score_codex":0.00001508779,"about_ca_topic_score_gemma":0.00000487334,"teacher_disagreement_score":0.93973297,"about_ca_system_score_codex":0.00016792561,"about_ca_system_score_gemma":0.00075490365,"threshold_uncertainty_score":0.9999717},"labels":[],"label_agreement":null},{"id":"W2151312946","doi":"10.1128/genomea.01245-14","title":"Complete Genome Sequence of Haemophilus influenzae Strain 375 from the Middle Ear of a Pediatric Patient with Otitis Media","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; College of Medicine, Drexel University; Institute for Clinical and Translational Research, University of Wisconsin, Madison; National Institutes of Health; University of British Columbia; Drexel University","keywords":"Haemophilus influenzae; Otitis; Strain (injury); Whole genome sequencing; Biology; Middle ear; Microbiology; Genome; Pathogenesis; Gene; Genetics; Bacteria; Immunology; Anatomy","score_opus":0.04324582066872722,"score_gpt":0.22849834727212492,"score_spread":0.1852525266033977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151312946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337757,0.0008179255,0.00009014338,0.000052994397,0.00048300147,0.00025972864,0.004654678,0.000016153677,0.00024779214],"genre_scores_gemma":[0.9981409,0.000115489056,0.0001127553,0.000119859156,0.0001172636,0.000019026482,0.001306002,0.000012639012,0.000056120276],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99892694,0.00014020028,0.00040441766,0.00022662187,0.000049678878,0.00025216924],"domain_scores_gemma":[0.99902296,0.000106523345,0.00031196384,0.00036441113,0.00017235316,0.000021791102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016032186,0.00016289951,0.00030262748,0.00006698932,0.00013301395,0.000010622311,0.00025292265,0.00009288532,0.00046950427],"category_scores_gemma":[0.000032376305,0.00011125232,0.000057572608,0.00020264905,0.00015399867,0.000072076095,0.00009827323,0.00012319861,0.0000826382],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112338515,0.00012457497,0.016745232,0.000022142965,0.00021629974,8.887845e-7,0.0019091705,0.00005605848,0.97990555,0.00017429175,0.000079646976,0.0006537832],"study_design_scores_gemma":[0.005670878,0.0033825412,0.6796023,0.00010029508,0.000458811,0.000051496045,0.0010057418,0.000008726433,0.004366924,0.0008634813,0.3037102,0.00077855826],"about_ca_topic_score_codex":0.00095191825,"about_ca_topic_score_gemma":0.00014427399,"teacher_disagreement_score":0.9755387,"about_ca_system_score_codex":0.000024513876,"about_ca_system_score_gemma":0.000052281703,"threshold_uncertainty_score":0.51407427},"labels":[],"label_agreement":null},{"id":"W2151817333","doi":"10.1099/mic.0.26841-0","title":"DNA-containing membrane vesicles of Pseudomonas aeruginosa PAO1 and their genetic transformation potential","year":2004,"lang":"en","type":"article","venue":"Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":359,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Plasmid; Periplasmic space; Bacterial outer membrane; Pseudomonas aeruginosa; Biology; DNA; Vesicle; Transformation (genetics); Escherichia coli; Lysis; Membrane; Molecular biology; Chemistry; Bacteria; Biophysics; Biochemistry; Gene; Genetics","score_opus":0.007303228477154929,"score_gpt":0.20082927924473243,"score_spread":0.1935260507675775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151817333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99625707,0.0011583593,0.0013145559,0.00033081466,0.0005554884,0.0001720418,0.00007354284,0.00004454297,0.00009358876],"genre_scores_gemma":[0.9993677,0.00017282784,0.00015801332,0.000053405176,0.00004948259,0.000009196645,0.00015110889,0.000010435487,0.000027832491],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991295,0.00009892977,0.00032478187,0.00019719248,0.0000034617588,0.00024615615],"domain_scores_gemma":[0.9996656,0.00003524254,0.000104262304,0.00013212692,0.000048302936,0.000014450695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010412111,0.00016219869,0.00029993668,0.00010701735,0.0001326318,0.000008213376,0.00009034229,0.00025756645,0.00016799878],"category_scores_gemma":[0.000008787398,0.00012802624,0.00007494556,0.00007319884,0.00019248489,0.00007193808,0.00003355572,0.00012403495,0.00003240955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001351397,0.000046188536,0.00020053855,0.0000199516,0.0000955352,6.354662e-7,0.00075832417,0.000036945512,0.9918491,0.0006021904,0.000016549722,0.006238863],"study_design_scores_gemma":[0.0021856048,0.00036015047,0.0042101764,0.00002220717,0.00003463205,0.00080195884,0.00032379662,0.0000010526791,0.9858562,0.0003386386,0.005715262,0.00015036415],"about_ca_topic_score_codex":0.00020580072,"about_ca_topic_score_gemma":0.00007414021,"teacher_disagreement_score":0.0060884985,"about_ca_system_score_codex":0.000016409072,"about_ca_system_score_gemma":0.000033142303,"threshold_uncertainty_score":0.52207583},"labels":[],"label_agreement":null},{"id":"W2152712820","doi":"10.1128/jcm.00449-08","title":"Multicenter Evaluation of the New Vitek 2 <i>Neisseria</i> - <i>Haemophilus</i> Identification Card","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"","keywords":"16S ribosomal RNA; Neisseria; Microbiology; Fastidious organism; Biology; Haemophilus; Reproducibility; Clinical microbiology; Bacteria; Chromatography; Chemistry; Genetics","score_opus":0.07070086860571426,"score_gpt":0.3597378978410252,"score_spread":0.28903702923531094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152712820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98800683,0.001264768,0.000087198314,0.0012007564,0.009112239,0.00020986168,0.000020897809,0.000007019467,0.00009044386],"genre_scores_gemma":[0.998431,0.00033765248,0.0000730978,0.00021909902,0.00042303975,0.0000017841945,0.000018824921,0.000010103723,0.00048536868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965969,0.0012095921,0.0018231054,0.00017077674,0.000022782999,0.00017686732],"domain_scores_gemma":[0.99679756,0.0003740107,0.0016651808,0.00031236646,0.0008185017,0.00003236056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021460715,0.00013135362,0.0005744358,0.00008311928,0.0001267309,0.000005529264,0.0003469177,0.00036908494,0.00033231135],"category_scores_gemma":[0.0011265839,0.00008164294,0.00048763835,0.00015414869,0.0003070999,0.00011195805,0.00007389736,0.00046255594,0.000074569914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003282801,0.0002389403,0.017507274,0.0000045826973,0.00022941666,3.0618256e-7,0.00009782686,0.000021328664,0.9507081,0.00002430345,0.026923252,0.003916414],"study_design_scores_gemma":[0.010045346,0.00074235245,0.28043675,0.0000945126,0.0007672792,0.0023128595,0.000074209376,0.0000067710494,0.40759975,0.0004015413,0.29728016,0.00023846001],"about_ca_topic_score_codex":0.00004014466,"about_ca_topic_score_gemma":0.000025278123,"teacher_disagreement_score":0.54310834,"about_ca_system_score_codex":0.000027722279,"about_ca_system_score_gemma":0.00037893417,"threshold_uncertainty_score":0.36385763},"labels":[],"label_agreement":null},{"id":"W2152831268","doi":"10.1128/jb.185.11.3270-3277.2003","title":"Phosphorylation of the Lipid A Region of Meningococcal Lipopolysaccharide: Identification of a Family of Transferases That Add Phosphoethanolamine to Lipopolysaccharide","year":2003,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Lipid A; Biology; Biochemistry; Transferase; Lipopolysaccharide; Gene; Residue (chemistry); Homology (biology); Phosphorylation; Neisseria meningitidis; Population; Microbiology; Bacteria; Genetics; Enzyme","score_opus":0.024275187746148282,"score_gpt":0.25412179414115216,"score_spread":0.22984660639500387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152831268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99592215,0.0007192167,0.0010525582,0.00012690468,0.0018403553,0.00025738147,0.000043726253,0.0000053826716,0.000032310185],"genre_scores_gemma":[0.9994318,0.00027756047,0.00010563397,0.000022726314,0.000047126792,0.000007162802,0.0000062082627,0.000015135835,0.00008665423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976324,0.00039884605,0.001552277,0.00016957032,0.000053917414,0.00019298267],"domain_scores_gemma":[0.99695194,0.00021821102,0.0019069068,0.00034201666,0.0005526005,0.00002832368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063468586,0.00018263524,0.00081465545,0.00029975947,0.000055876528,0.000004382033,0.00030723307,0.00029195048,0.00019166594],"category_scores_gemma":[0.00037323168,0.00013188443,0.0003410827,0.00024464552,0.00023555435,0.00015215875,0.000040111645,0.000241185,0.0000021693875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000846206,0.00026087186,0.012967804,0.000058403923,0.00025083584,3.8417073e-7,0.0006198118,0.000020944964,0.9820992,0.0010106959,0.00013763795,0.0017272447],"study_design_scores_gemma":[0.0010702163,0.00093809894,0.07757369,0.0001502535,0.00015581895,0.00019237421,0.00029186343,0.0000013453605,0.91847944,0.00010199844,0.00095075514,0.000094165334],"about_ca_topic_score_codex":0.00026551596,"about_ca_topic_score_gemma":0.00003636995,"teacher_disagreement_score":0.064605884,"about_ca_system_score_codex":0.000032763277,"about_ca_system_score_gemma":0.00015437513,"threshold_uncertainty_score":0.53780913},"labels":[],"label_agreement":null},{"id":"W2152956317","doi":"10.1542/peds.112.5.e348","title":"Decrease in Hospital Admissions for Febrile Seizures and Reports of Hypotonic-Hyporesponsive Episodes Presenting to Hospital Emergency Departments Since Switching to Acellular Pertussis Vaccine in Canada: A Report From IMPACT","year":2003,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; BC Children's Hospital; Izaak Walton Killam Health Centre; Montreal Children's Hospital; Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Medicine; Pertussis vaccine; Pediatrics; Vaccination; Immunization; Measles; Meningococcal vaccine; Febrile seizure; Measles-Mumps-Rubella Vaccine; Rubella; Immunology; Epilepsy; Antibody","score_opus":0.00726975391800424,"score_gpt":0.2520075151712388,"score_spread":0.24473776125323457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152956317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566585,0.0019662096,0.00009682911,0.00028589836,0.0009852657,0.00084664416,0.00012958104,0.000012352976,0.000011396155],"genre_scores_gemma":[0.9989039,0.00012545417,0.0006132381,0.000015536381,0.000053301737,0.000101437414,0.00009201944,0.000020787307,0.00007435428],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99827516,0.000098623976,0.00074785674,0.00044153916,0.000039318275,0.00039749854],"domain_scores_gemma":[0.9988298,0.00026664755,0.000304207,0.00028705026,0.00013607692,0.00017624359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030264136,0.00020975713,0.0004048047,0.00025102947,0.00011273455,0.0000119336455,0.000079191734,0.00011970064,0.0001317701],"category_scores_gemma":[0.0064305225,0.000189318,0.000079018,0.0004000461,0.000004402028,0.00010729069,0.00009599446,0.00013253621,0.0000011353338],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093548144,0.00023474073,0.97480834,0.000015476278,0.00004760798,0.00017834861,0.00046935788,0.00007826082,0.021156628,0.00000537388,0.002768198,0.00014410482],"study_design_scores_gemma":[0.00077569846,0.0002550597,0.9868163,0.000021826943,0.00008102648,0.00013029098,0.0003689976,0.000011033267,0.008213691,0.00016204096,0.002844849,0.00031918197],"about_ca_topic_score_codex":0.3915496,"about_ca_topic_score_gemma":0.26630947,"teacher_disagreement_score":0.12524013,"about_ca_system_score_codex":0.00018490419,"about_ca_system_score_gemma":0.0009969536,"threshold_uncertainty_score":0.7720164},"labels":[],"label_agreement":null},{"id":"W2153093505","doi":"10.1086/509619","title":"Clinical and Immunologic Risk Factors for Meningococcal C Conjugate Vaccine Failure in the United Kingdom","year":2006,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children","keywords":"Medicine; Meningococcal disease; Vaccination; Immunogenicity; Immunology; Vaccine failure; Meningococcal vaccine; Conjugate vaccine; Avidity; Antibody titer; Titer; Antibody; Neisseria meningitidis; Immunization; Measles; Biology","score_opus":0.019976383245087513,"score_gpt":0.2869252851190831,"score_spread":0.2669489018739956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153093505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99777025,0.0008746038,0.00011907285,0.0003401135,0.00057010463,0.00024764633,0.000041327177,0.00002141132,0.000015471673],"genre_scores_gemma":[0.99935675,0.0003331467,0.0000050397057,0.00006314005,0.00018913529,0.00000744554,0.000019367988,0.000009266649,0.000016694781],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99834776,0.0008035463,0.0005477543,0.00009051362,0.000018000143,0.00019243854],"domain_scores_gemma":[0.99747753,0.0017730773,0.0004503117,0.00014825191,0.00013510948,0.00001569018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008007938,0.00014688929,0.00030749512,0.00015569436,0.00035171906,0.00003746012,0.00017721519,0.00013078244,0.000054393542],"category_scores_gemma":[0.00045572635,0.00006867349,0.00016247785,0.00019465061,0.0001467349,0.00009340127,0.0000363269,0.00041042024,0.0000037248399],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064723386,0.0004034547,0.98739946,0.0000076015967,0.00024479968,0.0000013480679,0.00016095793,0.00013296866,0.0069963164,0.0006460004,0.0029556032,0.0004042416],"study_design_scores_gemma":[0.0042662057,0.0011180163,0.9711737,0.000028537412,0.0004539752,0.00029628188,0.0004790602,0.000008208993,0.00037425986,0.0019470449,0.019730715,0.0001239846],"about_ca_topic_score_codex":0.0010049222,"about_ca_topic_score_gemma":0.00026747864,"teacher_disagreement_score":0.016775113,"about_ca_system_score_codex":0.000015466605,"about_ca_system_score_gemma":0.000031761305,"threshold_uncertainty_score":0.28004238},"labels":[],"label_agreement":null},{"id":"W2153119855","doi":"10.1128/jb.01875-07","title":"Glucosamine Found as a Substituent of Both Phosphate Groups in<i>Bordetella</i>Lipid A Backbones: Role of a BvgAS-Activated ArnT Ortholog","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipid A; Biology; Bordetella; Bordetella pertussis; Biochemistry; Glucosamine; Microbiology; Bacteria; Genetics","score_opus":0.012309134526809961,"score_gpt":0.2355128835577346,"score_spread":0.22320374903092463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153119855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960309,0.0020162286,0.000025674593,0.00008169284,0.0014271163,0.0001723352,0.00001937802,0.00001262724,0.0002140337],"genre_scores_gemma":[0.9979671,0.0015948422,0.00014649061,0.000042808635,0.00010704618,0.0000065609934,0.000027032476,0.000020878566,0.00008723521],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975689,0.00041942796,0.0013879999,0.00022142424,0.00003434826,0.00036792023],"domain_scores_gemma":[0.9978192,0.00025285932,0.0013193652,0.00026227787,0.00030113314,0.000045171597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004612763,0.00025869315,0.0011400244,0.00042873685,0.00008590252,0.0000045692686,0.0002598489,0.00039848604,0.0007849354],"category_scores_gemma":[0.00022070049,0.0002084299,0.0002662541,0.00031678154,0.0003823691,0.00018815688,0.00008617844,0.00052014366,0.000029762903],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023846654,0.00056035904,0.062354606,0.000026533342,0.00028986367,0.000029845663,0.0005500004,0.000019406301,0.9324997,0.00018607217,0.0000647324,0.0010342345],"study_design_scores_gemma":[0.005470877,0.003515237,0.515696,0.00016023543,0.00010259184,0.006724729,0.0003673183,0.0000025249387,0.44800475,0.0002810926,0.019377274,0.00029738815],"about_ca_topic_score_codex":0.0005226066,"about_ca_topic_score_gemma":0.00013659745,"teacher_disagreement_score":0.48449492,"about_ca_system_score_codex":0.000057102643,"about_ca_system_score_gemma":0.00022401793,"threshold_uncertainty_score":0.8594492},"labels":[],"label_agreement":null},{"id":"W2154067388","doi":"10.1586/erv.09.59","title":"Pediatric combined formulation DTaP–IPV/Hib vaccine","year":2009,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia; Dalhousie University","funders":"","keywords":"Medicine; Diphtheria; Tetanus; Poliomyelitis; Hib vaccine; Immunization; Toddler; Pediatrics; Booster dose; Immunogenicity; Vaccination; Virology; Immunology; Conjugate vaccine; Antibody","score_opus":0.028088081000449197,"score_gpt":0.3437499369339468,"score_spread":0.3156618559334976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154067388","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000034513032,0.99520737,0.000016128346,0.00016060701,0.0022876388,0.0016909387,0.000047748923,0.0001416619,0.0004133849],"genre_scores_gemma":[0.000016478609,0.9961818,0.00009344798,0.0001834309,0.00086584466,0.00020048316,0.0014345279,0.00007184464,0.00095217774],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99630624,0.00043921225,0.0021556974,0.0005988893,0.00004540367,0.00045453644],"domain_scores_gemma":[0.99697787,0.0002630613,0.0014685816,0.00092622876,0.00031696164,0.00004729989],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004465052,0.0008301544,0.004216294,0.0004486226,0.00016658478,0.000020269066,0.0005403856,0.0007008562,0.0027787497],"category_scores_gemma":[0.0002802044,0.0005759905,0.0012506269,0.0008922854,0.0000099255685,0.00020680095,0.00013963945,0.00044117702,0.00053229206],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019506233,0.00025143928,0.000020070856,0.061125692,0.00025676124,0.0000010265368,0.000015766927,2.4873309e-8,0.000083257364,0.00023373184,0.09657769,0.84141505],"study_design_scores_gemma":[0.00068161346,0.00030534953,0.000096015676,0.041568935,0.0012236041,0.00012763892,0.0000020944653,8.8215906e-8,0.000040677533,0.000021534925,0.95540804,0.00052442023],"about_ca_topic_score_codex":0.0000432862,"about_ca_topic_score_gemma":0.000008275376,"teacher_disagreement_score":0.85883033,"about_ca_system_score_codex":0.00007664446,"about_ca_system_score_gemma":0.00017359848,"threshold_uncertainty_score":0.99966913},"labels":[],"label_agreement":null},{"id":"W2154384227","doi":"10.1016/j.ijid.2008.05.065","title":"The Role of Pertussis Booster Vaccinations in Adolescents and Adults","year":2008,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Bordetella pertussis; Pediatrics; Vaccination; Whooping cough; Diphtheria; Booster dose; Tetanus; Pertussis vaccine; Pneumonia; Herd immunity; Immunology; Immunization; Internal medicine; Immune system","score_opus":0.004573144421530182,"score_gpt":0.2281929145889197,"score_spread":0.22361977016738951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154384227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99507767,0.0035910255,0.000009179236,0.00016368656,0.0009269312,0.000050086805,0.00001767329,0.000006073799,0.00015764488],"genre_scores_gemma":[0.99870425,0.0011386148,0.000001909912,0.000025495261,0.00008159709,0.000003418251,0.0000033145182,0.0000046717055,0.00003672405],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99943596,0.00006475875,0.00032124773,0.000061960665,0.000033334105,0.0000827539],"domain_scores_gemma":[0.99925154,0.0000882623,0.00022596502,0.00005634574,0.000359803,0.000018095116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006329892,0.00006756965,0.00012108826,0.00017452177,0.00010014449,0.000014552297,0.00012553023,0.000044485303,0.000056838322],"category_scores_gemma":[0.00017436573,0.0000455309,0.00007972896,0.00006218859,0.000057993402,0.00014917787,0.000040007424,0.0001059724,0.0000055388064],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032002872,0.000348625,0.9750432,0.0000040157233,0.00014812083,0.0000042139577,0.00024222721,0.0000073761466,0.0077174613,0.00024123151,0.00019168528,0.015731826],"study_design_scores_gemma":[0.001749036,0.00014583074,0.9896908,0.00012516756,0.000022592003,0.00066063117,0.00019103209,0.000005357863,0.002377441,0.00048244445,0.0044921287,0.000057548295],"about_ca_topic_score_codex":0.00010619982,"about_ca_topic_score_gemma":0.000087522596,"teacher_disagreement_score":0.015674278,"about_ca_system_score_codex":0.00003301775,"about_ca_system_score_gemma":0.000050288174,"threshold_uncertainty_score":0.18566962},"labels":[],"label_agreement":null},{"id":"W2154706083","doi":"10.1093/cid/civ597","title":"Meningococcal Meningitis Surveillance in the African Meningitis Belt, 2004–2013","year":2015,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"World Health Organization; Bill and Melinda Gates Foundation","keywords":"Medicine; Neisseria meningitidis; Case fatality rate; Meningitis; Incidence (geometry); Meningococcal meningitis; Outbreak; Epidemiology; Disease surveillance; Pediatrics; Demography; Virology; Internal medicine","score_opus":0.044070214694774734,"score_gpt":0.32792339831008227,"score_spread":0.28385318361530754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154706083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897824,0.0024120563,0.00006506932,0.0010012441,0.0025890942,0.00036634732,0.00009918408,0.00022993091,0.0034546868],"genre_scores_gemma":[0.9985244,0.00017434057,0.000007014879,0.00020784127,0.00040204663,0.00013478039,0.00016201293,0.000023893956,0.00036365257],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99723893,0.0010824647,0.0007099252,0.00044389162,0.00004470477,0.0004800526],"domain_scores_gemma":[0.9979908,0.0010955541,0.00020186721,0.000448768,0.00015019895,0.00011279752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095522933,0.00025303368,0.0005149991,0.00011943262,0.00023396921,0.0000802027,0.0003077413,0.0002650526,0.0004236124],"category_scores_gemma":[0.0012077299,0.00018412754,0.00023880976,0.00042040067,0.00041644135,0.00016242152,0.00011694265,0.00046365938,0.00046104426],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015975123,0.0010272823,0.87523144,0.000011009322,0.00021058707,0.000020795373,0.0005183289,0.000045871962,0.000704356,0.0007945938,0.11265006,0.008625911],"study_design_scores_gemma":[0.0048988825,0.0013545001,0.722081,0.000041315117,0.000112036796,0.00014491,0.00071361766,0.0000152218245,0.00011310799,0.0022272766,0.26775455,0.00054354756],"about_ca_topic_score_codex":0.0010978975,"about_ca_topic_score_gemma":0.0010147503,"teacher_disagreement_score":0.1551045,"about_ca_system_score_codex":0.000060944883,"about_ca_system_score_gemma":0.00012959364,"threshold_uncertainty_score":0.7508503},"labels":[],"label_agreement":null},{"id":"W2154792818","doi":"10.1139/w05-085","title":"Antigenic and genetic characterization of serogroup C meningococci isolated from invasive meningococcal disease cases in Canada from 1999 to 2003","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"National Institutes of Health; European Commission; Wellcome Trust","keywords":"Neisseria meningitidis; Serotype; Virology; Meningococcal disease; Biology; Antigen; Neisseriaceae; Microbiology; Meningococcal vaccine; Outbreak; Antigenic variation; Neisseria; Genetics; Virus; Bacteria; Antibiotics","score_opus":0.00779641856629618,"score_gpt":0.19154208242130058,"score_spread":0.1837456638550044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154792818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994552,0.0027388094,0.000025432888,0.00044770932,0.00078453316,0.00016471694,0.0012817611,0.0000026201133,0.0000024232734],"genre_scores_gemma":[0.9989582,0.00014950559,0.00011599315,0.0002732218,0.00009755711,0.0000034741713,0.0003624003,0.000012839436,0.000026844209],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987509,0.0001810468,0.000555026,0.0001923516,0.0000074935056,0.00031316394],"domain_scores_gemma":[0.99912846,0.00009695657,0.00027022234,0.00012910475,0.00017270668,0.00020257632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005899466,0.00016169244,0.00040081234,0.00022840456,0.00007641845,0.000011909871,0.00015418825,0.00014593749,0.0007771406],"category_scores_gemma":[0.00012369487,0.00015497216,0.000037465466,0.00020393723,0.000068954025,0.00007941968,0.000024612646,0.00019327334,0.000011648016],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013430574,0.000013186408,0.17121549,0.0000027854112,0.0001007729,0.0000508916,0.00021885792,0.000014754796,0.8261967,0.0000024873934,0.0006702882,0.0013795262],"study_design_scores_gemma":[0.0015725759,0.00027475358,0.85090554,0.0001342543,0.000096416494,0.00050907524,0.00014653247,0.000005581967,0.1025999,0.0000094622965,0.04346692,0.00027898763],"about_ca_topic_score_codex":0.8828787,"about_ca_topic_score_gemma":0.98812073,"teacher_disagreement_score":0.72359675,"about_ca_system_score_codex":0.0002393943,"about_ca_system_score_gemma":0.0027029472,"threshold_uncertainty_score":0.8509145},"labels":[],"label_agreement":null},{"id":"W2154850739","doi":"10.1128/jcm.02417-09","title":"Novel Duplex Real-Time PCR Assay Detects <i>Bordetella holmesii</i> in Specimens from Patients with Pertussis-Like Symptoms in Ontario, Canada","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Calgary; University of Toronto","funders":"","keywords":"Bordetella pertussis; Medicine; Whooping cough; Pathogen; Microbiology; Bordetella; Polymerase chain reaction; Virology; Biology; Immunology; Bacteria; Genetics; Gene","score_opus":0.012056614561444818,"score_gpt":0.24633962131280465,"score_spread":0.23428300675135982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154850739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939281,0.00004980407,0.0000055940454,0.00022878205,0.005260925,0.00017989565,0.00010128207,0.000008708995,0.00023690931],"genre_scores_gemma":[0.99848104,0.00003225953,0.00038595943,0.00033719226,0.00018300301,0.0000029484675,0.00011586589,0.000024144407,0.0004375914],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99682516,0.0005084537,0.0017698628,0.0003793479,0.000023864659,0.00049330253],"domain_scores_gemma":[0.99687076,0.0016230583,0.00088983175,0.00031518537,0.00021806236,0.00008307688],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010316179,0.00029248444,0.0011389295,0.00018967788,0.000065890476,0.00001631897,0.00036119937,0.00076117937,0.0021067963],"category_scores_gemma":[0.00043592276,0.0002086616,0.00017286942,0.00016151856,0.0002030378,0.00010670775,0.00009505827,0.0020111632,0.00004748386],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011465045,0.00052826887,0.4075568,0.0000014849197,0.00014770907,0.000011154254,0.000033060656,0.000004608544,0.58824754,0.0000043655805,0.0016180364,0.00070043246],"study_design_scores_gemma":[0.008168159,0.0008992667,0.9065003,0.00005962966,0.000055689834,0.00015845726,0.000014566746,9.4482743e-7,0.0042058644,0.000011461317,0.07965792,0.00026776342],"about_ca_topic_score_codex":0.63554066,"about_ca_topic_score_gemma":0.98228496,"teacher_disagreement_score":0.5840417,"about_ca_system_score_codex":0.00017845217,"about_ca_system_score_gemma":0.0012493538,"threshold_uncertainty_score":0.9988054},"labels":[],"label_agreement":null},{"id":"W2155025175","doi":"10.1128/cvi.00682-14","title":"Immunogenicity, Safety, and Antibody Persistence at 3, 5, and 10 Years Postvaccination in Adolescents Randomized to Booster Immunization with a Combined Tetanus, Diphtheria, 5-Component Acellular Pertussis, and Inactivated Poliomyelitis Vaccine Administered with a Hepatitis B Virus Vaccine Concurrently or 1 Month Apart","year":2014,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); University of Manitoba","funders":"","keywords":"Medicine; Tetanus; Diphtheria; Poliovirus; Vaccination; Immunogenicity; Poliomyelitis; Booster dose; Hepatitis A vaccine; Immunization; Whooping cough; Immunology; Pediatrics; Virology; Antibody; Virus","score_opus":0.01398387352562164,"score_gpt":0.27096202804301267,"score_spread":0.25697815451739103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155025175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918452,0.0046049994,0.00015420884,0.0015813599,0.00031237537,0.0013707869,0.00005323609,0.000060481485,0.000017342338],"genre_scores_gemma":[0.99017096,0.008552099,0.000090111396,0.00018963499,0.000047718062,0.00006613346,0.00034491764,0.00004903651,0.0004893765],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9962688,0.0011191794,0.0011636445,0.00084937806,0.000049448263,0.00054953905],"domain_scores_gemma":[0.9982426,0.0005564276,0.000429869,0.00043722856,0.00020437237,0.00012945972],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006997731,0.00052118365,0.0016789176,0.00034482783,0.00035884537,0.00007844203,0.00018123885,0.00040329728,0.00025374585],"category_scores_gemma":[0.00038503853,0.00036654514,0.000077988756,0.00035340738,0.00020517151,0.00024823874,0.00051843066,0.00042651274,0.00001358848],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.34970576,0.00084519817,0.47079864,0.00013717565,0.0010262361,0.000020778654,0.00073615066,0.0000016511037,0.15528625,0.00015487998,0.000067192064,0.021220086],"study_design_scores_gemma":[0.12617043,0.005318367,0.8602185,0.0004536307,0.00028599854,0.00062181026,0.000112424634,0.00010161673,0.0015185792,0.000020199299,0.004679735,0.00049867434],"about_ca_topic_score_codex":0.00188126,"about_ca_topic_score_gemma":0.002566162,"teacher_disagreement_score":0.3894199,"about_ca_system_score_codex":0.000056273406,"about_ca_system_score_gemma":0.000045144538,"threshold_uncertainty_score":0.99987864},"labels":[],"label_agreement":null},{"id":"W2155721781","doi":"10.1586/erv.09.18","title":"Quadrivalent meningococcal ACYW-135 glycoconjugate vaccine for broader protection from infancy","year":2009,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Glycoconjugate; Medicine; Meningococcal vaccine; Vaccination; Immunology; Disease; Virology; Immunization; Biology; Antigen; Internal medicine; Bioinformatics","score_opus":0.04245547328814986,"score_gpt":0.3601154284393218,"score_spread":0.31765995515117196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155721781","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003884318,0.99063927,0.00022322907,0.00048844033,0.0027550715,0.0054094642,0.00020834057,0.00015180216,0.00008556771],"genre_scores_gemma":[0.000007651821,0.9934397,0.00037416886,0.0002159305,0.0012000946,0.0023336753,0.0016762024,0.00009865301,0.0006539626],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99582964,0.000491822,0.002232939,0.00087177067,0.000044206296,0.0005296481],"domain_scores_gemma":[0.9968014,0.00028691915,0.0015221081,0.00097246945,0.00036095394,0.000056179364],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041665725,0.0009649031,0.0044749347,0.00027710802,0.00021671492,0.000031017407,0.00056422566,0.00084132934,0.0021875617],"category_scores_gemma":[0.00038925392,0.0006799362,0.0015798622,0.0004277637,0.00002396512,0.00020020445,0.00014063888,0.00050627056,0.00023054694],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000708357,0.00020854044,0.0000032595171,0.033890914,0.0006825072,5.059387e-7,0.000037481885,3.4609972e-8,0.001460887,0.000057908237,0.035132214,0.92845494],"study_design_scores_gemma":[0.0010348735,0.00037770823,0.00003031262,0.09550886,0.0010471181,0.00008273332,0.0000054675143,2.6279005e-7,0.0006171108,0.000040767092,0.9006509,0.00060386973],"about_ca_topic_score_codex":0.00035455704,"about_ca_topic_score_gemma":0.00002639528,"teacher_disagreement_score":0.927851,"about_ca_system_score_codex":0.00007135713,"about_ca_system_score_gemma":0.00019850855,"threshold_uncertainty_score":0.9995652},"labels":[],"label_agreement":null},{"id":"W2155864303","doi":"10.1128/iai.02572-14","title":"Nonbinding Site-Directed Mutants of Transferrin Binding Protein B Exhibit Enhanced Immunogenicity and Protective Capabilities","year":2014,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"","keywords":"Biology; Immunogenicity; Transferrin; Antigen; Immune system; Transferrin receptor; Mutant; Microbiology; Immunology; Biochemistry; Gene","score_opus":0.011443398427894541,"score_gpt":0.23069627612391166,"score_spread":0.21925287769601712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155864303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979867,0.00011097834,0.0004464333,0.000017139102,0.00029937946,0.0005380171,0.000027351884,0.00014158702,0.00043241214],"genre_scores_gemma":[0.99958986,0.00006209755,0.000031820167,0.000004304845,0.000018711953,0.000067566485,0.000023345481,0.000013024445,0.00018925828],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876326,0.00047997994,0.00031248876,0.0002161023,0.00001720781,0.00021095866],"domain_scores_gemma":[0.9994235,0.0001236432,0.00012432523,0.00018369863,0.0001227701,0.000022035829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043545314,0.0001845444,0.00032664897,0.00018483955,0.0004953225,0.000027714856,0.00004542287,0.00022151433,0.0002086262],"category_scores_gemma":[0.000222453,0.00016882157,0.000064078995,0.00020456655,0.00023399793,0.00020370776,0.000056078214,0.0003342367,0.000013701909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017578488,0.00010310885,0.005108833,0.000069080044,0.00008540822,3.5985952e-8,0.00097307557,5.621221e-7,0.9842299,0.00017788756,0.0000023182631,0.009073969],"study_design_scores_gemma":[0.0012557886,0.0005052932,0.0839826,0.00010078066,0.000033553668,0.000034487304,0.00018625379,0.000010881347,0.9129027,0.00015618019,0.00064565614,0.00018583382],"about_ca_topic_score_codex":0.0048542996,"about_ca_topic_score_gemma":0.00053633895,"teacher_disagreement_score":0.07887377,"about_ca_system_score_codex":0.00003384513,"about_ca_system_score_gemma":0.00002069305,"threshold_uncertainty_score":0.7338281},"labels":[],"label_agreement":null},{"id":"W2156500667","doi":"10.4049/jimmunol.166.10.6250","title":"Activity of Human IgG and IgA Subclasses in Immune Defense Against <i>Neisseria meningitidis</i> Serogroup B","year":2001,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Neisseria meningitidis; Biology; Porin; Microbiology; Immunology; Immune system; Immunoglobulin A; Immunoglobulin G; Antibody; Virology; Gene; Bacterial outer membrane; Bacteria; Genetics; Escherichia coli","score_opus":0.014822693021080677,"score_gpt":0.2522454434222856,"score_spread":0.23742275040120492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156500667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991759,0.0069231964,0.0000151763115,0.0003177569,0.0005973295,0.000093803326,0.000003665429,0.0000107022415,0.0002793795],"genre_scores_gemma":[0.99661565,0.0031769979,0.000011236693,0.000020138536,0.000033978635,0.0000021623564,0.0000040315576,0.000012793903,0.00012301443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985556,0.00050128077,0.0005691994,0.000096198484,0.0000144741525,0.00026327005],"domain_scores_gemma":[0.99883586,0.00023651241,0.00055853964,0.00023185837,0.00012460658,0.000012632739],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068617216,0.00015888887,0.0005037994,0.00021267541,0.00016532095,0.000009629068,0.00023798946,0.00020410364,0.00011758656],"category_scores_gemma":[0.00006962017,0.00010934086,0.00009553527,0.0002060989,0.00030170698,0.0001788273,0.000106334715,0.0004876384,0.0000075739326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093501917,0.00019127925,0.010415151,0.0000072773923,0.0002465296,0.000004671204,0.00044253707,0.0000037232032,0.9850562,0.00021510129,0.000050949955,0.00243151],"study_design_scores_gemma":[0.0037712082,0.0015815846,0.3859055,0.00010089441,0.00012540909,0.0029498986,0.0011348249,8.896166e-7,0.60015875,0.00046445275,0.0036037164,0.00020284328],"about_ca_topic_score_codex":0.0003826619,"about_ca_topic_score_gemma":0.00017261156,"teacher_disagreement_score":0.38489747,"about_ca_system_score_codex":0.000030037769,"about_ca_system_score_gemma":0.000040862105,"threshold_uncertainty_score":0.44587907},"labels":[],"label_agreement":null},{"id":"W2157050063","doi":"10.1128/jcm.01190-07","title":"Molecular Epidemiology of <i>Neisseria meningitidis</i> Isolates from an Outbreak of Meningococcal Disease among Men Who Have Sex with Men, Chicago, Illinois, 2003","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"European Commission; University of Oxford; Wellcome Trust","keywords":"Neisseria meningitidis; Meningococcal disease; Neisseriaceae; Outbreak; Epidemiology; Molecular epidemiology; Virology; Microbiology; Meningococcal Infections; Men who have sex with men; Biology; Medicine; Genotype; Bacteria; Antibiotics; Genetics; Syphilis; Internal medicine; Human immunodeficiency virus (HIV)","score_opus":0.02133400707507096,"score_gpt":0.3253127405649135,"score_spread":0.30397873348984256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157050063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941272,0.0022053025,0.0018599525,0.00026452326,0.00056072493,0.00025707023,0.00021685829,0.00001760509,0.00049073965],"genre_scores_gemma":[0.998022,0.00025398956,0.000746789,0.00019628482,0.00026344098,0.0000036399774,0.00019248549,0.000037111862,0.00028426235],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9937233,0.0016369002,0.0035493579,0.0004833739,0.000018301493,0.0005888037],"domain_scores_gemma":[0.99363613,0.0018356881,0.0030340084,0.00050065137,0.0007744918,0.0002190512],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0034298173,0.00038089108,0.0022629416,0.00022934227,0.00009274271,0.0000053610524,0.000495818,0.00087504194,0.0004007275],"category_scores_gemma":[0.0014363134,0.00026868263,0.00040566488,0.00020201343,0.0011066697,0.00017218887,0.00013382226,0.00092487596,0.000009545155],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035727785,0.00052385125,0.4776932,0.000015834017,0.0009698342,0.000010244641,0.00010799626,0.000037785725,0.51451206,0.00022144965,0.0015690045,0.00076594885],"study_design_scores_gemma":[0.008423987,0.0070836563,0.7704571,0.0002857225,0.00102172,0.00043384958,0.0006317438,0.00006403852,0.19547997,0.00078748685,0.014693386,0.00063735334],"about_ca_topic_score_codex":0.00043946216,"about_ca_topic_score_gemma":0.00010302165,"teacher_disagreement_score":0.3190321,"about_ca_system_score_codex":0.000025344743,"about_ca_system_score_gemma":0.00023477223,"threshold_uncertainty_score":0.9999765},"labels":[{"model":"gpt","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"grok","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"opus","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W2157491697","doi":"10.1099/jmm.0.050369-0","title":"Genetic and antigenic characterization of invasive endemic serogroup B Neisseria meningitidis from Ontario, Canada, in 2001–2010","year":2012,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Public Health Ontario; University of Toronto","funders":"National Institutes of Health; Wellcome Trust","keywords":"Neisseria meningitidis; Outbreak; Biology; Genotype; Multilocus sequence typing; Meningococcal disease; Genetic diversity; Neisseriaceae; Molecular epidemiology; Serotype; clone (Java method); Virology; Microbiology; Genetics; Gene; Bacteria; Medicine; Population; Antibiotics","score_opus":0.01131771183473843,"score_gpt":0.22138075349700403,"score_spread":0.2100630416622656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157491697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948315,0.0017989877,0.00003233555,0.0004089817,0.0027966236,0.00007264988,0.000047979003,0.0000028431075,0.000008106279],"genre_scores_gemma":[0.99878156,0.0006662844,0.00006561022,0.0001365504,0.00016576481,0.0000016352487,0.000088250534,0.000008108393,0.00008625503],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986581,0.00022569389,0.00067419204,0.00011288953,0.00001974171,0.0003093903],"domain_scores_gemma":[0.9991443,0.00017699765,0.00043355318,0.00009248028,0.00007462632,0.00007805556],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003879695,0.0001315433,0.00046380432,0.00012475798,0.0000379186,0.000004144564,0.0001707976,0.0004160367,0.0032485141],"category_scores_gemma":[0.0001531882,0.0001057563,0.00005171145,0.00008230851,0.00011212509,0.000096435986,0.000069921196,0.0004549909,0.000005486515],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007481506,0.00007126193,0.2542224,0.000006406002,0.000100625206,0.0000031391514,0.00026888424,1.11208784e-7,0.7438193,0.000010470465,0.0007899022,0.00063268415],"study_design_scores_gemma":[0.001528847,0.00018682105,0.8956696,0.00010188835,0.000055177712,0.0012876623,0.00008409847,3.305799e-7,0.08010029,0.0000164677,0.020849954,0.00011886445],"about_ca_topic_score_codex":0.45226353,"about_ca_topic_score_gemma":0.6987585,"teacher_disagreement_score":0.663719,"about_ca_system_score_codex":0.00010261292,"about_ca_system_score_gemma":0.00070746127,"threshold_uncertainty_score":0.99766266},"labels":[],"label_agreement":null},{"id":"W2157517438","doi":"10.1177/0885066607299516","title":"Lumbar Puncture and Brain Herniation in Acute Bacterial Meningitis: A Review","year":2007,"lang":"en","type":"review","venue":"Journal of Intensive Care Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":150,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Brain herniation; Lumbar puncture; Anesthesia; Meningitis; Lumbar disc herniation; Glasgow Coma Scale; Coma (optics); External ventricular drain; Intensive care medicine; Surgery; Cerebrospinal fluid; Lumbar; Internal medicine","score_opus":0.03021053508016519,"score_gpt":0.3500145479310174,"score_spread":0.3198040128508522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157517438","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00086114876,0.9921318,0.000012517355,0.0016912069,0.004756992,0.00045071877,0.000033410255,0.000007961705,0.00005423909],"genre_scores_gemma":[0.00006458002,0.99703497,0.000010110413,0.0015374577,0.00089411234,0.000008163152,0.00026695887,0.000027897351,0.00015575488],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99771625,0.0004059504,0.0013973388,0.00021012255,0.000042163825,0.00022818343],"domain_scores_gemma":[0.9951853,0.00028653222,0.001292708,0.00016222382,0.003027779,0.000045429653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000828696,0.00037357045,0.0027936944,0.0005071364,0.00004827003,0.000009641912,0.00015437024,0.00052575406,0.00054297893],"category_scores_gemma":[0.0032130976,0.00022005732,0.00029996855,0.00027334038,0.00011721172,0.00008771979,0.00005562529,0.0010156982,0.000015744921],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007350003,0.000012077206,0.00001429064,0.010142951,0.000782509,0.0001411449,0.00052646105,1.318209e-8,0.0018615848,0.000008780419,0.10042148,0.88601524],"study_design_scores_gemma":[0.0010353107,0.00059656246,0.00008216008,0.11076658,0.00169683,0.007032198,0.00050225906,7.889134e-9,0.000011756734,0.000003693603,0.87811553,0.00015712994],"about_ca_topic_score_codex":0.00003484716,"about_ca_topic_score_gemma":0.00004037097,"teacher_disagreement_score":0.88585806,"about_ca_system_score_codex":0.00015757048,"about_ca_system_score_gemma":0.00016787308,"threshold_uncertainty_score":0.89736766},"labels":[],"label_agreement":null},{"id":"W2158137570","doi":"10.1128/jcm.00601-06","title":"Invasive Meningococcal Disease in Quebec, Canada, Due to an Emerging Clone of ST-269 Serogroup B Meningococci with Serotype Antigen 17 and Serosubtype Antigen P1.19 (B:17:P1.19)","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"Health Canada; European Commission; University of Oxford; Wellcome Trust","keywords":"Neisseria meningitidis; Serotype; Meningococcal disease; clone (Java method); Virology; Microbiology; Meningococcal vaccine; Biology; Antigen; Cluster (spacecraft); Neisseriaceae; Immunology; Genetics; Gene; Bacteria; Antibiotics","score_opus":0.02290291761556503,"score_gpt":0.30510788098936215,"score_spread":0.28220496337379714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158137570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959188,0.0011100965,0.00009702385,0.0014132666,0.000897751,0.0003641578,0.0001465188,0.000015941689,0.000036428937],"genre_scores_gemma":[0.9975732,0.00019644122,0.00043473483,0.0005291517,0.00031141168,0.000007237489,0.00015483383,0.000031184165,0.0007618302],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9963481,0.0007165219,0.001885001,0.00047023897,0.00003209557,0.00054804],"domain_scores_gemma":[0.99748254,0.00056469784,0.0010700498,0.00031999368,0.0003236319,0.00023910984],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009572228,0.00034533686,0.0013262891,0.00028682535,0.00016039384,0.000032305026,0.00034253646,0.000435394,0.00025688962],"category_scores_gemma":[0.00032108655,0.00026833545,0.00016159288,0.00031220404,0.0002892851,0.00027238525,0.00015483037,0.000688596,0.000004679203],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031272047,0.0004501358,0.51922506,0.000029753579,0.0002920468,0.000092446775,0.00011925063,0.00017152591,0.4657926,0.0000833426,0.010061286,0.00055536686],"study_design_scores_gemma":[0.0050674183,0.002120601,0.89228725,0.00020457509,0.00014219059,0.0006136739,0.0002421399,0.0000023958403,0.009408181,0.00008085877,0.08934766,0.0004830253],"about_ca_topic_score_codex":0.21489319,"about_ca_topic_score_gemma":0.72751886,"teacher_disagreement_score":0.51262563,"about_ca_system_score_codex":0.00008821128,"about_ca_system_score_gemma":0.0011817185,"threshold_uncertainty_score":0.9999769},"labels":[],"label_agreement":null},{"id":"W2158400228","doi":"10.1128/jb.186.20.6970-6982.2004","title":"<i>lpt6</i> , a Gene Required for Addition of Phosphoethanolamine to Inner-Core Lipopolysaccharide of <i>Neisseria meningitidis</i> and <i>Haemophilus influenzae</i>","year":2004,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Neisseria meningitidis; Haemophilus influenzae; Biology; Microbiology; Lipopolysaccharide; Neisseriaceae; Neisseria; Bacteria; Virology; Antibiotics; Genetics; Immunology","score_opus":0.019104163164150974,"score_gpt":0.2604787600779542,"score_spread":0.2413745969138032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158400228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646723,0.00082025107,0.0004991392,0.0004122542,0.0012639887,0.00026519873,0.00024202053,0.00001189892,0.000018041133],"genre_scores_gemma":[0.9975888,0.00024051426,0.001684267,0.0001862343,0.00017044191,0.000017917982,0.000059179638,0.000022078444,0.000030556304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984216,0.000065444416,0.0010324458,0.00019281135,0.00001986121,0.00026780326],"domain_scores_gemma":[0.9981916,0.00014856766,0.00095715595,0.00019792348,0.0004513855,0.000053354463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034016708,0.0002045974,0.00080796337,0.0002670764,0.0000766765,0.0000076107153,0.00018208634,0.00029682883,0.000087583365],"category_scores_gemma":[0.00023297475,0.00017340192,0.00017790913,0.00015675163,0.00016264117,0.00018782644,0.000078210986,0.00017947084,0.0000041409326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018067893,0.00014752542,0.0007390828,0.000050704315,0.00023474624,0.0000016911565,0.00029771207,0.000022526088,0.9942374,0.0006564452,0.00038203778,0.0014233298],"study_design_scores_gemma":[0.00393966,0.003524802,0.0067405393,0.00015770442,0.00013750754,0.0010610985,0.0000845444,3.9950308e-7,0.97440046,0.0010939096,0.008688874,0.00017047673],"about_ca_topic_score_codex":0.00011854754,"about_ca_topic_score_gemma":0.000031108622,"teacher_disagreement_score":0.019836925,"about_ca_system_score_codex":0.000038789873,"about_ca_system_score_gemma":0.000124782,"threshold_uncertainty_score":0.7071125},"labels":[],"label_agreement":null},{"id":"W2158822359","doi":"10.1542/peds.2014-1729","title":"Duration of Pertussis Immunity After DTaP Immunization: A Meta-analysis","year":2015,"lang":"en","type":"review","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":198,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Odds ratio; Whooping cough; Pertussis vaccine; Herd immunity; Confidence interval; Vaccination; Booster dose; Meta-analysis; Immunization; Pediatrics; Immunity; Diphtheria; Immunology; Internal medicine; Immune system","score_opus":0.10438543584560749,"score_gpt":0.33814720566344353,"score_spread":0.23376176981783603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158822359","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011281278,0.99806535,0.00014182909,0.000015965883,0.00063718593,0.00032096394,0.00045853166,0.000041316165,0.00020601501],"genre_scores_gemma":[0.0005985952,0.9950462,0.0000710625,0.0000063887205,0.00013853502,0.0001545834,0.002215973,0.000029173741,0.0017394687],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977151,0.00072965707,0.0010413923,0.00027868384,0.000035524812,0.00019965044],"domain_scores_gemma":[0.99770045,0.00022011636,0.0008611939,0.0007184415,0.00047492053,0.000024850977],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000595591,0.00036773927,0.0030659358,0.0007712347,0.000109805806,0.00002840745,0.0002718572,0.00069567177,0.0033269457],"category_scores_gemma":[0.0001716978,0.00025695516,0.0024027592,0.0019726495,0.00005080631,0.000114073395,0.00015573905,0.00037599122,0.0002601093],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001398221,0.0014023414,0.0006584822,0.015015936,0.66155976,0.0000049256305,0.0009384088,0.000015131212,0.00005075079,0.00045022136,0.01227104,0.30749318],"study_design_scores_gemma":[0.0000763527,0.000031253177,0.000030086809,0.000010318236,0.3704175,0.000009839625,0.000008407078,1.852468e-7,0.000002396077,0.0000073430233,0.62923527,0.00017106101],"about_ca_topic_score_codex":0.00022881289,"about_ca_topic_score_gemma":0.00004035674,"teacher_disagreement_score":0.6169642,"about_ca_system_score_codex":0.00005621053,"about_ca_system_score_gemma":0.00024705572,"threshold_uncertainty_score":0.99998826},"labels":[],"label_agreement":null},{"id":"W2159105099","doi":"10.1128/jb.00671-12","title":"Seventeen Sxy-Dependent Cyclic AMP Receptor Protein Site-Regulated Genes Are Needed for Natural Transformation in Haemophilus influenzae","year":2012,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Biology; Regulon; cAMP receptor protein; Gene; Genetics; Mutant; DNA; Transformation (genetics); Promoter; Gene expression","score_opus":0.018133524012226312,"score_gpt":0.2605299955536978,"score_spread":0.2423964715414715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159105099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938712,0.001556801,0.00012003307,0.00090639316,0.0029940277,0.00047288428,0.000047211826,0.000020807087,0.000010601494],"genre_scores_gemma":[0.99885106,0.000069283175,0.00018352785,0.00011889003,0.0003796681,0.000034902154,0.00012620729,0.000018380508,0.00021807152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983317,0.000288828,0.0008290093,0.00012094887,0.000020288378,0.00040917695],"domain_scores_gemma":[0.99892646,0.00008573397,0.0006260602,0.0001297405,0.0001906118,0.00004140215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005176155,0.00019852945,0.00053193915,0.0003352951,0.00010780663,0.000017449895,0.00014589033,0.00038990573,0.0002794403],"category_scores_gemma":[0.00009401701,0.00015640064,0.00018472961,0.00013045063,0.000056725876,0.0004990403,0.00002772841,0.00037517588,0.00006944996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012522965,0.00017039929,0.0076593193,0.00003380315,0.00014527138,4.3872245e-7,0.0006983502,0.0000114484155,0.98669714,0.00005030563,0.0003899988,0.0028912332],"study_design_scores_gemma":[0.011401509,0.0012985088,0.32809994,0.00031214033,0.00016150644,0.0017948969,0.0009440882,0.000009000864,0.4051396,0.00018685193,0.24996838,0.00068357895],"about_ca_topic_score_codex":0.00012988599,"about_ca_topic_score_gemma":0.00019620541,"teacher_disagreement_score":0.5815576,"about_ca_system_score_codex":0.00010657475,"about_ca_system_score_gemma":0.00004425802,"threshold_uncertainty_score":0.6377833},"labels":[],"label_agreement":null},{"id":"W2159536830","doi":"10.1086/589713","title":"Infection with<i>Bordetella parapertussis</i>but Not<i>Bordetella pertussis</i>Causes Pertussis‐Like Disease in Older Pigs","year":2008,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Diagnostic Services Manitoba; University of Saskatchewan","funders":"","keywords":"Bordetella pertussis; Bordetella bronchiseptica; Bordetella; Biology; Whooping cough; Microbiology; Pertussis toxin; Virology; Respiratory tract; Immunology; Pathogenesis; Respiratory system; Bacteria; Vaccination; Receptor; G protein","score_opus":0.010379062401269918,"score_gpt":0.22923996534384722,"score_spread":0.2188609029425773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159536830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922321,0.004838782,0.0001275278,0.00048827726,0.0015707564,0.0003833608,0.000051822186,0.000115181145,0.00019222133],"genre_scores_gemma":[0.9913721,0.007013834,0.000007437779,0.00062577234,0.00033540194,0.00003481168,0.000022360191,0.00006031082,0.00052796997],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972874,0.000803362,0.000876647,0.00031854276,0.00012620648,0.00058787776],"domain_scores_gemma":[0.9975982,0.00066917547,0.00063234277,0.0005068764,0.00040494633,0.00018848709],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003810381,0.0004958258,0.00069637294,0.00051797804,0.0007976124,0.000060069608,0.00031136282,0.0002077726,0.000756081],"category_scores_gemma":[0.0003284764,0.00029690145,0.000378154,0.0006256813,0.0004631199,0.0005079188,0.00009040939,0.00066638377,0.00010590325],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003747825,0.0021798892,0.9426452,0.00008168015,0.0006841517,0.000098016484,0.0008596519,0.0010291445,0.04184968,0.000047271293,0.0049015586,0.0018759532],"study_design_scores_gemma":[0.004837879,0.0010008626,0.96848494,0.00025161525,0.0007410023,0.0024666584,0.00016225607,0.00001439404,0.0045482665,0.00008465143,0.016845264,0.00056222704],"about_ca_topic_score_codex":0.0007368804,"about_ca_topic_score_gemma":0.00030564197,"teacher_disagreement_score":0.037301414,"about_ca_system_score_codex":0.00014637416,"about_ca_system_score_gemma":0.0004171324,"threshold_uncertainty_score":0.9999483},"labels":[],"label_agreement":null},{"id":"W2160009990","doi":"10.1136/adc.2006.105916","title":"Effect of meningitis in infancy on school-leaving examination results","year":2007,"lang":"en","type":"article","venue":"Archives of Disease in Childhood","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Meningitis Research Foundation","keywords":"Medicine; Meningitis; Pediatrics; Bacterial meningitis; Quarter (Canadian coin)","score_opus":0.004607731668435443,"score_gpt":0.24781613990299503,"score_spread":0.24320840823455958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160009990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99609077,0.00028142252,0.000009740121,0.00003049637,0.00017344617,0.00022813269,0.000052218016,0.000014197455,0.0031195753],"genre_scores_gemma":[0.9997587,0.000049544207,0.00002307429,0.0000050907433,0.000022866525,0.000008563699,0.00008677954,0.0000080955315,0.000037260175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99898434,0.0002402747,0.00039813283,0.0001797016,0.000017349432,0.00018023034],"domain_scores_gemma":[0.99881285,0.00083645515,0.00012997579,0.0001836361,0.0000096728545,0.000027408787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040403105,0.0001083373,0.00021366635,0.00042911113,0.000029088387,0.000002983967,0.000096983626,0.000055470748,0.00003236298],"category_scores_gemma":[0.0006202717,0.00009682047,0.00006805307,0.00016902616,0.00005832951,0.00006755856,0.0000421228,0.00016110015,0.000009127429],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005146452,0.0012352747,0.62596667,0.00014201102,0.00007692635,0.0000066087855,0.0020068611,0.000111754074,0.21110411,0.0007114196,0.000028177765,0.15346374],"study_design_scores_gemma":[0.0029814774,0.00057933124,0.9055566,0.00040167413,0.000012956876,0.0000011148868,0.000024193485,0.0000020345262,0.09012799,0.00019331322,0.000043856227,0.00007542656],"about_ca_topic_score_codex":0.0001553702,"about_ca_topic_score_gemma":0.00007589856,"teacher_disagreement_score":0.27958995,"about_ca_system_score_codex":0.000008586761,"about_ca_system_score_gemma":0.000025452351,"threshold_uncertainty_score":0.39482242},"labels":[],"label_agreement":null},{"id":"W2160189072","doi":"10.1093/brain/awl052","title":"Neuropsychological sequelae of bacterial meningitis: the influence of alcoholism and adjunctive dexamethasone therapy","year":2006,"lang":"en","type":"letter","venue":"Brain","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Dexamethasone; Neuropsychology; Medicine; Adjunctive treatment; Pharmacotherapy; Bacterial meningitis; Psychiatry; Psychology; Meningitis; Internal medicine; Cognition","score_opus":0.02000046815441031,"score_gpt":0.25557570073214003,"score_spread":0.23557523257772972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160189072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96350485,0.0008887033,0.000004965543,0.033965446,0.0008298142,0.0003080558,0.0002545001,0.000026833668,0.0002168529],"genre_scores_gemma":[0.9491824,0.00028136084,0.000043174674,0.047503915,0.00093115994,0.00006796898,0.0006986263,0.000053089923,0.0012383086],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99840397,0.00061157224,0.0004025278,0.00031877754,0.000024664007,0.0002384833],"domain_scores_gemma":[0.99854916,0.0006322212,0.0003651246,0.00033864018,0.00010773825,0.0000070830115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023493925,0.0002529126,0.00050697214,0.00009610729,0.00008389169,0.000014876253,0.00023191524,0.00083727733,0.00042267083],"category_scores_gemma":[0.00010330644,0.00016014128,0.0001193616,0.00012364997,0.0005194047,0.000054869797,0.00011001207,0.00078453176,0.000010151641],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016343892,0.000041531344,0.00020409009,0.000015660782,0.00016400029,0.0000042678585,0.00010776192,0.0000016810674,0.6572626,0.00003982159,0.33942765,0.0025674992],"study_design_scores_gemma":[0.0019709666,0.00065515406,0.1690086,0.00006898311,0.00006605904,0.00018649246,0.000015230339,1.0880666e-7,0.016524471,0.00055566314,0.81066984,0.00027840908],"about_ca_topic_score_codex":0.00056458695,"about_ca_topic_score_gemma":0.0000142726885,"teacher_disagreement_score":0.6407381,"about_ca_system_score_codex":0.00000785736,"about_ca_system_score_gemma":0.000031875334,"threshold_uncertainty_score":0.6530372},"labels":[],"label_agreement":null},{"id":"W2160354626","doi":"10.1503/cmaj.111304","title":"Acute bacterial meningitis in adults","year":2012,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Bacterial meningitis; Meningitis; Medicine; Lumbar puncture; Retrospective cohort study; Antimicrobial; Intensive care medicine; Pediatrics; Surgery; Internal medicine; Microbiology; Cerebrospinal fluid; Biology","score_opus":0.004932923461197378,"score_gpt":0.21830302647874092,"score_spread":0.21337010301754356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160354626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876145,0.00022560335,0.0000044398644,0.003561444,0.0068101687,0.00004615753,0.000030452438,0.000011304752,0.0016959406],"genre_scores_gemma":[0.99728703,0.00010000681,0.000011314946,0.0004799956,0.0014887436,0.000004713842,0.000038488066,0.000007350886,0.000582354],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989143,0.0001724008,0.00027896606,0.00006882652,0.000048974507,0.00051655195],"domain_scores_gemma":[0.99940467,0.000061704275,0.00010422467,0.00004715344,0.00008668993,0.0002955549],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00075792446,0.00007754809,0.00015125898,0.00015819355,0.000170901,0.000029192212,0.00009750344,0.00045578255,0.023203228],"category_scores_gemma":[0.0003986953,0.00007036934,0.000052960837,0.00012381603,0.000015465375,0.00019598466,0.000011200348,0.0005839141,0.0007419881],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012068477,0.00015443462,0.61723137,0.0000058570968,0.0004916669,0.00006239588,0.001621524,2.5878083e-7,0.0154257715,0.00083864405,0.29765123,0.06639614],"study_design_scores_gemma":[0.0019184896,0.00004351381,0.17619807,0.00004725092,0.000016972235,0.0009257017,0.00012239821,8.9686745e-7,0.0005722907,0.000020725101,0.82000947,0.00012425339],"about_ca_topic_score_codex":0.003906563,"about_ca_topic_score_gemma":0.026821388,"teacher_disagreement_score":0.52235824,"about_ca_system_score_codex":0.00041356438,"about_ca_system_score_gemma":0.00047102,"threshold_uncertainty_score":0.9909366},"labels":[],"label_agreement":null},{"id":"W2160684074","doi":"10.1001/jama.296.16.2012","title":"How Do I Perform a Lumbar Puncture and Analyze the Results to Diagnose Bacterial Meningitis?","year":2006,"lang":"en","type":"review","venue":"JAMA","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":184,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Foothills Medical Centre; University Health Network; St. Michael's Hospital; University of Calgary","funders":"University of Ottawa","keywords":"Medicine; Confidence interval; Lumbar puncture; Meningitis; Randomized controlled trial; Meta-analysis; Adverse effect; Relative risk; Cochrane Library; Odds ratio; MEDLINE; Diagnostic odds ratio; Credible interval; Absolute risk reduction; Internal medicine; Cerebrospinal fluid; Surgery","score_opus":0.018790888240760906,"score_gpt":0.2719692669771877,"score_spread":0.2531783787364268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160684074","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015060986,0.9794592,0.0000016323304,0.0010082178,0.0023860112,0.0007810557,0.0007496923,0.000055160057,0.00049803336],"genre_scores_gemma":[0.00222426,0.98933816,0.000014111492,0.000041218736,0.0015881883,0.00018987928,0.0011687628,0.000039828206,0.0053956006],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99847627,0.00026854425,0.00041691653,0.00047085294,0.000019267603,0.00034816645],"domain_scores_gemma":[0.9989168,0.00022462393,0.0002567145,0.0004909944,0.00007732384,0.000033517717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029920813,0.00042935985,0.0010540438,0.00014698299,0.00041420138,0.00057824724,0.0002619872,0.00080429256,0.00032019225],"category_scores_gemma":[0.00027377965,0.00023473917,0.00028703024,0.00024627504,0.00009350596,0.000118337324,0.00019603864,0.0005615631,0.00012658145],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004268749,0.00003109018,0.000008512632,0.00037773376,0.00024547364,0.000003523228,0.000085055195,3.325745e-8,0.0003250905,0.000078811376,0.08238707,0.9164149],"study_design_scores_gemma":[0.00077832415,0.00013607845,0.00047252915,0.0010034443,0.0004942498,0.00024434534,0.000015865231,3.4336193e-8,0.00003504249,0.000009408199,0.996524,0.00028667416],"about_ca_topic_score_codex":0.00024357132,"about_ca_topic_score_gemma":0.0002687407,"teacher_disagreement_score":0.9161282,"about_ca_system_score_codex":0.0000448856,"about_ca_system_score_gemma":0.00008134003,"threshold_uncertainty_score":0.95723855},"labels":[],"label_agreement":null},{"id":"W2161044742","doi":"10.1590/s0102-311x2013000700003","title":"Should acellular pertussis vaccine be recommended to healthcare professionals?","year":2013,"lang":"en","type":"review","venue":"Cadernos de Saúde Pública","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Fakultet Medicinskih Nauka, Univerziteta U Kragujevcu","keywords":"Medicine; Vaccination; Health professionals; Christian ministry; Epidemiology; Family medicine; Public health; Health care; Whooping cough; Vaccination policy; Environmental health; Nursing; Political science; Immunology","score_opus":0.1058728620674618,"score_gpt":0.3816655134677069,"score_spread":0.2757926514002451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161044742","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022398285,0.9707986,0.000027218202,0.023445629,0.002426069,0.0021277466,0.00031885877,0.00025438386,0.00037751434],"genre_scores_gemma":[0.0001366521,0.9773779,0.00015878279,0.0024699538,0.00052213203,0.001462542,0.0015093291,0.00014585572,0.016216874],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961969,0.0009202915,0.001022726,0.00085967255,0.00004185962,0.0009585291],"domain_scores_gemma":[0.9978985,0.00036381523,0.00042213371,0.00090276945,0.00019970885,0.00021307619],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00038145,0.0007765282,0.0021525312,0.0004939689,0.0004538972,0.00007051578,0.0006760211,0.0020231996,0.008208534],"category_scores_gemma":[0.00024717755,0.0005746089,0.0006368244,0.0005467834,0.000028661061,0.00011570664,0.00041012993,0.0015986915,0.0033287816],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023409148,0.00019608243,0.000020313957,0.003234974,0.00046226796,0.0000027630447,0.00014149978,3.7520532e-8,0.00096387486,0.0003731316,0.35613874,0.6384429],"study_design_scores_gemma":[0.00039838106,0.00017527523,0.00003001807,0.0030882899,0.00038974328,0.00025632983,0.000060485247,2.0045572e-7,0.00020956699,0.000025573845,0.99474865,0.0006174707],"about_ca_topic_score_codex":0.00032374143,"about_ca_topic_score_gemma":0.00004464075,"teacher_disagreement_score":0.63860995,"about_ca_system_score_codex":0.00030396518,"about_ca_system_score_gemma":0.00046772178,"threshold_uncertainty_score":0.99967057},"labels":[],"label_agreement":null},{"id":"W2161406944","doi":"10.1128/iai.01710-07","title":"Application of Capillary Electrophoresis Mass Spectrometry and Liquid Chromatography Multiple-Step Tandem Electrospray Mass Spectrometry To Profile Glycoform Expression during <i>Haemophilus influenzae</i> Pathogenesis in the Chinchilla Model of Experimental Otitis Media","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Institute on Deafness and Other Communication Disorders; National Institutes of Health; Medical Research Council; Vetenskapsrådet","keywords":"Haemophilus influenzae; Microbiology; Mass spectrometry; Chromatography; Electrospray; Biology; Haemophilus; Pasteurellaceae; Glycan; Tandem mass spectrometry; Glycosylation; Otitis; Bacteria; Chemistry; Molecular biology; Biochemistry; Glycoprotein; Antibiotics","score_opus":0.00936004119507799,"score_gpt":0.22501183489179416,"score_spread":0.21565179369671617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161406944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956642,0.0020060285,0.0014597516,0.000022014323,0.00011409833,0.0005293389,0.00004389349,0.000045377103,0.00011530441],"genre_scores_gemma":[0.99700403,0.0021823808,0.0005717172,0.000026864009,0.000035243538,0.00009743118,0.00005600364,0.000020462634,0.000005876358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986384,0.00023508002,0.00047575796,0.0002854814,0.000060045997,0.00030526033],"domain_scores_gemma":[0.99921465,0.00011554475,0.00022720646,0.0003311974,0.000073925985,0.000037463687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002604374,0.00024649483,0.00041017524,0.0005271759,0.0004134807,0.0000128999245,0.00013051362,0.00023503118,0.00003737528],"category_scores_gemma":[0.00006211812,0.00020143943,0.00010288466,0.00074530067,0.00016456816,0.0001713472,0.000079366444,0.00031516896,0.0000026905984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042282834,0.00023251952,0.08413066,0.000033682438,0.000048260546,5.547689e-7,0.0006292144,0.000014840404,0.91432625,0.00005322916,0.000017246115,0.00009074223],"study_design_scores_gemma":[0.0009613796,0.0005308479,0.29499164,0.00002470375,0.000017428267,0.00012672771,0.00013279282,0.00004302844,0.7029525,0.000027775632,0.00004277063,0.00014838846],"about_ca_topic_score_codex":0.0009917654,"about_ca_topic_score_gemma":0.00009082943,"teacher_disagreement_score":0.2113737,"about_ca_system_score_codex":0.00005896854,"about_ca_system_score_gemma":0.000031745283,"threshold_uncertainty_score":0.8214461},"labels":[],"label_agreement":null},{"id":"W2161796519","doi":"10.1586/14760584.5.2.175","title":"An adolescent and adult formulation combined tetanus, diphtheria and five-component pertussis vaccine","year":2006,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Reactogenicity; Filamentous haemagglutinin adhesin; Medicine; Pertactin; Tetanus; Diphtheria; Context (archaeology); Vaccination; Pediatrics; Immunization; Immunology; Pertussis vaccine; Bordetella pertussis; Pertussis toxin; Immune system; Internal medicine; Biology","score_opus":0.01757430457859491,"score_gpt":0.3188075675243757,"score_spread":0.3012332629457808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161796519","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011444904,0.9964754,0.000009174436,0.00018138508,0.00062626856,0.0013672974,0.000095757896,0.00005349681,0.00004675762],"genre_scores_gemma":[0.0004155082,0.99647653,0.000107311156,0.00012436903,0.0002331964,0.0001593239,0.002206801,0.000058541715,0.00021844548],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973191,0.00042454802,0.0013215827,0.0005950426,0.00003335896,0.00030638627],"domain_scores_gemma":[0.99824786,0.00012078335,0.00075927796,0.0005920218,0.00022435444,0.00005569877],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025279124,0.0006743927,0.002825416,0.00019734682,0.00018042012,0.000032315103,0.00022774348,0.0004225415,0.00046578515],"category_scores_gemma":[0.00008242279,0.00045006975,0.00035245318,0.00022148811,0.000028527227,0.00019451889,0.00012323409,0.00025863294,0.000016133232],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056688405,0.0004328304,0.000142736,0.065579206,0.00034018408,0.0000011061485,0.000053533968,3.6536374e-8,0.0014071921,0.00021130932,0.016764693,0.9150105],"study_design_scores_gemma":[0.00089401874,0.0003162551,0.0011507565,0.050651483,0.0006936003,0.00018607525,0.000012575082,0.000002057463,0.000060498933,0.000011140793,0.9455385,0.0004830188],"about_ca_topic_score_codex":0.00030879487,"about_ca_topic_score_gemma":0.000034861445,"teacher_disagreement_score":0.9287738,"about_ca_system_score_codex":0.00004030733,"about_ca_system_score_gemma":0.000048500493,"threshold_uncertainty_score":0.9997951},"labels":[],"label_agreement":null},{"id":"W2162108217","doi":"10.1136/bmj.330.7506.1475","title":"The role of healthcare delivery in the outcome of meningococcal disease in children: case-control study of fatal and non-fatal cases","year":2005,"lang":"en","type":"article","venue":"BMJ","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":182,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Mary's Hospital Centre","funders":"","keywords":"Medicine; Odds ratio; Meningococcal disease; Disease; Medical record; Confidence interval; Multivariate analysis; Pediatrics; Health care; Group B; Emergency medicine; Intensive care medicine; Internal medicine; Neisseria meningitidis","score_opus":0.01237368072816946,"score_gpt":0.2840840653158472,"score_spread":0.2717103845876777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162108217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99749917,0.0013526012,5.386607e-7,0.00028002748,0.000052362928,0.0006428106,0.00016277401,0.0000026604755,0.0000070491583],"genre_scores_gemma":[0.9998876,0.000015587746,0.000002402427,0.000014472439,0.000028618777,0.000034030363,0.0000075441353,0.0000035594574,0.0000061863725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99913466,0.00026255797,0.00038156696,0.00009493776,0.000013509041,0.00011274996],"domain_scores_gemma":[0.99944276,0.00021980972,0.00012220918,0.00017715317,0.00002879003,0.000009258152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032558895,0.00007285143,0.00019808425,0.000056040182,0.000067026565,0.0000035280532,0.00008121888,0.00004349577,0.000012087385],"category_scores_gemma":[0.000056778634,0.00004281541,0.00003498835,0.000073183845,0.00006694851,0.000040970022,0.000039959683,0.00010742249,9.74313e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045045806,0.00036346892,0.98814166,0.000007892807,0.00005387459,0.000010349685,0.0009300751,0.000015482225,0.0059931213,0.00004745837,0.000014849628,0.003971302],"study_design_scores_gemma":[0.0021777272,0.0003809385,0.9934565,0.0000120755085,0.000027192807,0.0002440067,0.002723832,0.000015038309,0.0008312133,0.0000047108406,0.000079870755,0.000046904606],"about_ca_topic_score_codex":0.00908725,"about_ca_topic_score_gemma":0.009179073,"teacher_disagreement_score":0.005314822,"about_ca_system_score_codex":0.0000071069217,"about_ca_system_score_gemma":0.00002079948,"threshold_uncertainty_score":0.9975113},"labels":[],"label_agreement":null},{"id":"W2162319245","doi":"10.1086/322587","title":"Complications of Meningococcal Disease in College Students","year":2001,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Santé Montérégie","funders":"","keywords":"Medicine; Meningococcal disease; Retrospective cohort study; Case fatality rate; Meningococcal Infections; Disease; Pediatrics; Neisseria meningitidis; Emergency medicine; Family medicine; Epidemiology; Surgery; Internal medicine","score_opus":0.03802635269611707,"score_gpt":0.37321686062405257,"score_spread":0.3351905079279355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162319245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970717,0.00047867335,0.000040795836,0.00015121931,0.00089691184,0.00031358734,0.0001841544,0.00009308279,0.0007698906],"genre_scores_gemma":[0.9991547,0.00024630845,0.0000019334675,0.00010103183,0.00006737308,0.000081387254,0.00009467644,0.000011588093,0.0002410248],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99859625,0.0002647721,0.00063858624,0.0002706521,0.000021413405,0.00020835444],"domain_scores_gemma":[0.9989147,0.00043642207,0.00014923849,0.00031099457,0.00010456472,0.00008405057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016985084,0.0001297193,0.0003472146,0.00012498254,0.00011138164,0.000012072088,0.00017857918,0.00012212878,0.00048123006],"category_scores_gemma":[0.00047456753,0.00011832778,0.00018836347,0.00029452692,0.00021868464,0.000088507324,0.000104723506,0.00017019972,0.00020213706],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012534857,0.0029052251,0.99240625,0.0000104506535,0.00008332177,0.0000031470333,0.00001086172,0.000014888726,0.0010293834,0.0013104677,0.001260014,0.00084063254],"study_design_scores_gemma":[0.0020778913,0.00017446082,0.9831321,0.000036730067,0.00007653917,0.000003941905,0.000018370192,0.0000058143,0.00003604712,0.00085489405,0.013461988,0.000121180194],"about_ca_topic_score_codex":0.000093004324,"about_ca_topic_score_gemma":0.00008689424,"teacher_disagreement_score":0.012201974,"about_ca_system_score_codex":0.00002652333,"about_ca_system_score_gemma":0.000069113186,"threshold_uncertainty_score":0.52691317},"labels":[],"label_agreement":null},{"id":"W2162434670","doi":"10.1016/j.jinf.2015.07.007","title":"Genomic resolution of an aggressive, widespread, diverse and expanding meningococcal serogroup B, C and W lineage","year":2015,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":225,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"South African Medical Research Council; European Commission; Meningitis Research Foundation; Wellcome Trust; Wellcome","keywords":"Lineage (genetic); Meningococcal disease; Neisseria meningitidis; Virology; Meningococcal vaccine; Biology; Genetics; Microbiology; Gene; Bacteria","score_opus":0.02871415326866444,"score_gpt":0.2829267514584534,"score_spread":0.254212598189789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162434670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997988,0.00064955855,0.00028332413,0.000016721388,0.0009512375,0.000053703425,0.0000029681062,0.000009623732,0.000044884582],"genre_scores_gemma":[0.9993702,0.0002887651,0.00016341655,0.0000049748783,0.00013711277,9.2240765e-7,0.000004554684,0.0000052617884,0.000024764255],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99944377,0.000118557946,0.00026368367,0.000074858704,0.0000138273435,0.0000853179],"domain_scores_gemma":[0.9992548,0.000038417926,0.0004659547,0.000053712673,0.00015060362,0.000036475372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003741644,0.000073395124,0.00017822288,0.00016363322,0.00008839353,0.000017207274,0.000023226004,0.00011823082,0.000018952984],"category_scores_gemma":[0.000116113624,0.00005988739,0.000034627177,0.00006165487,0.00006148026,0.0003399412,0.00003452576,0.0001445026,0.00000203056],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042818315,0.000088491666,0.105506696,0.0000121984685,0.00008478976,0.0000022390986,0.0004938679,0.000038893373,0.8870506,0.000049419028,0.00019419924,0.0060503907],"study_design_scores_gemma":[0.0079951,0.0054126913,0.71579117,0.00030129543,0.00031727276,0.005292771,0.001051156,0.00014004126,0.25469133,0.00028775114,0.008414233,0.00030520745],"about_ca_topic_score_codex":0.0002199754,"about_ca_topic_score_gemma":0.000040170697,"teacher_disagreement_score":0.6323593,"about_ca_system_score_codex":0.000032980213,"about_ca_system_score_gemma":0.00002272855,"threshold_uncertainty_score":0.24421367},"labels":[],"label_agreement":null},{"id":"W2162559414","doi":"","title":"Vaccination during pregnancy.","year":2011,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Rubella; Pregnancy; Tetanus; Measles; Vaccination; Rubella vaccine; Pediatrics; Immunology; MMR vaccine","score_opus":0.029953053146863827,"score_gpt":0.20525454214560074,"score_spread":0.1753014889987369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162559414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97814053,0.0004673871,0.000015447906,0.000028163797,0.0011257298,0.00023888396,0.0000026393654,0.00009939426,0.019881815],"genre_scores_gemma":[0.9940605,0.000032541517,0.000009229312,0.0000046347627,0.000026350068,0.0005030577,0.0000071156724,0.00000577755,0.005350782],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99960893,0.000026390886,0.000089999725,0.00009906843,0.0000032588098,0.00017236998],"domain_scores_gemma":[0.9998254,0.0000059526947,0.000033582222,0.00010222272,0.000023607874,0.000009207543],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000032316337,0.000053350075,0.00006360136,0.00004989916,0.00008443808,0.0000051224533,0.000053252355,0.00007324706,0.0011348773],"category_scores_gemma":[0.000018655668,0.00004616161,0.000027923377,0.00005828966,0.000007470022,0.00009556204,0.000024154093,0.000055518405,0.00017230498],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002474184,0.00052066083,0.11353346,0.000062093815,0.00030629674,0.0000049566584,0.001019668,2.404218e-7,0.13822377,0.0050345114,0.0015473365,0.73949957],"study_design_scores_gemma":[0.00039321635,0.000007579939,0.88144356,0.0000029705818,0.000009202108,0.000029494431,0.000009499649,2.83051e-8,0.1145658,0.00011319992,0.003370491,0.000054950026],"about_ca_topic_score_codex":0.00005599979,"about_ca_topic_score_gemma":0.000017622586,"teacher_disagreement_score":0.7679101,"about_ca_system_score_codex":0.000012490898,"about_ca_system_score_gemma":0.00000255455,"threshold_uncertainty_score":0.9997782},"labels":[],"label_agreement":null},{"id":"W2162677492","doi":"10.1007/978-3-642-10745-0_53","title":"Identification of Specific Genomic Regions Responsible for the Invasivity of Neisseria Meningitidis","year":2010,"lang":"en","type":"book-chapter","venue":"Studies in classification, data analysis, and knowledge organization","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Neisseria meningitidis; Identification (biology); Biology; Neisseria; Computational biology; Genome; Genetics; Virology; Gene; Bacteria","score_opus":0.10461134056263498,"score_gpt":0.33865356558354226,"score_spread":0.23404222502090727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162677492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40614223,0.33425784,0.17303272,0.0068482608,0.022796066,0.0140231075,0.027651707,0.0005408608,0.014707226],"genre_scores_gemma":[0.90888363,0.051890083,0.00019531781,0.0000037497657,0.00018140543,0.000036268997,0.008588862,0.0000526815,0.030168006],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983544,0.00008789148,0.00091688836,0.00050301134,0.000021619158,0.00011620184],"domain_scores_gemma":[0.99603677,0.00063923746,0.00092441007,0.0012317159,0.0011569379,0.000010946587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008503975,0.00021223174,0.0006054975,0.00053589296,0.00035704,0.000020887712,0.00039091613,0.00033331712,0.00011737061],"category_scores_gemma":[0.0006693687,0.00017264184,0.00007676787,0.00065314927,0.00054615724,0.00012929617,0.0002582435,0.00019157887,0.000012249392],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009259718,0.00014502139,0.007725787,0.00026833988,0.004169038,4.3096936e-8,0.0018446383,0.0000025718762,0.83949924,0.13904049,0.0054346933,0.0017775497],"study_design_scores_gemma":[0.002589202,0.00022065855,0.32755855,0.00043427025,0.017641835,0.000021962403,0.0029773668,0.00020611068,0.12448769,0.025203176,0.49723116,0.0014280077],"about_ca_topic_score_codex":0.00005016324,"about_ca_topic_score_gemma":0.0032001478,"teacher_disagreement_score":0.71501154,"about_ca_system_score_codex":0.00004650021,"about_ca_system_score_gemma":0.0001606152,"threshold_uncertainty_score":0.704013},"labels":[],"label_agreement":null},{"id":"W2162736840","doi":"10.1086/644755","title":"Keeping Vulnerable Children Safe from Pertussis Preventing Nosocomial Pertussis Transmission in the Neonatal Intensive Care Unit","year":2009,"lang":"en","type":"article","venue":"Infection Control and Hospital Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Medicine; Neonatal intensive care unit; Whooping cough; Transmission (telecommunications); Bordetella pertussis; Pediatrics; Intensive care medicine; Virology; Vaccination","score_opus":0.014322687863765683,"score_gpt":0.2692489745070074,"score_spread":0.25492628664324174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162736840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.983704,0.0069104503,0.0017847124,0.0059859874,0.00081471546,0.00048650743,0.000043605454,0.00006435165,0.00020568108],"genre_scores_gemma":[0.9964782,0.000498635,0.00003983047,0.0024051624,0.00027246465,0.000046017936,0.00020384864,0.000010268844,0.000045575325],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99719733,0.0013777076,0.00055305165,0.00043061824,0.000016580638,0.00042472428],"domain_scores_gemma":[0.99814725,0.0012759066,0.00019762471,0.00019003647,0.00015420651,0.00003494933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006515268,0.00025746893,0.00060731504,0.00013400268,0.0005887806,0.000025708741,0.00012263792,0.000425595,0.0001841072],"category_scores_gemma":[0.0008851369,0.00017620751,0.00018930814,0.00013802167,0.00011631704,0.00018943974,0.000025773319,0.00069478736,0.000028113738],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000359725,0.00010955315,0.74773943,0.000009455545,0.0002408841,0.00000267598,0.0041861148,0.000096903605,0.012985889,0.0006618628,0.0006496923,0.2329578],"study_design_scores_gemma":[0.003273047,0.0007495308,0.97812235,0.000060548096,0.00011956524,0.00008265696,0.00089241465,0.000116802556,0.00028256187,0.0010690591,0.014964419,0.00026704528],"about_ca_topic_score_codex":0.0080555165,"about_ca_topic_score_gemma":0.0005526848,"teacher_disagreement_score":0.23269075,"about_ca_system_score_codex":0.000033227847,"about_ca_system_score_gemma":0.000027287575,"threshold_uncertainty_score":0.99854994},"labels":[],"label_agreement":null},{"id":"W2164154937","doi":"10.1586/14760584.5.2.269","title":"Immunization strategies for the control of serogroup C meningococcal disease in developed countries","year":2006,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Meningococcal disease; Vaccination; Immunogenicity; Epidemiology; Immunization; Medicine; Meningococcal vaccine; Vaccination schedule; Immunology; Outbreak; Incidence (geometry); Immunity; Disease; Virology; Pediatrics; Neisseria meningitidis; Antibody; Biology; Immune system; Internal medicine","score_opus":0.027718704514698975,"score_gpt":0.3453773358609035,"score_spread":0.31765863134620453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164154937","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00002649321,0.99594563,0.00068436714,0.00014528274,0.00067617523,0.0022965297,0.00018264265,0.000020691776,0.00002218635],"genre_scores_gemma":[0.00034958837,0.9977216,0.000048993476,0.000049271715,0.00011894172,0.0009118432,0.0006565916,0.00003238494,0.000110745365],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978277,0.0003237309,0.0013697603,0.00023973256,0.000023021785,0.00021606854],"domain_scores_gemma":[0.99770343,0.0007178947,0.00084898295,0.00042127084,0.00029654545,0.000011844752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004515211,0.0003702566,0.0020753774,0.00013339479,0.00010088724,0.000017145812,0.00035986368,0.00021952724,0.00021008641],"category_scores_gemma":[0.0001946874,0.00021028698,0.00047416202,0.00032018617,0.00006508366,0.00011972646,0.000054216573,0.00014613768,0.00000770439],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025179572,0.00041410595,0.0003027656,0.25943303,0.001298839,7.9893925e-7,0.00014326716,0.000005614243,0.00034813993,0.0067884224,0.018614274,0.71239895],"study_design_scores_gemma":[0.0005823063,0.00005316203,0.00015595123,0.042443555,0.00058024283,0.000006506373,0.00001960888,0.0000010253409,0.000019016981,0.000020188148,0.95592254,0.00019589231],"about_ca_topic_score_codex":0.00027569052,"about_ca_topic_score_gemma":0.000059967384,"teacher_disagreement_score":0.93730825,"about_ca_system_score_codex":0.00003029787,"about_ca_system_score_gemma":0.0003942689,"threshold_uncertainty_score":0.8575254},"labels":[],"label_agreement":null},{"id":"W2165021044","doi":"10.1086/510913","title":"<i>Bordetella pertussis</i>Binds Human C1 Esterase Inhibitor during the Virulent Phase, to Evade Complement‐Mediated Killing","year":2007,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bordetella pertussis; Whooping cough; Bordetella; Microbiology; Virulence; Pertussis toxin; Biology; Complement system; Virology; Immunology; Antibody; Bacteria; Receptor; G protein; Genetics; Gene; Vaccination","score_opus":0.011851473955383206,"score_gpt":0.2879198608699334,"score_spread":0.27606838691455016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165021044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960937,0.0011807916,0.0002518067,0.0003868014,0.0016045987,0.00026698617,0.000053052125,0.000050472794,0.00011177091],"genre_scores_gemma":[0.9987503,0.00014504229,0.0000032976518,0.0003194924,0.00063297903,0.0000060611105,0.000016802658,0.000022820534,0.00010315597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984737,0.00027961124,0.00067085907,0.00012561536,0.00006270587,0.0003875023],"domain_scores_gemma":[0.9985747,0.000438009,0.00040357368,0.00025784347,0.00023206689,0.00009380822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068208395,0.00021743258,0.00029651966,0.00021842272,0.0010347975,0.000061183084,0.0002711459,0.00008068668,0.00056498835],"category_scores_gemma":[0.00014249544,0.00011905569,0.00019568423,0.0002751951,0.0001081406,0.00013419555,0.00010145202,0.00036635663,0.000059556874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008257719,0.00086691085,0.028183455,0.00002038898,0.000509239,0.000009107881,0.0008274696,0.00011271763,0.9644714,0.000031896507,0.0024827877,0.0016588853],"study_design_scores_gemma":[0.027145335,0.0067629465,0.34540632,0.0006438828,0.002264771,0.0033185612,0.004205915,0.000014165956,0.46728292,0.00025205803,0.14132337,0.0013797331],"about_ca_topic_score_codex":0.00011549431,"about_ca_topic_score_gemma":0.00016986266,"teacher_disagreement_score":0.49718845,"about_ca_system_score_codex":0.00010457853,"about_ca_system_score_gemma":0.000050084862,"threshold_uncertainty_score":0.795893},"labels":[],"label_agreement":null},{"id":"W2165249998","doi":"10.1542/peds.114.1.e96","title":"Azithromycin Is as Effective as and Better Tolerated Than Erythromycin Estolate for the Treatment of Pertussis","year":2004,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre hospitalier de l'Université Laval; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Pfizer Canada; Pfizer","keywords":"Medicine; Azithromycin; Erythromycin; Bordetella pertussis; Internal medicine; Randomized controlled trial; Gastroenterology; Antibiotics; Pediatrics","score_opus":0.009800280987125825,"score_gpt":0.25437535253479815,"score_spread":0.24457507154767233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165249998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99262017,0.004372193,0.0001049831,0.0014637043,0.0006396752,0.00062853546,0.00007006288,0.000028032206,0.00007264311],"genre_scores_gemma":[0.9964124,0.0027092223,0.00006856879,0.000114917675,0.00016747529,0.00011550817,0.00003121084,0.0000145799,0.00036609705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993883,0.00004073374,0.0001736689,0.00019804979,0.000012068926,0.00018722042],"domain_scores_gemma":[0.99928564,0.00035970454,0.00009041692,0.0001674041,0.000079942234,0.000016892409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006589938,0.00015584983,0.00023865588,0.00006937988,0.00022643174,0.000017278262,0.000056760826,0.00016340589,0.00013582609],"category_scores_gemma":[0.000041509753,0.0000953376,0.00010093772,0.00014712468,0.00006609307,0.000052940293,0.000018113615,0.000064701,0.00006716526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002970792,0.0044655255,0.1417572,0.0003076595,0.0035356306,0.000010559246,0.03211011,0.000112839916,0.5803382,0.0025459034,0.0094924765,0.22235312],"study_design_scores_gemma":[0.016722439,0.011980906,0.29405662,0.000037882895,0.0021454948,0.00028755693,0.00072290504,0.000013106093,0.5218957,0.00320648,0.14812595,0.00080493663],"about_ca_topic_score_codex":0.0011348443,"about_ca_topic_score_gemma":0.00005444478,"teacher_disagreement_score":0.22154817,"about_ca_system_score_codex":0.000039340677,"about_ca_system_score_gemma":0.00004533841,"threshold_uncertainty_score":0.38877544},"labels":[],"label_agreement":null},{"id":"W2166015022","doi":"10.1128/iai.00494-07","title":"Construction and Characterization of Single-Chain Variable Fragment Antibodies Directed against the <i>Bordetella pertussis</i> Surface Adhesins Filamentous Hemagglutinin and Pertactin","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Filamentous haemagglutinin adhesin; Bordetella pertussis; Biology; Biopanning; Pertactin; Phage display; Hemagglutinin (influenza); Molecular biology; Antibody; Peptide library; Microbiology; Virology; Peptide sequence; Pertussis toxin; Biochemistry; Gene; Genetics; G protein; Bacteria; Receptor","score_opus":0.011762863389553888,"score_gpt":0.22421417618547165,"score_spread":0.21245131279591778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166015022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975854,0.00047061595,0.00039026252,0.00008686,0.0006238732,0.00021276672,0.000024221865,0.00007474956,0.0005312206],"genre_scores_gemma":[0.9978918,0.001638783,0.00009091446,0.00005433467,0.000027054524,0.0000029881637,0.00008089452,0.000009807575,0.00020342896],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99912214,0.0002198744,0.00029476517,0.0001682023,0.000018586617,0.00017642544],"domain_scores_gemma":[0.99932647,0.00020131441,0.00019453511,0.00014151412,0.00011408069,0.000022093212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045126447,0.00015636042,0.0002218365,0.000082787396,0.0005737388,0.000046637135,0.000029956558,0.00016744403,0.00006746695],"category_scores_gemma":[0.000090111535,0.0001194358,0.00002737872,0.00016993083,0.00026418173,0.0001501113,0.00006549944,0.00019890726,0.0000018179514],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010512877,0.00011768673,0.033507112,0.000029360113,0.00007128126,1.0723009e-7,0.0005324701,9.1729424e-7,0.9511193,0.00015530674,0.000018990304,0.014342343],"study_design_scores_gemma":[0.0009947349,0.00030872494,0.51454616,0.00007576654,0.00006881922,0.0001622758,0.0006226486,0.00002969672,0.46273997,0.000029558458,0.02021612,0.00020554745],"about_ca_topic_score_codex":0.001081958,"about_ca_topic_score_gemma":0.000120080615,"teacher_disagreement_score":0.48837933,"about_ca_system_score_codex":0.000021407766,"about_ca_system_score_gemma":0.000016242067,"threshold_uncertainty_score":0.48704505},"labels":[],"label_agreement":null},{"id":"W2166072787","doi":"10.1155/2002/529678","title":"Patterns of Susceptibility in an Outbreak of <i>Bordetella pertussis</i>: Evidence from a Community‐Based Study","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Outbreak; Vaccination; Epidemiology; Bordetella pertussis; Pediatrics; Whooping cough; Incidence (geometry); Medical record; Logistic regression; Public health; Pertussis vaccine; Environmental health; Demography; Immunization; Immunology; Surgery; Virology; Internal medicine","score_opus":0.022618239527488135,"score_gpt":0.2612241637373294,"score_spread":0.23860592420984122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166072787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962084,0.0025478571,0.000022949385,0.00015997559,0.00058307574,0.00015696693,0.0003070536,0.000005252488,0.000008422707],"genre_scores_gemma":[0.9996087,0.00015873433,0.0000035460234,0.00013834682,0.000043605873,0.000003225019,0.000029136805,0.000008492338,0.0000061930737],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977304,0.0011491486,0.00069694826,0.00015372611,0.000018996085,0.00025080264],"domain_scores_gemma":[0.99839455,0.0005618355,0.00031125676,0.0002556879,0.00022541841,0.00025123253],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043680082,0.0001544448,0.0005879895,0.00030738753,0.000115536954,0.0000092611435,0.00024651576,0.0002491845,0.0023063973],"category_scores_gemma":[0.00067535834,0.00012358003,0.000114955714,0.00013413581,0.00028126664,0.0000908887,0.00003438433,0.00047832486,0.000002732617],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084319465,0.0009147339,0.9335438,0.000039445087,0.00010172694,0.000017011356,0.000943751,0.000003560054,0.060517155,0.0000035955713,0.000093691175,0.003737206],"study_design_scores_gemma":[0.0033544821,0.0037648794,0.988162,0.00041612596,0.00017149982,0.00020642788,0.0012785975,0.0000063406806,0.0016118598,0.00003710297,0.0008135511,0.00017714193],"about_ca_topic_score_codex":0.07813061,"about_ca_topic_score_gemma":0.25838146,"teacher_disagreement_score":0.18025084,"about_ca_system_score_codex":0.00005723314,"about_ca_system_score_gemma":0.00036765545,"threshold_uncertainty_score":0.9986056},"labels":[],"label_agreement":null},{"id":"W2166134351","doi":"10.1139/cjm-2014-0763","title":"Relationship between clinical site of isolation and ability to form biofilms in vitro in nontypeable <i>Haemophilus influenzae</i>","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"University of Tasmania","keywords":"Haemophilus influenzae; Microbiology; Biofilm; Otitis; Haemophilus; Carriage; Biology; Pasteurellaceae; Cystic fibrosis; Pathogen; Respiratory tract; Respiratory tract infections; Bacteria; Respiratory system; Medicine; Antibiotics; Pathology","score_opus":0.05184415124409114,"score_gpt":0.29456678794729896,"score_spread":0.24272263670320782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166134351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979066,0.0007249294,0.000018648014,0.0004472042,0.00062172324,0.00013447767,0.00009406215,0.000002233607,0.000050100454],"genre_scores_gemma":[0.99954295,0.0000064808214,0.0002146651,0.00010376796,0.000055745048,0.0000012950077,0.000042499392,0.000006139888,0.000026449477],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985066,0.00029521913,0.0008133672,0.0001358614,0.000005384652,0.00024358956],"domain_scores_gemma":[0.9990892,0.00028284194,0.00023332298,0.00012050027,0.00014708126,0.0001270654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012200895,0.00009738226,0.00041751278,0.00048046038,0.000037796824,0.000006537524,0.000098271266,0.0003531766,0.000031568026],"category_scores_gemma":[0.0005988523,0.000089263536,0.00005317307,0.00021239766,0.00013796538,0.00010784429,0.000022306307,0.0003693143,0.000027003089],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016364614,0.000016384163,0.7861212,0.0000061098117,0.00001052629,0.00000190513,0.00031476116,0.00000851751,0.21246013,0.000028205975,0.0004625,0.0004061285],"study_design_scores_gemma":[0.0019745678,0.00046177322,0.97892153,0.000031933185,0.000019456602,0.00018879706,0.000072135845,5.595534e-7,0.0068252767,0.0002787083,0.011116044,0.0001091985],"about_ca_topic_score_codex":0.007457745,"about_ca_topic_score_gemma":0.04289804,"teacher_disagreement_score":0.20563485,"about_ca_system_score_codex":0.00011254036,"about_ca_system_score_gemma":0.0004651626,"threshold_uncertainty_score":0.9991517},"labels":[],"label_agreement":null},{"id":"W2166179915","doi":"10.1093/gbe/evt116","title":"Homologous Recombination Drives Both Sequence Diversity and Gene Content Variation in Neisseria meningitidis","year":2013,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Mount Sinai Hospital; University of Toronto; Public Health Ontario; Toronto Public Health","funders":"Wayne State University; Sanofi","keywords":"Biology; Homologous recombination; Genetics; Antigenic variation; Recombination; Neisseria meningitidis; Gene; Genome; Neisseria; Ectopic recombination; Genetic recombination; Bacteria","score_opus":0.024738506276221987,"score_gpt":0.22396619638363155,"score_spread":0.19922769010740957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166179915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711204,0.001383295,0.000548958,0.00020349903,0.00044987974,0.00021139899,0.000013447541,0.00003151862,0.000045987475],"genre_scores_gemma":[0.9992911,0.0003089685,0.00007716815,0.000021392943,0.000022203196,0.000024983434,0.0000991593,0.0000032049504,0.00015177808],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993041,0.00014792162,0.00015205867,0.00022414033,0.000004057423,0.00016769774],"domain_scores_gemma":[0.9997544,0.000034981418,0.00007345622,0.00007389782,0.00004759267,0.00001566287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015345136,0.00009555575,0.00014541858,0.000090009155,0.00044820062,0.000009453135,0.000043658405,0.00023169465,0.00011540955],"category_scores_gemma":[0.000030368341,0.00008692952,0.000016420276,0.000072817114,0.00011404378,0.00018097404,0.00014959609,0.00009611139,0.000032503624],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026632408,0.000027910059,0.21174444,0.0000036772726,0.000023482638,1.17540424e-7,0.00032449712,9.705583e-7,0.7844425,0.002653996,0.0000086259115,0.00074316777],"study_design_scores_gemma":[0.00064648554,0.00019848003,0.99297833,0.000004375883,0.000013551086,0.000047574656,0.00009050058,0.000020205453,0.0009640594,0.0048152115,0.00012016474,0.00010108506],"about_ca_topic_score_codex":0.0032687301,"about_ca_topic_score_gemma":0.0001147829,"teacher_disagreement_score":0.78347844,"about_ca_system_score_codex":0.000060953244,"about_ca_system_score_gemma":0.000010533719,"threshold_uncertainty_score":0.4941364},"labels":[],"label_agreement":null},{"id":"W2166273848","doi":"10.1128/cvi.00825-13","title":"Neisseria Adhesin A Variation and Revised Nomenclature Scheme","year":2014,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Wellcome Trust","keywords":"Bacterial adhesin; Neisseria meningitidis; Neisseria; Biology; Genetics; Phylogenetic tree; Nomenclature; Allele; Genetic variants; Classification scheme; Gene; Computational biology; Microbiology; Virulence; Genotype; Taxonomy (biology); Bacteria","score_opus":0.017176865913159048,"score_gpt":0.29045811587956055,"score_spread":0.2732812499664015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166273848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931765,0.0027898655,0.00018246405,0.0019243995,0.0014379995,0.00015766194,0.000004548619,0.00008185518,0.00024468114],"genre_scores_gemma":[0.9967307,0.0014231533,0.00029696253,0.00033561836,0.00024163561,0.000015702293,0.000043681666,0.000014440733,0.0008981085],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984528,0.00035997928,0.0005314008,0.00039329205,0.0000058868163,0.00025664314],"domain_scores_gemma":[0.9990773,0.00038812315,0.00015786482,0.0002717852,0.00007154542,0.00003334207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005141907,0.000185484,0.00048797243,0.00007708091,0.00020215598,0.000026186057,0.000098641474,0.00048052947,0.00043242928],"category_scores_gemma":[0.00048666677,0.0001466922,0.000068988506,0.00010706925,0.000114748276,0.000103842445,0.00013801259,0.0004258482,0.00013645968],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010709206,0.00034128584,0.12017788,0.000046234745,0.0004974313,6.469251e-7,0.00016930934,8.532355e-8,0.76917195,0.018921206,0.0030069905,0.08659604],"study_design_scores_gemma":[0.0033775978,0.00076368044,0.8425187,0.000024765324,0.000058678103,0.00010360565,0.0000140080865,0.000016742695,0.0006870735,0.0015665236,0.15067947,0.00018920327],"about_ca_topic_score_codex":0.00006342971,"about_ca_topic_score_gemma":0.000014234386,"teacher_disagreement_score":0.7684849,"about_ca_system_score_codex":0.0000051084344,"about_ca_system_score_gemma":0.00001807708,"threshold_uncertainty_score":0.5981934},"labels":[],"label_agreement":null},{"id":"W2166663556","doi":"10.4049/jimmunol.177.1.501","title":"The Meningococcal Vaccine Candidate GNA1870 Binds the Complement Regulatory Protein Factor H and Enhances Serum Resistance","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":392,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Sanofi","keywords":"Neisseria meningitidis; Factor H; Biology; Mutant; Meningococcal vaccine; Binding protein; Microbiology; Plasma protein binding; Complement system; Bacteria; Chemistry; Molecular biology; Gene; Biochemistry; Antibody; Genetics","score_opus":0.007543307297023139,"score_gpt":0.22814109150540401,"score_spread":0.2205977842083809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166663556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9753028,0.01657838,0.000037920807,0.0069152233,0.0007785439,0.00023695115,0.000015196371,0.000012346913,0.00012263763],"genre_scores_gemma":[0.9967096,0.0007256625,0.000012624701,0.00004344693,0.00015059486,0.0000105778945,0.0000030763622,0.000010515996,0.0023339055],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983923,0.0006322665,0.0005376849,0.000097313074,0.000028983008,0.00031149102],"domain_scores_gemma":[0.99866,0.00033362798,0.0005426633,0.00031042643,0.00014341521,0.000009833369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084682,0.00015907436,0.0002635829,0.00005454226,0.0010247213,0.00003751374,0.0004151586,0.00010899799,0.0001896373],"category_scores_gemma":[0.00004120055,0.00006668892,0.00006955566,0.0001071569,0.00032750738,0.00008318189,0.00011952283,0.0004615054,0.000014556577],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008005337,0.00003746873,0.0006585326,0.0000039270435,0.00032044406,8.3798113e-7,0.00023872675,0.00000169964,0.9898056,0.0025319923,0.003880953,0.0017192861],"study_design_scores_gemma":[0.0022227454,0.00062934164,0.26252425,0.000064935266,0.00011244931,0.0005843425,0.0007687259,8.7047016e-7,0.3550828,0.0016922996,0.37614027,0.00017696992],"about_ca_topic_score_codex":0.00029217394,"about_ca_topic_score_gemma":0.0014564871,"teacher_disagreement_score":0.63472277,"about_ca_system_score_codex":0.000038028305,"about_ca_system_score_gemma":0.00005875602,"threshold_uncertainty_score":0.78814316},"labels":[],"label_agreement":null},{"id":"W2167428512","doi":"10.1128/jb.00257-06","title":"Membrane Vesicles: an Overlooked Component of the Matrices of Biofilms","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":592,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Advanced Foods and Materials Network","keywords":"Biofilm; Biology; Bacteria; Matrix (chemical analysis); Microbiology; Pseudomonas aeruginosa; Isolation (microbiology); Vesicle; Bacterial outer membrane; Biophysics; Membrane; Chemistry; Biochemistry; Genetics; Escherichia coli; Gene; Chromatography","score_opus":0.010445796112656593,"score_gpt":0.23062063417257003,"score_spread":0.22017483805991345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167428512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974702,0.00055133447,0.0000095233945,0.00018956776,0.0015615174,0.00006645331,0.0000247927,0.000005053,0.00012158083],"genre_scores_gemma":[0.999537,0.00009723242,0.00008812641,0.000018125756,0.00014866499,7.572489e-7,0.000009325513,0.0000070227843,0.000093771945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876696,0.00028169478,0.0007127247,0.00008138685,0.000017407481,0.00013982895],"domain_scores_gemma":[0.9985582,0.000098866054,0.0009727259,0.00018981549,0.00016849331,0.000011892605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025757874,0.00010329443,0.0004444829,0.00012724794,0.00005697566,0.000004536578,0.0002496815,0.00017502088,0.0003880717],"category_scores_gemma":[0.000024414116,0.000062262356,0.00017743393,0.0001138504,0.00019658754,0.00010350082,0.000047930047,0.00017185025,0.0000056745657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025922788,0.00019324105,0.013567513,0.000019217689,0.000103512095,6.422453e-7,0.00005732009,0.000016308944,0.9845156,0.0005160363,0.00024448943,0.0005068544],"study_design_scores_gemma":[0.0010149749,0.00064154144,0.38409826,0.000037911766,0.00007072801,0.00038806343,0.00006664555,0.0000010589636,0.6050378,0.000107017884,0.008470985,0.00006499677],"about_ca_topic_score_codex":0.00040206505,"about_ca_topic_score_gemma":0.00003403394,"teacher_disagreement_score":0.3794778,"about_ca_system_score_codex":0.000013809996,"about_ca_system_score_gemma":0.000052192565,"threshold_uncertainty_score":0.4249113},"labels":[],"label_agreement":null},{"id":"W2167602597","doi":"10.2217/fmb.15.91","title":"The Multicomponent Meningococcal Serogroup B Vaccine (4CMenB): Origin, Composition, Health Impact and Unknown Aspects","year":2015,"lang":"en","type":"review","venue":"Future Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal vaccine; Immunogenicity; Neisseria meningitidis; Meningococcal disease; Medicine; Carriage; Immunization; Virology; Immunology; Antibody; Biology; Bacteria","score_opus":0.02630535176778883,"score_gpt":0.3364184530971211,"score_spread":0.3101131013293323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167602597","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017042599,0.9892833,0.000012860808,0.0007791998,0.006222853,0.0012932515,0.0005051989,0.00014742244,0.000051623585],"genre_scores_gemma":[0.00028497636,0.9929042,0.000051713025,0.00009849599,0.0012558437,0.000119034514,0.0048686517,0.00007378055,0.00034331428],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956465,0.0016468732,0.001019748,0.00075410755,0.000014528575,0.00091827847],"domain_scores_gemma":[0.99797857,0.00035600623,0.00073993165,0.0006266344,0.00018016943,0.00011869942],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008720406,0.0008578703,0.0024413166,0.00021142019,0.00091227284,0.000084607374,0.00044506442,0.0011303423,0.00020369756],"category_scores_gemma":[0.000019893849,0.00047591646,0.0004550314,0.0002748575,0.00020248731,0.00006496514,0.00031286897,0.00113194,0.00038637794],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002539668,0.000363,0.0000368071,0.001670654,0.002913351,0.0000071986146,0.00025737536,5.4215354e-7,0.014581889,0.002231368,0.14033307,0.8373508],"study_design_scores_gemma":[0.0011298647,0.00054784917,0.000035351823,0.00061327446,0.00033308813,0.0034956366,0.000028539533,1.9719062e-7,0.000025050982,0.000022531807,0.99330986,0.0004587897],"about_ca_topic_score_codex":0.00020483317,"about_ca_topic_score_gemma":0.00023565195,"teacher_disagreement_score":0.85297674,"about_ca_system_score_codex":0.00038975055,"about_ca_system_score_gemma":0.000486989,"threshold_uncertainty_score":0.9997693},"labels":[],"label_agreement":null},{"id":"W2167996482","doi":"10.1128/iai.00895-08","title":"Pertussis Toxin Inhibits Early Chemokine Production To Delay Neutrophil Recruitment in Response to<i>Bordetella pertussis</i>Respiratory Tract Infection in Mice","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Simon Fraser University","keywords":"Bordetella pertussis; Pertussis toxin; Biology; Microbiology; Chemokine; Respiratory tract; Immunology; Whooping cough; Respiratory tract infections; Respiratory system; Virology; Bacteria; Inflammation; G protein; Vaccination; Receptor","score_opus":0.044344293017642554,"score_gpt":0.2822678428399351,"score_spread":0.23792354982229255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167996482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99615353,0.00027756332,0.000026057558,0.0008350173,0.0014295226,0.0010175814,0.0000065897266,0.000116267176,0.00013786672],"genre_scores_gemma":[0.99808115,0.0006686233,0.000017048287,0.00036994796,0.000095720774,0.00027676162,0.000016873339,0.000026826187,0.0004470502],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99762106,0.0009401791,0.00054690737,0.0004660106,0.00003774277,0.00038811605],"domain_scores_gemma":[0.99923766,0.0001231818,0.000112518144,0.00031566602,0.00013663448,0.00007432464],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00089651055,0.00029581905,0.00037384976,0.0009538822,0.00044298457,0.00003494553,0.00007179505,0.00032647164,0.00015039188],"category_scores_gemma":[0.00050811673,0.00028715533,0.00008284304,0.0010692949,0.000074185315,0.00036677107,0.00009973272,0.0006168796,0.00014495495],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014580169,0.0007274044,0.18877043,0.000013177051,0.000023357286,0.0000026878458,0.0015753588,0.000099888166,0.7991766,0.000004066969,0.0002819608,0.007867075],"study_design_scores_gemma":[0.0013012887,0.00095761265,0.8168758,0.00006931981,0.000012403768,0.00018187858,0.00003095664,0.0000018329836,0.1252564,0.0000070420483,0.055034414,0.00027105815],"about_ca_topic_score_codex":0.010353915,"about_ca_topic_score_gemma":0.003145031,"teacher_disagreement_score":0.67392015,"about_ca_system_score_codex":0.0002774758,"about_ca_system_score_gemma":0.00007759897,"threshold_uncertainty_score":0.99995804},"labels":[],"label_agreement":null},{"id":"W2168250898","doi":"10.1017/s0950268899004471","title":"Genetic characterization of a new variant within the ET-37 complex of <i>Neisseria meningitidis</i> associated with outbreaks in various parts of the world","year":2000,"lang":"en","type":"article","venue":"Epidemiology and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of New South Wales; World Health Organization","keywords":"Neisseria meningitidis; Outbreak; Genetics; Neisseriaceae; Biology; Neisseria; Microbiology; Virology; Bacteria","score_opus":0.025796403551648615,"score_gpt":0.26282315648344173,"score_spread":0.23702675293179312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168250898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998332,0.00010128882,0.00021894104,0.00047333585,0.00027261386,0.00023120444,0.000015439924,0.000012650826,0.000342524],"genre_scores_gemma":[0.9992315,0.00012327434,0.000030386256,0.00014145017,0.000017802337,0.000012530743,0.000049695107,0.000006997799,0.0003863401],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980765,0.0010482506,0.00057471043,0.00015024701,0.000009324117,0.00014096878],"domain_scores_gemma":[0.99886686,0.00037956753,0.0005230064,0.000171201,0.00004874105,0.000010626829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082216854,0.00011572923,0.00040544194,0.00006191286,0.000095759875,0.0000021765604,0.000062595376,0.00016511534,0.00032170914],"category_scores_gemma":[0.00021651258,0.000066253146,0.000052197094,0.00029201017,0.0002113322,0.000062482206,0.000023383018,0.00019388761,0.0000019837712],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003299396,0.00018771774,0.60660017,0.00001957499,0.0002044631,1.8247881e-7,0.0006913986,0.0005092093,0.38553822,0.0035778661,0.00019258697,0.002148694],"study_design_scores_gemma":[0.0007341853,0.00023688686,0.9884908,0.00008205168,0.000065062406,0.000052609663,0.000008028387,0.000064331594,0.008227932,0.00080195133,0.001169481,0.00006665632],"about_ca_topic_score_codex":0.0024689531,"about_ca_topic_score_gemma":0.0031736286,"teacher_disagreement_score":0.38189068,"about_ca_system_score_codex":0.000011442014,"about_ca_system_score_gemma":0.000048914728,"threshold_uncertainty_score":0.3732335},"labels":[],"label_agreement":null},{"id":"W2168635341","doi":"10.1093/infdis/jit488","title":"Mouse and Pig Models for Studies of Natural and Vaccine-Induced Immunity to Bordetella pertussis","year":2014,"lang":"en","type":"review","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Bordetella pertussis; Immunity; Immunology; Whooping cough; Pertussis vaccine; Acquired immune system; Immunization; Adjuvant; Vaccination; Innate immune system; Medicine; Immune system; Virology; Biology; Bacteria","score_opus":0.041815091594509184,"score_gpt":0.33790726136900245,"score_spread":0.29609216977449326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168635341","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20520021,0.79360324,0.00002746882,0.000035426725,0.0006601758,0.00038963524,0.00006538152,0.000012036136,0.0000064233327],"genre_scores_gemma":[0.16138802,0.83834,0.0000059698637,0.000024601462,0.00012741776,0.000018005121,0.000007882049,0.000023173237,0.00006492418],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984787,0.0004983564,0.0006946485,0.0001248126,0.000021300006,0.00018215655],"domain_scores_gemma":[0.99725354,0.0012925033,0.00076828065,0.00022494707,0.0004159761,0.000044744706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004526711,0.00030295958,0.0016114917,0.00025415822,0.00029352817,0.00002207528,0.00017072252,0.00016429565,0.000010473613],"category_scores_gemma":[0.0005642176,0.00016277986,0.0003374087,0.00012427696,0.00007249863,0.000100857964,0.0001429501,0.00031445947,0.000001690869],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011015284,0.00072529924,0.00023521303,0.014972055,0.009898114,0.0000011558761,0.0012669374,0.000030695148,0.0068015424,0.000297461,0.00458603,0.96008396],"study_design_scores_gemma":[0.009017507,0.012202522,0.0008842092,0.018393753,0.033901364,0.0048020077,0.0016339275,0.000018676405,0.0016598434,0.0027250166,0.9126627,0.0020985068],"about_ca_topic_score_codex":0.00006096086,"about_ca_topic_score_gemma":0.00003684348,"teacher_disagreement_score":0.95798546,"about_ca_system_score_codex":0.000037972593,"about_ca_system_score_gemma":0.00008774718,"threshold_uncertainty_score":0.663797},"labels":[],"label_agreement":null},{"id":"W2169630907","doi":"10.1542/peds.2010-0796","title":"Use of Models to Identify Cost-effective Interventions: Pertussis Vaccination for Pediatric Health Care Workers","year":2011,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Public Health Agency of Canada","funders":"Sanofi","keywords":"Medicine; Vaccination; Health care; Diphtheria; Cost effectiveness; Context (archaeology); Psychological intervention; Booster (rocketry); Booster dose; Pertussis vaccine; Immunization; Environmental health; Pediatrics; Nursing; Immunology","score_opus":0.12129682028343118,"score_gpt":0.3550376235590925,"score_spread":0.23374080327566132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169630907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9346637,0.0063345185,0.050885137,0.00012926434,0.0031255574,0.0041578324,0.0004981357,0.00011205614,0.000093791976],"genre_scores_gemma":[0.99639755,0.0006151488,0.0016114648,0.000048327798,0.00016964409,0.00073785725,0.00018078208,0.000023383363,0.00021581948],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989031,0.00012914358,0.0004339931,0.00025350304,0.000019483483,0.0002607776],"domain_scores_gemma":[0.998878,0.00021455996,0.00026360026,0.00020314769,0.0003998218,0.00004088366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022535151,0.00014423525,0.00027278202,0.00043925043,0.00017271913,0.000018259338,0.00012032792,0.00016535941,0.00013672159],"category_scores_gemma":[0.00018332512,0.000136483,0.00023673278,0.0004470931,0.000009555472,0.00027928827,0.00006907093,0.00011285066,0.000036049692],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027508566,0.0029580477,0.43744972,0.004555239,0.000718793,0.0000011946892,0.037784524,0.0007492359,0.0041273357,0.005103735,0.13087316,0.37292814],"study_design_scores_gemma":[0.005757818,0.0046377215,0.9491464,0.00013490698,0.001570148,0.000022159262,0.0047215717,0.00006854106,0.006248985,0.0012346926,0.025182137,0.0012749466],"about_ca_topic_score_codex":0.0007140507,"about_ca_topic_score_gemma":0.00019883072,"teacher_disagreement_score":0.51169664,"about_ca_system_score_codex":0.00010100364,"about_ca_system_score_gemma":0.00007347961,"threshold_uncertainty_score":0.5565615},"labels":[],"label_agreement":null},{"id":"W2169845705","doi":"10.1128/cdli.12.1.152-156.2005","title":"Serological Specificities of Murine Hybridoma Monoclonal Antibodies against<i>Neisseria meningitidis</i>Serogroups B, C, Y, and W135 and Evaluation of Their Usefulness as Serogrouping Reagents by Indirect Whole-Cell Enzyme-Linked Immunosorbent Assay","year":2005,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Health Canada","keywords":"Neisseria meningitidis; Monoclonal antibody; Microbiology; Antiserum; Serology; Virology; Biology; Serotype; Antigen; Antibody; Agglutination (biology); Neisseriaceae; Neisseria; Monoclonal; Bacteria; Immunology; Antibiotics","score_opus":0.04598618385034826,"score_gpt":0.30446112743776943,"score_spread":0.2584749435874212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169845705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750408,0.023189645,0.000016488953,0.00042541866,0.0006072916,0.0004448942,0.00009572792,0.000056964876,0.00012276313],"genre_scores_gemma":[0.9904276,0.008797409,0.00008681542,0.00006840226,0.000107002816,0.000038507562,0.0002687084,0.000026481299,0.00017903943],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9964227,0.0011149641,0.0013831621,0.000612952,0.000048187092,0.0004180131],"domain_scores_gemma":[0.9978348,0.0008535723,0.00061218155,0.00034670625,0.00030034877,0.000052397125],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017799007,0.00040448958,0.0011783972,0.00017316811,0.00023838675,0.000027147522,0.00019905795,0.0005195242,0.0002164221],"category_scores_gemma":[0.0002632186,0.0003199534,0.00015218335,0.00014273067,0.000541817,0.00022210933,0.00038424646,0.00049870845,0.000012117984],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015136008,0.00092222996,0.112058565,0.00007242776,0.0008621403,0.0000012070499,0.00041890968,0.0000053312006,0.81000555,0.0001365747,0.00041660073,0.07358688],"study_design_scores_gemma":[0.009827195,0.0019196497,0.72740215,0.00013037206,0.00037006085,0.00020619856,0.0009143488,0.00012207252,0.25161508,0.00041277046,0.0066079716,0.00047212426],"about_ca_topic_score_codex":0.000096023265,"about_ca_topic_score_gemma":0.00003225374,"teacher_disagreement_score":0.61534363,"about_ca_system_score_codex":0.000018212822,"about_ca_system_score_gemma":0.00004765191,"threshold_uncertainty_score":0.99992526},"labels":[],"label_agreement":null},{"id":"W2171162480","doi":"10.1128/iai.05702-11","title":"Defining the Roles of Human Carcinoembryonic Antigen-Related Cellular Adhesion Molecules during Neutrophil Responses to Neisseria gonorrhoeae","year":2011,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Neisseria gonorrhoeae; Neisseria; Microbiology; Cell adhesion molecule; Immunology; Bacteria","score_opus":0.01730747942860192,"score_gpt":0.24222870528368884,"score_spread":0.22492122585508692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171162480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729824,0.0013961238,0.000010764315,0.000027188471,0.00046525535,0.00016206838,0.000007018898,0.00007204362,0.00056132296],"genre_scores_gemma":[0.99948007,0.00022681881,0.000006141989,0.000015714515,0.0000118950975,0.000012929815,0.000018225584,0.000013972384,0.0002142118],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989387,0.00040657632,0.000299341,0.00015873526,0.0000072039593,0.00018947705],"domain_scores_gemma":[0.99942046,0.000050334154,0.00012966347,0.00029496214,0.00008244309,0.00002213783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024982775,0.0001505701,0.00020305984,0.00017101751,0.0007662588,0.000018232065,0.00010027958,0.00015881236,0.00033216833],"category_scores_gemma":[0.000058010963,0.000115391704,0.00007922143,0.00021161514,0.00010631584,0.00010342979,0.00012583559,0.00026579,0.00005469251],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016689634,0.000086212385,0.07919658,0.0000124666785,0.000065058186,1.7111165e-7,0.0011376616,0.0000020184675,0.9175775,0.0012214583,0.000013270274,0.00052067806],"study_design_scores_gemma":[0.0003280971,0.00024580225,0.5918747,0.000024422345,0.000022831573,0.000025581989,0.00017764777,6.4434784e-7,0.40666628,0.000060717575,0.0004897423,0.00008349306],"about_ca_topic_score_codex":0.0033184092,"about_ca_topic_score_gemma":0.00029871985,"teacher_disagreement_score":0.51267815,"about_ca_system_score_codex":0.000016557542,"about_ca_system_score_gemma":0.000020593332,"threshold_uncertainty_score":0.5893521},"labels":[],"label_agreement":null},{"id":"W2171691074","doi":"10.4049/jimmunol.1002621","title":"Immune Evasion of <i>Moraxella catarrhalis</i> Involves Ubiquitous Surface Protein A-Dependent C3d Binding","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie – Hans-Knöll-Institut","keywords":"Moraxella catarrhalis; Complement system; Microbiology; Alternative complement pathway; Moraxella (Branhamella) catarrhalis; Biology; Antibody opsonization; Immunology; Immune system; Classical complement pathway; Phagocytosis; Opsonin; Streptococcus pneumoniae","score_opus":0.02632148503064092,"score_gpt":0.2313487533759102,"score_spread":0.2050272683452693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171691074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98657703,0.010645486,0.00007758407,0.00020435572,0.0019382141,0.00020314779,0.0000127341455,0.000018085924,0.00032334065],"genre_scores_gemma":[0.99768996,0.0011639068,0.000109181994,0.000016933722,0.000056101137,0.000002242652,0.000007100488,0.000019573657,0.0009349751],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805874,0.0006335052,0.00084996276,0.000112869966,0.000033308595,0.00031159286],"domain_scores_gemma":[0.99816537,0.00013338924,0.0009932533,0.0003880782,0.00030331925,0.000016587881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001110123,0.00019354661,0.0005151794,0.00016545522,0.00021104308,0.0000073107176,0.00057340314,0.00027138361,0.0005792344],"category_scores_gemma":[0.00009143892,0.00012207952,0.00016872592,0.00017397055,0.00031248038,0.00016329046,0.00018233419,0.0005652902,0.00010189944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011383954,0.00022174967,0.00050306023,0.000014840346,0.0004671681,0.0000037396278,0.0014696133,0.0000049638147,0.99463165,0.00027237003,0.00023367383,0.0010387853],"study_design_scores_gemma":[0.0013216136,0.0012144402,0.0033351935,0.00010708758,0.00013615291,0.0012813315,0.0010686266,2.7972834e-7,0.98813754,0.00022646776,0.003039875,0.00013139719],"about_ca_topic_score_codex":0.0011489847,"about_ca_topic_score_gemma":0.000040243493,"teacher_disagreement_score":0.011112933,"about_ca_system_score_codex":0.000039850216,"about_ca_system_score_gemma":0.00010108375,"threshold_uncertainty_score":0.634221},"labels":[],"label_agreement":null},{"id":"W2171780016","doi":"10.3171/2011.2.peds09500","title":"Neurosurgical management of extraaxial central nervous system infections in children","year":2011,"lang":"en","type":"article","venue":"Journal of Neurosurgery Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Subdural empyema; Etiology; Brain abscess; Empyema; Meningitis; Abscess; Surgery; Mastoiditis; Sinusitis; Pediatrics; Otitis; Internal medicine","score_opus":0.01781246427731082,"score_gpt":0.2161344344264029,"score_spread":0.19832197014909209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171780016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943094,0.00030884912,0.00007659701,0.000014567443,0.0047959946,0.0001165431,0.0000179741,0.00002132705,0.00033871928],"genre_scores_gemma":[0.9989803,0.00067342987,0.00003372972,0.0000091876445,0.0002259453,0.0000024503247,0.000004053122,0.000015025474,0.000055911427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984105,0.00020327776,0.0009149213,0.0001390706,0.000041069903,0.0002911623],"domain_scores_gemma":[0.99903464,0.000092970346,0.0005732377,0.00015282576,0.00010228362,0.000044031924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030463288,0.00014680832,0.0003830479,0.00058331154,0.00006345936,0.000011547499,0.0001536615,0.0001452377,0.00011181521],"category_scores_gemma":[0.000035989284,0.00012610195,0.0002461829,0.00057577365,0.000044006418,0.00015747183,0.000056983838,0.0003631012,0.0000125374645],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002357736,0.00077884406,0.989722,0.00006341111,0.00008436972,0.00008405599,0.00006355908,0.00004499515,0.0058613825,0.00044420335,0.00094799773,0.0016693915],"study_design_scores_gemma":[0.0009327139,0.00030731532,0.9936097,0.000027797543,0.00013791198,0.0027151434,0.000037352107,0.0000012424495,0.0008514246,0.000012470885,0.0012538355,0.00011306244],"about_ca_topic_score_codex":0.00004670847,"about_ca_topic_score_gemma":0.0000018762269,"teacher_disagreement_score":0.005009958,"about_ca_system_score_codex":0.00003270288,"about_ca_system_score_gemma":0.000046009325,"threshold_uncertainty_score":0.5142288},"labels":[],"label_agreement":null},{"id":"W2172033398","doi":"10.1016/s0264-410x(01)00393-0","title":"Recommendations are needed for adolescent and adult pertussis immunisation: rationale and strategies for consideration","year":2001,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":157,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"GlaxoSmithKline","keywords":"Medicine; Vaccination; Disease; Pediatrics; Public health; Vaccination policy; Booster (rocketry); Immunology; Intensive care medicine; Environmental health; Nursing","score_opus":0.07322623274006444,"score_gpt":0.32721542729473985,"score_spread":0.2539891945546754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2172033398","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003661803,0.9919499,0.0016298009,0.0024645734,0.0006737294,0.0021787891,0.0006581771,0.00005388902,0.00002493556],"genre_scores_gemma":[0.00015431554,0.9928512,0.0004508881,0.00014734539,0.00021840495,0.00060121797,0.0046859393,0.000028760787,0.0008619033],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99897027,0.00009450606,0.00047111305,0.00029118164,0.000007625084,0.00016533078],"domain_scores_gemma":[0.9988825,0.00037427395,0.0003160106,0.0001603624,0.00024786318,0.000019030624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012303413,0.0002631566,0.0007068204,0.0001530255,0.0004971948,0.000111574336,0.000049881564,0.0003264932,0.0001987324],"category_scores_gemma":[0.00011660286,0.00021359805,0.00012792989,0.00009334992,0.00001457896,0.00016847378,0.000031235853,0.00013084238,0.000006752628],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016444124,0.0002037764,0.000046196415,0.0066096107,0.0006789618,1.7945632e-7,0.0002084015,6.0349595e-7,0.000509554,0.011726453,0.123890646,0.8559612],"study_design_scores_gemma":[0.0014164379,0.00012780134,0.00006861776,0.0011379304,0.00048445145,0.00010230514,0.0006037212,0.000006058126,0.000017837341,0.00037055014,0.9954358,0.00022853758],"about_ca_topic_score_codex":0.000057654543,"about_ca_topic_score_gemma":0.00017822848,"teacher_disagreement_score":0.87154514,"about_ca_system_score_codex":0.00003186847,"about_ca_system_score_gemma":0.00010868941,"threshold_uncertainty_score":0.8710276},"labels":[],"label_agreement":null},{"id":"W2172569645","doi":"10.5858/2002-126-1209-eoadpc","title":"Evaluation of a Diagnostic Polymerase Chain Reaction Assay for <i>Neisseria meningitidis</i> in North America and Field Experience During an Outbreak","year":2002,"lang":"en","type":"article","venue":"Archives of Pathology & Laboratory Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's & Women's Health Centre of British Columbia; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Neisseria meningitidis; Outbreak; Meningococcal disease; Polymerase chain reaction; Medicine; Case fatality rate; Virology; Microbiology; Context (archaeology); Population; Biology; Bacteria; Genetics; Gene; Environmental health","score_opus":0.018063867404660112,"score_gpt":0.27723660670045985,"score_spread":0.25917273929579976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2172569645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99658513,0.002399607,0.0000985957,0.00020074635,0.00029595467,0.00028081474,0.000046427318,0.000014809551,0.00007790927],"genre_scores_gemma":[0.99923706,0.00041832685,0.00006583276,0.000048211423,0.000045877227,0.00010771301,0.00005561521,0.000008409347,0.00001294506],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99874836,0.00050064386,0.00034144716,0.00022559802,0.000023994291,0.00015997981],"domain_scores_gemma":[0.9986084,0.00089066906,0.00019851375,0.00018892802,0.0000898821,0.00002358744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032216575,0.00011455796,0.00030500608,0.0001942593,0.00006900718,0.000001285307,0.00006846334,0.00007964614,0.00012084955],"category_scores_gemma":[0.0014325738,0.00009998823,0.000021228196,0.00015134978,0.00030974468,0.00009802067,0.000023614137,0.00010488104,0.0000010489309],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012901353,0.00013642904,0.026763598,0.00002648621,0.00002398327,0.000002288525,0.006784242,0.0000044680664,0.95214427,0.00003219179,0.000016711258,0.013936331],"study_design_scores_gemma":[0.007134626,0.0027683168,0.63896424,0.00019498015,0.00027735234,0.00010347161,0.0042358623,0.00027373765,0.34483036,0.0001523849,0.00079391693,0.00027075032],"about_ca_topic_score_codex":0.00013930717,"about_ca_topic_score_gemma":0.00032183292,"teacher_disagreement_score":0.6122006,"about_ca_system_score_codex":0.000009000012,"about_ca_system_score_gemma":0.000024339954,"threshold_uncertainty_score":0.40774018},"labels":[],"label_agreement":null},{"id":"W2175130498","doi":"10.1093/infdis/jiv506","title":"HlyF Produced by Extraintestinal Pathogenic<i>Escherichia coli</i>Is a Virulence Factor That Regulates Outer Membrane Vesicle Biogenesis","year":2015,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Canada Research Chairs; Institut National de la Santé et de la Recherche Médicale; Ministry of Education, Culture, Sports, Science and Technology; Agence Nationale de la Recherche","keywords":"Virulence; Bacterial outer membrane; Escherichia coli; Microbiology; Biology; Virulence factor; Pathogenic Escherichia coli; Bacteria; Enterobacteriaceae; Biogenesis; Pathogenic bacteria; Gene; Genetics","score_opus":0.021722043563371565,"score_gpt":0.24121590020369119,"score_spread":0.21949385664031962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2175130498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927242,0.0050782487,0.00008246678,0.00048800497,0.0011388315,0.00018866333,0.00019482318,0.00006490001,0.000039900155],"genre_scores_gemma":[0.99897623,0.00028647104,0.000015073139,0.00028069943,0.0001939173,0.000008331262,0.00001050607,0.000025160603,0.00020362236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986832,0.00038695594,0.0004052348,0.00016720289,0.00006048219,0.0002969254],"domain_scores_gemma":[0.99861795,0.00018481536,0.00044457288,0.00028660538,0.00035850905,0.000107541724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003279392,0.00023746888,0.0003393845,0.0000955608,0.00024134578,0.00005484585,0.0002727725,0.0001075778,0.00045296596],"category_scores_gemma":[0.0002604559,0.00014909096,0.00019495262,0.0002029371,0.00016384284,0.00026779223,0.000062614636,0.00021414772,0.00009229703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050467346,0.000372975,0.029855166,0.000014821911,0.0002746882,0.0000049270316,0.00046672783,0.000008526952,0.9546016,0.000006652803,0.012641492,0.0012477634],"study_design_scores_gemma":[0.0030675526,0.0013223386,0.057762977,0.0000990594,0.0006296628,0.0015306493,0.0003807498,0.00000599091,0.9223534,0.00023415659,0.012200208,0.00041328484],"about_ca_topic_score_codex":0.00014220508,"about_ca_topic_score_gemma":0.000009183246,"teacher_disagreement_score":0.032248214,"about_ca_system_score_codex":0.00006186927,"about_ca_system_score_gemma":0.00016225145,"threshold_uncertainty_score":0.6079753},"labels":[],"label_agreement":null},{"id":"W2177455682","doi":"10.1385/1-59259-148-5:49","title":"Protein-Polysaccharide Conjugation","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Polysaccharide; Immune system; Bacteria; Microbiology; Population; Bacterial meningitis; Chemistry; Biology; Meningitis; Immunology; Medicine; Biochemistry; Pediatrics; Genetics","score_opus":0.0397807445855727,"score_gpt":0.25721796931926516,"score_spread":0.21743722473369245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2177455682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8821618,0.0016512314,0.00020081057,0.000015188478,0.0009983198,0.00046786387,0.000008382824,0.0001790435,0.11431735],"genre_scores_gemma":[0.973431,0.000008214426,0.00003459718,0.00003096972,0.000036900183,0.000088569795,0.000008654525,0.000011558059,0.02634957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99940044,0.000105096115,0.00015388733,0.00015768636,0.000008103121,0.00017479756],"domain_scores_gemma":[0.9996739,0.00001504203,0.0000614247,0.0001947839,0.000043141543,0.000011727161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000091222515,0.000099351455,0.00011625583,0.00004048544,0.00018867441,0.000024991925,0.00006982115,0.00010852768,0.00057956233],"category_scores_gemma":[0.000025660287,0.00008846043,0.000043224965,0.000009147259,0.00004682698,0.000045692464,0.000019130715,0.00011253419,0.000143942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018910136,0.000030223267,0.000016661439,0.000009714919,0.0000544541,4.7180947e-7,0.0001344162,4.795575e-7,0.8011311,0.1920926,0.0013208115,0.0051901024],"study_design_scores_gemma":[0.00044469855,0.000042796666,0.00014927583,0.000010023711,0.000015539183,0.000013841952,0.000011233514,2.8876374e-7,0.51760304,0.000697811,0.4809162,0.00009522365],"about_ca_topic_score_codex":0.0002489074,"about_ca_topic_score_gemma":0.00003586883,"teacher_disagreement_score":0.4795954,"about_ca_system_score_codex":0.000010594569,"about_ca_system_score_gemma":0.000015109954,"threshold_uncertainty_score":0.63458014},"labels":[],"label_agreement":null},{"id":"W2177925390","doi":"10.1371/journal.pone.0142179","title":"The Epidemiology of Invasive Haemophilus influenzae Non-Serotype B Disease in Ontario, Canada from 2004 to 2013","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; University of Toronto; Public Health Ontario","funders":"","keywords":"Epidemiology; Incidence (geometry); Haemophilus influenzae; Medicine; Serotype; Poisson regression; Population; Disease surveillance; Disease; Pediatrics; Demography; Internal medicine; Environmental health; Immunology; Biology; Antibiotics; Microbiology","score_opus":0.05873659038547499,"score_gpt":0.2416440380789002,"score_spread":0.1829074476934252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2177925390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578553,0.00121376,0.0000023674395,0.0020129199,0.0005074553,0.00029413193,0.00007315298,0.000008823029,0.00010188433],"genre_scores_gemma":[0.99835706,0.000035779205,0.000061246574,0.00044147327,0.00004262732,0.00005319949,0.00008001439,0.000008346452,0.0009202855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990373,0.00017237662,0.00033665466,0.00018147928,0.000017786535,0.00025435622],"domain_scores_gemma":[0.99888206,0.00047016077,0.00010516716,0.00031513663,0.00015081,0.000076675184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019991817,0.00011290102,0.0003418032,0.000044872395,0.00007020696,0.000002893367,0.00018014925,0.00010260194,0.0002934746],"category_scores_gemma":[0.0008798247,0.00008364438,0.000027940434,0.00009046312,0.00005523283,0.000043998676,0.00009526714,0.00020464511,0.00013177723],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000558585,0.0002971042,0.95108443,0.0000069784483,0.00025354192,0.000002443477,0.0002806391,0.00008448743,0.032291878,0.00006813447,0.015008677,0.000063095285],"study_design_scores_gemma":[0.0009202411,0.00015904912,0.97827214,0.000091854556,0.00006372629,7.5283543e-7,0.000055440905,0.0000024673259,0.009532617,0.0008103112,0.009955532,0.00013589668],"about_ca_topic_score_codex":0.9931905,"about_ca_topic_score_gemma":0.99815774,"teacher_disagreement_score":0.027187673,"about_ca_system_score_codex":0.00019435998,"about_ca_system_score_gemma":0.00094277563,"threshold_uncertainty_score":0.3410919},"labels":[],"label_agreement":null},{"id":"W2186297315","doi":"10.1371/journal.ppat.1005290","title":"Utilizing CMP-Sialic Acid Analogs to Unravel Neisseria gonorrhoeae Lipooligosaccharide-Mediated Complement Resistance and Design Novel Therapeutics","year":2015,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Uniformed Services University of the Health Sciences","keywords":"Neisseria gonorrhoeae; Alternative complement pathway; Sialyltransferase; Sialic acid; Classical complement pathway; Microbiology; Neuraminic acid; Chemistry; Complement system; Bacteria; Biochemistry; Biology; Immune system; Immunology","score_opus":0.108969436869956,"score_gpt":0.28454726213039844,"score_spread":0.17557782526044244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2186297315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900002,0.0011633585,0.0059213988,0.0006257964,0.00086219783,0.00061370974,0.00043854778,0.00014103619,0.00023377666],"genre_scores_gemma":[0.99663556,0.000092467104,0.0021266793,0.0004876813,0.00009388144,0.000062216364,0.00017819168,0.00003355032,0.00028978774],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986077,0.00016027567,0.00037360282,0.00039824104,0.000018449997,0.00044173314],"domain_scores_gemma":[0.99913824,0.000114738395,0.00012041568,0.00033807146,0.00018788512,0.000100637284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003290715,0.000256439,0.00034874087,0.00014050138,0.00023140913,0.000053783944,0.000169228,0.0001824222,0.00012569556],"category_scores_gemma":[0.00012273734,0.00023241343,0.000050284696,0.00027495914,0.000059001643,0.00008898266,0.00011265644,0.00016779437,0.00022788643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002337488,0.00017479516,0.0015589233,0.0000099283125,0.0001891673,7.4960167e-7,0.0008647231,0.0000048818306,0.99505967,0.0005353539,0.0007803433,0.0005877363],"study_design_scores_gemma":[0.007666162,0.0013987676,0.0511443,0.00020022217,0.00066207716,0.00017003478,0.002496223,0.00020480988,0.6840033,0.00055202073,0.2498695,0.0016325789],"about_ca_topic_score_codex":0.00009068825,"about_ca_topic_score_gemma":0.00020720778,"teacher_disagreement_score":0.31105635,"about_ca_system_score_codex":0.00006357305,"about_ca_system_score_gemma":0.00009388285,"threshold_uncertainty_score":0.94775444},"labels":[],"label_agreement":null},{"id":"W2188298813","doi":"10.14745/ccdr.v40i09a01","title":"Enhanced surveillance of invasive meningococcal disease in Canada, 2006-2011","year":2014,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Medicine; Incidence (geometry); Confidence interval; Case fatality rate; Demography; Epidemiology; Population; Neisseria meningitidis; Meningococcal disease; Age groups; Pediatrics; Internal medicine; Biology; Environmental health","score_opus":0.008345696905727071,"score_gpt":0.2084991095717893,"score_spread":0.20015341266606224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2188298813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958598,0.0015357523,0.000015592168,0.00037083836,0.00062928366,0.00019395043,0.0002316089,0.000015228339,0.0011479264],"genre_scores_gemma":[0.99851936,0.00008945074,0.0000064824326,0.00011510115,0.000018433751,0.000047087167,0.0004563238,0.000015870193,0.00073191174],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99849105,0.00031154216,0.0005543655,0.00024853958,0.000047382135,0.00034712977],"domain_scores_gemma":[0.9980431,0.0002577791,0.0002680403,0.0011098654,0.00016017693,0.00016102634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002400995,0.00017813798,0.0004170731,0.000052297026,0.00013663966,0.000006563649,0.00032887826,0.00005015303,0.0005626913],"category_scores_gemma":[0.0005133446,0.00017584141,0.000058801626,0.00012679704,0.00007458531,0.00005749363,0.00015770127,0.00020276576,0.000004605933],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038039216,0.00015173781,0.9516922,0.000108422166,0.00013112556,0.000121353136,0.000022667067,0.00041093677,0.028318575,0.00028155168,0.017732559,0.00064848043],"study_design_scores_gemma":[0.0008037427,0.000018999448,0.9240197,0.000080652695,0.000033338456,0.000020293232,0.00006409923,0.00002936701,0.0053994525,0.0000532641,0.069180794,0.0002963143],"about_ca_topic_score_codex":0.9987683,"about_ca_topic_score_gemma":0.9998048,"teacher_disagreement_score":0.051448237,"about_ca_system_score_codex":0.00040582643,"about_ca_system_score_gemma":0.009540164,"threshold_uncertainty_score":0.9960748},"labels":[],"label_agreement":null},{"id":"W2189805404","doi":"10.1155/2015/613820","title":"Invasive Disease due to <i>Haemophilus influenzae</i> Type A in Children in Canada’S North: A Priority for Prevention","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; Montreal Children's Hospital","funders":"","keywords":"Carriage; Incidence (geometry); Hib vaccine; Medicine; Haemophilus influenzae; Conjugate vaccine; Meningitis; Pediatrics; Serotype; Immunization; Virology; Immunology; Antibiotics; Biology; Microbiology","score_opus":0.009775915826619692,"score_gpt":0.23174751858968343,"score_spread":0.22197160276306374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2189805404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941877,0.0028978044,0.000015030366,0.0009998877,0.0012688162,0.000386889,0.00022998132,0.0000041895873,0.000009680848],"genre_scores_gemma":[0.99869365,0.00008280538,0.000005925469,0.0009617937,0.00011609545,0.000015919135,0.0000980158,0.000009856689,0.000015963516],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998814,0.00016318254,0.0004439714,0.0001835754,0.000016354725,0.00037892922],"domain_scores_gemma":[0.9986954,0.00010705216,0.00012796585,0.00009513323,0.0002140085,0.00076044886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018781818,0.00014635766,0.00039078205,0.0003256403,0.00006965442,0.000012390606,0.00013135867,0.00014437547,0.00008722591],"category_scores_gemma":[0.0016363097,0.00012921885,0.000060422593,0.00022101507,0.00008608006,0.00006822997,0.00002913826,0.0002452272,0.0000052508444],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028209115,0.0000783306,0.99055433,0.000017299486,0.00007477489,0.00006732021,0.00010232977,0.0000297868,0.0006233208,0.00005552321,0.004834653,0.003280243],"study_design_scores_gemma":[0.0038089354,0.00065341993,0.97548056,0.00013847828,0.00006532468,0.0014143707,0.000079409554,8.7297695e-7,0.00005002987,0.00038156973,0.01772782,0.00019923641],"about_ca_topic_score_codex":0.7023777,"about_ca_topic_score_gemma":0.99354553,"teacher_disagreement_score":0.29116786,"about_ca_system_score_codex":0.0005098997,"about_ca_system_score_gemma":0.013447485,"threshold_uncertainty_score":0.99214536},"labels":[],"label_agreement":null},{"id":"W2190338955","doi":"10.2165/00019053-200321060-00006","title":"Cost-Benefit Model Comparing Two Alternative Immunisation Programmes Against Serogroup C Meningococcal Disease","year":2003,"lang":"en","type":"article","venue":"PharmacoEconomics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"Health Canada","keywords":"Medicine; Outbreak; Meningococcal disease; Epidemiology; Vaccination; Public health; Disease burden; Health economics; Environmental health; Incidence (geometry); Pediatrics; Demography; Emergency medicine; Neisseria meningitidis; Immunology; Population; Internal medicine; Virology","score_opus":0.055683705863028024,"score_gpt":0.33345267494193453,"score_spread":0.2777689690789065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2190338955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99425685,0.00039727084,0.0013726145,0.00010106024,0.0011592546,0.00046642055,0.00004380759,0.000113341244,0.0020893505],"genre_scores_gemma":[0.99850476,0.0001958549,0.00028012277,0.0001960038,0.000071271395,0.00015661972,0.00023451082,0.000026340567,0.00033452144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899703,0.000079521196,0.00030909554,0.00027740136,0.000008212583,0.00032873702],"domain_scores_gemma":[0.9995055,0.000044097695,0.00014589589,0.00018855443,0.00005275597,0.00006316997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017885175,0.00020311293,0.0002385878,0.00008089429,0.00026091325,0.0000655288,0.00014971141,0.000058571914,0.0002284374],"category_scores_gemma":[0.00001358427,0.0002112144,0.00010136743,0.000049495688,0.000060749022,0.000274317,0.000059475413,0.00020904063,0.00021897911],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010587217,0.001173438,0.059570644,0.000053554628,0.0012565588,0.000003056637,0.0016028221,0.16105808,0.6479832,0.07411025,0.001702668,0.050427042],"study_design_scores_gemma":[0.022203673,0.00016757667,0.005362235,0.00006941415,0.000508041,0.000055265104,0.0005567307,0.34170225,0.36240378,0.006952923,0.25795165,0.0020664698],"about_ca_topic_score_codex":0.00008628576,"about_ca_topic_score_gemma":0.000022748587,"teacher_disagreement_score":0.28557938,"about_ca_system_score_codex":0.00011234484,"about_ca_system_score_gemma":0.000050972405,"threshold_uncertainty_score":0.8613073},"labels":[],"label_agreement":null},{"id":"W2191736121","doi":"10.1093/cid/civ491","title":"Regulatory Pathways That Facilitated Timely Registration of a New Group A Meningococcal Conjugate Vaccine for Africa's Meningitis Belt Countries","year":2015,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Canada","funders":"World Health Organization","keywords":"Medicine; License; Licensure; Public health; Agency (philosophy); Meningococcal vaccine; Marketing authorization; Family medicine; Immunization; Political science; Medical education; Nursing; Immunology","score_opus":0.13179910557923635,"score_gpt":0.36960340201896313,"score_spread":0.23780429643972678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2191736121","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004542913,0.9872971,0.0001982355,0.000029720482,0.0025184634,0.0020122787,0.0027289684,0.00036752078,0.00030475596],"genre_scores_gemma":[0.00803985,0.98296034,0.000025017102,0.000019965013,0.00061020855,0.0005679645,0.0047641485,0.000109071196,0.0029034496],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958803,0.0007054267,0.0020512748,0.00080138986,0.00006368564,0.0004979394],"domain_scores_gemma":[0.99543536,0.0016724984,0.0015807069,0.00067196565,0.00043829324,0.00020116901],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009201418,0.00066773884,0.0031391222,0.0002363658,0.0002569148,0.00006910301,0.00029274158,0.0011575138,0.00036225334],"category_scores_gemma":[0.0012242749,0.0005477334,0.0013274669,0.00028107708,0.00030490174,0.00020609029,0.000139044,0.00046220087,0.00013821863],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008977433,0.0019547225,0.0021525559,0.009508663,0.0052747894,0.000008204408,0.00026128197,0.000002447297,0.00015413304,0.0038774146,0.31943077,0.6564773],"study_design_scores_gemma":[0.0028490804,0.0017772407,0.0004912175,0.0018768372,0.002955095,0.000040178646,0.000022875496,0.0000010659315,0.0000136864655,0.00094146363,0.98849416,0.0005370875],"about_ca_topic_score_codex":0.00013799875,"about_ca_topic_score_gemma":0.00007585625,"teacher_disagreement_score":0.6690634,"about_ca_system_score_codex":0.00013123032,"about_ca_system_score_gemma":0.00096099905,"threshold_uncertainty_score":0.99969745},"labels":[],"label_agreement":null},{"id":"W2196933481","doi":"10.14745/ccdr.v41i05a02","title":"Statement on Meningococcal Disease and the International Traveller","year":2015,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Ottawa Hospital","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Meningococcal meningitis; Meningococcal disease; Hajj; Vaccination; Meningococcal vaccine; Meningitis; Booster (rocketry); Immunization; Neisseria meningitidis; Travel medicine; Disease; Environmental health; Family medicine; Pediatrics; Immunology; Geography","score_opus":0.026481528823021367,"score_gpt":0.25439493176575934,"score_spread":0.22791340294273796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2196933481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9746717,0.0023171697,0.000011979062,0.013514965,0.0016447718,0.00033172514,0.00010451755,0.000035973906,0.0073671537],"genre_scores_gemma":[0.9944121,0.00010069882,0.0000055614973,0.0005223666,0.000036033347,0.000062914914,0.00029052116,0.000008560508,0.004561199],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99925613,0.0001460525,0.00025283618,0.00014960192,0.00004433964,0.00015106158],"domain_scores_gemma":[0.999,0.000088149114,0.00009660961,0.0005721467,0.00009664474,0.00014643135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035841163,0.0001072385,0.0001421858,0.000023156968,0.00021579301,0.000033703396,0.00022251172,0.000025001613,0.00026807864],"category_scores_gemma":[0.00023626258,0.00007125075,0.00003945912,0.00003835215,0.00012876722,0.00004402926,0.00017538936,0.00014284931,0.000009021688],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009548838,0.00069986307,0.06532418,0.00003585889,0.0016431373,0.00052823516,0.00041465336,0.00032011422,0.0021916882,0.023223678,0.8925675,0.0035022455],"study_design_scores_gemma":[0.0023586133,0.000019530577,0.02445344,0.000021046433,0.00007919592,0.00006018948,0.00021386736,0.000059514263,0.0001159957,0.000348606,0.9721396,0.0001303952],"about_ca_topic_score_codex":0.12136637,"about_ca_topic_score_gemma":0.050632745,"teacher_disagreement_score":0.0795721,"about_ca_system_score_codex":0.00012674877,"about_ca_system_score_gemma":0.0009869372,"threshold_uncertainty_score":0.9666907},"labels":[],"label_agreement":null},{"id":"W2198744375","doi":"10.1155/2015/393659","title":"Characterization of Invasive <i>Neisseria meningitidis</i> from Atlantic Canada, 2009 To 2013: With Special Reference to the Nonpolysaccharide Vaccine Targets (Pora, Factor H Binding Protein, <i>Neisseria</i> Heparin‐Binding Antigen and <i>Neisseria</i> Adhesin A)","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of Prince Edward Island; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Government of New Brunswick; Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Neisseria meningitidis; Neisseria; Microbiology; Antigen; Meningococcal vaccine; Biology; Medicine; Immunology; Bacteria; Genetics","score_opus":0.008703159924010507,"score_gpt":0.2021310560053471,"score_spread":0.1934278960813366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2198744375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945692,0.0007982439,0.000055445817,0.0015837637,0.0013935247,0.0005051051,0.001063541,0.000011339512,0.000019864627],"genre_scores_gemma":[0.9985508,0.00018024727,0.00002322034,0.00042996937,0.00042942484,0.000017027895,0.00028410752,0.000025766602,0.00005945298],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99823195,0.00022418273,0.0006405414,0.0003402284,0.00003667329,0.0005264434],"domain_scores_gemma":[0.99801314,0.00011800094,0.00043704882,0.00019486352,0.00036083825,0.000876121],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022368782,0.00031494154,0.0006796889,0.0002841135,0.00030815374,0.00006212682,0.00026885874,0.00024384665,0.00045759618],"category_scores_gemma":[0.0004033581,0.00021945596,0.000056091452,0.00029889587,0.00013158926,0.00015282696,0.000075970034,0.00033328342,0.000015490143],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038733246,0.000039669492,0.135397,0.00002195871,0.00022885564,0.000025931464,0.00029098574,0.0000018671898,0.8578027,0.000030564275,0.0050890697,0.00068406615],"study_design_scores_gemma":[0.008355588,0.0053590653,0.39597932,0.001782166,0.0006490822,0.0045260973,0.0014931579,0.0000017323745,0.23125868,0.00008715204,0.34883037,0.001677581],"about_ca_topic_score_codex":0.36257133,"about_ca_topic_score_gemma":0.83155733,"teacher_disagreement_score":0.62654406,"about_ca_system_score_codex":0.00015165342,"about_ca_system_score_gemma":0.0028602327,"threshold_uncertainty_score":0.89491546},"labels":[],"label_agreement":null},{"id":"W2199539680","doi":"10.1155/2004/740537","title":"Should University Students Be Vaccinated against Meningococcal Disease in Canada?","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Medicine; Virology; Immunology; Neisseria meningitidis; Biology; Immunization; Antibody","score_opus":0.007234293661920431,"score_gpt":0.21888481928493878,"score_spread":0.21165052562301834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2199539680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99481577,0.0018771623,0.000013717342,0.0016258252,0.001319048,0.00010618248,0.00018624608,0.000008117073,0.000047918285],"genre_scores_gemma":[0.99881375,0.00035021428,0.0000015252018,0.0006750785,0.00005705752,9.624824e-7,0.00005390902,0.000008997576,0.00003849507],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989148,0.00015232745,0.00032779537,0.00017788906,0.000022208624,0.00040499563],"domain_scores_gemma":[0.9989292,0.00007054116,0.00012958971,0.00009558025,0.00011041859,0.000664644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001386456,0.00016023788,0.00034202385,0.00029223535,0.0001828344,0.00001479218,0.0002206164,0.00018645133,0.0005436296],"category_scores_gemma":[0.00025841044,0.00014163024,0.00007887112,0.0001791677,0.00015772926,0.00007504791,0.000042769174,0.00040230024,0.000004881416],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018577586,0.00016024151,0.98690385,0.000023900071,0.00021589166,0.00085014704,0.00009976052,0.00008210859,0.0067486027,0.00035820997,0.002119358,0.0022521466],"study_design_scores_gemma":[0.010575657,0.00040459112,0.8672752,0.00027177905,0.00016752564,0.0012131145,0.00047023097,0.0000015471262,0.00026421796,0.00017310573,0.11875392,0.00042912998],"about_ca_topic_score_codex":0.7909494,"about_ca_topic_score_gemma":0.97022927,"teacher_disagreement_score":0.17927985,"about_ca_system_score_codex":0.0008157177,"about_ca_system_score_gemma":0.0077670547,"threshold_uncertainty_score":0.997858},"labels":[],"label_agreement":null},{"id":"W2199590807","doi":"10.1016/j.vaccine.2015.09.012","title":"Universal tetanus, diphtheria, acellular pertussis (Tdap) vaccination of adults: What the Canadian public knows and wants to know","year":2015,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St. Francis Xavier University; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Sanofi Pasteur; GlaxoSmithKline","keywords":"Diphtheria; Tetanus; Medicine; Vaccination; Focus group; Whooping cough; Public health; Family medicine; Pertussis vaccine; Immunization; Pediatrics; Immunology; Nursing","score_opus":0.01585065006503352,"score_gpt":0.22189383423152287,"score_spread":0.20604318416648934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2199590807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98343706,0.0062823347,0.000028737737,0.008427724,0.0011022448,0.000311909,0.000032462416,0.000031226948,0.00034627898],"genre_scores_gemma":[0.9982686,0.00042163976,0.00003719304,0.000107037326,0.00007069832,0.000008305672,0.00006596516,0.000014873721,0.0010056878],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991487,0.00013256991,0.00021194044,0.00021132696,0.000020689748,0.0002747259],"domain_scores_gemma":[0.99921215,0.000042077114,0.0000809461,0.0002799045,0.0002760935,0.00010881193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027208394,0.00014658214,0.00022179788,0.00021216043,0.00023840483,0.000072126146,0.00017924496,0.00016653896,0.0007260948],"category_scores_gemma":[0.000119044365,0.00010081417,0.00003874168,0.00030060843,0.000012366934,0.00035711832,0.00007546553,0.00012514509,0.000111521076],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001604188,0.0006352682,0.091390885,0.000101285965,0.000998353,0.000011812983,0.009441194,0.00001841272,0.34755713,0.012122683,0.102028996,0.4340898],"study_design_scores_gemma":[0.00345039,0.0005910076,0.0498861,0.000094456256,0.000083488485,0.00008763081,0.003935847,0.0000376915,0.018985447,0.00009780201,0.92244565,0.00030450377],"about_ca_topic_score_codex":0.033168033,"about_ca_topic_score_gemma":0.18922915,"teacher_disagreement_score":0.8204166,"about_ca_system_score_codex":0.000102861624,"about_ca_system_score_gemma":0.00018113373,"threshold_uncertainty_score":0.9732702},"labels":[],"label_agreement":null},{"id":"W2205076993","doi":"10.1093/pch/7.6.390","title":"Dexamethasone and antibiotics for the empirical treatment of bacterial meningitis in Canadian children: A survey of paediatric infectious diseases specialists","year":2002,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary; University of Saskatchewan","funders":"","keywords":"Dexamethasone; Bacterial meningitis; Antibiotics; Medicine; Pediatric Infectious Disease; Meningitis; Pediatrics; Intensive care medicine; Internal medicine; Microbiology; Biology","score_opus":0.04143371775750446,"score_gpt":0.28964252407884644,"score_spread":0.24820880632134198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2205076993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9734287,0.02218161,0.000014836396,0.0007135668,0.0009438488,0.0007536036,0.0019244071,0.000014331492,0.000025051208],"genre_scores_gemma":[0.98273206,0.016502267,0.000026406065,0.000043836382,0.00032661244,0.0000067503584,0.00033384145,0.000016402208,0.000011829843],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984944,0.00029932256,0.00050895714,0.00023918778,0.000023391764,0.00043477686],"domain_scores_gemma":[0.99857974,0.00077046535,0.0002641477,0.00020292972,0.00008628208,0.00009646144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036477533,0.00017622436,0.00050412194,0.0003337325,0.0002478755,0.000013905367,0.00008670265,0.00016673784,0.0001207829],"category_scores_gemma":[0.0003228257,0.00013340291,0.00009114955,0.00053851225,0.00009199465,0.000040573672,0.000023880173,0.000103921615,0.0000033728281],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006001303,0.00037494817,0.9835339,0.000031232827,0.000079426834,2.3179607e-7,0.000454631,0.00000597215,0.00004080136,0.00006735873,0.0011640535,0.014187419],"study_design_scores_gemma":[0.0023280967,0.00086422154,0.99227184,0.00000826797,0.00007342382,0.000022385782,0.000012848437,0.00001596892,0.00008175203,0.000011523379,0.0041930894,0.00011658423],"about_ca_topic_score_codex":0.27352527,"about_ca_topic_score_gemma":0.3270159,"teacher_disagreement_score":0.053490628,"about_ca_system_score_codex":0.00014633739,"about_ca_system_score_gemma":0.00024057305,"threshold_uncertainty_score":0.7313124},"labels":[],"label_agreement":null},{"id":"W2207088714","doi":"10.1097/inf.0000000000001056","title":"Persistence of Bactericidal Antibodies After Infant Serogroup B Meningococcal Immunization and Booster Dose Response at 12, 18 or 24 Months of Age","year":2016,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Booster dose; Meningococcal vaccine; Titer; Booster (rocketry); Immunization; Pediatrics; Antibody titer; Antibody; Immunology","score_opus":0.0148422780896738,"score_gpt":0.2368160616496025,"score_spread":0.2219737835599287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2207088714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973047,0.0014376574,0.00004601224,0.00014915952,0.00072168215,0.00020212348,0.00007421924,0.00002282411,0.000041615174],"genre_scores_gemma":[0.99723464,0.0017181375,0.000011847562,0.0000245465,0.00016958827,0.000014321741,0.0000039618426,0.000015842623,0.0008070877],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862623,0.000489206,0.0004512998,0.00015033531,0.00003947166,0.00024346307],"domain_scores_gemma":[0.99877733,0.00039429477,0.0003790973,0.00023229062,0.00015768576,0.000059310078],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004324022,0.00017853643,0.0002801653,0.00020890297,0.00031700233,0.000027043616,0.00012010701,0.00010868819,0.0010113108],"category_scores_gemma":[0.00028336653,0.000090981506,0.00014345795,0.00015712026,0.00022883365,0.00020759269,0.00017256007,0.00015655659,0.000016463624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010407692,0.00017664197,0.74174607,0.00004287841,0.00015807837,0.000012136003,0.00067329657,0.0000028348206,0.24565527,0.0000057504635,0.0005771744,0.0005422046],"study_design_scores_gemma":[0.0022175363,0.0005853518,0.9932049,0.00004992098,0.00039906608,0.000646935,0.00007802518,0.0000017807787,0.001665903,0.000044619755,0.000946353,0.00015963064],"about_ca_topic_score_codex":0.00004130307,"about_ca_topic_score_gemma":0.000032276344,"teacher_disagreement_score":0.25145882,"about_ca_system_score_codex":0.00005118757,"about_ca_system_score_gemma":0.00010039967,"threshold_uncertainty_score":0.9999019},"labels":[],"label_agreement":null},{"id":"W2212540874","doi":"10.1093/ofid/ofu052.1288","title":"1742Impact of Material and Social Seprivation on Serogroup B Invasive Meningococcal Disease (IMD-B) Incidence and Outcomes in the Province of Quebec, Canada","year":2014,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ste. Anne's Hospital; Université Laval; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Incidence (geometry); Meningococcal disease; Bacterial meningitis; Demography; Neisseria meningitidis; Pediatrics; Virology; Meningitis","score_opus":0.00696419072361717,"score_gpt":0.24185959675323443,"score_spread":0.23489540602961725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2212540874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983034,0.00003584616,0.000003868711,0.0007203692,0.0001848437,0.00046620512,0.00017084672,0.000008745698,0.000105888095],"genre_scores_gemma":[0.99958867,0.000010164024,0.0000011531245,0.00020418118,0.000016338734,0.00004655598,0.00007233956,0.0000072542502,0.000053325446],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991859,0.00022183462,0.00023325614,0.00017305117,0.000027856791,0.0001580851],"domain_scores_gemma":[0.9993725,0.0002475496,0.00017605585,0.00013968893,0.00004087211,0.000023373455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121970545,0.00013042998,0.0002738139,0.00005472694,0.0001816559,0.000051737337,0.00014502039,0.000056996094,0.000057416608],"category_scores_gemma":[0.00018875436,0.00009153696,0.000031537158,0.00006738536,0.00012517486,0.00019602731,0.00014979877,0.00006853492,9.060166e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043277803,0.00025096055,0.98295075,0.00007170249,0.00006314163,0.0000011575252,0.00017940074,0.0000059264116,0.009422786,0.003829891,0.0012170813,0.001574452],"study_design_scores_gemma":[0.001015491,0.00018386841,0.99491197,0.00003929017,0.000047973946,0.0000037719358,0.00018988246,0.0000018725183,0.0023111785,0.00054147746,0.0006420178,0.00011122573],"about_ca_topic_score_codex":0.30856973,"about_ca_topic_score_gemma":0.69536585,"teacher_disagreement_score":0.3867961,"about_ca_system_score_codex":0.00003897714,"about_ca_system_score_gemma":0.00023944727,"threshold_uncertainty_score":0.69603455},"labels":[],"label_agreement":null},{"id":"W2214354261","doi":"10.1016/s0749-3797(02)00462-2","title":"Vaccinating first-year college students living in dormitories for Meningococcal disease","year":2002,"lang":"en","type":"article","venue":"American Journal of Preventive Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Santé Montérégie","funders":"","keywords":"Medicine; Vaccination; Meningococcal disease; Cost–benefit analysis; Cost effectiveness; Years of potential life lost; Environmental health; Cohort; Demography; Immunization; Vaccine efficacy; Pediatrics; Neisseria meningitidis; Population; Immunology; Life expectancy; Internal medicine","score_opus":0.013209715208595244,"score_gpt":0.28623750531738706,"score_spread":0.2730277901087918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2214354261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622244,0.001110092,0.00027914325,0.00078801095,0.0012657938,0.00021328831,0.000012642741,0.000008468146,0.0001001228],"genre_scores_gemma":[0.9983889,0.0001754195,0.00016422388,0.000030218185,0.00038598146,0.000017300332,0.0000024329413,0.000012013007,0.00082355127],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998948,0.00017724979,0.0004943092,0.00012661624,0.00003997981,0.00021388402],"domain_scores_gemma":[0.99867344,0.0005411174,0.00047027692,0.000091729344,0.00017438037,0.0000490618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054933055,0.00012661723,0.0004350221,0.0002067449,0.00012299349,0.000006933031,0.0001841031,0.000031712712,0.00077242806],"category_scores_gemma":[0.0008040518,0.000094330164,0.000092945535,0.00024844278,0.00014079723,0.00012815186,0.000047922367,0.00019189778,0.000007976409],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006811329,0.00080840965,0.95762485,0.000051973446,0.00049403834,0.000016556412,0.004349956,0.000007246426,0.013618812,0.00051163393,0.008521577,0.013313806],"study_design_scores_gemma":[0.0072154487,0.005101305,0.93945473,0.00166955,0.00031204376,0.00012651362,0.0121837715,0.000013331436,0.0007476898,0.00031085606,0.032550078,0.00031467032],"about_ca_topic_score_codex":0.000049313,"about_ca_topic_score_gemma":0.00002979183,"teacher_disagreement_score":0.0240285,"about_ca_system_score_codex":0.000062995896,"about_ca_system_score_gemma":0.000017934773,"threshold_uncertainty_score":0.84575456},"labels":[],"label_agreement":null},{"id":"W2216448078","doi":"10.1155/2001/597063","title":"Pertussis Immunization for Adolescents: What Are We Waiting for?","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Grace (Canada); Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Diphtheria; Medicine; Tetanus; Immunization; Pertussis vaccine; Pediatrics; Whooping cough; Vaccination; Hib vaccine; Conjugate vaccine; Inactivated Poliovirus Vaccine; Poliovirus; Immunology; Antigen; Virus","score_opus":0.010310770461654782,"score_gpt":0.23582111810250492,"score_spread":0.22551034764085012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2216448078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96964574,0.02050551,0.0019381642,0.003607192,0.003852317,0.0002783077,0.00014381841,0.00001639456,0.000012572963],"genre_scores_gemma":[0.99375594,0.0050118878,0.00001108245,0.0006495062,0.00036544888,0.000016643016,0.00009298554,0.000016195982,0.000080305734],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990132,0.00009000742,0.0003765269,0.00014927592,0.000008116488,0.00036290646],"domain_scores_gemma":[0.9989324,0.00016702079,0.00024784144,0.00008343865,0.00031589984,0.00025337146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001817146,0.00014305835,0.00033684174,0.00022356492,0.0003868805,0.00005490858,0.000114729955,0.00030109056,0.00036312573],"category_scores_gemma":[0.00059714646,0.000115416755,0.0001644983,0.00009242581,0.00018686017,0.00016791381,0.000014631021,0.0001701786,0.000003989985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009597083,0.00053822657,0.5597153,0.0005014676,0.0011313994,0.00005055094,0.0006787982,0.000018092134,0.09590452,0.0019427137,0.038003184,0.30055603],"study_design_scores_gemma":[0.008171354,0.0013352553,0.028016502,0.0016517729,0.00043592206,0.0068484866,0.0016819915,0.000028971597,0.00072175084,0.0008984923,0.949737,0.00047251146],"about_ca_topic_score_codex":0.0005599645,"about_ca_topic_score_gemma":0.004248454,"teacher_disagreement_score":0.9117338,"about_ca_system_score_codex":0.000062901825,"about_ca_system_score_gemma":0.00044977485,"threshold_uncertainty_score":0.47065586},"labels":[],"label_agreement":null},{"id":"W2220673999","doi":"10.1155/2005/216369","title":"Potential Capsule Switching from Serogroup Y to B: The Characterization of Three such <i>Neisseria meningitidis</i> Isolates Causing Invasive Meningococcal Disease in Canada","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Blood Services; BC Centre for Disease Control; Health Canada","funders":"European Commission; University of Oxford; Wellcome Trust","keywords":"Neisseria meningitidis; Multilocus sequence typing; Microbiology; Meningococcal disease; Neisseriaceae; Housekeeping gene; Biology; Virology; Typing; Neisseria; Serotype; Genotype; Gene; Genetics; Bacteria; Antibiotics","score_opus":0.004117019216544386,"score_gpt":0.18917631605054577,"score_spread":0.18505929683400138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2220673999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939282,0.0017962084,0.00024193345,0.0021124743,0.0013844498,0.00016972602,0.00035767877,0.000005231173,0.0000041232197],"genre_scores_gemma":[0.9989079,0.00012324707,0.000006115012,0.0005321402,0.00027844714,0.0000065136437,0.00012725187,0.000013002476,0.0000053721997],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987124,0.0001668003,0.0005506376,0.00018538366,0.000018517154,0.00036627013],"domain_scores_gemma":[0.99898654,0.00010611209,0.00024629894,0.00012246598,0.0001320643,0.00040652597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015756549,0.00017350624,0.00037929573,0.00018587292,0.0002115319,0.00002606387,0.00015565022,0.00013757647,0.0005510537],"category_scores_gemma":[0.0002792032,0.00012959812,0.000078758465,0.00015801207,0.00010131702,0.000111259804,0.000044007797,0.00030216321,0.0000039702036],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012068748,0.000050064456,0.22398147,0.000017102344,0.00016884538,0.00003938155,0.00029184186,0.00009895575,0.76987964,0.00003514863,0.00034614606,0.0049706893],"study_design_scores_gemma":[0.0032251861,0.0003822443,0.9660427,0.00052671856,0.00031438272,0.0011387311,0.0003428228,0.00007791632,0.0117149865,0.0001252276,0.015639829,0.00046928253],"about_ca_topic_score_codex":0.76788694,"about_ca_topic_score_gemma":0.9731892,"teacher_disagreement_score":0.7581647,"about_ca_system_score_codex":0.00024800163,"about_ca_system_score_gemma":0.0033711207,"threshold_uncertainty_score":0.6033651},"labels":[],"label_agreement":null},{"id":"W2221568405","doi":"10.15167/2421-4248/jpmh2015.56.3.508","title":"Meningococcal B vaccination strategies and their practical application in Italy","year":2015,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Reverse vaccinology; Vaccination; Meningococcal vaccine; Meningococcal disease; Medicine; Disease; Immunization; Neisseria meningitidis; Intensive care medicine; Virology; Immunology; Biology; Antigen","score_opus":0.03562822104230385,"score_gpt":0.2677248454436714,"score_spread":0.23209662440136758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2221568405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995476,0.0003424804,0.00064398634,0.00069410814,0.00021826103,0.00033611513,0.000002117472,0.000040655155,0.0022462728],"genre_scores_gemma":[0.99919426,0.000008991688,0.00001967716,0.00001719334,0.0000350737,0.00059431733,0.000024470744,0.000004144188,0.000101880694],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99957037,0.00006203475,0.00010867071,0.00011872428,0.0000050037165,0.00013520887],"domain_scores_gemma":[0.99979013,0.00004636088,0.000037255148,0.0000717077,0.000036717127,0.000017797849],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025160753,0.000060731738,0.00008599141,0.000059219597,0.000031585805,0.000036447367,0.000027114816,0.00009743796,0.000015226895],"category_scores_gemma":[0.000072816554,0.000047287012,0.0000104574865,0.00008051508,0.00001640654,0.0002986648,0.000024646766,0.00009065526,0.000018334174],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006899784,0.00070531946,0.054096825,0.00003174409,0.0001259222,0.0000017894566,0.0021468361,0.000017594188,0.10208384,0.07616247,0.0040615126,0.7598762],"study_design_scores_gemma":[0.0013595911,0.00004526908,0.95170045,0.0000015185451,0.000009122397,0.00008751931,0.0013746303,0.000023978153,0.006791103,0.003436384,0.03504808,0.0001223656],"about_ca_topic_score_codex":0.00012052935,"about_ca_topic_score_gemma":0.0000978056,"teacher_disagreement_score":0.89760363,"about_ca_system_score_codex":0.000024227282,"about_ca_system_score_gemma":0.00002249248,"threshold_uncertainty_score":0.19283085},"labels":[],"label_agreement":null},{"id":"W2223227477","doi":"10.33321/cdi.2002.26.9","title":"Epidemiology of invasive meningococcal disease in North Queensland, 1995 to 1999","year":2002,"lang":"en","type":"article","venue":"Communicable Diseases Intelligence","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plains Health Centre","funders":"","keywords":"Medicine; Meningococcal disease; Outbreak; Epidemiology; Incidence (geometry); Disease; Chemoprophylaxis; Indigenous; Neisseria meningitidis; Pediatrics; Internal medicine; Virology","score_opus":0.05679102526200478,"score_gpt":0.30076045965937787,"score_spread":0.2439694343973731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2223227477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97598267,0.02195998,0.00028029183,0.0003901329,0.0003641165,0.000365285,0.00019645026,0.000053350857,0.00040770986],"genre_scores_gemma":[0.99690443,0.0021230392,0.00012400659,0.00022277811,0.000021833175,0.000094354094,0.00012778239,0.000014798819,0.00036694578],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99807525,0.00059112516,0.00061570597,0.00029154663,0.000016267431,0.0004101238],"domain_scores_gemma":[0.99743325,0.0012788499,0.00014359408,0.0009403253,0.00008527481,0.00011872861],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017480299,0.0002009828,0.0005185722,0.0001973661,0.00013834362,0.000003955161,0.00068204507,0.00010727964,0.001898249],"category_scores_gemma":[0.0015051154,0.00018320639,0.00014145099,0.00043905576,0.00025048738,0.0001004499,0.00041767862,0.00026562365,0.0006350485],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026430574,0.00059587794,0.9899484,0.00004399946,0.00006018683,0.0000039065003,0.00033959717,0.0008942624,0.0009917275,0.0015392492,0.0017726278,0.0035458761],"study_design_scores_gemma":[0.00066810765,0.0004372491,0.9643603,0.0002465916,0.000114780145,0.000013878957,0.00035660187,0.0003629038,0.0034299965,0.0014001692,0.027991885,0.00061754306],"about_ca_topic_score_codex":0.0017645266,"about_ca_topic_score_gemma":0.0018915253,"teacher_disagreement_score":0.026219256,"about_ca_system_score_codex":0.000044024895,"about_ca_system_score_gemma":0.00003743724,"threshold_uncertainty_score":0.99901414},"labels":[],"label_agreement":null},{"id":"W2224029405","doi":"10.1155/2014/763128","title":"Evaluation of Amplification Targets for the Specific Detection of <i>Bordetella pertussis</i> Using Real‐Time Polymerase Chain Reaction","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Bordetella pertussis; Polymerase chain reaction; Real-time polymerase chain reaction; Virology; Computational biology; Computer science; Biology; Genetics; Gene; Bacteria","score_opus":0.013386177374567914,"score_gpt":0.24742786362257707,"score_spread":0.23404168624800917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2224029405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898531,0.0058264793,0.002188807,0.00020714248,0.0015492389,0.00025458087,0.000083152336,0.000005594671,0.000031921056],"genre_scores_gemma":[0.9990738,0.0005966179,0.000009896044,0.000039583763,0.00021740825,0.000007571916,0.00003482819,0.000010191113,0.000010087625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987319,0.00041753086,0.00049386744,0.00013242199,0.000031609463,0.00019263287],"domain_scores_gemma":[0.9982019,0.00037166374,0.0004946652,0.00013050533,0.0006854106,0.00011586395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012574616,0.00011496685,0.00030829254,0.00022709627,0.00022928497,0.000008337584,0.000091610396,0.00023167262,0.00022804576],"category_scores_gemma":[0.0008821539,0.000081955266,0.00013317025,0.0001196471,0.0003008349,0.00005572078,0.000009227384,0.00013648231,0.0000018948078],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078194615,0.000049189435,0.0012748054,0.000018244951,0.00015791025,1.4766245e-7,0.00006804716,0.000016883343,0.92656875,0.00010959311,0.00019051645,0.071467735],"study_design_scores_gemma":[0.022660008,0.0062110494,0.18167233,0.00084438454,0.006556908,0.0058630644,0.001101262,0.003227414,0.5293261,0.0028006097,0.23845732,0.0012795648],"about_ca_topic_score_codex":0.0041980552,"about_ca_topic_score_gemma":0.0022450234,"teacher_disagreement_score":0.39724267,"about_ca_system_score_codex":0.000099842866,"about_ca_system_score_gemma":0.00057952636,"threshold_uncertainty_score":0.63462317},"labels":[],"label_agreement":null},{"id":"W2227734548","doi":"10.1155/2004/370415","title":"Risk and Prevention of Meningococcal Disease among Education Workers: A Review","year":2004,"lang":"en","type":"review","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Intégré de Santé et de Services Sociaux du Bas-Saint-Laurent; Université Laval; Institut National de Santé Publique du Québec; Université de Montréal; Centre hospitalier universitaire de Québec","funders":"Health Canada; Centers for Disease Control and Prevention; Institut de Veille Sanitaire; Ministère de la Santé et des Services sociaux","keywords":"Meningococcal disease; Disease; Medicine; Environmental health; Family medicine; Neisseria meningitidis; Internal medicine; Biology","score_opus":0.008764895574618544,"score_gpt":0.2768002494717802,"score_spread":0.26803535389716165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2227734548","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009701004,0.98791736,0.000022965405,0.00006508279,0.0015245951,0.00047571867,0.00025952517,0.000007827409,0.000025945541],"genre_scores_gemma":[0.0067558535,0.99266136,0.0000061059577,0.00005796984,0.00016664842,0.000029279126,0.00022373052,0.000021414333,0.00007762729],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99794596,0.0005512106,0.0009459621,0.00025232974,0.00001665843,0.0002878984],"domain_scores_gemma":[0.9978239,0.00016261089,0.0010574094,0.00016378988,0.00018966863,0.0006026569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035212765,0.00030566618,0.0014451647,0.00041499798,0.00016418056,0.000017525055,0.00015236008,0.00051427225,0.00068414287],"category_scores_gemma":[0.0009753354,0.00022713556,0.00043554624,0.00019016498,0.0005931357,0.000079813915,0.00003930457,0.00059099525,0.000007305723],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002139469,0.00014691117,0.009632038,0.016085953,0.0007033807,0.000014515877,0.0000256384,9.891528e-8,0.000010470361,0.00016741458,0.0030886033,0.97010356],"study_design_scores_gemma":[0.00072803395,0.00038997308,0.0029470301,0.08086687,0.0039739213,0.00234394,0.000019568135,1.9352917e-8,6.7361765e-7,0.00031692494,0.90815127,0.00026174643],"about_ca_topic_score_codex":0.0032697853,"about_ca_topic_score_gemma":0.00179914,"teacher_disagreement_score":0.96984184,"about_ca_system_score_codex":0.00013478241,"about_ca_system_score_gemma":0.0069619413,"threshold_uncertainty_score":0.99866766},"labels":[],"label_agreement":null},{"id":"W2229533966","doi":"10.1155/2015/506367","title":"Are Physicians Obligated to Tell Parents about the Meningococcal Serogroup B Vaccine?","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stollery Children's Hospital","funders":"","keywords":"Meningococcal vaccine; Meningococcal meningitis; Virology; Medicine; Meningococcal disease; Family medicine; Neisseria meningitidis; Immunology; Immunization; Biology; Genetics; Antibody","score_opus":0.011615569353974054,"score_gpt":0.24093555403429257,"score_spread":0.2293199846803185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2229533966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98953533,0.0043704705,0.00005269906,0.0025623755,0.0030886594,0.00016390851,0.00011525513,0.000019729086,0.00009159798],"genre_scores_gemma":[0.9971458,0.000098878016,0.0000032763971,0.0022434136,0.00036610023,0.000009009814,0.000029762148,0.000015030995,0.000088774934],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986769,0.00024481514,0.00041622116,0.00018563522,0.000020062194,0.0004563727],"domain_scores_gemma":[0.9984826,0.000109930734,0.00028875907,0.00015261733,0.00031279033,0.00065330963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027435378,0.000191639,0.0004148782,0.00020613112,0.00027885972,0.00004312606,0.0002497749,0.0002646778,0.00039427765],"category_scores_gemma":[0.0007307917,0.00012551575,0.00012327037,0.00022520593,0.00021406087,0.00006789663,0.000049114286,0.00039296655,0.000081257036],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030907255,0.00029604527,0.7652938,0.000030220552,0.0008679913,0.00013561329,0.00109924,0.000025781967,0.036915522,0.0003018769,0.17340505,0.02131981],"study_design_scores_gemma":[0.004542464,0.0013352775,0.26208803,0.0002859134,0.00029937702,0.0054306495,0.0013800788,0.0000023002667,0.00092526426,0.00024478885,0.7230451,0.00042076496],"about_ca_topic_score_codex":0.0040037786,"about_ca_topic_score_gemma":0.018444963,"teacher_disagreement_score":0.54964006,"about_ca_system_score_codex":0.00009774979,"about_ca_system_score_gemma":0.0006176699,"threshold_uncertainty_score":0.9994659},"labels":[],"label_agreement":null},{"id":"W2231836204","doi":"10.1155/2012/131328","title":"Genetic and Antigenic Analysis of Invasive Serogroup C <i>Neisseria meningitidis</i> in Canada: A Decrease in the Electrophoretic Type (Et)‐15 Clonal Type and an Increase in the Proportion of Isolates Belonging to the Et‐37 (But Not Et‐15) Clonal Type During the Period from 2002 to 2009","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ministry of Health and Long Term Care; BC Centre for Disease Control; University of Toronto; Public Health Agency of Canada","funders":"European Commission; University of Oxford; Wellcome Trust; Wellcome","keywords":"Neisseria meningitidis; Microbiology; Serotype; Biology; Virology; Antigen; Neisseriaceae; Bacteria; Genetics; Antibiotics","score_opus":0.005138635494155586,"score_gpt":0.2218571293274334,"score_spread":0.21671849383327782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2231836204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99088633,0.0070596547,0.0000027823298,0.0015288373,0.00018017435,0.00022934497,0.00010767197,0.000001404038,0.0000037774482],"genre_scores_gemma":[0.99747276,0.0008427088,0.0000060711986,0.001574767,0.00004702914,0.000007380184,0.000039389146,0.0000074397153,0.0000024384383],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99831504,0.0007516224,0.00042659347,0.00015316396,0.000030251394,0.00032335825],"domain_scores_gemma":[0.99905676,0.00029691312,0.00016585359,0.0001367327,0.0001354657,0.00020829852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006418978,0.00014662762,0.00035199587,0.0002504332,0.0001312411,0.000023225037,0.00017161002,0.00010711189,0.00018361946],"category_scores_gemma":[0.0006827629,0.000079976264,0.000044343862,0.0006356483,0.00016976791,0.00006167237,0.000036817335,0.00034207664,6.7657663e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004330528,0.0001005749,0.8844403,0.000014507537,0.0002858986,0.0000258443,0.001983793,0.000057269066,0.11194927,0.000082612925,0.00018294508,0.00044391668],"study_design_scores_gemma":[0.00056130986,0.00043786192,0.9961724,0.000060259837,0.00024921563,0.00072601845,0.0006894747,0.0000071611976,0.00043855375,0.00001881343,0.00054104405,0.00009786502],"about_ca_topic_score_codex":0.4881608,"about_ca_topic_score_gemma":0.941129,"teacher_disagreement_score":0.45296827,"about_ca_system_score_codex":0.00007894563,"about_ca_system_score_gemma":0.0017570503,"threshold_uncertainty_score":0.5152476},"labels":[],"label_agreement":null},{"id":"W223296481","doi":"10.1155/2008/523021","title":"Characterization of Serogroup A <i>Neisseria meningitidis</i> from Invasive Meningococcal Disease Cases in Canada Between 1979 and 2006: Epidemiological Links to Returning Travellers","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"International Centre for Infectious Diseases; Public Health Agency of Canada","funders":"Sanofi Pasteur; European Commission; University of Oxford; Wellcome Trust; Sanofi","keywords":"Neisseria meningitidis; Meningococcal disease; Epidemiology; Neisseriaceae; Meningococcal Infections; Medicine; Microbiology; Disease; Virology; Biology; Antibiotics; Bacteria; Internal medicine","score_opus":0.009830608669278495,"score_gpt":0.22379060940434803,"score_spread":0.21396000073506954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W223296481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99591994,0.001718428,0.000112931295,0.00062824995,0.0007050314,0.00017588088,0.00072486344,0.0000059407826,0.00000874567],"genre_scores_gemma":[0.9987584,0.00024719178,0.000012147197,0.0005291589,0.000174649,0.00000419688,0.00025569162,0.000011598782,0.000006979854],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998236,0.000263586,0.00077781465,0.00024837625,0.000018754683,0.00045544564],"domain_scores_gemma":[0.99778396,0.0008529892,0.0003076977,0.00009346492,0.0001177296,0.0008441308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041441197,0.00020915215,0.00065301644,0.00029066965,0.00013496332,0.000012507846,0.000121259756,0.00035501263,0.00033494426],"category_scores_gemma":[0.0014134143,0.00017251505,0.00007531802,0.00017576628,0.0002385536,0.00006888223,0.00004042029,0.00048680752,0.0000014649678],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017757101,0.000025346682,0.8048706,0.000020605377,0.000116836556,0.00012424431,0.00014249087,0.0000016575976,0.19063628,0.00003082551,0.00016237683,0.0036911343],"study_design_scores_gemma":[0.0013297707,0.00042964992,0.98846084,0.00027418614,0.00012091593,0.00056300673,0.00024682263,6.8140633e-7,0.003260326,0.000068924426,0.005032849,0.00021204706],"about_ca_topic_score_codex":0.5905184,"about_ca_topic_score_gemma":0.8709175,"teacher_disagreement_score":0.28039908,"about_ca_system_score_codex":0.00019845828,"about_ca_system_score_gemma":0.0021828623,"threshold_uncertainty_score":0.7034959},"labels":[],"label_agreement":null},{"id":"W2233968541","doi":"10.3402/ijch.v75.29798","title":"Laboratory characterization of invasive<i>Haemophilus influenzae</i>isolates from Nunavut, Canada, 2000–2012","year":2016,"lang":"en","type":"article","venue":"International Journal of Circumpolar Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; Government of Nunavut; Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Serotype; Multilocus sequence typing; Haemophilus influenzae; Ampicillin; Typing; Amp resistance; Microbiology; Virology; Conjugate vaccine; Biology; Antibiotic resistance; Antibiotics; Hib vaccine; Pasteurellaceae; Genotype; Gene; Genetics","score_opus":0.01019455936853591,"score_gpt":0.2453034493666473,"score_spread":0.2351088899981114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2233968541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881482,0.0018001365,0.00034887565,0.0041533145,0.004481722,0.00007097326,0.00097005593,0.0000089890045,0.000017705892],"genre_scores_gemma":[0.9977194,0.0008917204,0.00002464535,0.0008083714,0.00039835402,0.0000014014666,0.00006920076,0.000013149858,0.00007372313],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99865234,0.00018898056,0.0007860717,0.00011856464,0.00007258657,0.00018148505],"domain_scores_gemma":[0.99775225,0.000185848,0.0010349039,0.00012230415,0.0008437752,0.00006091138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002698499,0.00012513055,0.00031968416,0.00017734706,0.00006547716,0.000013561869,0.00030150078,0.00011310512,0.00079617056],"category_scores_gemma":[0.00020395474,0.00009197071,0.00007405515,0.00008868032,0.00005015634,0.00043967442,0.00003666444,0.00017204585,0.000022677992],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015415208,0.00008220395,0.039372973,0.000008656395,0.00025560448,0.0000034902503,0.0001719718,7.0630955e-7,0.95285815,0.00017244995,0.0021380584,0.004781561],"study_design_scores_gemma":[0.002775739,0.00030760586,0.52088237,0.0005073419,0.000033531192,0.00022332925,0.000055917626,3.8390345e-7,0.28891504,0.00034214475,0.18574467,0.00021194086],"about_ca_topic_score_codex":0.040459774,"about_ca_topic_score_gemma":0.036201816,"teacher_disagreement_score":0.6639432,"about_ca_system_score_codex":0.00032801664,"about_ca_system_score_gemma":0.0028386891,"threshold_uncertainty_score":0.981385},"labels":[],"label_agreement":null},{"id":"W2234353692","doi":"10.1139/cjm-2015-0781","title":"Antigenic and genetic characterization of <i>Bordetella pertussis</i> recovered from Quebec, Canada, 2002–2014: detection of a genetic shift","year":2016,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Ste. Anne's Hospital; Public Health Agency of Canada","funders":"","keywords":"Bordetella pertussis; Pertactin; Serotype; Biology; Vaccination; Molecular epidemiology; Multilocus sequence typing; Virology; Whooping cough; Incidence (geometry); Microbiology; Pertussis toxin; Genotype; Bacteria; Genetics; Gene","score_opus":0.00474182910238183,"score_gpt":0.169375904382359,"score_spread":0.16463407527997717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2234353692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937146,0.0032484483,0.0003112069,0.00032062968,0.0015008079,0.000090927904,0.00080437487,0.0000023266546,0.0000066803364],"genre_scores_gemma":[0.99877936,0.0007975349,0.000036442478,0.000053157153,0.00007775558,0.0000011759021,0.00003558106,0.000012909858,0.0002060912],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998783,0.00019644231,0.00060472375,0.00015849301,0.000008659178,0.000248707],"domain_scores_gemma":[0.9989235,0.000091135196,0.0005556624,0.00015566683,0.00019314,0.000080938255],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007485774,0.00014336864,0.0004034393,0.00018805402,0.00007490848,0.000006177099,0.00014236575,0.00025094932,0.00096920226],"category_scores_gemma":[0.000056250094,0.000107559186,0.00007495634,0.00007905937,0.00018336522,0.000056769524,0.000014788234,0.00010929183,0.000009049531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007672297,0.000010138028,0.02042868,0.000007818945,0.0001489938,0.000004122534,0.00007224887,5.084367e-7,0.9677818,0.000002013233,0.00059779163,0.010869192],"study_design_scores_gemma":[0.0009177742,0.00021327227,0.40643257,0.000068454414,0.00007567363,0.00036879364,0.000020250565,1.9628038e-7,0.53639674,0.00001713519,0.055356566,0.000132559],"about_ca_topic_score_codex":0.63114434,"about_ca_topic_score_gemma":0.9723518,"teacher_disagreement_score":0.431385,"about_ca_system_score_codex":0.000101502126,"about_ca_system_score_gemma":0.0012492657,"threshold_uncertainty_score":0.99994403},"labels":[],"label_agreement":null},{"id":"W2234552080","doi":"10.1093/pch/19.2.91","title":"Immunization for meningococcal serogroup B: What does the practitioner need to know?","year":2014,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meningococcal disease; Immunization; Meningococcal vaccine; Routine immunization; Incidence (geometry); Intensive care medicine; Pediatrics; Schedule; Neisseria meningitidis; Vaccination; Immunology; Biology","score_opus":0.008586631573304316,"score_gpt":0.26396479931483335,"score_spread":0.25537816774152905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2234552080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6898402,0.012534256,0.04365069,0.22805078,0.019885724,0.004559389,0.00014867404,0.000532371,0.0007979321],"genre_scores_gemma":[0.9898644,0.0030399456,0.0005301454,0.0042447043,0.0012827511,0.00019290476,0.00042500958,0.000033538246,0.00038660344],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99885124,0.0002557501,0.00030776003,0.00022232422,0.000018531935,0.00034439572],"domain_scores_gemma":[0.9990121,0.00034956867,0.00018345151,0.00028117982,0.00012988025,0.00004382244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076972734,0.00013650591,0.00020456666,0.000116720614,0.0009527273,0.000093089795,0.00014784628,0.00014092097,0.00009564088],"category_scores_gemma":[0.00022025776,0.00008383304,0.000075618496,0.0003036957,0.00002431882,0.000235628,0.00006100972,0.00022116229,0.000143058],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014649278,0.0020636404,0.0366996,0.00058093824,0.00065715733,2.3378252e-7,0.017654596,0.0005092445,0.05029332,0.16946612,0.28524905,0.43536118],"study_design_scores_gemma":[0.0009986935,0.00040431318,0.010597305,0.000029434448,0.000035242687,0.000014596721,0.00061131525,0.000022490523,0.00086938904,0.00040359213,0.98584497,0.0001686679],"about_ca_topic_score_codex":0.0001956412,"about_ca_topic_score_gemma":0.00017733945,"teacher_disagreement_score":0.7005959,"about_ca_system_score_codex":0.00004945253,"about_ca_system_score_gemma":0.000057796613,"threshold_uncertainty_score":0.73277044},"labels":[],"label_agreement":null},{"id":"W2237169775","doi":"10.1128/jb.00343-15","title":"Structural, Functional, and Immunogenic Insights on Cu,Zn Superoxide Dismutase Pathogenic Virulence Factors from Neisseria meningitidis and Brucella abortus","year":2015,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; National Institute of General Medical Sciences; Brookhaven National Laboratory; Canadian Institutes of Health Research; U.S. Department of Energy; National Institute on Aging; National Institutes of Health; National Science Foundation","keywords":"Virulence; Biology; Neisseria meningitidis; Superoxide dismutase; Microbiology; Virulence factor; Epitope; Immune system; Bacteria; Antibody; Immunology; Biochemistry; Enzyme; Genetics; Gene","score_opus":0.02654657537848728,"score_gpt":0.238696193540013,"score_spread":0.21214961816152572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2237169775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907607,0.0061641927,0.000010981373,0.00011842753,0.002738197,0.000084505264,0.00008792027,0.000017417127,0.000017675808],"genre_scores_gemma":[0.9986967,0.00082775706,0.00004151415,0.00006614479,0.00018657347,0.0000025312631,0.00010470197,0.000018017923,0.00005610207],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986197,0.00029051924,0.00055658584,0.0002633612,0.000024236357,0.00024563758],"domain_scores_gemma":[0.99892837,0.00024447255,0.00037241558,0.00018665068,0.00016321536,0.0001048599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015234166,0.00026284874,0.00053473335,0.00017405857,0.00018092713,0.000045979566,0.00012659791,0.00030059376,0.0003577821],"category_scores_gemma":[0.00013046173,0.00018797861,0.00010084605,0.000081135215,0.00019649582,0.00027284064,0.00008832464,0.00037320665,0.000023362267],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007922639,0.000039766142,0.029654346,0.0000038840026,0.00027025375,0.00000847663,0.00047269012,0.000003838573,0.96759987,0.00012217587,0.00028755967,0.00074489246],"study_design_scores_gemma":[0.0033211138,0.0020763194,0.93483984,0.000057868805,0.00019097095,0.0016080799,0.0007789961,0.0000045956217,0.042998586,0.00095842005,0.012790302,0.0003748861],"about_ca_topic_score_codex":0.0002996735,"about_ca_topic_score_gemma":0.000053033615,"teacher_disagreement_score":0.92460126,"about_ca_system_score_codex":0.000049585313,"about_ca_system_score_gemma":0.00009908467,"threshold_uncertainty_score":0.76655453},"labels":[],"label_agreement":null},{"id":"W2240609136","doi":"10.1093/jpids/piv065","title":"The Health Burden of Invasive Meningococcal Disease: A Systematic Review","year":2015,"lang":"en","type":"review","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; SickKids Foundation; Hospital for Sick Children; Public Health Ontario; University of Toronto","funders":"","keywords":"Medicine; MEDLINE; Systematic review; Quality of life (healthcare); Disease; Case fatality rate; Incidence (geometry); Pediatrics; Meta-analysis; Epidemiology; Psychiatry; Internal medicine","score_opus":0.021675809181910397,"score_gpt":0.30938509253667995,"score_spread":0.28770928335476953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2240609136","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012255675,0.99467826,0.00000490859,0.00022392499,0.0028481288,0.0018451737,0.00024058498,0.00002235109,0.000014100503],"genre_scores_gemma":[0.00024298906,0.998348,0.0000018009172,0.000083270876,0.00087696954,0.00010383122,0.000025815398,0.000037941532,0.00027940192],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.995296,0.0019120356,0.0021152475,0.00019375443,0.00012610466,0.00035683624],"domain_scores_gemma":[0.99155635,0.001065328,0.005908907,0.0006531095,0.00067926035,0.00013706343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015903781,0.0004217957,0.0029634335,0.00008038849,0.0005912195,0.00004559523,0.00079486787,0.00023636439,0.00003991892],"category_scores_gemma":[0.001579682,0.00019181073,0.003795347,0.00072912016,0.00015488907,0.00009373411,0.00026432527,0.00079184823,0.000028828166],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018050874,0.00021568032,0.00033116317,0.8773415,0.0025342607,0.0000010677797,0.00015129893,0.0000028674244,6.585035e-7,0.000050072358,0.1149644,0.0043889834],"study_design_scores_gemma":[0.0010115531,0.0004946855,0.000023087421,0.2892569,0.04608697,0.0023664145,0.000154943,3.962171e-7,1.17656874e-7,0.0001628968,0.65994495,0.0004970755],"about_ca_topic_score_codex":0.000034839377,"about_ca_topic_score_gemma":0.0000032249181,"teacher_disagreement_score":0.5880846,"about_ca_system_score_codex":0.00043090997,"about_ca_system_score_gemma":0.0038156225,"threshold_uncertainty_score":0.7821815},"labels":[],"label_agreement":null},{"id":"W2241110687","doi":"10.1155/2015/963940","title":"The Role of Pediatricians as Key Stakeholders in Influencing Immunization Policy Decisions for the Introduction of Meningitis B Vaccine in Canada: The Ontario Perspective","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Ontario Medical Association","funders":"Ontario Medical Association; Novartis Pharmaceuticals Canada; American Academy of Pediatrics; Novartis","keywords":"Perspective (graphical); Immunization; Key (lock); Meningitis; Medicine; Political science; Family medicine; Public relations; Pediatrics; Immunology; Computer science; Computer security","score_opus":0.00954520153833081,"score_gpt":0.22321120754560167,"score_spread":0.21366600600727087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2241110687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9848865,0.010047365,0.00002473437,0.0039431415,0.0008129478,0.00019979443,0.000050255043,0.0000013134693,0.00003394577],"genre_scores_gemma":[0.99911016,0.00058987056,0.0000020052312,0.00008754593,0.00016846517,0.000007971223,0.000011263823,0.000005972965,0.000016719125],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897015,0.00018987265,0.0004824273,0.0000952483,0.00002157745,0.00024070396],"domain_scores_gemma":[0.99841684,0.0006731346,0.00028340926,0.00011941524,0.0004043646,0.00010282163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004705035,0.00009645422,0.0002560586,0.00022608736,0.00020419416,0.000010029405,0.00018058736,0.00010778611,0.00005654367],"category_scores_gemma":[0.0028580772,0.000053129188,0.000061009443,0.00027776728,0.00019025766,0.000049232083,0.000024371973,0.00029667746,3.2686344e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007799996,0.00014310196,0.9229497,0.000014613151,0.00058105745,0.000010331513,0.010737775,0.00093947357,0.015554154,0.009962712,0.0062600696,0.03206703],"study_design_scores_gemma":[0.00837241,0.0018213999,0.7110831,0.00017845932,0.00041651324,0.0025079923,0.058618747,0.000025028634,0.0018847627,0.0077039124,0.20702763,0.00036003583],"about_ca_topic_score_codex":0.9871855,"about_ca_topic_score_gemma":0.9984558,"teacher_disagreement_score":0.21186657,"about_ca_system_score_codex":0.00084577716,"about_ca_system_score_gemma":0.010195003,"threshold_uncertainty_score":0.9954163},"labels":[],"label_agreement":null},{"id":"W2242672992","doi":"10.1155/2002/891673","title":"Distribution of Serogroups of <i>Neisseria meningitidis</i> and Antigenic Characterization of Serogroup Y Meningococci in Canada, January 1, 1999 to June 30, 2001","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Canada; Canadian Science Centre for Human and Animal Health","funders":"","keywords":"Serotype; Neisseria meningitidis; Virology; Meningococcal disease; Serology; Incidence (geometry); Microbiology; Neisseriaceae; Biology; Medicine; Bacteria; Antibiotics; Immunology; Antibody; Genetics","score_opus":0.005287395940151837,"score_gpt":0.1931278890653595,"score_spread":0.18784049312520765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2242672992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952759,0.0028900648,0.00003791948,0.00030229412,0.0007282227,0.00014567304,0.0006033701,0.000002734134,0.000013786354],"genre_scores_gemma":[0.9988429,0.000869757,0.0000037365814,0.00007365393,0.000037786933,0.0000033613026,0.00014405494,0.000007655493,0.000017072047],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99870366,0.00014574379,0.0006900891,0.00014415222,0.000017903698,0.0002984803],"domain_scores_gemma":[0.99901634,0.00007885343,0.00037340177,0.00009251738,0.00016878877,0.00027012287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017851482,0.00014300138,0.0005442087,0.00022802799,0.000064150445,0.0000048407906,0.000098510776,0.00018242773,0.00061681453],"category_scores_gemma":[0.00018066572,0.00012773824,0.000063374864,0.00022851746,0.00020835953,0.00006785504,0.000027659951,0.00016995154,0.0000010310838],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071241826,0.00010312562,0.3703367,0.00008506559,0.00015382873,0.000010768725,0.0001561484,0.0000026663492,0.62341744,0.000072189934,0.0018128025,0.0037779873],"study_design_scores_gemma":[0.003239879,0.0012198053,0.9474302,0.0005217356,0.00019726141,0.0014889215,0.00023793738,0.00001000901,0.02403411,0.00003390934,0.02128116,0.00030510477],"about_ca_topic_score_codex":0.32771045,"about_ca_topic_score_gemma":0.5527074,"teacher_disagreement_score":0.59938335,"about_ca_system_score_codex":0.00010625657,"about_ca_system_score_gemma":0.00072112726,"threshold_uncertainty_score":0.6767664},"labels":[],"label_agreement":null},{"id":"W2247622889","doi":"10.1155/2001/839183","title":"The Role of the Aceullular Pertussis Vaccine and the Comeback of ′Pertussis Pete′?","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Queen Elizabeth II Health Sciences Centre; University of Toronto; University Health Network","funders":"","keywords":"Bordetella pertussis; Medicine; Whooping cough; Immunology; Pertussis vaccine; Vaccination; Serology; Immunity; Incidence (geometry); Pediatrics; Immunization; Antigen; Immune system; Antibody; Biology; Bacteria","score_opus":0.002907842566668829,"score_gpt":0.19078653589787342,"score_spread":0.1878786933312046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2247622889","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9545892,0.03955515,0.0000067328406,0.0045791185,0.00094935985,0.00012921494,0.000054148917,0.0000031724087,0.00013392439],"genre_scores_gemma":[0.9946355,0.004843309,8.715902e-7,0.00030453116,0.000096230535,0.0000037144166,0.0000045837023,0.000007711609,0.00010353023],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987311,0.00039580453,0.0004776657,0.000108598855,0.000018641696,0.0002681939],"domain_scores_gemma":[0.9985896,0.0005515581,0.0003285036,0.00018862731,0.0001808093,0.00016090601],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040452852,0.00013495632,0.00040609937,0.00008864932,0.00046680827,0.00001604406,0.00025749987,0.00019842657,0.00045147896],"category_scores_gemma":[0.000798827,0.000057590754,0.00018924908,0.00014816201,0.0012583085,0.00003578068,0.000062826024,0.00030632946,0.0000017721654],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009474452,0.00019119341,0.8140959,0.00005377371,0.0016476784,0.000014498288,0.00081567373,0.0000034463928,0.10393436,0.007168089,0.0066066696,0.06452124],"study_design_scores_gemma":[0.008216091,0.000810082,0.25643873,0.0002427282,0.00073312904,0.010028589,0.0012495887,0.00000930549,0.0030379307,0.002126525,0.7168493,0.00025799315],"about_ca_topic_score_codex":0.0049800193,"about_ca_topic_score_gemma":0.010661188,"teacher_disagreement_score":0.7102426,"about_ca_system_score_codex":0.000026048026,"about_ca_system_score_gemma":0.00046369171,"threshold_uncertainty_score":0.7528333},"labels":[],"label_agreement":null},{"id":"W2249253073","doi":"10.1155/2005/642315","title":"A Comparison of Pertussis Rates in the Northwest Territories: Pre‐ and Postacellular Pertussis Vaccine Introduction in Children and Adolescents","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Government of Northwest Territories","funders":"","keywords":"Bordetella pertussis; Medicine; Diphtheria; Pertussis vaccine; Whooping cough; Population; Booster dose; Pediatrics; Incidence (geometry); Tetanus; Immunization; Vaccination; Immunology; Environmental health; Antibody","score_opus":0.0035368322901152775,"score_gpt":0.2288097209039275,"score_spread":0.22527288861381223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2249253073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9833571,0.013629268,0.000003312444,0.0024290648,0.00035998624,0.00013571676,0.00008078905,0.000002782524,0.000002006476],"genre_scores_gemma":[0.9984261,0.0010906017,0.0000029308007,0.00015282481,0.0002518333,0.000003174555,0.00006184826,0.0000058727483,0.000004859332],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989405,0.0002239801,0.00044516948,0.00015451072,0.000012877589,0.00022295484],"domain_scores_gemma":[0.9994949,0.00007817061,0.00015596325,0.00007951363,0.00006211163,0.00012935017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022698566,0.00013095082,0.0003811571,0.0002873264,0.00010745387,0.000018300861,0.000088180226,0.00020139763,0.00010480768],"category_scores_gemma":[0.00023299565,0.000087803244,0.000041782605,0.0001239057,0.00024180111,0.00008113041,0.000021215612,0.000313878,5.9056174e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008256825,0.00015270144,0.98262626,0.000020265194,0.00006211015,0.000002861697,0.00060701964,0.0000019577603,0.008827407,0.000032278378,0.00040973027,0.0071748435],"study_design_scores_gemma":[0.0017743581,0.00042646524,0.98736733,0.000100248755,0.000065064836,0.0017608318,0.0002762429,0.000002845682,0.00027338043,0.000014496635,0.007846985,0.00009177361],"about_ca_topic_score_codex":0.021689001,"about_ca_topic_score_gemma":0.11288507,"teacher_disagreement_score":0.09119607,"about_ca_system_score_codex":0.000044359356,"about_ca_system_score_gemma":0.00019271042,"threshold_uncertainty_score":0.9848257},"labels":[],"label_agreement":null},{"id":"W2251017091","doi":"10.1080/21645515.2015.1091131","title":"Vaccines for the prevention of meningococcal capsular group B disease: What have we recently learned?","year":2015,"lang":"en","type":"review","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meningococcal disease; Meningococcal vaccine; Licensure; Outbreak; Disease; Group B; Incidence (geometry); Meningitis; Pediatrics; Psychological intervention; Immunology; Neisseria meningitidis; Internal medicine; Immunization; Virology; Immune system; Psychiatry","score_opus":0.1220242009201641,"score_gpt":0.3793184645597462,"score_spread":0.25729426363958213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2251017091","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029729877,0.9930466,0.0002207291,0.00020795138,0.0031791164,0.0027786382,0.0001324114,0.00011527838,0.000022010177],"genre_scores_gemma":[0.00031161302,0.9908549,0.000036953887,0.000034513476,0.0005106605,0.00070010376,0.0013702387,0.00019009548,0.0059908815],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99653965,0.0006021177,0.0015083194,0.00066847476,0.00006512443,0.00061628607],"domain_scores_gemma":[0.9964919,0.0004462664,0.0012632068,0.001295808,0.00045052564,0.00005227641],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008465867,0.0008698756,0.0020940267,0.00029915458,0.00063832453,0.00019486812,0.00089915446,0.00077675364,0.0007197848],"category_scores_gemma":[0.000051849012,0.0005808589,0.0012310963,0.0002998748,0.00010573101,0.00035693272,0.00021401825,0.0006153434,0.00007344129],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032988127,0.00044630835,0.00002131581,0.0038706819,0.0028883133,5.375039e-7,0.00024293341,0.000002289554,0.0020228208,0.0011761702,0.0027006255,0.98629814],"study_design_scores_gemma":[0.0020138929,0.0004616807,0.00005136601,0.0044417074,0.0040293713,0.00004063838,0.00021726733,0.0000027745461,0.00008750128,0.0007260991,0.9873364,0.000591299],"about_ca_topic_score_codex":0.000064911525,"about_ca_topic_score_gemma":0.000077407036,"teacher_disagreement_score":0.9857068,"about_ca_system_score_codex":0.00012916928,"about_ca_system_score_gemma":0.00024431705,"threshold_uncertainty_score":0.9996643},"labels":[],"label_agreement":null},{"id":"W2255008104","doi":"10.1038/ncomms10515","title":"A novel mechanism for the biogenesis of outer membrane vesicles in Gram-negative bacteria","year":2016,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":482,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Glycomics Centre; Canadian Institutes of Health Research; Austrian Science Fund","keywords":"Bacterial outer membrane; Biogenesis; Biology; Cell biology; Bacteria; Gram-negative bacteria; Vesicle; Microbiology; Periplasmic space; Bama; ATP-binding cassette transporter; Biochemistry; Transporter; Membrane; Escherichia coli; Genetics; Gene","score_opus":0.028448569333407787,"score_gpt":0.28648628060038045,"score_spread":0.25803771126697267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2255008104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95598286,0.0035920222,0.003357132,0.032729,0.0016352936,0.001214529,0.0011772693,0.000080004014,0.00023191283],"genre_scores_gemma":[0.99677414,0.0006215202,0.0021077183,0.000096951284,0.000023980425,0.00016206494,0.000030369849,0.000010001396,0.00017325686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994568,0.000090835754,0.00021221202,0.000108641594,0.000008357345,0.00012311523],"domain_scores_gemma":[0.99774635,0.001152365,0.000108489956,0.00081402,0.00017206174,0.0000066939488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017353395,0.000089007175,0.00015023281,0.00008133304,0.00017488052,0.00000709184,0.0005290836,0.00026267406,0.00006512605],"category_scores_gemma":[0.0002289154,0.00004849583,0.000078303165,0.00015265057,0.00013589999,0.00006770387,0.00014055349,0.00016439667,0.000013442915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045726058,0.00009142303,0.00032570743,0.000003187836,0.00008113469,8.036955e-9,0.00010107367,5.7295253e-8,0.92506707,0.07156407,0.00020315994,0.0025173696],"study_design_scores_gemma":[0.0019301656,0.00007665149,0.037409782,0.000058648562,0.000073068906,0.000010696618,0.00013329319,0.00000511224,0.8959066,0.0019605947,0.062292017,0.00014332726],"about_ca_topic_score_codex":0.00032084328,"about_ca_topic_score_gemma":0.0027045952,"teacher_disagreement_score":0.06960347,"about_ca_system_score_codex":0.000018386296,"about_ca_system_score_gemma":0.000025973617,"threshold_uncertainty_score":0.2025983},"labels":[],"label_agreement":null},{"id":"W2255877890","doi":"10.1155/2014/237560","title":"Safety and Immunogenicity of Two Doses of Quadrivalent Meningococcal Conjugate Vaccine or One Dose of Meningococcal Group C Conjugate Vaccine, both Administered Concomitantly with Routine Immunization to 12‐ to 18‐Month‐Old Children","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); McGill University Health Centre; Montreal Children's Hospital","funders":"Sanofi Pasteur; University of Toronto; European Society for Paediatric Infectious Diseases; Sanofi","keywords":"Immunogenicity; Conjugate; Meningococcal vaccine; Medicine; Conjugate vaccine; Immunization; Meningococcal meningitis; Virology; Neisseria meningitidis; Pediatrics; Immunology; Antigen; Biology; Mathematics","score_opus":0.00758516249454405,"score_gpt":0.2338374451171016,"score_spread":0.22625228262255756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2255877890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962696,0.0012307523,0.000709411,0.00043471507,0.00039266027,0.0004705839,0.000450895,0.000011611087,0.000029786255],"genre_scores_gemma":[0.99902505,0.000344339,0.000104127044,0.00026454817,0.00009348921,0.0000071560153,0.00010519014,0.000024498426,0.000031631957],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975947,0.00042853798,0.0012299877,0.00028946108,0.000037741716,0.00041958492],"domain_scores_gemma":[0.99778277,0.00033994604,0.0007274309,0.0002527839,0.000360314,0.00053678267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005458937,0.00030098227,0.0012018498,0.0003950627,0.00017507446,0.000015692522,0.00023408809,0.0002607872,0.00064574316],"category_scores_gemma":[0.00064077997,0.00022066486,0.00012629511,0.00023873056,0.00030603033,0.00008287115,0.00009997336,0.00028785033,0.0000018449201],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0078105796,0.000383414,0.42002136,0.00011198107,0.0013022308,0.000008624021,0.00045348285,0.000026024047,0.56430066,0.000785602,0.0003113751,0.0044846674],"study_design_scores_gemma":[0.02646918,0.017362202,0.9199499,0.0010407686,0.0009710979,0.0029465458,0.00020668676,0.000009327141,0.024618324,0.00005742485,0.00578267,0.0005858933],"about_ca_topic_score_codex":0.01143233,"about_ca_topic_score_gemma":0.023666676,"teacher_disagreement_score":0.5396823,"about_ca_system_score_codex":0.000067068984,"about_ca_system_score_gemma":0.00053221383,"threshold_uncertainty_score":0.9951506},"labels":[],"label_agreement":null},{"id":"W2264239501","doi":"10.1111/tid.12484","title":"High rate of vaccine failure after administration of acellular pertussis vaccine pre‐ and post‐liver transplantation in children at a children's hospital in Japan","year":2015,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Health, British Columbia; Ministry of Health, Labour and Welfare; National Center for Child Health and Development","keywords":"Medicine; Vaccination; Pertussis vaccine; Liver transplantation; Filamentous haemagglutinin adhesin; Pertussis toxin; Whooping cough; Pediatrics; Serology; Transplantation; Immunology; Internal medicine; Immunization; Antibody","score_opus":0.003083443245049615,"score_gpt":0.1897106403613584,"score_spread":0.1866271971163088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2264239501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972396,0.00088936026,0.000022465301,0.00012850178,0.00014007583,0.000644913,0.0008964594,0.000033274373,0.0000053486738],"genre_scores_gemma":[0.9977796,0.00070454215,0.000007688328,0.000017760902,0.000024428202,0.000059942406,0.0013606127,0.000018272249,0.000027171005],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987907,0.00018143097,0.0004702718,0.000306736,0.00002787044,0.00022302651],"domain_scores_gemma":[0.99949276,0.00004169406,0.00014133289,0.00017470075,0.00007629953,0.00007322306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015033867,0.00023718637,0.00037726,0.00027747953,0.000040694773,0.000008860529,0.0000697157,0.00018635616,0.00016884596],"category_scores_gemma":[0.000015582635,0.0002129658,0.00008177985,0.0001956288,0.00003801283,0.00020907234,0.0000146024295,0.00015363574,0.000008630006],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005215714,0.00067675684,0.94039404,0.00012941613,0.00012578037,0.000015316484,0.0010090636,0.000046523088,0.05213173,0.00007066941,0.000014975892,0.00016998932],"study_design_scores_gemma":[0.006405128,0.00079883,0.9743623,0.000119956356,0.00027054275,0.00019313786,0.000017725484,0.0000057255606,0.017560365,0.000038042006,0.0000068705585,0.0002213634],"about_ca_topic_score_codex":0.0026674278,"about_ca_topic_score_gemma":0.003240328,"teacher_disagreement_score":0.03457137,"about_ca_system_score_codex":0.00003784902,"about_ca_system_score_gemma":0.00006858505,"threshold_uncertainty_score":0.8684493},"labels":[],"label_agreement":null},{"id":"W2267210085","doi":"10.4049/jimmunol.190.supp.138.18","title":"Differences in both Toll-like receptor 4 and MD-2 account for the host-specific recognition of <i>Bordetella pertussis</i> lipid A (P1240)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"TLR4; Lipid A; Bordetella pertussis; Toll-like receptor; Lipopolysaccharide; Biology; Innate immune system; Receptor; Pattern recognition receptor; Mutagenesis; Microbiology; Biochemistry; Gene; Bacteria; Mutation; Immunology; Genetics","score_opus":0.02100826140911811,"score_gpt":0.2259202803014772,"score_spread":0.2049120188923591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2267210085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9777622,0.018093681,0.00008212076,0.0017485939,0.001931447,0.00031941436,0.000017366709,0.00000574844,0.000039388087],"genre_scores_gemma":[0.9758356,0.02370102,0.000053865006,0.000092650036,0.00011936659,0.000024914656,0.000004605285,0.0000101816995,0.0001577704],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988464,0.00031145557,0.0005190715,0.00009213141,0.000017266408,0.00021366602],"domain_scores_gemma":[0.9981338,0.0010296856,0.00044039375,0.00017692872,0.00020993964,0.000009259131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005352583,0.00013458285,0.00036251292,0.00012709117,0.00017265938,0.000020502568,0.00026638748,0.0001824083,0.00073065417],"category_scores_gemma":[0.00008959672,0.00006703935,0.00008851591,0.000106498075,0.00028796238,0.00013772264,0.000060467126,0.00032791597,0.00003039438],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007593686,0.00010436224,0.001144313,0.000008495385,0.00024279028,9.7182486e-8,0.0006234336,2.6926202e-7,0.9621922,0.00005449229,0.0043746503,0.030495575],"study_design_scores_gemma":[0.010516725,0.0063578654,0.44911343,0.00041953087,0.00045272545,0.0020466659,0.010199926,0.000014773639,0.19449735,0.0016183128,0.32409698,0.00066573126],"about_ca_topic_score_codex":0.00026114672,"about_ca_topic_score_gemma":0.000072741444,"teacher_disagreement_score":0.76769483,"about_ca_system_score_codex":0.00002052439,"about_ca_system_score_gemma":0.00003835354,"threshold_uncertainty_score":0.8000151},"labels":[],"label_agreement":null},{"id":"W2280940150","doi":"10.1093/ofid/ofv133.1420","title":"Rapid Adverse Event Following Immunization (AEFI) Surveillance Following a Mass Meningococcal B Vaccine Program in a University Setting: A Canadian Immunization Research Network (CIRN) Study","year":2015,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Immunization; Meningococcal vaccine; Adverse effect; Pediatrics; Neisseria meningitidis; Family medicine; Immunology; Antibody; Internal medicine","score_opus":0.024006022289411497,"score_gpt":0.30847276073586793,"score_spread":0.2844667384464564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2280940150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928713,0.0005418745,0.00012556407,0.0003218661,0.0013652099,0.002973743,0.00003744831,0.0001801448,0.0015828871],"genre_scores_gemma":[0.9985657,0.00003073111,0.00004222644,0.000042149168,0.000046073405,0.00015299907,0.00061445823,0.000040337894,0.00046532723],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964246,0.0016460286,0.00041075144,0.00048970466,0.000074498064,0.000954404],"domain_scores_gemma":[0.9987522,0.00016549845,0.00014385868,0.00048499304,0.00027518562,0.00017827557],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016776795,0.00026512175,0.00044143564,0.0004943664,0.0012991182,0.00017424645,0.00049261143,0.00020159285,0.00013416806],"category_scores_gemma":[0.0004513673,0.0002821235,0.00016135964,0.0017180492,0.000035154815,0.0006686194,0.00048782746,0.00038758604,0.00005597704],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031013333,0.0008523384,0.9893268,0.0000066169073,0.00033375772,0.00003641607,0.0005831549,0.000711596,0.00034680607,0.00016399809,0.0027948488,0.004533535],"study_design_scores_gemma":[0.020447312,0.0034011786,0.8155491,0.00025938154,0.00026744386,0.000033480195,0.01886467,0.00042774712,0.00006765335,0.00035671316,0.13916929,0.0011560634],"about_ca_topic_score_codex":0.12932199,"about_ca_topic_score_gemma":0.19674748,"teacher_disagreement_score":0.17377773,"about_ca_system_score_codex":0.0007577354,"about_ca_system_score_gemma":0.00075423135,"threshold_uncertainty_score":0.9999631},"labels":[],"label_agreement":null},{"id":"W2288012086","doi":"10.1016/s1701-2163(15)30627-7","title":"Update on Pertussis Vaccination in Pregnancy","year":2014,"lang":"en","type":"letter","venue":"Journal of Obstetrics and Gynaecology Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Calgary","funders":"","keywords":"Medicine; Immunization; Vaccination; Pregnancy; Pertussis vaccine; Advisory committee; Whooping cough; Pediatrics; Family medicine; Obstetrics; Immunology; Antibody; Political science","score_opus":0.0114570018192074,"score_gpt":0.21664363974448828,"score_spread":0.20518663792528088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288012086","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27410164,0.042208828,0.000030232279,0.49417403,0.1844084,0.00068252377,0.00016904339,0.000023418796,0.0042018797],"genre_scores_gemma":[0.8567081,0.0016663446,0.000029127375,0.13876463,0.00037411635,0.0000122787,0.00015384951,0.000049455943,0.0022420643],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99861497,0.00023678826,0.0006081782,0.00019403233,0.000040765586,0.00030524816],"domain_scores_gemma":[0.99726135,0.0016906462,0.00065692357,0.00015382683,0.00021332702,0.000023947352],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016254922,0.00022428086,0.000595434,0.0006171717,0.000096293006,0.000021041778,0.000191195,0.0009268407,0.0010843697],"category_scores_gemma":[0.0012074015,0.00017951896,0.00007854497,0.0002220585,0.00002283273,0.000058576432,0.00003473786,0.0016920138,0.000007439922],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000058310247,0.000053658416,0.006827119,0.000065864355,0.00018738031,0.0006958183,0.000020420877,0.000007929492,0.000046123452,0.00006510586,0.9196541,0.072370686],"study_design_scores_gemma":[0.0015807886,0.00036799983,0.062055025,0.000034099212,0.00006584226,0.000132678,0.000009837737,0.0000014887524,0.00006195159,0.00008681294,0.93541896,0.0001845035],"about_ca_topic_score_codex":0.008109274,"about_ca_topic_score_gemma":0.017639074,"teacher_disagreement_score":0.5826065,"about_ca_system_score_codex":0.00064618094,"about_ca_system_score_gemma":0.00062421634,"threshold_uncertainty_score":0.99982876},"labels":[],"label_agreement":null},{"id":"W2288439223","doi":"","title":"Risk factors for community-acquired bacterial meningitis in adults.","year":2015,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Meningitis; Bacterial meningitis; Dexamethasone; Risk factor; Neisseria meningitidis; Intensive care medicine; Disease; Antibiotics; Meningococcal meningitis; Immunology; Infectious disease (medical specialty); Pediatrics; Internal medicine; Bacteria; Microbiology; Biology","score_opus":0.04028004039323008,"score_gpt":0.2405511526841236,"score_spread":0.20027111229089353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288439223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555445,0.0000927044,0.000022982113,0.000055665292,0.0029046289,0.00064518827,0.00018136333,0.00007268289,0.00047031193],"genre_scores_gemma":[0.99807924,0.000013835483,0.000020168307,0.000009577218,0.000094319264,0.0009720441,0.00038307585,0.000014441471,0.0004133019],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989876,0.00031845563,0.00022141663,0.00012761816,0.000008019631,0.000336886],"domain_scores_gemma":[0.9994177,0.00019621928,0.00009104323,0.00019671465,0.00006195072,0.000036323003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048089924,0.000121679914,0.0002174019,0.0000983773,0.00016302218,0.000023064977,0.00013698013,0.0001783836,0.000075549426],"category_scores_gemma":[0.00048761425,0.00010603203,0.00006126256,0.000098857745,0.00004927544,0.00012359288,0.000060358307,0.00015090418,0.000022379661],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009571164,0.0022077928,0.5866296,0.00012346283,0.0009121508,0.000002038537,0.016813997,0.000020874078,0.060836602,0.0010231877,0.04181912,0.28004],"study_design_scores_gemma":[0.0068462626,0.00021445383,0.86336416,0.0000118544085,0.000036219415,0.000010197845,0.001079186,0.0000015443231,0.0207592,0.00034069605,0.10707432,0.00026189385],"about_ca_topic_score_codex":0.003450266,"about_ca_topic_score_gemma":0.00092665345,"teacher_disagreement_score":0.2797781,"about_ca_system_score_codex":0.00005267874,"about_ca_system_score_gemma":0.00001761477,"threshold_uncertainty_score":0.5215793},"labels":[],"label_agreement":null},{"id":"W2289360219","doi":"10.1097/md.0000000000002858","title":"Campylobacter Fetus Meningitis in Adults","year":2016,"lang":"en","type":"review","venue":"Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute of Natural and Integrative Medicine","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw","keywords":"Medicine; Campylobacter fetus; Campylobacter; Meningitis; Fetus; Microbiology; Pediatrics; Pregnancy; Bacteria","score_opus":0.02480130837304451,"score_gpt":0.3099305591416128,"score_spread":0.2851292507685683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2289360219","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022603606,0.99319917,0.0000035585974,0.00021518368,0.0035610017,0.00035781675,0.000052420444,0.000053144286,0.0023316795],"genre_scores_gemma":[0.00015376156,0.99383545,0.000002463457,0.00001992239,0.000522862,0.00008762524,0.00034826918,0.0000309084,0.004998764],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99852747,0.00019738315,0.0005940925,0.0003407705,0.000012672497,0.00032762712],"domain_scores_gemma":[0.9992277,0.00018646411,0.00020745679,0.00031990514,0.00003573581,0.000022707054],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020513854,0.00032462899,0.001472661,0.00033460156,0.00005083965,0.000003838472,0.00017823263,0.00052697136,0.007716975],"category_scores_gemma":[0.00011526593,0.00017424238,0.00014234087,0.00021945596,0.000108439686,0.00004050163,0.00006222648,0.00034391298,0.0018563061],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015638949,0.00002405601,0.000024889665,0.0014069505,0.00009533447,0.0000066911925,0.000057025733,7.1263173e-10,0.000094370094,0.00007839919,0.011106417,0.98709023],"study_design_scores_gemma":[0.0011101878,0.00013307124,0.00007151741,0.039389074,0.00012400326,0.0002227882,0.000007450855,3.8512717e-9,0.0000053275867,0.000013078389,0.9587351,0.00018839054],"about_ca_topic_score_codex":0.00039045652,"about_ca_topic_score_gemma":0.00011378643,"teacher_disagreement_score":0.9869018,"about_ca_system_score_codex":0.00008039932,"about_ca_system_score_gemma":0.000059378348,"threshold_uncertainty_score":0.99892086},"labels":[],"label_agreement":null},{"id":"W2293985875","doi":"10.1017/cjn.2015.317","title":"Diffuse Bacterial Meningitis and Myelitis Secondary to a Diplococcus Organism","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Children's Hospital of Winnipeg; University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"","keywords":"Myelitis; Organism; Medicine; Meningitis; Microbiology; Biology; Surgery; Spinal cord","score_opus":0.027956376951040803,"score_gpt":0.24871823948443486,"score_spread":0.22076186253339405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2293985875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99072766,0.0010763606,0.00001624851,0.0037537229,0.0031163932,0.00013209168,0.000031052645,0.000021753644,0.0011247196],"genre_scores_gemma":[0.9978408,0.00012237063,0.000431908,0.0011938253,0.0003284777,0.0000027678407,8.0197646e-7,0.0000106945035,0.00006835418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968798,0.0008101289,0.00067891163,0.00044044916,0.00012002824,0.0010706467],"domain_scores_gemma":[0.9973778,0.0002988094,0.00039814005,0.000116592084,0.00041733953,0.0013913098],"candidate_categories":["sts"],"consensus_categories":["sts"],"category_scores_codex":[0.0020782987,0.00028576454,0.00047972004,0.000760637,0.0020259318,0.00068080873,0.0010353186,0.00023538544,0.000540151],"category_scores_gemma":[0.0019732593,0.00019598707,0.00011401504,0.0007496997,0.0032265987,0.00080727506,0.00011969312,0.0008783098,0.000019640578],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083164213,0.00018498654,0.8798505,0.000017547167,0.00014604875,0.004967079,0.0061110607,0.00044095766,0.035578575,0.0029721325,0.02352093,0.045378547],"study_design_scores_gemma":[0.0035377115,0.20521471,0.37136188,0.00009992533,0.00014032492,0.1731952,0.0017806687,0.000039986422,0.0042908755,0.01930899,0.2197549,0.0012748315],"about_ca_topic_score_codex":0.0023685133,"about_ca_topic_score_gemma":0.049787745,"teacher_disagreement_score":0.5084886,"about_ca_system_score_codex":0.00013298342,"about_ca_system_score_gemma":0.0024356488,"threshold_uncertainty_score":0.999486},"labels":[],"label_agreement":null},{"id":"W2294908205","doi":"10.1099/jmmcr.0.005017","title":"Paediatric meningococcaemia in northwestern Ontario, Canada: a case for publicly funded meningococcal B vaccination","year":2015,"lang":"en","type":"article","venue":"JMM Case Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Lakehead University; NOSM University","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Ceftriaxone; Vaccination; Neisseria meningitidis; Pediatrics; Emergency department; Streptococcus pneumoniae; Meningitis; Meningococcal disease; Rash; Vomiting; Pneumonia; Immunology; Antibiotics; Internal medicine; Microbiology","score_opus":0.026559448360883885,"score_gpt":0.25596926005665765,"score_spread":0.22940981169577376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2294908205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962132,0.00024493184,0.0000661902,0.00012888387,0.002144545,0.00067870447,0.000023541654,0.000060434435,0.00043954243],"genre_scores_gemma":[0.9979795,0.0000010819978,0.00007135611,0.000037935162,0.00013005626,0.00026032832,0.0001714556,0.000021587848,0.0013266478],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9984154,0.000085667314,0.00064148416,0.00041909568,0.00002886229,0.00040946918],"domain_scores_gemma":[0.99889475,0.00010208989,0.00031992164,0.00032633706,0.00026810955,0.00008876691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057553576,0.00021219975,0.0003265649,0.00021294011,0.00017800451,0.000048059846,0.000038469425,0.00024394806,0.0002397865],"category_scores_gemma":[0.00013077943,0.00019975277,0.000075914475,0.00025641732,0.000009759167,0.0002281929,0.00006357551,0.00023652556,0.0000052340147],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005245093,0.0006064865,0.67185503,0.00009186903,0.0003711252,0.24577871,0.004613248,0.00010941218,0.0066919755,0.000290046,0.057952173,0.011115413],"study_design_scores_gemma":[0.0030389049,0.00028724046,0.01518645,0.000010392845,0.00010899431,0.8146828,0.001156003,0.000023270472,0.0021345902,0.00010668134,0.16278829,0.00047640203],"about_ca_topic_score_codex":0.98541164,"about_ca_topic_score_gemma":0.9991401,"teacher_disagreement_score":0.6566686,"about_ca_system_score_codex":0.0008675659,"about_ca_system_score_gemma":0.0012142456,"threshold_uncertainty_score":0.81456816},"labels":[],"label_agreement":null},{"id":"W2294913487","doi":"10.1159/000420996","title":"The Epidemiology of Bacterial Meningitis","year":2015,"lang":"en","type":"review","venue":"Antibiotics and chemotherapy/Antibiotica et chemotherapia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Victoria General Hospital","funders":"","keywords":"Bacterial meningitis; Epidemiology; Microbiology; Meningitis; Medicine; Biology; Pediatrics; Internal medicine","score_opus":0.053876748210029114,"score_gpt":0.3496697096642387,"score_spread":0.2957929614542096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2294913487","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015152465,0.9944643,0.00003392534,0.00051331305,0.0017698532,0.0007006139,0.00017558389,0.00008722673,0.0007399651],"genre_scores_gemma":[0.0018438222,0.9957859,0.00022181025,0.00012935007,0.0002372754,0.0000010263394,0.0003067261,0.00015336237,0.0013207524],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99615157,0.0008328846,0.0014792052,0.0007335711,0.00004963807,0.00075314875],"domain_scores_gemma":[0.9963631,0.0013407792,0.0011139509,0.0008818737,0.00021517636,0.00008509248],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018387458,0.0008284557,0.0029963015,0.0001774896,0.00033850374,0.000058064365,0.00057654246,0.0013028078,0.0003398721],"category_scores_gemma":[0.00020325143,0.0005254343,0.0006105876,0.00032777493,0.0009179503,0.00008174044,0.00018352177,0.00074100774,0.00007810826],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001188694,0.00023011139,0.00019065682,0.0019470273,0.0021195312,0.0000011901263,0.00020169016,6.9746676e-8,0.0021031192,0.007049962,0.0070155123,0.97902226],"study_design_scores_gemma":[0.0010749955,0.00029491025,0.00006831257,0.0016125725,0.00047245692,0.00020168058,0.000042721123,0.0000012822542,0.0015230579,0.0003878652,0.9937704,0.0005497331],"about_ca_topic_score_codex":0.000079876154,"about_ca_topic_score_gemma":0.000025670983,"teacher_disagreement_score":0.9867549,"about_ca_system_score_codex":0.000046205154,"about_ca_system_score_gemma":0.00028916192,"threshold_uncertainty_score":0.9999937},"labels":[],"label_agreement":null},{"id":"W2295267749","doi":"10.1371/journal.pone.0150721","title":"Predicted Strain Coverage of a New Meningococcal Multicomponent Vaccine (4CMenB) in Spain: Analysis of the Differences with Other European Countries","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Multilocus sequence typing; Meningococcal vaccine; Bacterial adhesin; Antigen; Typing; Neisseria; Microbiology; Biology; Strain (injury); Meningococcal disease; Neisseriaceae; Virology; Genetics; Genotype; Virulence; Bacteria; Gene","score_opus":0.025270993312680384,"score_gpt":0.20885953889706765,"score_spread":0.18358854558438728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2295267749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99885213,0.000065964836,0.00016268656,0.0003574943,0.00003239104,0.00016963821,0.0002225309,0.000015810328,0.00012134277],"genre_scores_gemma":[0.9992751,0.00004168896,0.000034426685,0.000016236396,0.000015440995,0.0000047759972,0.000012357948,0.000007860812,0.0005921488],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992084,0.00024356629,0.00026559306,0.00013085613,0.00002677227,0.00012482927],"domain_scores_gemma":[0.99942565,0.00012967018,0.00016861928,0.0002056927,0.00005891091,0.0000114311815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015123781,0.00009827958,0.00035297478,0.00012689822,0.000031842334,0.000004285483,0.00012559081,0.00005034558,0.00090390537],"category_scores_gemma":[0.000047980346,0.000046634028,0.000051063085,0.00025396046,0.00006421208,0.00003857748,0.00004365923,0.00006351022,0.0000052644914],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021553061,0.0004294733,0.3869684,0.000011937999,0.0014901382,1.2388051e-7,0.0002801877,0.000002535715,0.6102829,0.00007905562,0.000008395611,0.0002313138],"study_design_scores_gemma":[0.0019069904,0.00020354564,0.92909825,0.00024508324,0.0005896021,6.573399e-7,0.000031912114,0.000009880769,0.06762633,0.000010255556,0.00020566976,0.00007180832],"about_ca_topic_score_codex":0.00046745656,"about_ca_topic_score_gemma":0.00077286136,"teacher_disagreement_score":0.5426566,"about_ca_system_score_codex":0.000013434865,"about_ca_system_score_gemma":0.000024254212,"threshold_uncertainty_score":0.989713},"labels":[],"label_agreement":null},{"id":"W2296100335","doi":"10.1016/j.pmedr.2016.01.004","title":"Dynamics of naturally acquired antibody against Haemophilus influenzae type a capsular polysaccharide in a Canadian Aboriginal population","year":2016,"lang":"en","type":"article","venue":"Preventive Medicine Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"NOSM University; Lakehead University; York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Antibody; Immunology; Population; Haemophilus influenzae; Herd immunity; Medicine; Immunity; Immunization; Disease; Antigen; Immune system; Biology; Vaccination; Internal medicine; Environmental health; Microbiology","score_opus":0.008304771719219596,"score_gpt":0.2917559055072832,"score_spread":0.2834511337880636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2296100335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99601185,0.00086932105,0.00004168911,0.0008352138,0.0016393962,0.00028498357,0.00001920348,0.000024508747,0.00027385147],"genre_scores_gemma":[0.99893504,0.00013547619,0.000012557025,0.00003438131,0.00007024792,0.000008461733,0.00024341508,0.000013456082,0.00054695853],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986739,0.000111618814,0.00059637683,0.00026682133,0.00003268064,0.0003185879],"domain_scores_gemma":[0.9990989,0.000042430253,0.00034058475,0.0002600628,0.00020440613,0.00005364466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004133294,0.00015966242,0.00037886258,0.00038441562,0.00006301733,0.0000032789223,0.00007564088,0.00017695424,0.00026997706],"category_scores_gemma":[0.00031086177,0.00010683456,0.000053811396,0.00031444506,0.000101413825,0.00013890848,0.0000212726,0.00009547206,0.000008680383],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051128012,0.000033432687,0.45507726,0.000014885462,0.00007293473,0.000057884085,0.00010757664,0.0000015255163,0.5413149,0.00039315174,0.0000765393,0.00279875],"study_design_scores_gemma":[0.0010529778,0.0001969037,0.9848304,0.0004832195,0.0000632397,0.00036446808,0.00004502657,0.000007983837,0.007852847,0.0008401155,0.004071801,0.00019101365],"about_ca_topic_score_codex":0.26777798,"about_ca_topic_score_gemma":0.1614665,"teacher_disagreement_score":0.53346205,"about_ca_system_score_codex":0.00024177523,"about_ca_system_score_gemma":0.00025414038,"threshold_uncertainty_score":0.85383457},"labels":[],"label_agreement":null},{"id":"W2297188496","doi":"","title":"Serogroup C meningococcal conjugate vaccines: immunogenicity, immune persistence and induction of immunological memory","year":2014,"lang":"en","type":"dissertation","venue":"ResearchSpace (University of Auckland)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunogenicity; Medicine; Conjugate vaccine; Vaccination; Meningococcal vaccine; Herd immunity; Immunology; Toxoid; Tetanus; Booster dose; Pediatrics; Hib vaccine; Immunity; Immune system; Immunization","score_opus":0.0217016387246672,"score_gpt":0.24592534506830538,"score_spread":0.22422370634363817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2297188496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928816,0.004829248,0.000018053603,0.00017425825,0.00047563697,0.00032610443,0.00004732623,0.000043248405,0.0012045554],"genre_scores_gemma":[0.9827913,0.0035662942,0.00006977506,0.0000014726533,0.000028662558,0.0000015320251,0.0006381957,0.000019450667,0.012883301],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985081,0.00037687892,0.00028047583,0.000411707,0.000068430476,0.0003544279],"domain_scores_gemma":[0.99854326,0.0001722083,0.00044065507,0.00038211577,0.0004208852,0.000040856725],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00051444006,0.00026311,0.00075931964,0.00041266377,0.00038663863,0.000016410388,0.00039494893,0.00078884745,0.00086620986],"category_scores_gemma":[0.00010716152,0.00027029787,0.0002388631,0.00027948665,0.00036053784,0.00017690193,0.00022227869,0.0006998014,0.00004645993],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025343949,0.00016075975,0.0009770964,0.00034199608,0.00070447597,0.0000027128633,0.001807867,0.000001801812,0.9859605,0.00026270014,0.0004431941,0.0068025063],"study_design_scores_gemma":[0.014973697,0.0057663275,0.5956637,0.0017171198,0.0012306022,0.0002762238,0.08759104,0.000047913578,0.261503,0.00035394583,0.029077334,0.001799044],"about_ca_topic_score_codex":0.004060169,"about_ca_topic_score_gemma":0.0009720434,"teacher_disagreement_score":0.72445744,"about_ca_system_score_codex":0.000051600215,"about_ca_system_score_gemma":0.000118118165,"threshold_uncertainty_score":0.9999749},"labels":[],"label_agreement":null},{"id":"W2301584016","doi":"10.1159/000421011","title":"Sequelae of Acute Bacterial Meningitis in Children","year":2015,"lang":"en","type":"review","venue":"Antibiotics and chemotherapy/Antibiotica et chemotherapia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Bacterial meningitis; Medicine; Meningitis; Pediatrics; Intensive care medicine","score_opus":0.020400265628994243,"score_gpt":0.30809976047955273,"score_spread":0.2876994948505585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2301584016","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08740471,0.9092075,0.0000126798195,0.0001423666,0.0008211287,0.0011515674,0.00061351305,0.000102989994,0.000543497],"genre_scores_gemma":[0.013590653,0.98443604,0.00027571712,0.00007554393,0.00013801808,8.672727e-7,0.00086049375,0.00018228561,0.0004403785],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99693954,0.0003178121,0.0012111977,0.00082963856,0.00006433082,0.0006374831],"domain_scores_gemma":[0.9983201,0.00011327755,0.00069338817,0.000666144,0.00013060519,0.000076466225],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00059693493,0.0008926661,0.002949613,0.00046759407,0.00008829761,0.00008854751,0.00043639512,0.0014009181,0.0005697299],"category_scores_gemma":[0.000018945282,0.0007461187,0.00046880735,0.00051749154,0.00037290645,0.00013911295,0.00015752357,0.00074345537,0.000059387057],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024413849,0.0011612695,0.0029476774,0.0037519038,0.0077836667,0.000008015971,0.00061888475,1.410393e-7,0.02980788,0.0016906945,0.0024686512,0.9495171],"study_design_scores_gemma":[0.0048281634,0.0005741034,0.0011475349,0.00501955,0.0015389872,0.0008088555,0.000036498725,0.0000014364139,0.014497441,0.00019009956,0.96988046,0.001476876],"about_ca_topic_score_codex":0.00024112365,"about_ca_topic_score_gemma":0.000026097965,"teacher_disagreement_score":0.9674118,"about_ca_system_score_codex":0.00006944791,"about_ca_system_score_gemma":0.0002908007,"threshold_uncertainty_score":0.99989545},"labels":[],"label_agreement":null},{"id":"W2304962890","doi":"10.1093/ofid/ofu052.366","title":"658Assessment of Knowledge, Awareness, and Attitudes Towards Pertussis and Pertussis Immunization Strategies in Post-Partum Mothers","year":2014,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Tetanus; Immunization; Pregnancy; Diphtheria; Whooping cough; Family medicine; Incidence (geometry); Pediatrics; Public health; Vaccination; Nursing; Immunology; Antibody","score_opus":0.010349466796667664,"score_gpt":0.28888370941887975,"score_spread":0.2785342426222121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2304962890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940076,0.0018975276,0.00010669237,0.00024963013,0.00029714277,0.00030858314,0.000053481115,0.00004160977,0.0030377554],"genre_scores_gemma":[0.9989982,0.0005596253,0.00001666927,0.000053445605,0.000013703875,0.00006873709,0.000101309706,0.00001781618,0.00017049402],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990678,0.00019373423,0.0002517352,0.00025917302,0.000014923582,0.00021263008],"domain_scores_gemma":[0.9994479,0.00009925732,0.000108175154,0.00019621977,0.00011535608,0.000033097567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012617405,0.00018195213,0.00034564393,0.00015285995,0.00027534866,0.00014597898,0.00013203935,0.00011956439,0.0002358048],"category_scores_gemma":[0.000084357445,0.00015036427,0.000044770757,0.00015191104,0.00015923413,0.0004706785,0.00025600952,0.00008091435,0.0000076976285],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112107075,0.0006863208,0.94907904,0.000106307576,0.00017573904,2.3625462e-7,0.00040090707,0.000020407904,0.02181812,0.007153968,0.00031577516,0.020131083],"study_design_scores_gemma":[0.0015097101,0.0004565183,0.99060917,0.00009631224,0.000081526036,0.000017348642,0.0010309435,0.000041632476,0.0011972698,0.0007633898,0.0039731804,0.00022301711],"about_ca_topic_score_codex":0.0035863703,"about_ca_topic_score_gemma":0.0021984344,"teacher_disagreement_score":0.041530125,"about_ca_system_score_codex":0.000030630537,"about_ca_system_score_gemma":0.00015652938,"threshold_uncertainty_score":0.6131677},"labels":[],"label_agreement":null},{"id":"W2308222222","doi":"","title":"Impact of Conjugate Group C Meningococcal Vaccine on Invasive Meningococcal Disease in Vaccinated and Unvaccinated Groups in Ontario, Canada, 2000 to 2006","year":2008,"lang":"en","type":"article","venue":"46th Annual Meeting","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Neisseria meningitidis; Medicine; Virology; Vaccination; Conjugate vaccine; Conjugate; Immunology; Immunogenicity; Antibody; Immunization; Biology","score_opus":0.008805281457482389,"score_gpt":0.22740851579630852,"score_spread":0.21860323433882614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2308222222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983964,0.00024011939,0.0000013286643,0.00014061484,0.0002678372,0.00052953605,0.00016168474,0.00003303177,0.00022944195],"genre_scores_gemma":[0.9993736,0.00002048603,0.000017951017,0.00007759257,0.000029243207,0.000046170724,0.00015004122,0.000026482105,0.00025844565],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99792296,0.00025413674,0.000665923,0.00048439202,0.000041128227,0.00063145056],"domain_scores_gemma":[0.9990711,0.00026042128,0.0001815168,0.00020927818,0.00013103668,0.00014662258],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002823178,0.0003443098,0.0006016998,0.0004131671,0.0001733436,0.000011583892,0.00015782379,0.00018864422,0.00041539315],"category_scores_gemma":[0.00030683773,0.0003067188,0.000074403986,0.00048328517,0.000024844454,0.00016773312,0.00012563326,0.0004914612,0.0000117540485],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002371595,0.000277787,0.9118281,0.000016774049,0.00008187424,0.00007591412,0.001771404,0.00053200877,0.08078996,0.00003636918,0.0019717745,0.00024646425],"study_design_scores_gemma":[0.0037134583,0.00086410483,0.9892046,0.00018946955,0.000019728814,0.000050864623,0.00017975732,0.000013713877,0.004817603,0.000014142889,0.0006109202,0.0003216788],"about_ca_topic_score_codex":0.95050323,"about_ca_topic_score_gemma":0.9670103,"teacher_disagreement_score":0.077376485,"about_ca_system_score_codex":0.0006123517,"about_ca_system_score_gemma":0.0007847099,"threshold_uncertainty_score":0.9999385},"labels":[],"label_agreement":null},{"id":"W2314221612","doi":"10.1097/inf.0b013e31820e8638","title":"Effectiveness of Serogroup C Meningococcal Conjugate Vaccine","year":2011,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre hospitalier universitaire de Québec; Institut National de Santé Publique du Québec; Université Laval","funders":"","keywords":"Medicine; Meningococcal vaccine; Vaccination; Immunization; Meningococcal disease; Incidence (geometry); Conjugate vaccine; Booster dose; Neisseria meningitidis; Outbreak; Pediatrics; Logistic regression; Immunology; Internal medicine; Virology; Antibody","score_opus":0.012119917201715246,"score_gpt":0.22926536227964162,"score_spread":0.21714544507792638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2314221612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99521774,0.001229094,0.00029665112,0.000020502508,0.002185044,0.00024549864,0.000018199431,0.000065079825,0.0007221945],"genre_scores_gemma":[0.9991024,0.00040203345,0.000008617373,0.000014192481,0.0003561203,0.000022389082,0.000006224241,0.00001953061,0.00006850173],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984735,0.00065293803,0.00038551487,0.0001531144,0.000027793558,0.0003071175],"domain_scores_gemma":[0.9989053,0.0002704453,0.0003031458,0.00023937823,0.00020624376,0.00007550424],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00081230595,0.00018708056,0.00028474847,0.00017713898,0.000442676,0.000021524265,0.00020488042,0.00010665383,0.0012852334],"category_scores_gemma":[0.00014176437,0.00011904092,0.00021936458,0.00027968836,0.00006193322,0.00014498162,0.00007824686,0.00041056357,0.00014721922],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017581477,0.00069301383,0.95784503,0.000115658615,0.000432748,0.000009149103,0.00031825918,0.000019961757,0.036175814,0.0012053153,0.00080512266,0.00062176085],"study_design_scores_gemma":[0.003221653,0.00058063504,0.9844532,0.00002974306,0.00083596096,0.0010567168,0.00004352794,0.000002852357,0.0055280733,0.0034390187,0.00056555815,0.00024304505],"about_ca_topic_score_codex":0.00012178825,"about_ca_topic_score_gemma":0.0000043833606,"teacher_disagreement_score":0.030647742,"about_ca_system_score_codex":0.00003497553,"about_ca_system_score_gemma":0.00010769143,"threshold_uncertainty_score":0.9996277},"labels":[],"label_agreement":null},{"id":"W2314310145","doi":"10.1136/sextrans-2011-050108.45","title":"P1-S1.45 <i>Neisseria gonorrhoeae</i>antimicrobial susceptibility in Latin America and the Caribbean (2000–2009) - a contribution to the treatment guidelines revision","year":2011,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Neisseria gonorrhoeae; Etest; Medicine; Penicillin; Agar dilution; Antibiotic resistance; Ciprofloxacin; Azithromycin; Microbiology; Antimicrobial; Veterinary medicine; Antibiotics; Biology; Minimum inhibitory concentration","score_opus":0.02203989398274455,"score_gpt":0.2654270013112031,"score_spread":0.24338710732845856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2314310145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909375,0.00067528355,0.0019779664,0.0032112042,0.0012056496,0.0014510333,0.00018300778,0.00013000645,0.00022839746],"genre_scores_gemma":[0.99768305,0.0008456506,0.00011746025,0.00054259563,0.00012141688,0.00016635658,0.00019821596,0.000020672476,0.00030460276],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99793494,0.0005863077,0.0006356138,0.00042590362,0.000013897971,0.0004033324],"domain_scores_gemma":[0.9989179,0.00022775248,0.000119840035,0.00047119436,0.00022048532,0.000042879677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040641104,0.0002989812,0.00041993902,0.00015999177,0.0006916057,0.000052455438,0.00015742794,0.00021587197,0.00062729226],"category_scores_gemma":[0.0001679799,0.00017270952,0.00013726614,0.000670612,0.0002777246,0.00012734352,0.000034606575,0.00030197538,0.00018427442],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0063087065,0.005994642,0.093857005,0.0000826514,0.0017411469,0.0000031279242,0.039451748,0.00036590543,0.6130896,0.005975436,0.02400208,0.20912792],"study_design_scores_gemma":[0.008713993,0.0021394822,0.11674075,0.00008485316,0.00040975033,0.00012386442,0.00075977505,0.00006807337,0.008381498,0.00025084824,0.8617456,0.000581544],"about_ca_topic_score_codex":0.012191499,"about_ca_topic_score_gemma":0.013120193,"teacher_disagreement_score":0.83774346,"about_ca_system_score_codex":0.00010088384,"about_ca_system_score_gemma":0.00010318628,"threshold_uncertainty_score":0.9943864},"labels":[],"label_agreement":null},{"id":"W2316405567","doi":"10.1139/cjm-2013-0040","title":"Real-time polymerase chain reaction for detection of encapsulated <i>Haemophilus influenzae</i> using degenerate primers to target the capsule transport gene <i>bexA</i>","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Polymerase chain reaction; Haemophilus influenzae; Microbiology; Biology; Gene; Serotype; Haemophilus; Real-time polymerase chain reaction; Bacterial capsule; Bacteria; Meningitis; Virology; Molecular biology; Genetics; Antibiotics; Medicine","score_opus":0.011023222370570646,"score_gpt":0.21142962793180403,"score_spread":0.20040640556123338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2316405567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99605554,0.0007482405,0.00036662084,0.0003765717,0.0016591732,0.0004962913,0.00026784564,0.000009910207,0.000019792893],"genre_scores_gemma":[0.9987404,0.000035488167,0.00048360345,0.00024216065,0.00016712675,0.000013619199,0.00010231853,0.0000266864,0.00018862223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850106,0.00019468174,0.0006670447,0.00018702987,0.0000094013985,0.00044077565],"domain_scores_gemma":[0.99873275,0.0000504263,0.00043846222,0.00019593516,0.00045386876,0.00012853992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037067162,0.000199644,0.0004212999,0.00034050955,0.00030395525,0.000012224234,0.00020634646,0.0003277269,0.00025598967],"category_scores_gemma":[0.000050947634,0.00015459549,0.0001772372,0.00024254496,0.00014931487,0.00012474591,0.000009130352,0.00022070302,0.00003074516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109859546,0.000019154859,0.00013363571,0.000006772051,0.00019593585,0.000002434812,0.0002213642,0.00016025033,0.9977062,0.000009074495,0.00075871235,0.0006766538],"study_design_scores_gemma":[0.0009082678,0.00035616747,0.001393961,0.000022468968,0.00010014864,0.0016048574,0.00006469015,0.000008359054,0.9772389,0.000022696942,0.01811715,0.0001623189],"about_ca_topic_score_codex":0.032430355,"about_ca_topic_score_gemma":0.003934229,"teacher_disagreement_score":0.028496128,"about_ca_system_score_codex":0.00013533214,"about_ca_system_score_gemma":0.00056363404,"threshold_uncertainty_score":0.9740128},"labels":[],"label_agreement":null},{"id":"W2317409062","doi":"10.1097/xeb.0000000000000048","title":"Control of invasive meningococcal disease","year":2015,"lang":"en","type":"article","venue":"International Journal of Evidence-Based Healthcare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Medicine; Meningococcal vaccine; Carriage; Meningococcal disease; Vaccination; Immunization; European union; Disease; Pediatrics; Conjugate vaccine; Meningitis; Incidence (geometry); Immunology; Internal medicine; Immune system; Biology","score_opus":0.15335098889336715,"score_gpt":0.37127161214717996,"score_spread":0.2179206232538128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2317409062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9560798,0.006284192,0.0014780739,0.031239588,0.004645152,0.00015347752,0.00008697066,0.00001260852,0.000020184003],"genre_scores_gemma":[0.9987619,0.00014453528,0.000088094064,0.00059516303,0.0003360854,0.000005238583,0.000013086988,0.000007352812,0.00004854554],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878997,0.00027763264,0.0006019503,0.00010140798,0.00009236917,0.00013669358],"domain_scores_gemma":[0.9961681,0.00046014562,0.0006104939,0.000112501344,0.002537161,0.000111618436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005498905,0.000100448,0.00026008196,0.00023048671,0.000037420737,0.000016573544,0.0003168463,0.00008934173,0.00020409003],"category_scores_gemma":[0.0015402087,0.00007154235,0.00015563158,0.00008063551,0.00007698375,0.0002901208,0.00002686039,0.00022193209,0.000028048826],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01919077,0.0008174405,0.6904243,0.00019508592,0.0011695969,0.0001376515,0.0008039975,0.0012602165,0.24847718,0.006200739,0.014087476,0.017235547],"study_design_scores_gemma":[0.05086769,0.012773373,0.47120216,0.016608555,0.0008863164,0.0016019273,0.0022043944,0.00025873087,0.25650486,0.009016791,0.1765771,0.0014980682],"about_ca_topic_score_codex":0.0003411225,"about_ca_topic_score_gemma":0.000043363423,"teacher_disagreement_score":0.21922214,"about_ca_system_score_codex":0.00013766688,"about_ca_system_score_gemma":0.0013328358,"threshold_uncertainty_score":0.29174122},"labels":[],"label_agreement":null},{"id":"W2319131340","doi":"10.1038/nmicrobiol.2016.9","title":"Slam is an outer membrane protein that is required for the surface display of lipidated virulence factors in Neisseria","year":2016,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Bacterial outer membrane; Virulence; Neisseria; Neisseria meningitidis; Biology; Microbiology; Virulence factor; Membrane protein; Gene; Cell biology; Genome; Escherichia coli; Bacteria; Genetics; Membrane","score_opus":0.01695091724304599,"score_gpt":0.26382017544921676,"score_spread":0.24686925820617078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2319131340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99374557,0.00093817356,0.00007923877,0.0019067535,0.0016110775,0.0007690952,0.00089816574,0.00003800884,0.000013944266],"genre_scores_gemma":[0.9976847,0.00008238745,0.00006076314,0.0002881137,0.000049731112,0.000034751185,0.00017512254,0.000022735701,0.001601682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99858,0.00021303476,0.00034830108,0.00043891236,0.0000074214668,0.00041232898],"domain_scores_gemma":[0.99887806,0.0003002819,0.00020949505,0.00047436752,0.00012092688,0.000016883347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002592024,0.00026028184,0.00043445936,0.000088456174,0.00012544189,0.000010646495,0.0004032939,0.0011052676,0.00084745703],"category_scores_gemma":[0.000079465804,0.00013183455,0.00012744335,0.00015808048,0.00022999749,0.00016088241,0.00008465282,0.00034321356,0.00004199622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044977592,0.0000919764,0.004078604,0.000018637294,0.00013258983,1.7058971e-7,0.00034944256,2.8592737e-7,0.99237406,0.00024706448,0.0017506484,0.0005067247],"study_design_scores_gemma":[0.0014162741,0.00026274298,0.006524108,0.000055513836,0.000032669108,0.000024740459,0.000065333195,7.77735e-7,0.9191174,0.000059781174,0.07225839,0.00018230929],"about_ca_topic_score_codex":0.00021185902,"about_ca_topic_score_gemma":0.0003076448,"teacher_disagreement_score":0.073256716,"about_ca_system_score_codex":0.000031105603,"about_ca_system_score_gemma":0.00004386473,"threshold_uncertainty_score":0.92790604},"labels":[],"label_agreement":null},{"id":"W2320605748","doi":"10.1503/cmaj.140896","title":"The resurgence of pertussis","year":2015,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Whooping cough; Bordetella pertussis; Medicine; Pediatrics; Immunology; Bacteria; Biology; Vaccination","score_opus":0.013541209697310177,"score_gpt":0.2385074034847464,"score_spread":0.2249661937874362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320605748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9352406,0.0020462966,0.000028761,0.046666693,0.008442336,0.000058173042,0.000020487296,0.0000120586665,0.007484567],"genre_scores_gemma":[0.99683917,0.00018864356,0.0000052982,0.00047968715,0.00032772397,0.000001565029,0.0000032248706,0.000003297929,0.0021513908],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99930817,0.00018326001,0.00021701182,0.000040791525,0.00005921859,0.00019156358],"domain_scores_gemma":[0.9991138,0.00016358822,0.00012447515,0.000055494584,0.00034701874,0.00019564145],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001543281,0.00003741377,0.00008328422,0.000043690234,0.00026272555,0.000020399364,0.00012689753,0.00019612518,0.0015142331],"category_scores_gemma":[0.0026350142,0.000023470096,0.000042870615,0.00009444613,0.000036689897,0.000040442377,0.00000823588,0.00031048077,0.00016415432],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001877163,0.000017444612,0.062057495,9.302892e-7,0.00015426864,0.000005546174,0.0002867537,8.5537664e-7,0.0011866656,0.0013817052,0.8837485,0.051141072],"study_design_scores_gemma":[0.0003058772,0.00002911445,0.015374189,0.00000751585,0.000006587769,0.00015444968,0.00028855752,0.000002075165,0.0002325367,0.00014794881,0.98341954,0.000031602143],"about_ca_topic_score_codex":0.003982009,"about_ca_topic_score_gemma":0.02097139,"teacher_disagreement_score":0.09967105,"about_ca_system_score_codex":0.000163681,"about_ca_system_score_gemma":0.001465989,"threshold_uncertainty_score":0.9993985},"labels":[],"label_agreement":null},{"id":"W2320791681","doi":"10.14740/ijcp236w","title":"Salmonella Meningitis Presenting With Multiple Microabscesses in the Brain in a Young Infant: A Case Report","year":2016,"lang":"en","type":"article","venue":"International Journal of Clinical Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Meningitis; Antibiotics; Salmonella; Pediatrics; Microbiology; Bacteria; Biology","score_opus":0.03243797949129538,"score_gpt":0.35663912895088057,"score_spread":0.32420114945958517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320791681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945493,0.00020754652,0.00023828255,0.0026276566,0.002036066,0.00008294817,0.0000139091235,0.0000052694063,0.00023906994],"genre_scores_gemma":[0.99864125,0.00023334986,0.00013916579,0.000060533846,0.0007313494,0.000003690566,0.0000040832865,0.00000761917,0.00017895187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980805,0.00029263482,0.0012636763,0.00014412771,0.00006569056,0.00015339433],"domain_scores_gemma":[0.9954938,0.0032210376,0.00081094744,0.00011679422,0.00033834577,0.000019023515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020532776,0.00009504302,0.00026077105,0.00024329478,0.000036681944,0.000037544734,0.0002905895,0.0001383631,0.00006526407],"category_scores_gemma":[0.0045529194,0.00004888223,0.00011713024,0.00017078016,0.00007050063,0.00021180358,0.00006087466,0.00038538393,0.000009285609],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039588028,0.0002576128,0.9844015,0.0000032149514,0.000070138456,0.009191903,0.00021737147,0.000008103112,0.001937916,0.000029686042,0.001535578,0.0019510449],"study_design_scores_gemma":[0.00788,0.00036451765,0.7756843,0.00010911325,0.000058226466,0.19685844,0.0003383483,0.000005828324,0.00066305907,0.00027302408,0.017565245,0.00019989288],"about_ca_topic_score_codex":0.00054098497,"about_ca_topic_score_gemma":0.0019071843,"teacher_disagreement_score":0.20871724,"about_ca_system_score_codex":0.000026339647,"about_ca_system_score_gemma":0.00011920113,"threshold_uncertainty_score":0.54505986},"labels":[],"label_agreement":null},{"id":"W2321305144","doi":"10.1093/ofid/ofu052.1299","title":"1753Adherence to New Treatment Guidelines for Uncomplicated Anogenital and Pharyngeal Neisseria Gonorrhea Cases in Adults in Alberta, Canada","year":2014,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services","funders":"","keywords":"Gonorrhea; Medicine; Neisseria gonorrhoeae; Gonococcal infection; Neisseria; Pediatrics; Family medicine; Sexually transmitted disease; Microbiology; Syphilis; Human immunodeficiency virus (HIV)","score_opus":0.024497583221038635,"score_gpt":0.2971308709228343,"score_spread":0.2726332877017957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321305144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958372,0.00032132975,0.000022389215,0.0013227304,0.00050254556,0.0012462059,0.00019778786,0.000023865401,0.00052594545],"genre_scores_gemma":[0.9975036,0.000034081833,0.000032353524,0.0004802075,0.000045650377,0.00041100138,0.0002634798,0.00001834589,0.0012113034],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988429,0.00006574204,0.00033806352,0.00038096908,0.000008923566,0.00036338784],"domain_scores_gemma":[0.9993092,0.00024168708,0.00006885584,0.00019769957,0.00008867176,0.000093901705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000044829703,0.00022482156,0.00036224138,0.00010105714,0.00014962831,0.000065006214,0.00014764692,0.00007841732,0.00014360552],"category_scores_gemma":[0.0002923569,0.00019450152,0.00004264476,0.00018440941,0.000020423216,0.00016358317,0.00010873225,0.000045867553,0.000022589342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001979214,0.0010321627,0.8318211,0.00004386649,0.00014441412,0.0000032780588,0.00016511958,0.00012621896,0.006268781,0.00083657313,0.07037434,0.08720493],"study_design_scores_gemma":[0.02073094,0.006222146,0.49739197,0.00038472173,0.00015934063,0.00031363303,0.000432488,0.00013169133,0.0053965882,0.0012597318,0.46627071,0.0013060265],"about_ca_topic_score_codex":0.9496313,"about_ca_topic_score_gemma":0.98741156,"teacher_disagreement_score":0.39589638,"about_ca_system_score_codex":0.00015535958,"about_ca_system_score_gemma":0.00036045056,"threshold_uncertainty_score":0.79315424},"labels":[],"label_agreement":null},{"id":"W2321991585","doi":"10.1097/ccm.0000000000000901","title":"Cerebral Perfusion Pressure–Targeted Therapy Versus Intracranial Pressure–Targeted Therapy in Acute Meningitis","year":2015,"lang":"en","type":"letter","venue":"Critical Care Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Cerebral perfusion pressure; Intracranial pressure; Meningitis; Intensive care medicine; Perfusion; Anesthesia; Internal medicine; Surgery","score_opus":0.02669649794467761,"score_gpt":0.3003762663065297,"score_spread":0.2736797683618521,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321991585","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27883863,0.1963608,0.000048924445,0.46575737,0.05070881,0.0026862833,0.0016906607,0.0007730492,0.003135476],"genre_scores_gemma":[0.9212798,0.002603247,0.00008031481,0.050361834,0.012381652,0.0003064902,0.009694522,0.00025716878,0.0030350005],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.996114,0.0008660551,0.00082150864,0.000969501,0.00016828522,0.0010606205],"domain_scores_gemma":[0.9975663,0.00064626767,0.00014657865,0.0007195205,0.0008194144,0.00010194111],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00035755942,0.0008160252,0.0014243581,0.0004133982,0.0002660122,0.000050178256,0.0005416093,0.0025967776,0.009421317],"category_scores_gemma":[0.0005824476,0.0006134536,0.00022065714,0.0003367066,0.0007048381,0.00017663979,0.00013703939,0.0032041175,0.00013929469],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003732615,0.00016168399,0.0005455779,0.00017797513,0.00089494244,0.00027219145,0.0022074042,9.826439e-7,0.07089618,0.000083578314,0.9078166,0.0132102575],"study_design_scores_gemma":[0.013928018,0.0039989585,0.0013223881,0.00023826025,0.00057534984,0.0001623943,0.00039771877,0.000006125902,0.0038467143,0.00011346385,0.97470534,0.0007052494],"about_ca_topic_score_codex":0.0013156743,"about_ca_topic_score_gemma":0.00007374345,"teacher_disagreement_score":0.64244115,"about_ca_system_score_codex":0.00009642531,"about_ca_system_score_gemma":0.00021935254,"threshold_uncertainty_score":0.9996317},"labels":[],"label_agreement":null},{"id":"W2322774127","doi":"10.1139/cjm-2013-0156","title":"Population genetics of <i>Haemophilus influenzae</i> serotype a in three Canadian provinces","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Ste. Anne's Hospital; Manitoba Health; Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Multilocus sequence typing; Serotype; Biology; Haemophilus influenzae; Virology; Polymerase chain reaction; Genetics; clone (Java method); Phylogenetic tree; Microbiology; Pathogen; Typing; Population; Genotype; Bacteria; Gene; Medicine","score_opus":0.01212405935694533,"score_gpt":0.21263939531007722,"score_spread":0.2005153359531319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322774127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99511003,0.002691517,0.0000036897839,0.0004972276,0.0011864163,0.00020603201,0.0000672523,0.0000028326388,0.00023499398],"genre_scores_gemma":[0.99955165,0.000029408502,0.00007627791,0.00016361846,0.00005820903,0.0000036593442,0.000043286367,0.000010438107,0.000063444204],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881864,0.00011256324,0.0005525174,0.0001172216,0.000005503275,0.00039353597],"domain_scores_gemma":[0.9991717,0.000037624268,0.00026988087,0.00014042207,0.00025036852,0.0001300105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001817237,0.00013030878,0.00035206595,0.000629976,0.000085644075,0.000013985514,0.00022608489,0.00032828446,0.00086400926],"category_scores_gemma":[0.000066841305,0.00011486568,0.00007169743,0.00018920832,0.00012937594,0.000106794214,0.000011632394,0.00026546317,0.000081574166],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021930751,0.000017160166,0.5151391,0.000012797562,0.00008157275,0.00000767208,0.0001805989,0.000056600908,0.4769464,0.00023073812,0.0032472918,0.004058138],"study_design_scores_gemma":[0.0015743967,0.0006295948,0.90510535,0.00010908452,0.000047039124,0.0015836095,0.00013968504,0.0000033094427,0.016710745,0.001193683,0.07258564,0.00031788085],"about_ca_topic_score_codex":0.75522524,"about_ca_topic_score_gemma":0.97506255,"teacher_disagreement_score":0.4602357,"about_ca_system_score_codex":0.00019107625,"about_ca_system_score_gemma":0.001276962,"threshold_uncertainty_score":0.94602954},"labels":[],"label_agreement":null},{"id":"W2323947231","doi":"10.1139/w11-017","title":"Nonencapsulated or nontypeable<i>Haemophilus influenzae</i>are more likely than their encapsulated or serotypeable counterparts to have mutations in their fucose operon","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Health Canada","keywords":"Housekeeping gene; Haemophilus influenzae; Operon; Biology; Multilocus sequence typing; Genetics; Gene; Microbiology; Genotype; Mutant; Bacteria","score_opus":0.03504402931179403,"score_gpt":0.24187307164239044,"score_spread":0.2068290423305964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2323947231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571633,0.0009237839,0.000024081013,0.00043290923,0.0017759646,0.00042766036,0.0004805681,0.000023121996,0.00019557335],"genre_scores_gemma":[0.9979579,0.000052878597,0.00009596994,0.00064741366,0.00008229935,0.000015900956,0.00012285146,0.000042002895,0.0009827807],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976924,0.00030522628,0.0008655824,0.00033951664,0.000011729598,0.0007855683],"domain_scores_gemma":[0.9984319,0.00009632183,0.000402302,0.0003494346,0.0004720514,0.00024797395],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038415988,0.0003774994,0.0007297336,0.0008042384,0.0002787012,0.000037404632,0.0005181456,0.00056623085,0.0026753296],"category_scores_gemma":[0.00017125349,0.00025213978,0.00013791316,0.00048373055,0.00022819679,0.0002299537,0.000055166063,0.00058216375,0.00021577612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023902783,0.00024422785,0.038314026,0.000027496677,0.00058662216,0.00036118834,0.012277135,0.00014789218,0.9358374,0.000036369947,0.008481506,0.0012958844],"study_design_scores_gemma":[0.012044981,0.0062275417,0.2322529,0.0013477458,0.00031544952,0.023534909,0.0139467465,0.000023095516,0.3891277,0.00027591418,0.318698,0.0022050338],"about_ca_topic_score_codex":0.017894486,"about_ca_topic_score_gemma":0.29074112,"teacher_disagreement_score":0.54670966,"about_ca_system_score_codex":0.0002359752,"about_ca_system_score_gemma":0.0012461063,"threshold_uncertainty_score":0.9999931},"labels":[],"label_agreement":null},{"id":"W2326384023","doi":"10.1136/sextrans-2013-051184.0033","title":"S05.4 Integrating Antimicrobial Susceptibility Monitoring in<i>Neisseria Gonorrhoeae</i>to Broader AMR Agenda","year":2013,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Neisseria gonorrhoeae; Medicine; Cefixime; Antibiotic resistance; Penicillin; Spectinomycin; Latin Americans; Action plan; Gonorrhea; Ceftriaxone; Environmental health; Antibiotics; Microbiology; Virology; Biology; Political science","score_opus":0.015861727353973756,"score_gpt":0.2652062692014822,"score_spread":0.24934454184750846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2326384023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99212897,0.0000869259,0.0014272557,0.0005342479,0.003564537,0.0008195718,0.00003144112,0.0003461719,0.0010608645],"genre_scores_gemma":[0.9982032,0.000030383339,0.00034356446,0.0001576689,0.00019573068,0.0002116873,0.000079234655,0.000043428918,0.000735065],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99786854,0.00025039853,0.00064320856,0.00057044637,0.000013701748,0.0006537157],"domain_scores_gemma":[0.99907833,0.00014829992,0.0000850977,0.00041503605,0.00020513007,0.00006807747],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022781159,0.0003594568,0.00040345715,0.00043823983,0.00047080923,0.00012591173,0.00020852436,0.0003683055,0.002313536],"category_scores_gemma":[0.000107239706,0.00034455015,0.00014116388,0.0009457491,0.00009181121,0.0004830682,0.00005371101,0.0006900747,0.0013888807],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025995922,0.00042472497,0.10750811,0.000022965565,0.00009552048,3.0169932e-7,0.00092163135,0.00006898567,0.88181114,0.000067219364,0.0013664066,0.007686991],"study_design_scores_gemma":[0.0026993968,0.0007787099,0.83406085,0.00017495175,0.0000957565,0.00017505257,0.0013569883,0.000020524552,0.11455028,0.00017944751,0.044846248,0.0010617786],"about_ca_topic_score_codex":0.0072408505,"about_ca_topic_score_gemma":0.0036443,"teacher_disagreement_score":0.76726085,"about_ca_system_score_codex":0.000115026545,"about_ca_system_score_gemma":0.00009930931,"threshold_uncertainty_score":0.99990064},"labels":[],"label_agreement":null},{"id":"W2326446096","doi":"10.15766/mep_2374-8265.9965","title":"Neuroinfectious Disease OSCE Station","year":2014,"lang":"en","type":"article","venue":"MedEdPORTAL","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Presentation (obstetrics); Neurology; Encephalitis; Anesthesiology; Competence (human resources); Summative assessment; Pediatrics; Family medicine; Psychiatry; Surgery; Psychology; Formative assessment","score_opus":0.007951728362054733,"score_gpt":0.2273603999069389,"score_spread":0.21940867154488417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2326446096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937901,0.00006435271,0.00074501825,0.0001613757,0.0020275118,0.00008156927,0.000013294977,0.00013530103,0.0029814804],"genre_scores_gemma":[0.99620056,0.0000057436964,0.00001257457,0.000090355126,0.00010826537,0.000013157144,0.00015122099,0.0000099074605,0.0034082343],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994933,0.00007053187,0.00012944211,0.00014976451,0.0000086785085,0.00014828435],"domain_scores_gemma":[0.99970484,0.00003401322,0.000050134742,0.00015213694,0.00003163812,0.000027211141],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000083160616,0.00008336485,0.00009462714,0.000048497066,0.00013151135,0.000015044123,0.000044858272,0.000050857427,0.0017296402],"category_scores_gemma":[0.00009272924,0.000072768686,0.000047033893,0.000064451815,0.000032349446,0.00007264162,0.000017187716,0.00008354971,0.001069351],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021899669,0.0005333904,0.17176713,0.000035844667,0.00011811118,0.000006659509,0.00017124579,0.000037933456,0.7199026,0.01089578,0.04826338,0.04804894],"study_design_scores_gemma":[0.00090028957,0.00017526513,0.49300072,0.000007533683,0.00005238046,0.00005433431,0.000014874912,0.000027841044,0.010690159,0.00057301996,0.49430168,0.00020189841],"about_ca_topic_score_codex":0.000117369935,"about_ca_topic_score_gemma":0.0000676416,"teacher_disagreement_score":0.7092124,"about_ca_system_score_codex":0.0000068426875,"about_ca_system_score_gemma":0.00001693907,"threshold_uncertainty_score":0.9997084},"labels":[],"label_agreement":null},{"id":"W2327689753","doi":"10.1097/rmr.0000000000000021","title":"Noncongenital Central Nervous System Infections in Children","year":2014,"lang":"en","type":"review","venue":"Topics in Magnetic Resonance Imaging","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Meningitis; Medicine; Etiology; Mastoiditis; Central nervous system; Intensive care medicine; Otitis; Pediatrics; INFECTIOUS PROCESS; Bacterial meningitis; Subdural empyema; Immunology; Pathology; Surgery; Internal medicine","score_opus":0.01041739003963371,"score_gpt":0.2653547861315039,"score_spread":0.25493739609187016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327689753","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0071652094,0.9890711,0.000012761579,0.00002532311,0.0018520728,0.000657119,0.000031800646,0.000076948076,0.0011077189],"genre_scores_gemma":[0.0071115885,0.9907462,0.000040316954,0.000013356937,0.00039860737,0.00021040076,0.00011239388,0.00004938644,0.0013177331],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99773854,0.00047222906,0.0007584066,0.00044979044,0.000019388386,0.00056163373],"domain_scores_gemma":[0.99926126,0.000119185155,0.00016857452,0.00040098993,0.000027869017,0.000022120012],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002881222,0.00036265195,0.0011094544,0.0003773452,0.000095380106,0.000052179483,0.00027338986,0.00032595207,0.00019079994],"category_scores_gemma":[0.00006912397,0.0003328903,0.00021003389,0.0003671007,0.000083953215,0.00007678961,0.00012030512,0.0007238158,0.00019120799],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000050131466,0.00005518877,0.022801036,0.00061482977,0.000010749283,0.000004732055,0.000030135001,9.321779e-7,0.0000055805604,0.00032524852,0.00013262751,0.9760139],"study_design_scores_gemma":[0.00054612785,0.000048900205,0.044074696,0.0031773138,0.00008293896,0.0006833193,0.000011614328,0.000007648364,0.0000010993157,0.00001307213,0.9510294,0.00032383495],"about_ca_topic_score_codex":0.00078866776,"about_ca_topic_score_gemma":0.00018824449,"teacher_disagreement_score":0.97569007,"about_ca_system_score_codex":0.00025750336,"about_ca_system_score_gemma":0.000121540994,"threshold_uncertainty_score":0.9999123},"labels":[],"label_agreement":null},{"id":"W2327975788","doi":"","title":"Protéger les nourrissons contre la coqueluche","year":2014,"lang":"fr","type":"article","venue":"Europe PMC (PubMed Central)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gynecology; Medicine; Humanities; Art","score_opus":0.013661300903038904,"score_gpt":0.22114629580459327,"score_spread":0.20748499490155436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327975788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88915896,0.01770925,0.00086968957,0.01670782,0.019145623,0.0016650917,0.00026666437,0.00038290504,0.05409397],"genre_scores_gemma":[0.85953176,0.0028661096,0.0001262363,0.00032631948,0.0015430131,0.00015737476,0.00010108644,0.00009762611,0.13525045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955897,0.0017747255,0.0004880627,0.00054555223,0.00003233244,0.0015696721],"domain_scores_gemma":[0.9985828,0.0003089247,0.00021666949,0.00050685427,0.0001812905,0.00020347284],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00071711966,0.00042961052,0.00050458434,0.00009795924,0.00040291622,0.0001341791,0.0003251665,0.00058061926,0.003921244],"category_scores_gemma":[0.0006162194,0.00039005958,0.00019596581,0.00028961973,0.00041357556,0.00019386274,0.00014900792,0.00080170174,0.0018823236],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061416184,0.0022404552,0.08919084,0.00042353474,0.0014587501,0.00005278234,0.004966402,0.000026855058,0.1746939,0.0841964,0.24701269,0.39512324],"study_design_scores_gemma":[0.0016629492,0.0001390075,0.09806073,0.000110680376,0.0001672082,0.00022037655,0.00005756352,0.000007219706,0.011808124,0.00009143071,0.8872874,0.00038733345],"about_ca_topic_score_codex":0.00050281856,"about_ca_topic_score_gemma":0.00012689445,"teacher_disagreement_score":0.6402747,"about_ca_system_score_codex":0.0000782397,"about_ca_system_score_gemma":0.00010900347,"threshold_uncertainty_score":0.9998551},"labels":[],"label_agreement":null},{"id":"W2328353822","doi":"10.1021/acs.analchem.5b00276","title":"Determination of Meningococcal Serogroups in Formulated Monovalent and Multivalent Polysaccharide and Polysaccharide-Conjugate Vaccines","year":2015,"lang":"en","type":"letter","venue":"Analytical Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Canada","funders":"Health Canada","keywords":"Chemistry; Polysaccharide; Conjugate; Conjugate vaccine; Meningococcal vaccine; Neisseria meningitidis; Microbiology; Chromatography; Biochemistry; Bacteria; Antibiotics","score_opus":0.020742083468082536,"score_gpt":0.2642678329401976,"score_spread":0.24352574947211508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2328353822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858591,0.00095859583,0.000014896057,0.012547474,0.00016224175,0.00020005344,0.00006692828,0.00003912705,0.00015156384],"genre_scores_gemma":[0.99355036,0.00025215116,0.0000639132,0.0027462,0.0003646987,0.000034902252,0.00031895775,0.000049096427,0.0026197047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984304,0.000058668462,0.0006164666,0.00048298264,0.00004022629,0.00037127387],"domain_scores_gemma":[0.9991675,0.0001484961,0.00023408855,0.00026067437,0.00014438889,0.000044856526],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020940563,0.00035399987,0.0006768762,0.00014130752,0.000050467363,0.000028015662,0.00013405507,0.0011640674,0.00024738684],"category_scores_gemma":[0.00013239661,0.00031459506,0.00009175027,0.00014716656,0.00012513447,0.000103896535,0.00017049284,0.0009195121,0.000007773459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027191028,0.00018208571,0.01783011,0.0008250452,0.0003812405,0.000047830796,0.0001804187,9.4583805e-7,0.9486408,0.000018661693,0.027491344,0.0041296026],"study_design_scores_gemma":[0.01619731,0.00084475934,0.033131797,0.0016157498,0.0022897448,0.0017930735,0.00033506824,0.003736861,0.7831363,0.0017852908,0.15146154,0.0036724997],"about_ca_topic_score_codex":0.00042031534,"about_ca_topic_score_gemma":0.000015733598,"teacher_disagreement_score":0.1655045,"about_ca_system_score_codex":0.00006290692,"about_ca_system_score_gemma":0.000052554195,"threshold_uncertainty_score":0.9999306},"labels":[],"label_agreement":null},{"id":"W2330744417","doi":"10.4172/2157-7560.1000216","title":"Potency/Immunogenicity Profile of DPT Vaccines Used in the Expanded Programme on Immunization in South-East, Nigeria","year":2014,"lang":"en","type":"article","venue":"Journal of Vaccines & Vaccination","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Foreign Affairs and Trade, Australian Government; International Development Research Centre; Foreign Affairs and International Trade Canada; African Population and Health Research Center; Canadian Bureau for International Education","keywords":"Immunogenicity; Potency; Immunization; Medicine; Vaccination; Virology; Diphtheria; Immunology; Biology; Antigen","score_opus":0.017367850942434496,"score_gpt":0.25613738778869255,"score_spread":0.23876953684625807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2330744417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99683577,0.00050369534,0.00025831096,0.00076732645,0.0009326308,0.0005039663,0.000005887723,0.000019023604,0.00017336474],"genre_scores_gemma":[0.9994209,0.00008360995,0.00009660257,0.000041109175,0.00016644373,0.000027097714,0.000048845857,0.000021882692,0.00009354434],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973551,0.00078721705,0.0012483256,0.00020327224,0.000079820675,0.0003262701],"domain_scores_gemma":[0.9978177,0.00031963177,0.0010746574,0.00034677942,0.00042127652,0.000019935003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016110062,0.0002525315,0.0005683319,0.000708049,0.000119332755,0.000043438962,0.00042929148,0.00026424552,0.00030913073],"category_scores_gemma":[0.00065649155,0.00017226524,0.00017888738,0.0008049488,0.000011012239,0.00038483433,0.00004646729,0.00045034155,0.000018857869],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028226227,0.0025842409,0.42373046,0.00014976304,0.00023338797,0.0000041670946,0.009715411,0.00053877966,0.5052216,0.0016591665,0.00076524675,0.05257515],"study_design_scores_gemma":[0.007854717,0.0015048721,0.94686204,0.00020941271,0.00006432703,0.00014453106,0.0018854272,0.00009513674,0.03879425,0.00071949326,0.0016015001,0.00026430588],"about_ca_topic_score_codex":0.00013722225,"about_ca_topic_score_gemma":0.00043200445,"teacher_disagreement_score":0.52313155,"about_ca_system_score_codex":0.00009445458,"about_ca_system_score_gemma":0.00010076602,"threshold_uncertainty_score":0.7024773},"labels":[],"label_agreement":null},{"id":"W2332335643","doi":"","title":"High-resolution Melting Analysis PCR Assay for Detection and Differentiation of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica","year":2006,"lang":"en","type":"article","venue":"44th Annual Meeting","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Bordetella pertussis; Bordetella bronchiseptica; Bordetella; Microbiology; High Resolution Melt; Polymerase chain reaction; Virology; Biology; Bacteria; Gene; Genetics","score_opus":0.006237119137074964,"score_gpt":0.2228497332643018,"score_spread":0.21661261412722682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2332335643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99155915,0.0022595897,0.004945007,0.000111510664,0.00040423218,0.00031963305,0.00011730493,0.00007654214,0.00020701488],"genre_scores_gemma":[0.9982735,0.0002001731,0.0008587396,0.000014847695,0.00016676543,0.00003761925,0.0001758211,0.000024861387,0.00024768675],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982492,0.00024989533,0.0006039345,0.00045702897,0.000039292452,0.00040069167],"domain_scores_gemma":[0.9986611,0.0005221973,0.00038059967,0.00018411315,0.0002147732,0.00003719217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005321741,0.00026250072,0.0005227342,0.0003545139,0.00055206893,0.00005349557,0.00007168202,0.0003099229,0.00006477739],"category_scores_gemma":[0.00030870322,0.00023568634,0.00016327486,0.00038002952,0.00011370664,0.00015895274,0.00006785153,0.00014879141,0.0000027764054],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031703708,0.00012632976,0.02502415,0.00010298471,0.0005936449,1.9122865e-7,0.00030624488,0.00019516464,0.9249764,0.00027499418,0.0001376932,0.047945157],"study_design_scores_gemma":[0.00487684,0.0012208755,0.48834392,0.00018048668,0.003904231,0.000043141325,0.0013278511,0.008088962,0.4734145,0.0005561037,0.016849294,0.0011937638],"about_ca_topic_score_codex":0.002292555,"about_ca_topic_score_gemma":0.0011124716,"teacher_disagreement_score":0.46331978,"about_ca_system_score_codex":0.000033213877,"about_ca_system_score_gemma":0.000018253153,"threshold_uncertainty_score":0.961101},"labels":[],"label_agreement":null},{"id":"W2332440105","doi":"10.1136/sextrans-2011-050108.40","title":"P1-S1.40 Emerging molecular mutations of reduced susceptibility to third-generation Cephalosporins in<i>Neisseria gonorrhoeae</i>isolates from Saskatchewan, Canada","year":2011,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Saskatchewan Disease Control Laboratory","funders":"","keywords":"Neisseria gonorrhoeae; Cephalosporin; Medicine; Microbiology; Neisseriaceae; Virology; Third generation; Gonococcal infection; Gonorrhea; Antibiotics; Genetics; Sexually transmitted disease; Biology; Syphilis","score_opus":0.014866856578386614,"score_gpt":0.2330407081746248,"score_spread":0.2181738515962382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2332440105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940681,0.00013344726,0.0022647064,0.00016465745,0.001925569,0.0004923574,0.00026853394,0.000115221155,0.0005674087],"genre_scores_gemma":[0.99845785,0.000013167169,0.0003877179,0.00008803151,0.000058523092,0.00009868603,0.00070242834,0.000031765685,0.00016184607],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981941,0.0002188874,0.0007095207,0.00047827238,0.00001772804,0.00038149251],"domain_scores_gemma":[0.99905443,0.00008833093,0.00014048303,0.00043143448,0.00021804994,0.000067281995],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014547477,0.00028360813,0.00038961243,0.00027956266,0.00026246725,0.000016844235,0.00016545101,0.0002451927,0.0016040149],"category_scores_gemma":[0.000058302485,0.0002993836,0.000102738624,0.0008058696,0.00007000653,0.0002096726,0.000028025339,0.0003256353,0.000046615176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007351009,0.0004656676,0.023205606,0.000012670358,0.00019883184,6.3107893e-7,0.0038178018,0.0002687069,0.970218,0.00014158092,0.00030967596,0.0012873078],"study_design_scores_gemma":[0.0016868213,0.00061036245,0.293648,0.00005435231,0.00022247594,0.00002300564,0.004042662,0.00005179674,0.6931361,0.00046969423,0.005370608,0.00068414374],"about_ca_topic_score_codex":0.6996968,"about_ca_topic_score_gemma":0.94125825,"teacher_disagreement_score":0.27708194,"about_ca_system_score_codex":0.00012913003,"about_ca_system_score_gemma":0.00056125957,"threshold_uncertainty_score":0.9999458},"labels":[],"label_agreement":null},{"id":"W2332968157","doi":"10.1017/s031716710000442x","title":"The Numbers Needed to Treat for Neurological Disorders","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Calgary; Western University","funders":"","keywords":"Medicine; Intensive care medicine","score_opus":0.023153915008186726,"score_gpt":0.2655313018761223,"score_spread":0.24237738686793556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2332968157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9530064,0.0010238228,0.0000548414,0.042120267,0.0022379933,0.00028129917,0.000016720545,0.000023598275,0.0012351009],"genre_scores_gemma":[0.99413025,0.00028433985,0.00066684996,0.0043269964,0.00040916898,0.000012350296,5.2912657e-7,0.0000116459205,0.00015783994],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99625003,0.00081021857,0.0008179532,0.00047092786,0.00012213454,0.0015287264],"domain_scores_gemma":[0.99708724,0.0011852755,0.0004767959,0.00016216114,0.00033543378,0.0007530699],"candidate_categories":["sts"],"consensus_categories":["sts"],"category_scores_codex":[0.0031453406,0.00032173755,0.00042613782,0.0005104638,0.0070403498,0.0006725386,0.0019889127,0.0002539823,0.00022766119],"category_scores_gemma":[0.0025204946,0.00017693367,0.00032350235,0.00088121847,0.004280618,0.0005868228,0.00007204985,0.00089007436,0.000021689306],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023231157,0.00029830195,0.62213403,0.000015707788,0.00014220247,0.00040535093,0.0021563626,0.013771959,0.005964454,0.012945009,0.10030486,0.23953865],"study_design_scores_gemma":[0.0016351858,0.1516304,0.06399585,0.000026902479,0.00012374524,0.022877809,0.0009839571,0.0003463687,0.001037876,0.020926952,0.73556226,0.0008526757],"about_ca_topic_score_codex":0.0016186803,"about_ca_topic_score_gemma":0.14784166,"teacher_disagreement_score":0.6352574,"about_ca_system_score_codex":0.000109162866,"about_ca_system_score_gemma":0.0011281,"threshold_uncertainty_score":0.9984292},"labels":[],"label_agreement":null},{"id":"W2335850096","doi":"10.1038/srep24931","title":"Glycoengineered Outer Membrane Vesicles: A Novel Platform for Bacterial Vaccines","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":134,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Saint Hyacinthe; Université de Montréal; University of Alberta","funders":"","keywords":"Glycan; Microbiology; Campylobacter jejuni; Antibiotics; Human pathogen; Biology; Pathogen; Streptococcus pneumoniae; Bacterial outer membrane; Escherichia coli; Bacteria; Gene; Genetics","score_opus":0.019389056046131174,"score_gpt":0.23927785759181466,"score_spread":0.2198888015456835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2335850096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.955538,0.000063532105,0.0022113563,0.00037825442,0.04103128,0.00042026507,0.00005698962,0.00014323101,0.00015710175],"genre_scores_gemma":[0.9842022,0.00000397355,0.0002887425,0.000012945279,0.00040929293,0.000088138135,0.00017794172,0.00002271718,0.014794027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854964,0.000012119731,0.00047605255,0.0005492269,0.000024574725,0.00038837717],"domain_scores_gemma":[0.9989389,0.00008974061,0.00019031591,0.0005631161,0.00018263988,0.00003527212],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005015878,0.00017608161,0.0002511934,0.00015403419,0.00031963966,0.00010921833,0.00011611066,0.00017035763,0.0013979254],"category_scores_gemma":[0.00019070084,0.0001091533,0.00014685998,0.0001523461,0.000093259856,0.0003014212,0.000057268426,0.000048590613,0.00014089241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010965205,0.0000639427,0.00019258585,0.000012887638,0.00006266132,0.000003073085,0.000056979326,5.2886503e-7,0.9769242,0.00021938096,0.018303826,0.0040503186],"study_design_scores_gemma":[0.000983867,0.000055365777,0.00048669573,0.000022020713,0.000023705057,0.0003821504,0.00001104641,9.137339e-7,0.5148868,0.00044889635,0.482557,0.0001415359],"about_ca_topic_score_codex":0.000020933894,"about_ca_topic_score_gemma":0.000028500637,"teacher_disagreement_score":0.4642532,"about_ca_system_score_codex":0.00003066148,"about_ca_system_score_gemma":0.00007389921,"threshold_uncertainty_score":0.99951494},"labels":[],"label_agreement":null},{"id":"W2336263819","doi":"10.1093/ije/dyv096.396","title":"Epidemiology of Meningitis Caused by Haemophilus influenzae, Neisseria meningitidis, and Streptococcus pneumoniae in the North American Arctic, 2000ã 10.","year":2015,"lang":"en","type":"article","venue":"International Journal of Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Neisseria meningitidis; Haemophilus influenzae; Streptococcus pneumoniae; Meningitis; Microbiology; Epidemiology; Medicine; Neisseriaceae; Bacterial meningitis; Virology; Biology; Bacteria; Pediatrics; Antibiotics; Pathology","score_opus":0.049013070292324296,"score_gpt":0.3361091845586137,"score_spread":0.28709611426628945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2336263819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99003375,0.0036916635,0.00014182579,0.0047152108,0.0011118078,0.0001307692,0.00007059502,0.000008224588,0.00009615484],"genre_scores_gemma":[0.99835664,0.00047466045,0.00017505533,0.00064452214,0.00017712757,0.000013871438,0.00007203245,0.000012085206,0.0000740244],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9957393,0.002066795,0.0015588999,0.00023608982,0.000034465997,0.00036448028],"domain_scores_gemma":[0.99387735,0.0037463438,0.0015861205,0.00019524156,0.00052649266,0.000068420646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003212746,0.00020752267,0.00094455126,0.0002866138,0.000047724287,0.000004633704,0.000509714,0.00015913628,0.00014587531],"category_scores_gemma":[0.006778071,0.0001443245,0.00013956796,0.00017822934,0.00045155428,0.0001624149,0.00010271752,0.00048140218,0.000017042537],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032883935,0.00012595876,0.9789871,0.0000046487608,0.00039334837,0.000010268871,0.00032351285,0.00013490961,0.0065166033,0.0009915981,0.009063198,0.0031200042],"study_design_scores_gemma":[0.0020181106,0.0011913315,0.9476163,0.00004812201,0.00006094205,0.0009316223,0.00033911358,0.000018889217,0.00043432915,0.0021346891,0.045031223,0.0001753585],"about_ca_topic_score_codex":0.0016365085,"about_ca_topic_score_gemma":0.00059235294,"teacher_disagreement_score":0.035968028,"about_ca_system_score_codex":0.000086271626,"about_ca_system_score_gemma":0.00010268797,"threshold_uncertainty_score":0.8114474},"labels":[],"label_agreement":null},{"id":"W2338604303","doi":"10.1093/ofid/ofv133.1428","title":"Validation of Physician Diagnosis of Bordetella pertussis in Alberta, Canada (2004–2014)","year":2015,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Bordetella pertussis; Pathogenic organism; Pediatrics; Family medicine; Microbiology","score_opus":0.010326707504875115,"score_gpt":0.24621309761251028,"score_spread":0.23588639010763518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2338604303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99304426,0.00047825812,0.000003287236,0.000298748,0.0007062159,0.00031410513,0.00012277631,0.000010425245,0.005021914],"genre_scores_gemma":[0.9992275,0.00005186838,0.0000023092173,0.000093847724,0.000015481872,0.00008546337,0.00015116516,0.000012751768,0.00035956668],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991538,0.00012330867,0.00031215663,0.00017955939,0.000023997283,0.00020716533],"domain_scores_gemma":[0.9992452,0.00014271049,0.0001951546,0.00023087909,0.00014729757,0.000038758273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073293595,0.00013131594,0.00032832994,0.0000920987,0.00006629475,0.00001816642,0.0001827437,0.000078866775,0.00035385595],"category_scores_gemma":[0.00017504077,0.0001185836,0.000062103805,0.00020125697,0.00005306556,0.00021760009,0.000120751894,0.00005908028,0.000022270564],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010191158,0.0005766567,0.9575226,0.000019930463,0.00009051992,4.4806612e-7,0.000096764496,0.00011598154,0.0030185648,0.00049995026,0.033874776,0.0040819407],"study_design_scores_gemma":[0.0072977915,0.0013243962,0.51747864,0.00024386619,0.00034156148,0.000020437576,0.0013238996,0.000010622244,0.3037957,0.0022471596,0.16508749,0.0008284231],"about_ca_topic_score_codex":0.84664136,"about_ca_topic_score_gemma":0.68105084,"teacher_disagreement_score":0.4400439,"about_ca_system_score_codex":0.00009489376,"about_ca_system_score_gemma":0.00046032926,"threshold_uncertainty_score":0.4835699},"labels":[],"label_agreement":null},{"id":"W2338941173","doi":"10.1093/cid/ciw233","title":"Optimal Timing of Immunization Against Pertussis During Pregnancy","year":2016,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Immunization; Pregnancy; Pertussis vaccine; Whooping cough; Bordetella pertussis; Pediatrics; Immunology; Obstetrics; Vaccination; Antibody","score_opus":0.02971730306262577,"score_gpt":0.3053035331404958,"score_spread":0.27558623007787003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2338941173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9443923,0.0075756526,0.00018441024,0.031939026,0.011057964,0.00089866924,0.0011064714,0.00070400356,0.0021414557],"genre_scores_gemma":[0.9499989,0.007413845,0.000014884087,0.023113111,0.0068108644,0.00021319631,0.0028980498,0.00023512107,0.009302028],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99731094,0.0005341886,0.001108072,0.00055537943,0.000033138596,0.00045825582],"domain_scores_gemma":[0.99758554,0.00076180603,0.0007034355,0.0006518649,0.00025806433,0.000039321876],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000905424,0.00039871963,0.00090401864,0.00022778113,0.0002881988,0.000032455515,0.00026974166,0.0014604714,0.0017198861],"category_scores_gemma":[0.0006540769,0.00030743505,0.0006646464,0.00016240063,0.00035821798,0.0001603373,0.00020871514,0.00095716154,0.00034557263],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017753658,0.0012319201,0.1533299,0.0012203145,0.0031157995,0.000074834265,0.00008450144,0.000020615234,0.026253194,0.00003600338,0.7736958,0.040759537],"study_design_scores_gemma":[0.0064921463,0.0010229985,0.114489056,0.004640701,0.0016288769,0.00008586414,0.000025728901,0.0000058721444,0.0045069214,0.00014025217,0.8652708,0.0016907962],"about_ca_topic_score_codex":0.000022428587,"about_ca_topic_score_gemma":0.0000025784727,"teacher_disagreement_score":0.09157494,"about_ca_system_score_codex":0.00005995269,"about_ca_system_score_gemma":0.0001295637,"threshold_uncertainty_score":0.9999378},"labels":[],"label_agreement":null},{"id":"W2341293054","doi":"10.1016/j.tvjl.2016.04.004","title":"Comparative efficacy of intranasal and oral vaccines against Bordetella bronchiseptica in dogs","year":2016,"lang":"en","type":"article","venue":"The Veterinary Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Zoetis","keywords":"Retching; Nasal administration; Medicine; Bordetella bronchiseptica; Placebo; Immunology; Anesthesia; Vomiting; Biology; Pathology","score_opus":0.03253075979814383,"score_gpt":0.29724596861012775,"score_spread":0.2647152088119839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341293054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977706,0.0007409804,0.000042799245,0.0006072876,0.00048879004,0.00008179049,0.0000065458366,0.000008847872,0.00025235704],"genre_scores_gemma":[0.9991523,0.0005818812,0.000040679322,0.00001935152,0.00006323509,0.000001915403,0.0000012495152,0.0000059118042,0.0001334606],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99920887,0.00024971322,0.0002668561,0.00009276323,0.000010724455,0.00017105533],"domain_scores_gemma":[0.99951625,0.00021037343,0.00010714769,0.000110746536,0.00003781081,0.000017660055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022734415,0.000105239815,0.00024038235,0.000088029046,0.00013022302,0.000012749722,0.00012368693,0.00006549309,0.00031813546],"category_scores_gemma":[0.00002172905,0.000051797957,0.000047440466,0.000074256124,0.00013642629,0.000096755604,0.00006265904,0.00016920637,0.000020075255],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078974734,0.000092172864,0.0029324542,0.000003906062,0.000066875386,0.0000043853934,0.00042863772,0.000001893922,0.97139955,0.000043612978,0.0007778407,0.023458928],"study_design_scores_gemma":[0.013611076,0.0050319005,0.83751214,0.00040486315,0.00009573348,0.005086794,0.00047893758,0.000009357935,0.057219338,0.00041225375,0.07966504,0.00047256768],"about_ca_topic_score_codex":0.000022878541,"about_ca_topic_score_gemma":0.000017039385,"teacher_disagreement_score":0.9141802,"about_ca_system_score_codex":0.000014502399,"about_ca_system_score_gemma":0.000021813392,"threshold_uncertainty_score":0.348336},"labels":[],"label_agreement":null},{"id":"W2341479591","doi":"10.1097/inf.0000000000000795","title":"Pertussis Across the Globe","year":2015,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":237,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Sanofi Pasteur","keywords":"Medicine; Epidemiology; Incidence (geometry); Pertussis vaccine; Disease; Bordetella pertussis; Whooping cough; Public health; Disease burden; Pediatrics; Environmental health; Immunization; Immunology; Vaccination; Pathology","score_opus":0.0310104487578346,"score_gpt":0.3249671136416371,"score_spread":0.2939566648838025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341479591","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029095788,0.9873254,0.000012960231,0.00019528304,0.008218291,0.00055626256,0.00023256021,0.00010103305,0.0004486838],"genre_scores_gemma":[0.0009355683,0.99094886,7.20084e-7,0.0000739145,0.006211429,0.00009675892,0.000047807054,0.000060204475,0.0016247141],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99692005,0.0012891799,0.00076822675,0.00028610427,0.00006542107,0.00067103066],"domain_scores_gemma":[0.99760365,0.00048644998,0.00082448235,0.0006638546,0.0002760488,0.00014550847],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013733574,0.000534834,0.0010147204,0.00014434899,0.0022052564,0.0003134734,0.00075765065,0.00040598825,0.0008845178],"category_scores_gemma":[0.00039766857,0.00022967043,0.0011188729,0.0006161389,0.00016724716,0.00012713503,0.00029278966,0.0018068999,0.001885228],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007217054,0.00038844338,0.0020232212,0.0012292112,0.001373915,0.000021512918,0.00034310215,0.00000637047,9.359472e-7,0.00011680786,0.1882689,0.80615544],"study_design_scores_gemma":[0.00042560752,0.00007210336,0.00022946813,0.00016121124,0.004185478,0.0045796647,0.000040532886,1.9504115e-7,4.5216016e-8,0.00027356762,0.9897248,0.0003073034],"about_ca_topic_score_codex":0.00006304813,"about_ca_topic_score_gemma":0.000013893687,"teacher_disagreement_score":0.8058481,"about_ca_system_score_codex":0.00022763292,"about_ca_system_score_gemma":0.0010646154,"threshold_uncertainty_score":0.9990937},"labels":[],"label_agreement":null},{"id":"W2343202857","doi":"","title":"External Quality Assurance and Comparability of Antimicrobial Susceptibility Testing of Neisseria Gonorrhoeae in Canada","year":2014,"lang":"en","type":"article","venue":"2014 National STD Prevention Conference","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria gonorrhoeae; Comparability; Quality assurance; Microbiology; Medicine; Biology; Mathematics","score_opus":0.04092242035218107,"score_gpt":0.2959668453198315,"score_spread":0.2550444249676504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343202857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978504,0.00004727309,0.0013108004,0.000054323988,0.00024590822,0.00012878288,0.000059131482,0.000007983803,0.00029538927],"genre_scores_gemma":[0.9995181,0.000006561959,0.0003871089,0.000007795143,0.000013235976,0.0000049001887,0.000021995045,0.000003078679,0.00003721825],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99879146,0.00038146393,0.0005072651,0.00019219206,0.000020364458,0.00010728232],"domain_scores_gemma":[0.99871236,0.00043575154,0.0003064709,0.00011078283,0.0004219622,0.000012672172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008165044,0.00008603519,0.00026246923,0.000041729756,0.0000453074,0.0000060643915,0.000090962996,0.0000623581,0.000347946],"category_scores_gemma":[0.00051660044,0.00008559634,0.00002998502,0.0000879802,0.00008534682,0.000091778245,0.000038752038,0.00009932638,0.0000034894385],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059055317,0.00008139106,0.49525386,0.000062136365,0.000010885228,6.840181e-9,0.000015057017,0.000034498247,0.49902558,0.0023049621,0.00006927346,0.003083277],"study_design_scores_gemma":[0.00066355534,0.00004477351,0.97632486,0.000066416906,0.0000052830483,0.0000045063994,0.00001186505,0.00010464547,0.020995416,0.0014728473,0.00022648842,0.000079343525],"about_ca_topic_score_codex":0.38960838,"about_ca_topic_score_gemma":0.6158998,"teacher_disagreement_score":0.481071,"about_ca_system_score_codex":0.00006509044,"about_ca_system_score_gemma":0.00056946167,"threshold_uncertainty_score":0.6144563},"labels":[],"label_agreement":null},{"id":"W2363451937","doi":"","title":"Multi-Antigen Sequence Types (NG-MAST) and Antimicrobial Susceptibilities on Neisseria Gonorrhoeae Isolated in Canada, 2010-2012","year":2014,"lang":"en","type":"article","venue":"2014 National STD Prevention Conference","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria gonorrhoeae; Microbiology; Antimicrobial; Antigen; Neisseria; Biology; Virology; Immunology; Bacteria; Genetics","score_opus":0.03169287556515263,"score_gpt":0.26545724308388496,"score_spread":0.23376436751873234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2363451937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969143,0.00012489234,0.0007898477,0.00037415582,0.0010866252,0.00021254156,0.000080749065,0.000037857837,0.0003789905],"genre_scores_gemma":[0.99660695,0.0000867672,0.000119340875,0.0000870958,0.000047629932,0.000015882224,0.00015544,0.0000110133815,0.0028698575],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895555,0.00022440618,0.00029139596,0.00029258733,0.000019737801,0.00021633304],"domain_scores_gemma":[0.9993911,0.00012182861,0.00012387334,0.00012158731,0.00021645127,0.000025156349],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027880017,0.00015739283,0.0002005616,0.00010882421,0.0001416302,0.000034744015,0.000115515395,0.00013327437,0.0018597475],"category_scores_gemma":[0.00010304874,0.0001506702,0.000032978194,0.00008294427,0.00006267305,0.00020000536,0.00004394258,0.00017896885,0.00020093814],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029610348,0.00027601334,0.062789425,0.000048960068,0.00012307803,3.8533796e-7,0.00017088986,0.00015649847,0.90003556,0.010260465,0.013301436,0.012541204],"study_design_scores_gemma":[0.0023782344,0.0003156246,0.9518795,0.00015627689,0.000022299515,0.000043124608,0.00006899199,0.001447195,0.010082924,0.001041411,0.032051805,0.0005126308],"about_ca_topic_score_codex":0.18911144,"about_ca_topic_score_gemma":0.5837918,"teacher_disagreement_score":0.8899526,"about_ca_system_score_codex":0.00012346626,"about_ca_system_score_gemma":0.00050858717,"threshold_uncertainty_score":0.9990527},"labels":[],"label_agreement":null},{"id":"W2371735899","doi":"10.1080/21645515.2015.1130193","title":"Knowledge, attitudes, beliefs, and behaviors of pregnant women approached to participate in a Tdap maternal immunization randomized, controlled trial","year":2016,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; St. Francis Xavier University; Dalhousie University","funders":"","keywords":"Medicine; Pregnancy; Diphtheria; Tetanus; Pertussis vaccine; Immunization; Vaccination; Randomized controlled trial; Whooping cough; Family medicine; Pediatrics; Obstetrics; Immunology; Internal medicine; Antibody","score_opus":0.026319630991415394,"score_gpt":0.30254662434728036,"score_spread":0.276226993355865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2371735899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99248815,0.0040248213,0.00011015179,0.00008935822,0.0006468677,0.002521571,0.000011160006,0.000052178904,0.000055722565],"genre_scores_gemma":[0.99608177,0.00073768053,0.00003020389,0.000023331637,0.000060323942,0.0010528255,0.000013217802,0.000038819326,0.0019618045],"study_design_codex":"bench_or_experimental","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99755263,0.0005946264,0.0011046012,0.00029580464,0.000028389546,0.0004239362],"domain_scores_gemma":[0.9987922,0.0003199444,0.00034414284,0.00036938654,0.00014272647,0.00003160154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093850686,0.00029951145,0.0013508927,0.00031114154,0.00014348922,0.000033067055,0.0002101268,0.00022366838,0.0005196852],"category_scores_gemma":[0.00008367113,0.00018653671,0.00015768084,0.00018061527,0.00011273643,0.00011915731,0.00011112807,0.00012650559,0.00003307629],"study_design_candidate":"randomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.40060422,0.00090163585,0.005983973,0.000030619936,0.0005865551,3.5679662e-7,0.0022294703,0.0000021495566,0.58215684,0.0010124942,0.000013195956,0.0064785],"study_design_scores_gemma":[0.9550828,0.00084021053,0.02152863,0.00027817127,0.00019333135,0.000011099239,0.00007811471,0.000003041625,0.019958148,0.0001964372,0.0015154874,0.00031455155],"about_ca_topic_score_codex":0.00016268503,"about_ca_topic_score_gemma":0.00011023095,"teacher_disagreement_score":0.5621987,"about_ca_system_score_codex":0.00006927852,"about_ca_system_score_gemma":0.000044912176,"threshold_uncertainty_score":0.7606746},"labels":[],"label_agreement":null},{"id":"W2385005060","doi":"","title":"Management of Community-Acquired Acute Bacterial Meningitis in Children","year":2011,"lang":"en","type":"article","venue":"Testowy IndexCopernicus","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bacterial meningitis; Psychomotor learning; Medicine; Pediatric Infectious Disease; Meningitis; Intensive care medicine; Infectious disease (medical specialty); Pediatrics; Disease; Internal medicine; Psychiatry","score_opus":0.02642819474039829,"score_gpt":0.2459716624740375,"score_spread":0.21954346773363922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2385005060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935913,0.00020429795,0.000007409906,0.00001233954,0.0005809532,0.00025590637,0.000053585172,0.000066614964,0.005227602],"genre_scores_gemma":[0.9989011,0.000084303116,0.00012918368,0.000012802806,0.000020013984,0.000035945486,0.00014118892,0.000017614893,0.0006578448],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990158,0.00021279536,0.00035512733,0.000136214,0.000014715159,0.00026535528],"domain_scores_gemma":[0.9994066,0.000025380394,0.00011920288,0.00039494774,0.000037216647,0.000016696058],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021302438,0.00016450256,0.00029269248,0.00013322562,0.00012261853,0.000008113656,0.00030483663,0.00017567354,0.0036756527],"category_scores_gemma":[0.000007495697,0.00014916193,0.00006693123,0.00018181812,0.000111458474,0.0001132523,0.00020702282,0.00020519807,0.00022110723],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006904924,0.0016508711,0.1510622,0.000039937684,0.0018803306,0.00001221611,0.0045320643,0.0000012868259,0.81050926,0.0015798088,0.0013246073,0.026716894],"study_design_scores_gemma":[0.0027588357,0.00040595676,0.8979767,0.00006946769,0.0001323065,0.0001386726,0.0002798917,2.0295253e-7,0.09630677,0.00017398004,0.0015193151,0.00023788858],"about_ca_topic_score_codex":0.0030558053,"about_ca_topic_score_gemma":0.00007518264,"teacher_disagreement_score":0.7469145,"about_ca_system_score_codex":0.00002583293,"about_ca_system_score_gemma":0.000016085989,"threshold_uncertainty_score":0.9972351},"labels":[],"label_agreement":null},{"id":"W2390458998","doi":"10.1177/1040638716646806","title":"Cilia-associated bacteria in fatal <i>Bordetella bronchiseptica</i> pneumonia of dogs and cats","year":2016,"lang":"en","type":"article","venue":"Journal of Veterinary Diagnostic Investigation","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Bordetella bronchiseptica; Pneumonia; Pathology; Medicine; Microbiology; Biology; Bacteria; Internal medicine","score_opus":0.018468441809951462,"score_gpt":0.24668359730764622,"score_spread":0.22821515549769475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2390458998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981846,0.00034293614,0.000014970414,0.00051870215,0.0007793863,0.00009985103,0.000026275527,0.000008073445,0.000025184909],"genre_scores_gemma":[0.9993652,0.0003825166,0.000089945475,0.000034575973,0.00004480734,0.0000039501942,0.000010876285,0.0000102927,0.000057836623],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988777,0.00022318526,0.0005930147,0.000117175725,0.000026179536,0.00016275594],"domain_scores_gemma":[0.99854565,0.0007100009,0.0004646599,0.000100100246,0.00014065146,0.000038931263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033949965,0.00012518707,0.00030629334,0.00017663612,0.000046345485,0.000011038489,0.00008920786,0.00015571997,0.0001269912],"category_scores_gemma":[0.0015467211,0.000089793175,0.00005536766,0.00012003842,0.00017419897,0.00026964178,0.000046623063,0.00012899174,0.000012443933],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010924115,0.00009302223,0.07477465,0.00001822888,0.000045237448,0.000009193229,0.00018145969,9.671744e-7,0.92192847,0.00006545739,0.00023207527,0.0025419903],"study_design_scores_gemma":[0.0024100034,0.0021327941,0.9133735,0.0006414473,0.00005892392,0.00060047593,0.0000264689,0.0000013554513,0.07884841,0.0005838699,0.0011746507,0.00014815138],"about_ca_topic_score_codex":0.0001128638,"about_ca_topic_score_gemma":0.00003143202,"teacher_disagreement_score":0.84308004,"about_ca_system_score_codex":0.000054481727,"about_ca_system_score_gemma":0.000084179155,"threshold_uncertainty_score":0.36616594},"labels":[],"label_agreement":null},{"id":"W2394777273","doi":"10.1136/bmj.320.7229.247","title":"Meningococcal disease in healthcare workers","year":2000,"lang":"en","type":"letter","venue":"BMJ","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Medicine; Health care; Meningococcal disease; Family medicine; Pediatrics; Neisseria meningitidis; Political science","score_opus":0.020112394556095193,"score_gpt":0.2879085375818886,"score_spread":0.2677961430257934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394777273","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03588412,0.0018849451,8.4545496e-7,0.9579479,0.0025809095,0.00050074985,0.00013761705,0.00008771585,0.0009752028],"genre_scores_gemma":[0.110578455,0.0004040461,0.000039113762,0.78903127,0.008995948,0.00075435365,0.006786882,0.0001506686,0.083259255],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99875396,0.00023880051,0.00031473066,0.00030455238,0.00001139499,0.00037658156],"domain_scores_gemma":[0.9995029,0.000056534423,0.000084793355,0.00031683798,0.000019702959,0.00001922614],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008995401,0.00020863966,0.0003079174,0.00016331008,0.00008037558,0.000016956761,0.00013694042,0.00087718957,0.002480356],"category_scores_gemma":[0.00002021915,0.00018776806,0.00011205401,0.00011297519,0.000046479116,0.000035702484,0.000034987934,0.001240824,0.0011519035],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011461371,0.000021428576,0.008919757,0.0000396613,0.00004195247,0.00005400879,0.000018751483,0.0000013416218,0.00017588444,0.000007856175,0.98829466,0.0023101023],"study_design_scores_gemma":[0.00041670696,0.000032219126,0.015272026,0.000118805656,0.000020746746,0.000022778842,0.0000030596032,2.1900993e-7,0.000018664829,0.00006510276,0.9838194,0.00021025375],"about_ca_topic_score_codex":0.001722621,"about_ca_topic_score_gemma":0.00010231683,"teacher_disagreement_score":0.16891661,"about_ca_system_score_codex":0.000052045038,"about_ca_system_score_gemma":0.00012684382,"threshold_uncertainty_score":0.9996258},"labels":[],"label_agreement":null},{"id":"W2397952786","doi":"10.1177/014556130608500910","title":"Do Corticosteroids Prevent Hearing Loss in Pediatric Bacterial Meningitis? An Analysis of the Evidence","year":2006,"lang":"en","type":"article","venue":"Ear Nose & Throat Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Columbia College","funders":"","keywords":"Dexamethasone; Medicine; Meningitis; Randomized controlled trial; Hearing loss; Meta-analysis; Corticosteroid; Retrospective cohort study; Pediatrics; Sensorineural hearing loss; MEDLINE; Intensive care medicine; Internal medicine; Audiology; Biology","score_opus":0.023215130945632354,"score_gpt":0.27850862922810554,"score_spread":0.25529349828247316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397952786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974219,0.0009212942,0.000048621147,0.00008592507,0.001374768,0.00009307264,0.0000099289655,0.000009509378,0.00003496982],"genre_scores_gemma":[0.9992741,0.00024416414,0.000023768855,0.0000064746846,0.00032626378,0.0000028582551,0.000008884617,0.000008524171,0.0001050095],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987208,0.00034719243,0.0004970076,0.00016282765,0.00003560689,0.00023656109],"domain_scores_gemma":[0.9993185,0.000067738416,0.00028580954,0.00023212573,0.00007637157,0.00001945133],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000428456,0.00011769655,0.0003008056,0.0002478909,0.00019010513,0.00006300632,0.00020780656,0.00011456104,0.0010051128],"category_scores_gemma":[0.00005083088,0.00008299597,0.00018521838,0.0005178731,0.00005453427,0.00027380133,0.000080053615,0.00031081258,0.000014916634],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001229779,0.00033707617,0.6224009,0.0000054831653,0.00016458164,0.0000039413208,0.00027086836,0.00024788012,0.37547487,0.000046552173,0.00011720813,0.000807686],"study_design_scores_gemma":[0.00082735234,0.00021567203,0.9871686,0.0000460668,0.0004612275,0.00017736176,0.000039654602,0.000011187045,0.010615458,0.000056980356,0.00028037792,0.00010006428],"about_ca_topic_score_codex":0.00048025683,"about_ca_topic_score_gemma":0.00052766304,"teacher_disagreement_score":0.3648594,"about_ca_system_score_codex":0.000053709788,"about_ca_system_score_gemma":0.00006115771,"threshold_uncertainty_score":0.9999081},"labels":[],"label_agreement":null},{"id":"W2402170317","doi":"10.1093/pch/16.8.486","title":"Les vaccins contre le méningocoque au Canada : une mise à jour","year":2011,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"College of Family Physicians of Canada; Public Health Agency of Canada; Canadian Paediatric Society; Health Canada","funders":"","keywords":"Humanities; Medicine; Philosophy","score_opus":0.018729445333039118,"score_gpt":0.24151595416808988,"score_spread":0.22278650883505077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402170317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72762346,0.12672767,0.0003280658,0.082610555,0.028517842,0.001243697,0.000929258,0.0001824212,0.031837005],"genre_scores_gemma":[0.97992724,0.009881809,0.00013413135,0.0016212381,0.0021391,0.000021238606,0.00016686694,0.00005757403,0.006050805],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99693066,0.0005579753,0.0008040719,0.00048234424,0.000039094786,0.0011858669],"domain_scores_gemma":[0.9984184,0.00019133271,0.00051020173,0.00043137764,0.00018552851,0.0002631789],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00052031904,0.00040342004,0.0006808753,0.00017986323,0.0015678328,0.000022962538,0.00028909792,0.0005393244,0.0016382203],"category_scores_gemma":[0.00012342715,0.00040990676,0.00017196118,0.00053088955,0.00008434845,0.00012517095,0.00011324719,0.0009869889,0.00014953349],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051521434,0.0025546295,0.35898915,0.0012888096,0.0009790732,0.00004830522,0.013507753,0.000021058775,0.00052927464,0.07360683,0.4219586,0.12600133],"study_design_scores_gemma":[0.0020992118,0.0003604574,0.24408078,0.000104474406,0.00010017205,0.00021839546,0.0008965062,0.00000283079,0.00024867573,0.0001714529,0.75129956,0.0004174805],"about_ca_topic_score_codex":0.9937904,"about_ca_topic_score_gemma":0.9757027,"teacher_disagreement_score":0.32934096,"about_ca_system_score_codex":0.00070533477,"about_ca_system_score_gemma":0.006359771,"threshold_uncertainty_score":0.99983525},"labels":[],"label_agreement":null},{"id":"W2402200146","doi":"10.1016/s2214-109x(16)30064-x","title":"Seasonal dynamics of bacterial meningitis: a time-series analysis","year":2016,"lang":"en","type":"article","venue":"The Lancet Global Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fogarty International Center; NIH Office of the Director; Pan American Health Organization; Princeton University; Public Health England; European Centre for Disease Prevention and Control; Centers for Disease Control and Prevention; Robert Koch Institut; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; National Institutes of Health; Public Health Agency of Canada; Bill and Melinda Gates Foundation; Public Health Agency; U.S. Department of Homeland Security","keywords":"Meningitis; Neisseria meningitidis; Incidence (geometry); Seasonality; Epidemiology; Demography; Streptococcus pneumoniae; Outbreak; Disease; Biology; Medicine; Geography; Pediatrics; Ecology; Microbiology; Virology; Antibiotics; Internal medicine; Bacteria","score_opus":0.012522069711427587,"score_gpt":0.28716633209312326,"score_spread":0.27464426238169565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402200146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839612,0.00045939055,0.00049580046,0.011440483,0.000749479,0.000119317636,0.0017651962,0.00006934924,0.0009397817],"genre_scores_gemma":[0.99839765,0.00022688661,0.000085688334,0.000109780594,0.00019080182,0.0000065254594,0.00016929797,0.0000044007647,0.0008089507],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9991417,0.00019959622,0.00022234315,0.00013259643,0.000015571226,0.00028818438],"domain_scores_gemma":[0.9994656,0.00005278589,0.0001567774,0.00025559939,0.00004976768,0.00001945769],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027825378,0.00009484071,0.00040783442,0.000026440275,0.00013676519,0.000008706261,0.00016567884,0.00007387261,0.0015369907],"category_scores_gemma":[0.000025983334,0.000049910515,0.000099258,0.00027145393,0.00011581947,0.00006268847,0.00005811978,0.000049100017,0.00014437985],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065274164,0.0005481885,0.23834857,0.00011825288,0.00889982,0.0000020106122,0.00056050374,0.000015356489,0.15789606,0.2010784,0.13197854,0.25402686],"study_design_scores_gemma":[0.0051945103,0.0013445398,0.8458523,0.00015120453,0.0007174913,0.00018477302,0.00014344798,0.00003959756,0.004075083,0.005903246,0.13590647,0.00048730714],"about_ca_topic_score_codex":0.000478753,"about_ca_topic_score_gemma":0.0010144276,"teacher_disagreement_score":0.6075038,"about_ca_system_score_codex":0.00011059339,"about_ca_system_score_gemma":0.0001013669,"threshold_uncertainty_score":0.99937576},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2404397214","doi":"10.1093/pch/19.3.147","title":"Lignes directrices pour la prise en charge de la méningite bactérienne présumée ou confirmée chez les enfants canadiens de plus d'un mois","year":2014,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Paediatric Society","funders":"","keywords":"Humanities; Medicine; Physics; Gynecology; Philosophy","score_opus":0.008385922510091058,"score_gpt":0.2551416628646602,"score_spread":0.24675574035456915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404397214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9171553,0.05858532,0.0010341788,0.012773978,0.0033154148,0.00061505183,0.000495539,0.00022053292,0.0058046645],"genre_scores_gemma":[0.9525748,0.03825995,0.0008181673,0.00090909004,0.0025913743,0.00005701512,0.00016199377,0.00009459812,0.004533047],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99352473,0.0032781071,0.0007624546,0.0006498393,0.000052983727,0.00173186],"domain_scores_gemma":[0.99627084,0.0021392237,0.0005912673,0.00042977592,0.00014021927,0.000428669],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0037148984,0.000539954,0.00085622014,0.00040918676,0.0011390267,0.00012842954,0.00038917782,0.0011635752,0.000747138],"category_scores_gemma":[0.0008823904,0.0005475755,0.000240915,0.00053806533,0.00022029194,0.00015579353,0.0001393138,0.0012647203,0.00022909173],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007235383,0.0024176824,0.5440387,0.0024399415,0.0013231955,0.000054686458,0.042748053,0.00008497128,0.014375938,0.05456594,0.06483722,0.27239013],"study_design_scores_gemma":[0.0025197894,0.00039517737,0.23748322,0.00018872877,0.00023707256,0.0006723861,0.00023262654,0.00018076113,0.0017722677,0.00029164206,0.75539494,0.00063136924],"about_ca_topic_score_codex":0.06707198,"about_ca_topic_score_gemma":0.006571111,"teacher_disagreement_score":0.6905577,"about_ca_system_score_codex":0.0005800053,"about_ca_system_score_gemma":0.0014584797,"threshold_uncertainty_score":0.99969757},"labels":[],"label_agreement":null},{"id":"W2407132471","doi":"","title":"Difficulties associated with pertussis surveillance.","year":2004,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sante Montreal","funders":"","keywords":"Medicine","score_opus":0.012894044450916608,"score_gpt":0.18883511975455988,"score_spread":0.17594107530364328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407132471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99718696,0.00023961216,0.00001596246,0.00048086292,0.0005295169,0.00019271324,0.00001969824,0.0001353084,0.0011993927],"genre_scores_gemma":[0.99730265,0.000021337908,0.0000043427735,0.00004180443,0.000031832722,0.00031379567,0.0000704018,0.00000897297,0.0022048834],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994663,0.000041623094,0.00009578408,0.00012880935,0.000008056333,0.0002594439],"domain_scores_gemma":[0.999752,0.000037843587,0.000046666573,0.000102783335,0.000046071204,0.000014640643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009241015,0.00009078618,0.00014027528,0.000038810234,0.0001304276,0.000018140741,0.00005752513,0.000101446,0.00010151476],"category_scores_gemma":[0.000079189274,0.000060095088,0.00003556065,0.00011268452,0.000057068428,0.00005404989,0.000017153623,0.00008453728,0.00005228523],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012009231,0.0028129725,0.71152925,0.00003908192,0.003712705,0.000014723425,0.0014044465,0.0002451046,0.101446725,0.0051063513,0.018496672,0.15399103],"study_design_scores_gemma":[0.0013750766,0.0000346527,0.9856666,0.000004128757,0.000012549361,0.00001701114,0.000034990982,2.8544743e-8,0.00464145,0.000043025648,0.008063158,0.00010737294],"about_ca_topic_score_codex":0.00016278816,"about_ca_topic_score_gemma":0.00041583602,"teacher_disagreement_score":0.2741373,"about_ca_system_score_codex":0.000045210058,"about_ca_system_score_gemma":0.0000127805115,"threshold_uncertainty_score":0.24506065},"labels":[],"label_agreement":null},{"id":"W2412317353","doi":"10.1093/pch/16.8.485","title":"Meningococcal vaccines in Canada: An update","year":2011,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Paediatric Society","funders":"Health Canada; College of Family Physicians of Canada; Public Health Agency of Canada","keywords":"Medicine; Fulminant; Meningococcal disease; Conjugate vaccine; Meningitis; Meningococcal vaccine; Neisseria meningitidis; Meningococcal meningitis; Conjugate; Serotype; Booster dose; Immunization; Pediatrics; Meningococcal Infections; Immunology; Virology; Antigen; Biology","score_opus":0.01764342228866297,"score_gpt":0.23956023435323245,"score_spread":0.22191681206456948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412317353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932832,0.0025296411,0.00002947389,0.0009878078,0.0018640475,0.0002164738,0.000045673572,0.00005224491,0.0009914468],"genre_scores_gemma":[0.9980088,0.0007513799,0.00013012491,0.00075053895,0.00018427201,0.000014601459,0.00010934733,0.00001567209,0.00003527435],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987188,0.0001668646,0.00038207608,0.00025378753,0.000014751264,0.00046370082],"domain_scores_gemma":[0.999505,0.000029542869,0.00013177056,0.00022713396,0.000037909987,0.000068651534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028179341,0.0001454256,0.0002733686,0.00011707637,0.0002060063,0.0000062178124,0.00015568963,0.000103347484,0.0007080408],"category_scores_gemma":[0.000024988749,0.00013023315,0.000031623644,0.0002814708,0.000010755784,0.00010509531,0.00004792295,0.00031556844,0.000079049816],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001579988,0.00039057905,0.95456827,0.00004450038,0.00004669119,0.000004675683,0.0014222257,0.00000435432,0.00050907355,0.004443608,0.013301285,0.02510672],"study_design_scores_gemma":[0.0011398518,0.00019065052,0.9514859,0.000009695719,0.000011164515,0.000045854566,0.00019940556,0.0000048874826,0.00038431014,0.00018919123,0.046125185,0.00021394585],"about_ca_topic_score_codex":0.9036758,"about_ca_topic_score_gemma":0.93894875,"teacher_disagreement_score":0.035272934,"about_ca_system_score_codex":0.00025652998,"about_ca_system_score_gemma":0.0010198243,"threshold_uncertainty_score":0.77525496},"labels":[],"label_agreement":null},{"id":"W2412754135","doi":"10.1093/ije/dyv097.267","title":"Plans and Progress with Developing and Licensing a Hia Vaccine .","year":2015,"lang":"en","type":"article","venue":"International Journal of Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Environmental health; Medicine; Environmental planning; Virology; Geography","score_opus":0.056250702822887334,"score_gpt":0.33753296029516194,"score_spread":0.2812822574722746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412754135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98505676,0.0028828618,0.0014404552,0.009332736,0.0011756322,0.000038064878,0.0000054108004,0.0000086569735,0.00005939772],"genre_scores_gemma":[0.99500054,0.00030745476,0.003891724,0.00052705937,0.00020492396,0.0000012438163,0.000009365387,0.000006034964,0.000051662373],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99919856,0.000189917,0.00036884708,0.000101232086,0.000013240649,0.00012823283],"domain_scores_gemma":[0.998758,0.00036161995,0.000316715,0.000042918437,0.00048519584,0.000035560763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007758133,0.00008451157,0.00027474313,0.00013136944,0.00003633425,0.000010202192,0.00008599262,0.00009546763,0.000023460258],"category_scores_gemma":[0.0006917389,0.00005578842,0.000020634727,0.00003200216,0.000089779176,0.00012102779,0.000053768148,0.00016241091,0.000004977661],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015842045,0.00006042602,0.93729186,0.0000085359625,0.00088411954,0.000033628665,0.00045799123,0.000012729124,0.007925933,0.008464326,0.005275155,0.038001094],"study_design_scores_gemma":[0.0075430213,0.001588588,0.65363204,0.0003428651,0.000119008975,0.034993514,0.00051422097,0.000034604527,0.0022180825,0.0047927373,0.293889,0.00033231135],"about_ca_topic_score_codex":0.000045722907,"about_ca_topic_score_gemma":0.000037286187,"teacher_disagreement_score":0.28861383,"about_ca_system_score_codex":0.000027966375,"about_ca_system_score_gemma":0.00006292232,"threshold_uncertainty_score":0.22749856},"labels":[],"label_agreement":null},{"id":"W2412985272","doi":"10.1093/pch/19.3.141","title":"Guidelines for the management of suspected and confirmed bacterial meningitis in Canadian children older than one month of age","year":2014,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Neisseria meningitidis; Meningitis; Streptococcus pneumoniae; Vancomycin; Incidence (geometry); Haemophilus influenzae; Intensive care medicine; Antimicrobial; Pediatrics; Antibiotics; Bacterial meningitis; Position statement; Microbiology; Family medicine","score_opus":0.01877413979777647,"score_gpt":0.2721827779168219,"score_spread":0.2534086381190454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412985272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99121726,0.0030897479,0.000101455,0.003491476,0.0006930863,0.0009606262,0.00024014465,0.00001476764,0.00019146418],"genre_scores_gemma":[0.9965189,0.0025466748,0.00030354632,0.000115355404,0.00018701817,0.000029316843,0.0002393359,0.0000127364965,0.000047105397],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99888617,0.00009359101,0.0004860837,0.00017920208,0.000018581613,0.0003363499],"domain_scores_gemma":[0.9993218,0.00011824221,0.00021441044,0.00019130437,0.00010678736,0.000047430774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060565537,0.00011604725,0.00032743617,0.00017912166,0.0001713597,0.000008639281,0.000117164076,0.00010635928,0.00006449569],"category_scores_gemma":[0.00006767248,0.00009098523,0.00004930189,0.00018327813,0.000051902392,0.00002659297,0.000038995808,0.0001048089,0.000001410568],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010702742,0.0010951853,0.74455065,0.0016764388,0.0022849175,0.0000017463534,0.004090459,0.000051324787,0.010464222,0.06046476,0.024433909,0.14981614],"study_design_scores_gemma":[0.002568096,0.00023212345,0.9842661,0.00006660137,0.000066203094,0.000006497426,0.00006205264,0.000008763471,0.0004350009,0.00009933237,0.012083363,0.00010585145],"about_ca_topic_score_codex":0.21087614,"about_ca_topic_score_gemma":0.17580158,"teacher_disagreement_score":0.2397155,"about_ca_system_score_codex":0.00003566017,"about_ca_system_score_gemma":0.0000904861,"threshold_uncertainty_score":0.8392379},"labels":[],"label_agreement":null},{"id":"W2414226909","doi":"10.1016/j.vaccine.2016.06.025","title":"Rapid surveillance for health events following a mass meningococcal B vaccine program in a university setting: A Canadian Immunization Research Network study","year":2016,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Acadia University; Institut National de Santé Publique du Québec; St. Francis Xavier University; Izaak Walton Killam Health Centre; BC Children's Hospital; Dalhousie University; Nova Scotia Health Authority","funders":"Canadian Institutes of Health Research; Health Canada; GlaxoSmithKline; Canadian Immunization Research Network; Michael Smith Health Research BC; Public Health Agency of Canada","keywords":"Reactogenicity; Medicine; Vaccination; Meningococcal vaccine; Neisseria meningitidis; Immunization; Public health; Outbreak; Serotype; Pediatrics; Immunology; Environmental health; Virology; Antigen; Biology; Nursing","score_opus":0.027684377284065698,"score_gpt":0.3197950192138981,"score_spread":0.2921106419298324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414226909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99203336,0.0004268631,0.00031592496,0.004109538,0.0006901921,0.0022611977,0.000037255857,0.00008955479,0.00003610344],"genre_scores_gemma":[0.99849164,0.000085884596,0.00019877694,0.000027392738,0.00009962205,0.000052997824,0.00010108936,0.000022235958,0.00092036865],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976013,0.00082872616,0.00031617322,0.0003580097,0.000024865014,0.0008709446],"domain_scores_gemma":[0.9991133,0.0002711516,0.00009531669,0.00029459718,0.00015442658,0.00007119192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021984705,0.00015380894,0.0003394394,0.0003759327,0.0006330574,0.000014958936,0.00021322248,0.00014241335,0.00013452419],"category_scores_gemma":[0.00017496692,0.00012295875,0.000070341455,0.0008123717,0.000004876975,0.000118282296,0.000079033765,0.00019909388,0.000026675421],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008178207,0.0004394793,0.9290749,0.000018717159,0.00022174949,0.00000477569,0.00037672822,0.000009948354,0.012004834,0.00013401998,0.008016394,0.04888065],"study_design_scores_gemma":[0.010689156,0.0020635864,0.735119,0.00013235088,0.000014498711,0.0000068589825,0.0004778598,0.000019805566,0.00015990059,0.000073270356,0.2510039,0.00023986124],"about_ca_topic_score_codex":0.035513557,"about_ca_topic_score_gemma":0.2062642,"teacher_disagreement_score":0.24298748,"about_ca_system_score_codex":0.00037438524,"about_ca_system_score_gemma":0.00029306195,"threshold_uncertainty_score":0.97090906},"labels":[],"label_agreement":null},{"id":"W2414299710","doi":"10.1097/inf.0000000000000681","title":"Long-Term Trends in Invasive Haemophilus influenzae Type b Disease among Indigenous Australian Children Following use of PRP-OMP and PRP-T Vaccines","year":2015,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Incidence (geometry); Indigenous; Medicine; Haemophilus influenzae; Population; Demography; Confidence interval; Pediatrics; Internal medicine; Biology; Environmental health; Microbiology","score_opus":0.024192444369535243,"score_gpt":0.2650486456024714,"score_spread":0.24085620123293613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414299710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99525744,0.002752265,0.000003579697,0.000099934405,0.0014218712,0.00034531663,0.000054037537,0.000050376304,0.000015163538],"genre_scores_gemma":[0.9983084,0.00074042706,0.000003102139,0.00004038719,0.0005211201,0.000015686384,0.000058125162,0.0000309741,0.0002817846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983144,0.0003687313,0.0005621892,0.00023201866,0.0000655378,0.0004571429],"domain_scores_gemma":[0.9986828,0.00014262105,0.00039408766,0.00030370476,0.00019316483,0.00028364875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034318562,0.00030010473,0.0003906135,0.0006729108,0.0003841069,0.00012565883,0.00020034885,0.00015898544,0.000109218294],"category_scores_gemma":[0.0004323949,0.00021853478,0.00020405732,0.000690834,0.000090350724,0.00052360614,0.00013342229,0.0005118837,0.000021318325],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049214857,0.000327427,0.9963807,0.000023058126,0.00023590622,0.000040533545,0.0006232029,0.0002421981,0.00020686435,0.000007067808,0.00060338166,0.00081753044],"study_design_scores_gemma":[0.0025499198,0.00023840464,0.995626,0.0000351024,0.0007215288,0.00027067537,0.000033234952,0.0000012308382,0.000037412294,0.00018926643,0.000046956502,0.00025028747],"about_ca_topic_score_codex":0.00069889164,"about_ca_topic_score_gemma":0.00029939858,"teacher_disagreement_score":0.0030509376,"about_ca_system_score_codex":0.000095194344,"about_ca_system_score_gemma":0.00037100603,"threshold_uncertainty_score":0.89115894},"labels":[],"label_agreement":null},{"id":"W2415791679","doi":"10.1385/1-59259-148-5:339","title":"T-Cell Responses Against Meningococcal Antigens","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute; BC Research (Canada)","funders":"","keywords":"Major histocompatibility complex; Antigen-presenting cell; Antigen; Biology; Cell biology; T cell; Cytotoxic T cell; Antigen presentation; MHC class II; Immune system; Antigen processing; Cytokine; MHC class I; Immunology; Biochemistry; In vitro","score_opus":0.04659484346499373,"score_gpt":0.2666501837175069,"score_spread":0.22005534025251314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415791679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81475294,0.0029308037,0.000037103444,0.00000617338,0.0008491294,0.0001663061,0.000012974366,0.0001219227,0.18112266],"genre_scores_gemma":[0.9536663,0.00009930873,0.000044106866,0.00006094288,0.00004417803,0.000029729248,0.000014639022,0.000018288287,0.04602248],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990538,0.000238293,0.0001943707,0.00022210779,0.00001028975,0.00028113296],"domain_scores_gemma":[0.999533,0.000059925824,0.000065220505,0.0002780229,0.000043321616,0.000020525233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014700177,0.00014602797,0.00017356178,0.00006871403,0.0002988776,0.000031709274,0.000109231456,0.00015866024,0.0003339138],"category_scores_gemma":[0.000031395313,0.00013047314,0.00007455708,0.000013103692,0.00008328356,0.000035869954,0.000039364168,0.0001660057,0.00014944318],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001000167,0.000092156384,0.00013831665,0.000014064296,0.00008145735,0.0000036808974,0.0004141415,0.0000017337435,0.9666098,0.017295472,0.011009928,0.0042392625],"study_design_scores_gemma":[0.0006068009,0.000056596313,0.00036381668,0.0000070775577,0.00001717765,0.00001416052,0.000025774116,2.736491e-7,0.33931082,0.000054921555,0.65941757,0.00012501245],"about_ca_topic_score_codex":0.00009018191,"about_ca_topic_score_gemma":0.000018731474,"teacher_disagreement_score":0.64840764,"about_ca_system_score_codex":0.000011626457,"about_ca_system_score_gemma":0.000026310317,"threshold_uncertainty_score":0.532054},"labels":[],"label_agreement":null},{"id":"W2417764104","doi":"","title":"Vaccinating against paralysis.","year":2001,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Paralysis; Medicine; Physical medicine and rehabilitation; Surgery","score_opus":0.020369149174309514,"score_gpt":0.2214657456868963,"score_spread":0.2010965965125868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417764104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98143023,0.00042520108,0.000034561184,0.0003486524,0.0008902635,0.0001686459,0.0000023852097,0.000108279986,0.01659177],"genre_scores_gemma":[0.993303,0.000090062604,0.000009661035,0.00012226097,0.0000884337,0.0003459735,0.000028149938,0.0000072546386,0.0060051903],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9993952,0.000049588412,0.00014022115,0.00013428106,0.000005194362,0.00027552602],"domain_scores_gemma":[0.99973696,0.00003351246,0.000047402867,0.00013737111,0.000029624156,0.0000151167405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001419071,0.00007627057,0.00012113574,0.000064160515,0.00013343558,0.000017372762,0.00007560776,0.0000883871,0.00038148236],"category_scores_gemma":[0.00005972996,0.0000642025,0.00005732201,0.0001512295,0.000012907122,0.000079337755,0.00003152256,0.000091588176,0.00026844564],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049101865,0.00012339711,0.0691108,0.0000041963503,0.00017591762,0.0000024479127,0.000050130107,0.000007854637,0.04225726,0.00052577804,0.007229146,0.88046396],"study_design_scores_gemma":[0.00061017874,0.000008702025,0.58135056,0.0000016375069,0.000022236209,0.000037239013,0.000027285088,0.0000014146825,0.008797294,0.00007917804,0.40894672,0.00011754465],"about_ca_topic_score_codex":0.000043375967,"about_ca_topic_score_gemma":0.00002328779,"teacher_disagreement_score":0.8803464,"about_ca_system_score_codex":0.000016238,"about_ca_system_score_gemma":0.000004105112,"threshold_uncertainty_score":0.41769642},"labels":[],"label_agreement":null},{"id":"W2419139831","doi":"10.1016/j.annemergmed.2007.08.018","title":"Corticosteroids for Acute Bacterial Meningitis","year":2008,"lang":"en","type":"letter","venue":"Annals of Emergency Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Meningitis; Bacterial meningitis; Intensive care medicine; Pediatrics","score_opus":0.11534953439045384,"score_gpt":0.37238010522063036,"score_spread":0.25703057083017655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419139831","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14971866,0.0103829345,0.00013667427,0.7485046,0.08496847,0.001394987,0.0018097601,0.0001605399,0.0029233794],"genre_scores_gemma":[0.03647494,0.18151361,0.00019272017,0.275035,0.1026506,0.0014612202,0.07214024,0.0008368058,0.32969487],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99789643,0.000103322374,0.00105606,0.00039419567,0.00003880087,0.00051118265],"domain_scores_gemma":[0.99829316,0.00012990487,0.00059079536,0.00043622067,0.0005252531,0.000024669454],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001601814,0.00038306118,0.000995344,0.00023965414,0.00015606557,0.0000017729568,0.0002820069,0.0009811516,0.016236203],"category_scores_gemma":[0.00020067867,0.00030483602,0.00036245433,0.00015419495,0.00016352313,0.00007530719,0.00005553684,0.00054696534,0.00008133093],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014701913,0.0000329709,0.000045364908,0.00007809871,0.0010906248,0.00000446099,0.0001032228,2.8133112e-8,0.18550539,0.000012263195,0.81239754,0.0005830055],"study_design_scores_gemma":[0.0010068457,0.0014945541,0.00028284275,0.0001312708,0.00042016798,0.00006557221,0.00000785113,1.5246175e-7,0.017694732,0.00011187798,0.97851205,0.00027207084],"about_ca_topic_score_codex":0.0002545489,"about_ca_topic_score_gemma":0.00001075381,"teacher_disagreement_score":0.4734696,"about_ca_system_score_codex":0.000007231014,"about_ca_system_score_gemma":0.000052400952,"threshold_uncertainty_score":0.9999404},"labels":[],"label_agreement":null},{"id":"W2419522799","doi":"10.1016/j.respe.2015.09.006","title":"Étude des déterminants de la couverture vaccinale de la campagne de vaccination contre la méningite à méningocoque A au Burkina Faso","year":2015,"lang":"fr","type":"article","venue":"Revue d Épidémiologie et de Santé Publique","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Vaccination; Medicine; Logistic regression; Demography; Immunization; Population; Cluster (spacecraft); Geography; Environmental health; Immunology","score_opus":0.021844763911060112,"score_gpt":0.32613076578833605,"score_spread":0.30428600187727595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419522799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9635475,0.012617426,0.00996625,0.0022084713,0.0014486983,0.000595482,0.0001692113,0.00034157763,0.009105367],"genre_scores_gemma":[0.98153657,0.008853687,0.002579494,0.0008126259,0.00093571784,0.00023888187,0.0001708222,0.00010292735,0.0047692894],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9865405,0.010147398,0.0007681544,0.00075435446,0.000044369644,0.0017452287],"domain_scores_gemma":[0.9931925,0.0048413654,0.0005440667,0.0006182262,0.00046267034,0.00034116925],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00836329,0.00071062293,0.0010227626,0.0003803752,0.0004757894,0.00034604955,0.00068753393,0.0031799853,0.00044184327],"category_scores_gemma":[0.008600753,0.00069626194,0.00034651396,0.0005079204,0.00045421976,0.00068096013,0.00033930884,0.0019261668,0.000061849445],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00097137364,0.001246257,0.8059316,0.00069840427,0.0006917229,0.00049759593,0.010077188,0.0007310323,0.0891373,0.020624207,0.03261058,0.03678272],"study_design_scores_gemma":[0.0036488406,0.0008355437,0.74997455,0.00078374456,0.00031295174,0.010127177,0.001002817,0.00041544603,0.008362957,0.008880788,0.21475534,0.0008998424],"about_ca_topic_score_codex":0.0057609137,"about_ca_topic_score_gemma":0.001834147,"teacher_disagreement_score":0.18214476,"about_ca_system_score_codex":0.0022154602,"about_ca_system_score_gemma":0.0038401752,"threshold_uncertainty_score":0.9997502},"labels":[],"label_agreement":null},{"id":"W2426289498","doi":"10.1080/20477724.2016.1195072","title":"Meningococcal B vaccination: real-world experience and future perspectives","year":2016,"lang":"en","type":"review","venue":"Pathogens and Global Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; Meningococcal disease; Meningococcal vaccine; Neisseria meningitidis; Medicine; Reverse vaccinology; Immunization; Outbreak; Vaccination schedule; Intervention (counseling); Conjugate vaccine; Disease; Environmental health; Virology; Immunology; Intensive care medicine; Antigen; Biology","score_opus":0.025399590218314793,"score_gpt":0.3688753718674492,"score_spread":0.3434757816491344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2426289498","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00050323637,0.9957258,0.000010475382,0.0003795898,0.0010789204,0.0004409749,0.00060261163,0.0000631818,0.0011951996],"genre_scores_gemma":[0.00030848422,0.99836385,0.00004422573,0.000031959047,0.00056573405,0.000066847664,0.00007972605,0.00001531119,0.00052387966],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99837697,0.00027755345,0.0004113234,0.00054001756,0.000016823893,0.00037729554],"domain_scores_gemma":[0.99931806,0.00005124792,0.00026545895,0.00022131235,0.00006260296,0.00008130519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019067104,0.00034336795,0.0010372527,0.00009328311,0.0004306585,0.00003652506,0.00009136148,0.00030280315,0.0004018573],"category_scores_gemma":[0.000011238073,0.0002250418,0.00012545858,0.00022858627,0.000072847,0.00007435606,0.00010619651,0.00018447224,0.00004240639],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010002131,0.000031479376,0.00010806779,0.00080683944,0.00006231474,0.0000010618654,0.00027102735,6.129222e-10,0.0000069881066,0.012762511,0.000784452,0.9851553],"study_design_scores_gemma":[0.00027314795,0.0001330975,0.0027297416,0.00084910885,0.00005955941,0.0002888779,0.0002719509,3.086117e-8,4.3828018e-7,0.00007298925,0.9950932,0.00022780418],"about_ca_topic_score_codex":0.0002521317,"about_ca_topic_score_gemma":0.00018644628,"teacher_disagreement_score":0.9943088,"about_ca_system_score_codex":0.0001962234,"about_ca_system_score_gemma":0.00020347004,"threshold_uncertainty_score":0.91769385},"labels":[],"label_agreement":null},{"id":"W2428792009","doi":"10.1097/inf.0000000000001278","title":"Do Dose Numbers Matter?","year":2016,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Alberta Children's Hospital; Izaak Walton Killam Health Centre; Canadian Institutes of Health Research; Dalhousie University; BC Children's Hospital; Michael Smith Health Research BC; University of Calgary","funders":"","keywords":"Toddler; Medicine; Toxoid; Confidence interval; Conjugate vaccine; Tetanus; Titer; Vaccination; Pediatrics; Effective dose (radiation); Immunology; Internal medicine; Immunization; Antibody; Nuclear medicine","score_opus":0.0075546305697839,"score_gpt":0.23225784358550197,"score_spread":0.22470321301571808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2428792009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99162316,0.0009745656,0.00017770387,0.0013385939,0.0039025242,0.000121415556,0.000027681564,0.00007728648,0.0017570938],"genre_scores_gemma":[0.9952425,0.0009401478,0.0000025129586,0.00014402218,0.0014531378,0.000014704831,0.0000018576003,0.000019499437,0.0021816636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998936,0.00024469793,0.00027982667,0.00015561293,0.00002696306,0.0003568913],"domain_scores_gemma":[0.9991587,0.00019739174,0.0001867647,0.00026615008,0.00010257801,0.00008843721],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002900203,0.00016596956,0.00015228547,0.00013207406,0.0006861666,0.00007917326,0.0001919212,0.00009146188,0.009062844],"category_scores_gemma":[0.00010763031,0.000079558,0.00019204461,0.0001800331,0.0000744664,0.00018228174,0.00006611736,0.00026596058,0.00513053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001708399,0.00017344416,0.92849416,0.000007536229,0.00012359912,0.0000063059942,0.000068387286,0.0000034809534,0.007020496,0.00023403189,0.05922536,0.004472356],"study_design_scores_gemma":[0.0040064645,0.00017728974,0.9318413,0.000024401306,0.0006372263,0.0034347593,0.000045888984,2.9040027e-7,0.00020421503,0.006619601,0.052567586,0.00044097131],"about_ca_topic_score_codex":0.000030995845,"about_ca_topic_score_gemma":0.000004586952,"teacher_disagreement_score":0.006816281,"about_ca_system_score_codex":0.00006683068,"about_ca_system_score_gemma":0.000112277085,"threshold_uncertainty_score":0.9956441},"labels":[],"label_agreement":null},{"id":"W2433518607","doi":"10.1385/1-59259-294-5:241","title":"Analysis of Bacterial Glycolipids by Capillary Electrophoresis-Electrospray Mass Spectrometry: Haemophilus influenzae and Neisseria meningitidis Lipopolysaccharides","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences; Caprion (Canada)","funders":"University of Oxford","keywords":"Microbiology; Haemophilus influenzae; Neisseria meningitidis; Neisseria; Biology; Moraxella catarrhalis; Virulence; Haemophilus ducreyi; Innate immune system; Immune system; Pasteurellaceae; Bacteria; Virology; Immunology; Antibiotics","score_opus":0.015413137993430142,"score_gpt":0.24167257776099763,"score_spread":0.2262594397675675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2433518607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841427,0.012435523,0.00012865984,0.0000085806605,0.0004656236,0.0002535806,0.000093957424,0.000081051556,0.0023903216],"genre_scores_gemma":[0.997596,0.0008515693,0.000093579234,0.000026389383,0.00006733157,0.000043278127,0.00012893809,0.0000350373,0.0011578245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820274,0.00026107236,0.0005113392,0.00046714157,0.000032535987,0.0005251845],"domain_scores_gemma":[0.9990736,0.00008602917,0.00026594152,0.00042672936,0.00009493136,0.00005271542],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020897962,0.00032940073,0.0007491574,0.00043711317,0.0002792495,0.00007595859,0.0001881284,0.00028829247,0.00081674993],"category_scores_gemma":[0.000057334448,0.00031181448,0.00019486234,0.0002070531,0.00018547178,0.00010054783,0.00005581099,0.00023878827,0.000005221373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023661974,0.000056929402,0.00045910245,0.000020994627,0.0023810456,8.8065514e-7,0.00019825906,0.0000022114004,0.9892273,0.005503907,0.0014203732,0.00049239886],"study_design_scores_gemma":[0.0011236521,0.0004389157,0.0017576023,0.000011788569,0.0013868884,0.000024081966,0.000033957298,0.00000484436,0.9175602,0.00022890528,0.07706437,0.00036475612],"about_ca_topic_score_codex":0.001110461,"about_ca_topic_score_gemma":0.00016604556,"teacher_disagreement_score":0.075644,"about_ca_system_score_codex":0.00005165561,"about_ca_system_score_gemma":0.000049214614,"threshold_uncertainty_score":0.9999334},"labels":[],"label_agreement":null},{"id":"W2434804782","doi":"10.1017/cjn.2015.142","title":"Redefining true leukocytosis in the traumatic lumbar puncture","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Saskatoon Medical Imaging","funders":"","keywords":"Leukocytosis; Medicine; Cerebrospinal fluid; Lumbar puncture; CSF albumin; Gastroenterology; Meningitis; Internal medicine; White blood cell; Lumbar; Surgery","score_opus":0.0655583777600428,"score_gpt":0.27270167940946205,"score_spread":0.20714330164941924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2434804782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98743975,0.0019981342,0.000007964425,0.0054187565,0.0018611085,0.000120395336,0.0000056275644,0.000011333015,0.0031369568],"genre_scores_gemma":[0.9973795,0.0001486928,0.00021064105,0.00205527,0.00016891495,0.000003438641,4.6966971e-7,0.0000064371193,0.000026631202],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9958739,0.0018035058,0.0007879879,0.00033386608,0.00016212439,0.0010385611],"domain_scores_gemma":[0.9981567,0.00046392376,0.0005210545,0.00014405709,0.00026090958,0.00045334766],"candidate_categories":["sts"],"consensus_categories":["sts"],"category_scores_codex":[0.006318178,0.000260901,0.00044427844,0.0007530505,0.001894027,0.0005307228,0.0019021287,0.00024781402,0.0002098331],"category_scores_gemma":[0.0024326919,0.00013852442,0.00017893303,0.0013113577,0.0034280617,0.00070182583,0.00004240497,0.0013989507,0.000012105997],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014086203,0.00009632255,0.9691524,0.000007250815,0.000035560697,0.0019994855,0.005019393,0.002816814,0.0008050464,0.0031849728,0.008580006,0.00816189],"study_design_scores_gemma":[0.0018929364,0.09991236,0.6720136,0.000102622944,0.00011018075,0.13592789,0.0062999064,0.00020731728,0.0003705288,0.035000533,0.04738624,0.0007759052],"about_ca_topic_score_codex":0.0032827517,"about_ca_topic_score_gemma":0.11853645,"teacher_disagreement_score":0.2971388,"about_ca_system_score_codex":0.00015634019,"about_ca_system_score_gemma":0.0022319308,"threshold_uncertainty_score":0.9994054},"labels":[],"label_agreement":null},{"id":"W2439743251","doi":"10.1385/1-59259-149-3:341","title":"Epidemiology of Meningococcal Disease in North America","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Women's Health Research Institute; BC Children's Hospital; BC Research (Canada)","funders":"","keywords":"Epidemiology; Meningococcal disease; Disease; Medicine; Biology; Neisseria meningitidis; Pathology; Genetics","score_opus":0.05979749827585751,"score_gpt":0.29220792304002796,"score_spread":0.23241042476417045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2439743251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868273,0.004335924,0.00007354905,0.00000982184,0.00037081455,0.00017895474,0.000020152316,0.000031599982,0.008151844],"genre_scores_gemma":[0.998284,0.00006257563,0.000040445833,0.000040947194,0.000016258151,0.000045317287,0.000025128496,0.000008101411,0.0014772277],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99892664,0.00035922273,0.00030477962,0.00017909484,0.0000052131286,0.00022502473],"domain_scores_gemma":[0.999493,0.00013081176,0.00010803927,0.00021991383,0.000025593981,0.000022654145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012088202,0.00010222348,0.0002775965,0.00007215268,0.000056505687,0.0000011026063,0.0000896204,0.000077275065,0.00022209229],"category_scores_gemma":[0.00013951444,0.00008961913,0.000062338404,0.000020781114,0.00013916624,0.000021909233,0.000033333337,0.00013082752,0.000020279263],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001000205,0.0009156509,0.65372217,0.0002074512,0.0005316575,0.000014916365,0.0026955863,0.0004056172,0.03918376,0.25821334,0.0033339171,0.039775733],"study_design_scores_gemma":[0.0017651684,0.00020207402,0.3644271,0.00003094126,0.00006615601,0.000008364465,0.000041363586,0.000008762623,0.0069069564,0.0009951745,0.6252357,0.00031229618],"about_ca_topic_score_codex":0.00072678505,"about_ca_topic_score_gemma":0.000298773,"teacher_disagreement_score":0.62190175,"about_ca_system_score_codex":0.000009618312,"about_ca_system_score_gemma":0.000020498574,"threshold_uncertainty_score":0.3654562},"labels":[],"label_agreement":null},{"id":"W2461843443","doi":"10.1097/inf.0000000000000917","title":"Severe Upper Extremity Dysfunction After 4CMenB Vaccination in a Young Infant","year":2015,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Reactogenicity; Vaccination; Pediatrics; Myositis; Adverse effect; myalgia; Discontinuation; Magnetic resonance imaging; Dermatology; Surgery; Immunology; Radiology; Internal medicine; Immune system; Immunization","score_opus":0.008796764339524598,"score_gpt":0.22819017431303606,"score_spread":0.21939340997351148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461843443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99239004,0.001543101,0.00017901651,0.0002773223,0.0041837767,0.00023096317,0.0000148443805,0.000066343906,0.001114622],"genre_scores_gemma":[0.9979027,0.00038209595,0.0000047789977,0.00007016005,0.0010431636,0.00005280177,0.000013044815,0.000017099033,0.00051418407],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986762,0.00038284186,0.00037727153,0.0001817004,0.000049521695,0.00033246377],"domain_scores_gemma":[0.9992041,0.00007366556,0.00019390472,0.00020712733,0.00022074635,0.00010046086],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00066871505,0.00018659381,0.00018333262,0.00031726176,0.0003055238,0.0000890615,0.000115454335,0.00014525092,0.001159696],"category_scores_gemma":[0.00027904776,0.00012764722,0.00013027726,0.0003892326,0.000020971635,0.00037010887,0.00006748441,0.00057040143,0.00032171866],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005283146,0.00023021156,0.9932146,0.000008933892,0.000040619358,0.000007085121,0.00035875067,0.00013120827,0.00019172978,0.00003764179,0.004264107,0.0009868154],"study_design_scores_gemma":[0.0026241592,0.00010748167,0.99173385,0.000007983012,0.00020781744,0.0014750825,0.00012708541,0.000024916602,0.00001462168,0.0016300012,0.0018342639,0.00021275469],"about_ca_topic_score_codex":0.00028500834,"about_ca_topic_score_gemma":0.000274372,"teacher_disagreement_score":0.0055126618,"about_ca_system_score_codex":0.00024751318,"about_ca_system_score_gemma":0.00023302303,"threshold_uncertainty_score":0.99975336},"labels":[],"label_agreement":null},{"id":"W2466737687","doi":"10.5539/gjhs.v9n2p76","title":"Lessons Learnt from Cerebrospinal Meningitis Outbreak Surveillance Data-A Case for Public Health Action","year":2016,"lang":"en","type":"article","venue":"Global Journal of Health Science","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Meningitis; Outbreak; Neisseria meningitidis; Cerebrospinal meningitis; Public health; Incidence (geometry); Disease surveillance; Vaccination; Lumbar puncture; Christian ministry; Cerebrospinal fluid; Environmental health; Pediatrics; Immunology; Internal medicine; Virology; Pathology; Biology","score_opus":0.14796019028986665,"score_gpt":0.40219132457756906,"score_spread":0.2542311342877024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466737687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9286757,0.0020132356,0.015992124,0.04669225,0.005171117,0.00019867656,0.0012073667,0.000027469188,0.000022027163],"genre_scores_gemma":[0.9982402,0.00042321888,0.00087398867,0.00021938083,0.00017972066,0.000002305748,0.00002374466,0.0000047191324,0.00003276197],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99814296,0.00018404106,0.0006764815,0.00032198607,0.00006174845,0.0006127653],"domain_scores_gemma":[0.9981116,0.000098743745,0.0009122447,0.00034545964,0.00038378703,0.00014814346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030544058,0.00011990487,0.0003712632,0.00010099485,0.0009372968,0.00007882637,0.0005191677,0.00006792119,0.00009296656],"category_scores_gemma":[0.00029985368,0.00007794724,0.0000619894,0.00031832006,0.00025564517,0.00079644757,0.00014010872,0.00013009719,0.000024951327],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023849025,0.00025135124,0.05437608,0.000036997502,0.00010009654,0.000013737645,0.00010061218,0.0000027131875,0.047869675,0.0017405945,0.028347868,0.8669218],"study_design_scores_gemma":[0.0054021147,0.003176574,0.515782,0.0002726392,0.000022152777,0.03595165,0.00076532515,0.00001900107,0.001551232,0.0010692446,0.43554947,0.00043864019],"about_ca_topic_score_codex":0.0024732857,"about_ca_topic_score_gemma":0.0011863332,"teacher_disagreement_score":0.86648315,"about_ca_system_score_codex":0.00045280595,"about_ca_system_score_gemma":0.0019901115,"threshold_uncertainty_score":0.7209024},"labels":[],"label_agreement":null},{"id":"W2466870107","doi":"","title":"Simultaneous administration of meningococcal C conjugate vaccine and diphtheria-tetanus-acellular pertussis-inactivated poliovirus-Haemophilus influenzae type b conjugate vaccine in children: a randomized double-blind study.","year":2002,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Medicine; Diphtheria; Tetanus; Conjugate vaccine; Poliovirus; Vaccination; Immunogenicity; Immunization; Meningococcal vaccine; Pediatrics; Adverse effect; Pneumococcal conjugate vaccine; Immunology; Virology; Antibody; Internal medicine; Antibiotics; Microbiology; Streptococcus pneumoniae; Virus","score_opus":0.024694556685374437,"score_gpt":0.24916516568958577,"score_spread":0.22447060900421134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466870107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99276626,0.0019245287,0.0000048056163,0.000289036,0.0004317616,0.004257164,0.000028564446,0.00009275939,0.00020514186],"genre_scores_gemma":[0.99826866,0.00029770072,0.00000735386,0.000047629215,0.00008654969,0.00069964834,0.00008127877,0.000040236453,0.00047093807],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99737763,0.0005261411,0.0009900512,0.0005190762,0.00004662324,0.0005404481],"domain_scores_gemma":[0.9986153,0.00033944397,0.00041971236,0.0003707728,0.0001751683,0.000079550104],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00066313986,0.00040751355,0.0011875335,0.0003454985,0.00016583723,0.000055941375,0.00017731017,0.00032623616,0.0004696505],"category_scores_gemma":[0.0003447166,0.00033340498,0.00011659728,0.0005149242,0.000098877186,0.00021165184,0.00010127431,0.00034676294,0.000030148012],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.71208096,0.0037548074,0.06651504,0.00006957231,0.0030976841,0.000053370968,0.0015151147,0.00011043976,0.20046741,0.00024829243,0.00018383701,0.011903495],"study_design_scores_gemma":[0.77217084,0.0014302147,0.15153629,0.000047549962,0.0007242166,0.0006112237,0.00022418279,0.00019567662,0.07025821,0.00006579155,0.0018071033,0.000928722],"about_ca_topic_score_codex":0.00076936645,"about_ca_topic_score_gemma":0.00016496179,"teacher_disagreement_score":0.13020921,"about_ca_system_score_codex":0.00005293242,"about_ca_system_score_gemma":0.000026570244,"threshold_uncertainty_score":0.9999118},"labels":[],"label_agreement":null},{"id":"W2472755978","doi":"10.1385/1-59259-148-5:23","title":"Immune Response and Host-Pathogen Interactions","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute; Children’s Health Research Institute; Children's & Women's Health Centre of British Columbia; BC Research (Canada)","funders":"","keywords":"Pathogen; Neisseria meningitidis; Immune system; Human pathogen; Biology; Disease; Immunology; Colonization; Host (biology); Virology; Microbiology; Medicine; Genetics; Bacteria; Pathology","score_opus":0.03662369709088818,"score_gpt":0.2745029974640683,"score_spread":0.2378793003731801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472755978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96852404,0.0043676207,0.000034999648,0.000026072394,0.0009855978,0.00016514707,0.000020911602,0.00008337428,0.025792234],"genre_scores_gemma":[0.97315466,0.00007235848,0.000033754746,0.000029749644,0.000023928087,0.000040782354,0.000008069371,0.00001287504,0.02662381],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992144,0.0002770902,0.00016563066,0.00016896399,0.0000062924987,0.0001676249],"domain_scores_gemma":[0.99957776,0.0000922516,0.000053670185,0.00022221605,0.0000385993,0.000015486648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017824185,0.0001087231,0.00013834413,0.00006735398,0.00027172375,0.000031213716,0.0000592031,0.00008630206,0.00040009187],"category_scores_gemma":[0.000061506216,0.00009818016,0.000044960616,0.000010358402,0.000074703625,0.00005316401,0.00004339093,0.00014910045,0.0000566256],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023649244,0.000036463625,0.000032948847,0.0000055743567,0.00008021067,0.0000014313226,0.0004422741,1.3044286e-7,0.9812087,0.01437543,0.0007965558,0.0027838214],"study_design_scores_gemma":[0.0006286666,0.000085732034,0.007175487,0.000013275814,0.000034594857,0.00012851645,0.00006583121,2.974595e-7,0.14919384,0.00009316553,0.8424537,0.00012687319],"about_ca_topic_score_codex":0.00016500846,"about_ca_topic_score_gemma":0.000036853253,"teacher_disagreement_score":0.84165716,"about_ca_system_score_codex":0.000010814597,"about_ca_system_score_gemma":0.0000142187355,"threshold_uncertainty_score":0.43807253},"labels":[],"label_agreement":null},{"id":"W2473085589","doi":"","title":"Effectiveness of serogroup C meningococcal conjugate vaccine (C-MCV) : a 5-year follow-up in Quebec, Canada","year":2007,"lang":"en","type":"article","venue":"45th Annual Meeting","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal vaccine; Meningococcal disease; Virology; Meningococcal meningitis; Medicine; Neisseria meningitidis; Conjugate vaccine; Geography; Immunogenicity; Biology; Immunization; Immunology; Antigen","score_opus":0.006086636752605008,"score_gpt":0.23299750225563448,"score_spread":0.22691086550302947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473085589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970992,0.00032397924,0.000032258435,0.000044537297,0.0014006858,0.00024851016,0.000034315362,0.000036474124,0.0007800205],"genre_scores_gemma":[0.99936587,0.000006564608,0.00002857497,0.000018519651,0.00005571447,0.000012592885,0.00004961481,0.000017259283,0.00044530674],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99857104,0.0002541603,0.00043995865,0.00025430552,0.000025055546,0.00045546383],"domain_scores_gemma":[0.99907506,0.000443704,0.00014582562,0.00015948515,0.00014073554,0.00003518629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010187642,0.00017816958,0.00039557047,0.00012809144,0.000108613436,0.000009122238,0.00012564796,0.00017842119,0.0001175496],"category_scores_gemma":[0.00022321027,0.0001637518,0.00006173261,0.00027576534,0.00003011983,0.00011207936,0.000076388365,0.0002372019,0.00001340475],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017065966,0.000097193195,0.19165926,0.00013015179,0.00012658324,0.000009984739,0.0005456371,0.000018748877,0.80230844,0.00045270636,0.0006905759,0.0022541555],"study_design_scores_gemma":[0.0066037667,0.00026906776,0.5851583,0.00042251786,0.000045087698,0.000027395541,0.0020623838,0.0000027215383,0.38910568,0.000031963657,0.015893457,0.00037764854],"about_ca_topic_score_codex":0.8382562,"about_ca_topic_score_gemma":0.9431776,"teacher_disagreement_score":0.41320273,"about_ca_system_score_codex":0.0001115171,"about_ca_system_score_gemma":0.00015682631,"threshold_uncertainty_score":0.66776043},"labels":[],"label_agreement":null},{"id":"W2474502124","doi":"10.1128/mbio.00940-16","title":"LPS Remodeling Triggers Formation of Outer Membrane Vesicles in <i>Salmonella</i>","year":2016,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":176,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biogenesis; Bacterial outer membrane; Vesicle; Membrane curvature; Cell biology; Lipid A; Biology; Salmonella enterica; Context (archaeology); Lipid bilayer; Chemistry; Microbiology; Bacteria; Salmonella; Membrane; Biochemistry; Escherichia coli; Genetics; Gene","score_opus":0.01726043502707634,"score_gpt":0.22886441888174783,"score_spread":0.2116039838546715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474502124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796337,0.00019291902,0.00040037747,0.00034980706,0.0003824368,0.00006962273,0.000009455398,0.000022565207,0.0006094232],"genre_scores_gemma":[0.9993136,0.000109778506,0.000040164072,0.000020909172,0.00002500699,0.000004141081,0.000009967284,0.0000049374553,0.0004715119],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995328,0.00004418041,0.00021576961,0.00008481095,0.0000060786483,0.00011632749],"domain_scores_gemma":[0.99975884,0.000040315786,0.00006151617,0.000106168096,0.000027645965,0.000005490984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000120863115,0.000058962578,0.0001258864,0.00007753802,0.000028346867,0.0000033176598,0.000050860563,0.000098309516,0.00016591062],"category_scores_gemma":[0.000018797464,0.000038802867,0.000036952024,0.00006414195,0.000025663196,0.00013360709,0.000017233071,0.00003988723,0.000117130694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006818729,0.000024133304,0.0006645016,0.000008541217,0.0000073951464,1.4637308e-7,0.00010447132,0.0000025525578,0.98197424,0.000118700635,0.00028228862,0.01674482],"study_design_scores_gemma":[0.0011425536,0.000045871,0.0013410222,0.00005226985,0.0000070868855,0.000014274433,0.000036382746,0.0000067863093,0.98272204,0.00016519235,0.014398438,0.00006807018],"about_ca_topic_score_codex":0.00011129231,"about_ca_topic_score_gemma":0.000044336302,"teacher_disagreement_score":0.01667675,"about_ca_system_score_codex":0.000015654841,"about_ca_system_score_gemma":0.0000082128845,"threshold_uncertainty_score":0.1816605},"labels":[],"label_agreement":null},{"id":"W2474695156","doi":"10.1385/1-59259-321-6:51","title":"General Methods for Culturing Haemophilus influenzae","year":2003,"lang":"en","type":"review","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Nicotinamide adenine dinucleotide; Haemophilus influenzae; NAD+ kinase; Hemin; Microbiology; Chocolate agar; Agar; Chemistry; Agar plate; Biochemistry; Biology; Bacteria; Genetics; Enzyme; Heme; Antibiotics","score_opus":0.1862032965478129,"score_gpt":0.42555334053208843,"score_spread":0.23935004398427553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474695156","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000005564979,0.9847625,0.0004773385,7.755228e-7,0.002677438,0.0011839687,0.0000742596,0.000117827716,0.010700341],"genre_scores_gemma":[2.7944785e-7,0.95906043,0.0022568598,0.00003001909,0.0003514755,0.000894765,0.00021627142,0.00007838231,0.037111517],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99792516,0.00054108346,0.00061705156,0.00047952658,0.000008871736,0.00042829898],"domain_scores_gemma":[0.9989177,0.00015111131,0.0003327907,0.00049125124,0.00008023126,0.000026937123],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030536155,0.00048111167,0.0014262922,0.00013671606,0.00036685265,0.00006625013,0.00030348302,0.00077077723,0.00012929851],"category_scores_gemma":[0.00003716869,0.00037312089,0.000621501,0.000019858066,0.00007705906,0.00004144776,0.00012183103,0.00040089534,0.000043398693],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000074061377,0.000020646874,1.6290498e-8,0.0026189494,0.00056709565,3.8587828e-7,0.000043978187,2.1172171e-7,0.00017110104,0.009436021,0.0029597494,0.98417443],"study_design_scores_gemma":[0.00042197466,0.000054781915,1.9244817e-7,0.00085804734,0.0009584299,0.000092578106,0.0000014984862,1.7608247e-7,0.0006594434,0.0001510918,0.99638546,0.0004163164],"about_ca_topic_score_codex":0.00009905524,"about_ca_topic_score_gemma":0.000009905329,"teacher_disagreement_score":0.9934257,"about_ca_system_score_codex":0.000049891958,"about_ca_system_score_gemma":0.00005975416,"threshold_uncertainty_score":0.9998721},"labels":[],"label_agreement":null},{"id":"W2477902403","doi":"10.1016/j.cmi.2016.07.026","title":"Impact of an evidence-based guideline on the management of community-acquired bacterial meningitis: a prospective cohort study","year":2016,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Guideline; Medicine; Odds ratio; Prospective cohort study; Confidence interval; Cohort; Cohort study; Internal medicine; Pediatrics; Pathology","score_opus":0.06022943569241758,"score_gpt":0.37218582859132754,"score_spread":0.31195639289891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2477902403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978227,0.000044891513,0.00008996081,0.00011552637,0.00087966595,0.000892791,0.000057916237,0.00003557946,0.000060961982],"genre_scores_gemma":[0.9995975,0.00012279727,0.0000172393,0.000030859643,0.000059072216,0.00006302313,0.00005202256,0.00000973953,0.00004774505],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9967449,0.0020158757,0.00081391894,0.00024261362,0.0000089944615,0.00017374338],"domain_scores_gemma":[0.99797404,0.0009749028,0.0003966593,0.00044858025,0.00018572168,0.000020082683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020834592,0.0001793476,0.0004673338,0.00008389958,0.00024268328,0.0000073077344,0.00013870682,0.00026885478,0.0006729179],"category_scores_gemma":[0.00025198096,0.00009190635,0.00017549624,0.0001237637,0.0005404227,0.00012521424,0.00009916757,0.00020356674,0.00002137383],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017334216,0.0015491593,0.47336286,0.000009622779,0.0008594547,1.9761053e-7,0.000048642407,0.0000013971518,0.5155537,0.00011662609,0.00031095798,0.0064539206],"study_design_scores_gemma":[0.0028472242,0.011358436,0.95614105,0.00015652724,0.00019530149,0.000017471124,0.00005338276,5.790351e-7,0.028634513,0.00008623274,0.000394742,0.000114509174],"about_ca_topic_score_codex":0.00048409484,"about_ca_topic_score_gemma":0.00006749564,"teacher_disagreement_score":0.48691922,"about_ca_system_score_codex":0.000038035676,"about_ca_system_score_gemma":0.000035768542,"threshold_uncertainty_score":0.73679787},"labels":[],"label_agreement":null},{"id":"W2486595130","doi":"","title":"Meningococcal C vaccines: the Canadian experience.","year":2004,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Institut national de psychiatrie légale Philippe-Pinel","funders":"","keywords":"Medicine; Vaccination; Neisseria meningitidis; Outbreak; Immunization; Meningococcal disease; Meningococcal vaccine; Incidence (geometry); Glycoconjugate; Disease; Environmental health; Pediatrics; Immunology; Virology; Internal medicine; Biology; Antigen","score_opus":0.02043995656657765,"score_gpt":0.22202238216761125,"score_spread":0.2015824256010336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2486595130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897197,0.00025379044,0.00000845398,0.002805784,0.001588916,0.00032914904,0.0000056686545,0.000049975242,0.005238588],"genre_scores_gemma":[0.99750507,0.000008206521,0.000004004356,0.0002460578,0.00009548562,0.0009175694,0.00001055243,0.0000062121885,0.0012068407],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9993971,0.00002811871,0.000105430896,0.000119479795,0.0000062683466,0.00034358067],"domain_scores_gemma":[0.9997259,0.000017110928,0.00002439165,0.00016732706,0.000028349728,0.000036962745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010430707,0.00007640872,0.00007917673,0.00005275318,0.0004527413,0.000035308487,0.00014166954,0.00009968296,0.0003314354],"category_scores_gemma":[0.000044322485,0.000047939175,0.000037990696,0.00011990809,0.000050982937,0.00006356369,0.000022082426,0.000118272525,0.00020068897],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041205005,0.00065604056,0.15963928,0.000027514305,0.0011721397,0.000024095785,0.017894749,0.00016296399,0.12678073,0.11589779,0.05719645,0.5201362],"study_design_scores_gemma":[0.0006609153,0.000012492344,0.5171141,0.0000015483353,0.000010897501,0.00007369861,0.00018367056,5.633705e-8,0.011589942,0.00034168563,0.4699086,0.00010240848],"about_ca_topic_score_codex":0.13424015,"about_ca_topic_score_gemma":0.24235058,"teacher_disagreement_score":0.5200338,"about_ca_system_score_codex":0.00008236725,"about_ca_system_score_gemma":0.000060830866,"threshold_uncertainty_score":0.871525},"labels":[],"label_agreement":null},{"id":"W2486600520","doi":"10.1136/sextrans-2011-050108.39","title":"P1-S1.39 Azithromycin susceptibilities in Canadian<i>Neisseria gonorrhoeae</i>isolates (2006–2010)","year":2011,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; Ste. Anne's Hospital; BC Centre for Disease Control; Toronto Public Health; Public Health Agency of Canada","funders":"","keywords":"Neisseria gonorrhoeae; Azithromycin; Medicine; Microbiology; Gonorrhea; Neisseria; Urethritis; Neisseriaceae; Virology; Gonococcal infection; Antibiotics; Sexually transmitted disease; Bacteria; Syphilis; Internal medicine; Biology; Genetics; Human immunodeficiency virus (HIV)","score_opus":0.017583457739490185,"score_gpt":0.22893937170510317,"score_spread":0.21135591396561298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2486600520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843849,0.00046294293,0.00014488983,0.00020572978,0.0036898614,0.00045897358,0.00018189878,0.0002922913,0.010178531],"genre_scores_gemma":[0.9962803,0.00013840548,0.00007551138,0.00013668001,0.00008488753,0.00012651017,0.00025338697,0.000048715214,0.0028555838],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997774,0.00022086619,0.00056304876,0.00049209717,0.000008596168,0.0009413828],"domain_scores_gemma":[0.9990922,0.000111728456,0.00008102239,0.0004562144,0.00013194498,0.00012689143],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024416228,0.00036705227,0.0004106735,0.0007627512,0.00050748605,0.000044950124,0.0002170419,0.0005061205,0.013040951],"category_scores_gemma":[0.00006163148,0.00036274866,0.00013598303,0.00076428254,0.00020547974,0.00038798002,0.00002301133,0.00059178186,0.0014771876],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021089392,0.0017527338,0.5599544,0.000086161264,0.0006342769,0.0000036494853,0.008357662,0.000030086601,0.4096694,0.006296858,0.008105527,0.004898354],"study_design_scores_gemma":[0.0032583307,0.001614695,0.66006523,0.00008896229,0.0001905796,0.0003521179,0.001891477,0.000016758991,0.015244851,0.0016872296,0.3143338,0.0012559318],"about_ca_topic_score_codex":0.57943165,"about_ca_topic_score_gemma":0.8121964,"teacher_disagreement_score":0.39442456,"about_ca_system_score_codex":0.00016872931,"about_ca_system_score_gemma":0.00043638633,"threshold_uncertainty_score":0.99988246},"labels":[],"label_agreement":null},{"id":"W2489218931","doi":"10.1017/cbo9781316146187.017","title":"Central nervous system infections","year":2015,"lang":"en","type":"book-chapter","venue":"Cambridge University Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; History","score_opus":0.02496724287904204,"score_gpt":0.19993249699305235,"score_spread":0.17496525411401032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2489218931","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013522869,0.00039271632,0.00012943798,0.0000082946835,0.0030932731,0.00032836263,0.00055387034,0.00039700625,0.99374473],"genre_scores_gemma":[0.024377909,0.000039072034,0.0000044545645,0.0000065097047,0.00020249309,0.0000011094556,0.0002689708,0.000038370807,0.9750611],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990119,0.000066872024,0.00019176073,0.00036896294,0.000023152841,0.00033740405],"domain_scores_gemma":[0.99904704,0.00003318779,0.00018893598,0.00042720494,0.00022642424,0.0000772188],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006504106,0.00033337035,0.00042626797,0.00018424598,0.00032329297,0.000027493874,0.00024009799,0.0007514157,0.000040972194],"category_scores_gemma":[0.0000063720895,0.0003647127,0.0002234034,0.000008667367,0.00015706151,0.00006807141,0.00023013163,0.0005100189,0.000188846],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008521565,0.00002018693,0.000007229859,0.00006221113,0.0004006714,0.000032320473,0.000023555833,0.0000035488547,0.0013845927,0.8381955,0.15899396,0.0007909828],"study_design_scores_gemma":[0.00074555416,0.00010947294,0.000052920586,0.00011154757,0.00034810547,0.00023029119,0.000039767332,0.0000017184715,0.00038269264,0.000001998565,0.9976212,0.00035474516],"about_ca_topic_score_codex":0.0007262974,"about_ca_topic_score_gemma":0.00001530485,"teacher_disagreement_score":0.8386272,"about_ca_system_score_codex":0.00035193312,"about_ca_system_score_gemma":0.0001467481,"threshold_uncertainty_score":0.9998805},"labels":[],"label_agreement":null},{"id":"W2492762296","doi":"10.1016/j.jinf.2016.08.003","title":"Risk scores for outcome in bacterial meningitis: Systematic review and external validation study","year":2016,"lang":"en","type":"review","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"European Research Council; Academisch Medisch Centrum; ZonMw","keywords":"Medicine; Meningitis; Receiver operating characteristic; Bacterial meningitis; Internal medicine; Cohort study; Meningococcal disease; Area under the curve; Prospective cohort study; Pediatrics; Neisseria meningitidis","score_opus":0.04025343578274548,"score_gpt":0.35390254485248723,"score_spread":0.31364910906974175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2492762296","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014857686,0.97972906,0.0002634701,0.0000067593824,0.0027840638,0.0023057386,0.00003808231,0.0000111788095,0.000003962745],"genre_scores_gemma":[0.0019480948,0.9974785,0.000011734518,0.0000030603705,0.000261433,0.00017582145,0.000013951521,0.000022704387,0.000084724066],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99679613,0.000984542,0.0018756242,0.00016992955,0.000023575438,0.00015021209],"domain_scores_gemma":[0.9965931,0.00037251305,0.0026780341,0.00015086414,0.00018651903,0.000018938144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018213914,0.00026397273,0.0023671407,0.000429062,0.00009934128,0.00004933461,0.0000835402,0.00025152156,0.00012315265],"category_scores_gemma":[0.0008583653,0.00015587865,0.00040227413,0.00012741028,0.000018915285,0.00024754112,0.000033184904,0.00032408387,0.00002629273],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012293081,0.00059880415,0.0071272072,0.8652729,0.0022538933,0.000004398339,0.00008186393,2.2146776e-7,0.00042869433,0.000037916892,0.00034773257,0.12372344],"study_design_scores_gemma":[0.0036858271,0.0024807614,0.0028372044,0.88343394,0.019601103,0.0029856176,0.000013130623,7.327389e-8,0.000044877313,0.00007391373,0.08428017,0.0005633946],"about_ca_topic_score_codex":0.00004814928,"about_ca_topic_score_gemma":0.000021237138,"teacher_disagreement_score":0.12316005,"about_ca_system_score_codex":0.0001247905,"about_ca_system_score_gemma":0.000060992934,"threshold_uncertainty_score":0.6356546},"labels":[],"label_agreement":null},{"id":"W2507674420","doi":"10.3109/9781420060744-46","title":"Meningococcal Conjugate and Protein-Based Vaccines","year":2016,"lang":"en","type":"book-chapter","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Conjugate; Virology; Meningococcal vaccine; Medicine; Immunology; Immunization; Antigen; Mathematics","score_opus":0.01324174944181311,"score_gpt":0.22059236286728956,"score_spread":0.20735061342547645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507674420","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01798399,0.0015625295,0.00016012948,0.0011875457,0.0012568628,0.0008865548,0.00014059669,0.00031910412,0.9765027],"genre_scores_gemma":[0.038501177,0.00005157115,0.000037343456,0.00008902797,0.00015322433,0.000034542558,0.000058916732,0.0000419543,0.9610323],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991927,0.000021447462,0.0002517752,0.00032584203,0.000007971053,0.00020026292],"domain_scores_gemma":[0.99947757,0.0000615061,0.00012423997,0.00023252593,0.000081093756,0.000023092925],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007298158,0.0003001364,0.00037260723,0.00011493752,0.00013538881,0.000021129285,0.000080337406,0.00059712795,0.01344827],"category_scores_gemma":[0.000012164448,0.00019464068,0.00008908093,0.000008198021,0.00009312426,0.000040826846,0.00006194524,0.0001998446,0.0011488824],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002590796,0.000027504078,0.000089146815,0.000057379875,0.00037342837,0.000002678225,0.000010434668,4.1242796e-8,0.6237118,0.3518976,0.009945618,0.013625285],"study_design_scores_gemma":[0.0013204628,0.00021311078,0.00007395362,0.00016196226,0.000060720788,0.00003597654,0.0000011296291,2.1826203e-7,0.02339693,0.0034213662,0.9709777,0.00033642695],"about_ca_topic_score_codex":0.000024814877,"about_ca_topic_score_gemma":0.00003194162,"teacher_disagreement_score":0.96103215,"about_ca_system_score_codex":0.000015582184,"about_ca_system_score_gemma":0.00004673994,"threshold_uncertainty_score":0.99962884},"labels":[],"label_agreement":null},{"id":"W2508622627","doi":"10.7717/peerj.2337","title":"Evaluation of outbreak response immunization in the control of pertussis using agent-based modeling","year":2016,"lang":"en","type":"article","venue":"PeerJ","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"","keywords":"Outbreak; Immunization; Vaccination; Medicine; Herd immunity; Transmission (telecommunications); Cumulative incidence; Environmental health; Immunology; Virology; Cohort; Antibody; Internal medicine; Computer science","score_opus":0.06071085461645147,"score_gpt":0.30909507997392327,"score_spread":0.2483842253574718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508622627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842178,0.0002713378,0.014745536,0.0004055222,0.00016279268,0.00015139782,0.000018421719,0.0000055541122,0.000021635647],"genre_scores_gemma":[0.9999056,0.0000051122242,0.000026063222,0.000016500117,0.000008291234,0.000009041222,0.000007639726,0.000004032644,0.000017729024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987114,0.00090767513,0.0002099402,0.000067854715,0.000029925315,0.000073182055],"domain_scores_gemma":[0.9992319,0.00021676354,0.00009285608,0.00015751622,0.0002984996,0.0000025089175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021256027,0.00004876604,0.0001155051,0.000095801945,0.000041977633,0.0000025955435,0.00006673064,0.000068603644,0.00019327912],"category_scores_gemma":[0.00051766424,0.000027311202,0.000040266837,0.00009610213,0.000028208875,0.00004714166,0.000007896024,0.00003187096,0.000003878517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043291878,0.00006203691,0.00260383,0.0000030517128,0.000025312816,2.2093506e-8,0.00021772462,0.0042027854,0.98781943,0.000046750578,0.000007173717,0.00457899],"study_design_scores_gemma":[0.021360256,0.00054956827,0.16648097,0.00038852787,0.00091463333,0.000022628308,0.0011285059,0.28619814,0.5210443,0.0005950625,0.00095867785,0.0003587055],"about_ca_topic_score_codex":0.00038221278,"about_ca_topic_score_gemma":0.000037399324,"teacher_disagreement_score":0.4667751,"about_ca_system_score_codex":0.00003257161,"about_ca_system_score_gemma":0.00007857508,"threshold_uncertainty_score":0.21162708},"labels":[],"label_agreement":null},{"id":"W2512028827","doi":"10.1099/jmmcr.0.005064","title":"Haemophilus influenzae type a as a cause of paediatric septic arthritis","year":2016,"lang":"en","type":"article","venue":"JMM Case Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University","funders":"","keywords":"Septic arthritis; Haemophilus influenzae; Medicine; Microbiology; Arthritis; Intensive care medicine; Immunology; Antibiotics; Biology","score_opus":0.015416768177879561,"score_gpt":0.26139925511231754,"score_spread":0.24598248693443797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512028827","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99546176,0.0020457814,0.0000058451838,0.00009930573,0.0015611441,0.00015099689,0.000014781189,0.000063547166,0.00059683726],"genre_scores_gemma":[0.99786353,0.00027424627,0.000012484481,0.00003201107,0.00009349795,0.000014334479,0.000008849,0.00001406174,0.0016870081],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99908954,0.00006064202,0.00042064307,0.0002165228,0.000014225512,0.00019843916],"domain_scores_gemma":[0.99914294,0.0000785128,0.0002442007,0.00035851682,0.0001477276,0.000028076935],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015107563,0.00011999851,0.00024563036,0.000121714475,0.00008053191,0.0000067908422,0.00002274702,0.00018193507,0.0015472142],"category_scores_gemma":[0.0002676623,0.00008202769,0.00008661301,0.00018454029,0.00006545825,0.000090933296,0.00005090316,0.00007489687,0.00030878957],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014988286,0.00025668927,0.02949454,0.000037174992,0.00036514687,0.032538358,0.00019386671,0.0000010355918,0.8946679,0.00031589862,0.009561012,0.032418445],"study_design_scores_gemma":[0.001554601,0.0006804633,0.011024373,0.000108749584,0.00015880149,0.72150856,0.000046000074,1.4077168e-7,0.09017806,0.00071365014,0.17366187,0.000364729],"about_ca_topic_score_codex":0.00053614395,"about_ca_topic_score_gemma":0.00012165688,"teacher_disagreement_score":0.8044899,"about_ca_system_score_codex":0.000022337976,"about_ca_system_score_gemma":0.0000949452,"threshold_uncertainty_score":0.9993655},"labels":[],"label_agreement":null},{"id":"W2513033040","doi":"10.1139/bcb-2016-0055","title":"A comparative, cross-species investigation of the properties and roles of transferrin- and lactoferrin-binding protein B from pathogenic bacteria","year":2016,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Lactoferrin; Transferrin; Biology; Biochemistry; Iron-binding proteins; Transferrin receptor; Receptor; Microbiology","score_opus":0.027482909436072376,"score_gpt":0.2219391414735366,"score_spread":0.19445623203746423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2513033040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997302,0.0021759104,0.0000026623356,0.00007170827,0.000068688765,0.000120418124,0.00017880823,0.0000073616893,0.000072433795],"genre_scores_gemma":[0.999114,0.00020223623,0.000013204843,0.0000034100226,0.000016425494,0.0000120535915,0.000017629141,0.0000031379436,0.00061792723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945337,0.00008162339,0.00018914622,0.0001749612,0.0000057868083,0.00009511496],"domain_scores_gemma":[0.9997109,0.000043192013,0.0000950639,0.00010287594,0.000034789846,0.00001315645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059415015,0.000104586456,0.0002063747,0.000015267038,0.00008557678,0.0000068190043,0.000057521258,0.000185488,0.000074943746],"category_scores_gemma":[0.000013537016,0.000055576973,0.000026172986,0.000028484226,0.0007359108,0.000033171644,0.00005864095,0.00005391962,7.8476364e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011296841,0.000014969313,0.049166173,0.00004770096,0.000034175733,2.2026555e-8,0.00023234171,6.7105845e-9,0.9499803,0.000056240595,0.0000039681154,0.00035110212],"study_design_scores_gemma":[0.000588259,0.00007720391,0.061816536,0.000077499164,0.000016677048,0.0000044933936,0.00012010329,1.3743453e-7,0.9366038,0.00006889186,0.00055436324,0.00007202837],"about_ca_topic_score_codex":0.000041868014,"about_ca_topic_score_gemma":0.000015159654,"teacher_disagreement_score":0.013376524,"about_ca_system_score_codex":0.0000040025866,"about_ca_system_score_gemma":0.0000210026,"threshold_uncertainty_score":0.2711494},"labels":[],"label_agreement":null},{"id":"W2515394952","doi":"","title":"Alternatives to HIST for acellular pertussis vaccines: progress and challenges in replacement.","year":2016,"lang":"en","type":"other","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Context (archaeology); European union; Czech; Political science; Medicine; Business; Geography","score_opus":0.0440256626115789,"score_gpt":0.26199257011550836,"score_spread":0.21796690750392947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515394952","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060103238,0.5791142,0.0001761449,0.03759764,0.022617059,0.023946222,0.0012785129,0.0011117891,0.27405518],"genre_scores_gemma":[0.010327373,0.0146855265,0.0000719178,0.000050261282,0.00063877105,0.011271798,0.00007168318,0.00023447142,0.9626482],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99902505,0.000062290914,0.0001760032,0.0003981226,0.000009035545,0.00032950178],"domain_scores_gemma":[0.99956805,0.00005347636,0.00011101853,0.00021754201,0.000021892274,0.000028033599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001635462,0.00020833593,0.0003336699,0.00029105635,0.000038241444,0.000014430611,0.000114288654,0.0002738628,0.00065893144],"category_scores_gemma":[0.000049022983,0.00014864917,0.000045244316,0.000035877194,0.000036953636,0.000030211637,0.000073989955,0.00006702749,0.000048650592],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047972845,0.00019403602,0.003059019,0.00032108685,0.00049417507,0.0000011536353,0.00021782819,1.1311065e-8,0.0011997151,0.0008152454,0.2938008,0.69941723],"study_design_scores_gemma":[0.0013521075,0.000064447646,0.009433332,0.00008131001,0.000025929405,0.0000068314907,0.00004030575,3.0031448e-8,0.00060876634,0.000022468914,0.9881654,0.0001990759],"about_ca_topic_score_codex":0.00006242283,"about_ca_topic_score_gemma":0.00035526708,"teacher_disagreement_score":0.69921815,"about_ca_system_score_codex":0.00003547795,"about_ca_system_score_gemma":0.000008789988,"threshold_uncertainty_score":0.7214837},"labels":[],"label_agreement":null},{"id":"W2525272132","doi":"10.1503/cmaj.160193","title":"Effectiveness of pertussis vaccination and duration of immunity","year":2016,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Schwartz/Reisman Emergency Medicine Institute; Institute for Clinical Evaluative Sciences; Public Health Ontario; Provincial Laboratory of Public Health; University Health Network","funders":"Canadian Institutes of Health Research; Ontario Ministry of Health and Long-Term Care; Institute for Clinical Evaluative Sciences","keywords":"Medicine; Vaccination; Odds ratio; Confidence interval; Immunity; Pertussis vaccine; Immunology; Priming (agriculture); Odds; Logistic regression; Vaccine efficacy; Pediatrics; Internal medicine; Immune system; Immunization; Biology","score_opus":0.004917516245085971,"score_gpt":0.22107724934168504,"score_spread":0.21615973309659908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2525272132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973055,0.00018876304,0.000168719,0.0014712012,0.00056654314,0.00004714357,0.000020600353,0.0000035100882,0.00022799218],"genre_scores_gemma":[0.99963444,0.0001860531,0.000006044799,0.00002391311,0.000047915193,0.0000017623771,0.0000051040506,0.0000029840983,0.00009180426],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99912435,0.00041342323,0.00025854076,0.00005097792,0.00004103619,0.00011169074],"domain_scores_gemma":[0.9989562,0.00038837924,0.00021033874,0.0000432972,0.00033283682,0.0000689729],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013521388,0.00004608873,0.00014233863,0.00012101202,0.00010622993,0.0000055834494,0.000051866275,0.00024080253,0.0021461344],"category_scores_gemma":[0.0014584678,0.000030872445,0.000036449324,0.000078504534,0.000022856184,0.00010204856,0.0000079301735,0.00013783142,0.000010737169],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007690637,0.00005891038,0.28231612,0.000043301774,0.00026949428,0.0000013430804,0.00016816064,1.6074384e-7,0.5804582,0.0016494003,0.0020676241,0.13289034],"study_design_scores_gemma":[0.001316526,0.0001015427,0.9545899,0.000118315846,0.000020942947,0.000097863194,0.000057396726,0.0000010752767,0.03457195,0.00024289485,0.008828608,0.000052981144],"about_ca_topic_score_codex":0.0019115316,"about_ca_topic_score_gemma":0.0025543417,"teacher_disagreement_score":0.6722738,"about_ca_system_score_codex":0.00014642927,"about_ca_system_score_gemma":0.00034118124,"threshold_uncertainty_score":0.99876606},"labels":[],"label_agreement":null},{"id":"W2526476064","doi":"10.1503/cmaj.161048","title":"Reining in the “100-day cough”: unfinished business","year":2016,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Children's Hospital of Eastern Ontario; Kingston Health Sciences Centre; University of Ottawa","funders":"","keywords":"Pertussis vaccine; Whooping cough; Medicine; Vaccination; Adverse effect; Event (particle physics); Pediatrics; Immunology; Immunization; Internal medicine","score_opus":0.009067938837132134,"score_gpt":0.2268030699064875,"score_spread":0.21773513106935535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2526476064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8863942,0.00026596888,0.00013723984,0.10298962,0.0047010407,0.00008985682,0.000022693848,0.000017596283,0.0053817723],"genre_scores_gemma":[0.9955107,0.00013622279,0.0000038638027,0.002448472,0.0006644105,0.0000056623503,0.00000650415,0.0000061680757,0.0012179699],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987635,0.00045239387,0.000284105,0.000089960886,0.00006954222,0.0003405096],"domain_scores_gemma":[0.999077,0.0004206769,0.00012201642,0.00007995255,0.00020089254,0.00009941749],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0022192989,0.00007402366,0.0001325055,0.0001268855,0.0002729675,0.000044472807,0.00020412043,0.00035476856,0.0075524305],"category_scores_gemma":[0.002414456,0.000039941962,0.000041218802,0.00025802266,0.000034169698,0.00010522105,0.00000905992,0.00045658086,0.0004534329],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033253807,0.00010608901,0.24046166,0.0000051840825,0.0002532783,0.00021311695,0.0015309749,0.0000012818832,0.014135347,0.003958457,0.5318412,0.20746012],"study_design_scores_gemma":[0.00088615366,0.000019186118,0.27362803,0.000048922102,0.0000072670337,0.00044135202,0.0001394565,4.6272442e-7,0.00006399887,0.00013265025,0.7245651,0.00006743361],"about_ca_topic_score_codex":0.0033041826,"about_ca_topic_score_gemma":0.02927412,"teacher_disagreement_score":0.2073927,"about_ca_system_score_codex":0.0002725342,"about_ca_system_score_gemma":0.00078487437,"threshold_uncertainty_score":0.9933548},"labels":[],"label_agreement":null},{"id":"W2528706897","doi":"10.1038/ncomms13015","title":"Structure of the Neisseria meningitidis Type IV pilus","year":2016,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":148,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of Biomedical Imaging and Bioengineering; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Lawrence Berkeley National Laboratory; Centre National de la Recherche Scientifique; Institut National de la Santé et de la Recherche Médicale; National Cancer Institute; National Institutes of Health; Agence Nationale de la Recherche","keywords":"Neisseria meningitidis; Pilus; Microbiology; Neisseria; Bacterial protein; Biology; Computational biology; Genetics; Bacteria; Escherichia coli; Gene","score_opus":0.013761421378844922,"score_gpt":0.2744820657656952,"score_spread":0.26072064438685033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528706897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877133,0.0042697364,0.0000065084937,0.00481062,0.0014815388,0.00012714737,0.000103421015,0.000038631537,0.0014490942],"genre_scores_gemma":[0.99875003,0.00018782477,0.00011112407,0.000055517863,0.00002048902,0.0000030362844,0.000023686893,0.0000070341785,0.0008412822],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995571,0.00013196224,0.00013403143,0.00007802608,0.000007001215,0.00009187638],"domain_scores_gemma":[0.9984036,0.00014806508,0.00009295383,0.0012064374,0.00014237176,0.0000065842883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004192971,0.000069733265,0.000098846875,0.000031005155,0.00023558394,0.0000050309704,0.0006506138,0.00026708425,0.0004568339],"category_scores_gemma":[0.0001560773,0.000034984554,0.00005121232,0.0001977164,0.00014431162,0.000050482307,0.0002449394,0.0003099307,0.000034107943],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013032847,0.000025331216,0.005633637,0.0000013513106,0.000045226545,4.09215e-9,0.000050846156,9.3575224e-8,0.96797377,0.020787466,0.0045435326,0.00092569855],"study_design_scores_gemma":[0.0006091003,0.00005423734,0.1521176,0.000051668274,0.000056613357,0.000030108118,0.00003982312,5.4638366e-7,0.26615292,0.0014078689,0.57935256,0.00012698538],"about_ca_topic_score_codex":0.00003245862,"about_ca_topic_score_gemma":0.00036069384,"teacher_disagreement_score":0.70182085,"about_ca_system_score_codex":0.000014932881,"about_ca_system_score_gemma":0.00003236766,"threshold_uncertainty_score":0.5002011},"labels":[],"label_agreement":null},{"id":"W2532452621","doi":"10.1371/journal.pone.0165099","title":"Comparative Analysis of Membrane Vesicles from Three Piscirickettsia salmonis Isolates Reveals Differences in Vesicle Characteristics","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Seventh Framework Programme; FP7 People: Marie-Curie Actions; Norges Forskningsråd; Universitetet i Oslo; Macquarie University","keywords":"Virulence; Biology; Microbiology; Proteome; Immune system; Bacteria; Biofilm; Bacterial outer membrane; Gene; Escherichia coli; Biochemistry; Genetics","score_opus":0.06146230339754049,"score_gpt":0.25153189396195447,"score_spread":0.19006959056441397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2532452621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99869186,0.0003460017,0.000032467255,0.00025886451,0.0000837295,0.00012671779,0.0003530332,0.000030173827,0.00007715079],"genre_scores_gemma":[0.99946636,0.00015716744,0.000080535436,0.000012157812,0.000036768626,0.000017060913,0.00006984676,0.000006042866,0.0001540817],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99902785,0.000130207,0.00040252417,0.00022890004,0.000020875133,0.00018966192],"domain_scores_gemma":[0.9990375,0.00041324785,0.00020667409,0.00023638595,0.00008954074,0.000016650156],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009598896,0.00013837326,0.0007973114,0.00022164831,0.00006002203,0.000011681297,0.00014562822,0.00012760589,0.001268372],"category_scores_gemma":[0.000060101076,0.000093259085,0.00008036687,0.00037872445,0.00011855179,0.00010448722,0.000048230406,0.000083328414,0.000097367505],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008442737,0.00040747554,0.380923,0.000006224369,0.001604984,1.8663413e-7,0.00020475208,5.7918683e-8,0.61640525,0.00005528523,0.000011288582,0.00029705314],"study_design_scores_gemma":[0.0003793694,0.00008321409,0.67028683,0.00009244578,0.0005523804,1.666838e-7,0.00003057437,0.000012523005,0.32830036,0.00015636877,0.000013050242,0.000092718314],"about_ca_topic_score_codex":0.0003958681,"about_ca_topic_score_gemma":0.00057661015,"teacher_disagreement_score":0.28936383,"about_ca_system_score_codex":0.000019410429,"about_ca_system_score_gemma":0.000013776244,"threshold_uncertainty_score":0.9996446},"labels":[],"label_agreement":null},{"id":"W2538586943","doi":"10.1016/j.vaccine.2016.10.029","title":"Pertussis: Biology, epidemiology and prevention","year":2016,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Nova Scotia Health Authority; Izaak Walton Killam Health Centre","funders":"National Institutes of Health","keywords":"Epidemiology; Bordetella pertussis; Virology; MEDLINE; Medicine; Biology; Pathology; Genetics; Bacteria","score_opus":0.02871744048809037,"score_gpt":0.2989096021972776,"score_spread":0.2701921617091872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2538586943","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884563,0.0032495111,0.0016088249,0.0052684625,0.00088322465,0.000113221904,0.000015842015,0.00009549282,0.00030909074],"genre_scores_gemma":[0.9945995,0.0007903635,0.0001509374,0.00011963872,0.00009821423,0.000012605088,0.000022826573,0.000008038091,0.0041978504],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990992,0.00021880421,0.00022717971,0.00022513182,0.000001964445,0.00022771447],"domain_scores_gemma":[0.9994463,0.0002668254,0.0000760913,0.0001616944,0.000030471148,0.000018672548],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000297626,0.000104199324,0.00023258966,0.000074843774,0.00010191654,0.000002328573,0.00005803175,0.00019335344,0.001727517],"category_scores_gemma":[0.0002743007,0.00005671125,0.000045763787,0.00005314631,0.000024690866,0.0000709747,0.000057563433,0.000060763556,0.0003496363],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008066342,0.000042718057,0.10406379,0.000004214068,0.00008351335,1.0964104e-7,0.000012651318,2.0665727e-8,0.7602689,0.008257123,0.0060067098,0.12117955],"study_design_scores_gemma":[0.0032383597,0.0006200982,0.3791189,0.000053770582,0.000056395955,0.0001658558,0.00001841611,5.716109e-7,0.025204549,0.0145352,0.5767612,0.00022668837],"about_ca_topic_score_codex":0.00006701267,"about_ca_topic_score_gemma":0.000029460147,"teacher_disagreement_score":0.7350644,"about_ca_system_score_codex":0.000010614225,"about_ca_system_score_gemma":0.000010214157,"threshold_uncertainty_score":0.999185},"labels":[],"label_agreement":null},{"id":"W2539258706","doi":"10.1016/j.cmi.2016.10.007","title":"Low and disparate seroprotection after pentavalent childhood vaccination in the Lao People's Democratic Republic: a cross-sectional study","year":2016,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Francophone University Association","funders":"","keywords":"Medicine; Diphtheria; Vaccination; HBsAg; Tetanus; Pediatrics; Hepatitis B; Immunology; Hepatitis B vaccine; Hepatitis B virus; Virology; Virus","score_opus":0.019064187150175233,"score_gpt":0.31194917744834866,"score_spread":0.29288499029817344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2539258706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967545,0.00016471074,0.00015022865,0.00036996044,0.001684141,0.0007769781,0.00001752773,0.00005052954,0.000031380547],"genre_scores_gemma":[0.99893254,0.00029108502,0.0000043972573,0.00013513604,0.00015581475,0.00019960616,0.00003389857,0.00001011554,0.00023739386],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974553,0.0010842767,0.00067323004,0.0005223234,0.0000110160545,0.00025387475],"domain_scores_gemma":[0.9990484,0.00043349867,0.00019133306,0.00021371804,0.000090270114,0.00002273912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015051202,0.00019783997,0.0002892256,0.00014501953,0.00035098032,0.00006323743,0.000072087765,0.00044426371,0.00040366215],"category_scores_gemma":[0.0003115645,0.000113513204,0.000083574654,0.00018178264,0.00015946764,0.00030416108,0.00008566416,0.00039730783,0.00008423354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033518375,0.000863165,0.9659589,0.0000116734645,0.000073624244,5.3373964e-7,0.00014492321,4.5172402e-7,0.027514169,0.000038554554,0.00012737868,0.0049314457],"study_design_scores_gemma":[0.0030452292,0.0012091524,0.9933174,0.000022908353,0.00003479964,0.00037936014,0.000029701187,0.0000010761634,0.0006660286,0.00024528964,0.0008923515,0.00015670178],"about_ca_topic_score_codex":0.00020962172,"about_ca_topic_score_gemma":0.0019075986,"teacher_disagreement_score":0.027358504,"about_ca_system_score_codex":0.000036222165,"about_ca_system_score_gemma":0.000023178029,"threshold_uncertainty_score":0.46289343},"labels":[],"label_agreement":null},{"id":"W2546716211","doi":"10.1007/978-1-4939-6581-6_21","title":"Filamentous Bacteria as Targets to Study Phagocytosis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Phagosome; Phagocytosis; Bacteria; Microbiology; Cell biology; Biology; Chemistry; Genetics","score_opus":0.022462932042647567,"score_gpt":0.3843009126775896,"score_spread":0.36183798063494205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546716211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8370548,0.00027472022,0.15989044,0.00038396826,0.0015364118,0.00046146702,0.000016014917,0.000058657795,0.00032350997],"genre_scores_gemma":[0.89818454,0.000027815113,0.100096755,0.0004321985,0.000046038094,0.00024457762,0.000016763335,0.00002972644,0.00092158065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99672097,0.0020235619,0.00035188865,0.00047733274,0.000008496083,0.00041776485],"domain_scores_gemma":[0.99922025,0.00022063503,0.000070656424,0.00040574704,0.00004902324,0.000033675537],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008216293,0.00020820719,0.00038876737,0.00024058165,0.000074753,0.0000099392155,0.00024248553,0.00025573483,0.0028222199],"category_scores_gemma":[0.00047092536,0.00014025166,0.00007920292,0.0002276119,0.00006149649,0.000030981202,0.00020956062,0.00012105977,0.0005591781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011860579,0.00026336033,0.0050311508,0.0000012794515,0.00011953352,0.0000062296663,0.00013877943,1.9293105e-7,0.9251381,0.0005756051,0.00009130136,0.068515874],"study_design_scores_gemma":[0.0016055991,0.0011239637,0.011813123,0.000009576388,0.000025696443,0.000039065228,0.000066111665,7.252681e-8,0.9324733,0.0015582517,0.05106155,0.00022366918],"about_ca_topic_score_codex":0.00020863248,"about_ca_topic_score_gemma":0.000032349762,"teacher_disagreement_score":0.0682922,"about_ca_system_score_codex":0.00004725956,"about_ca_system_score_gemma":0.000023978851,"threshold_uncertainty_score":0.9980893},"labels":[],"label_agreement":null},{"id":"W2548989094","doi":"10.1093/ofid/ofw172.1049","title":"Preparedness for and Response to Meningococcal Outbreaks: Safety Results. of a Randomized Controlled Trial of Two Schedules of 4CMenB Vaccine in Adolescents and Young Adults","year":2016,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; University of Calgary; University of British Columbia; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; BC Children's Hospital; Dalhousie University","funders":"","keywords":"Medicine; Meningococcal vaccine; Randomized controlled trial; Preparedness; Outbreak; Meningococcal disease; Pediatrics; Internal medicine; Neisseria meningitidis; Virology; Immunization; Immunology","score_opus":0.006804324393687786,"score_gpt":0.2766180917114958,"score_spread":0.26981376731780804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548989094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917474,0.00037654207,0.00013854727,0.00014482971,0.00051018543,0.0064035063,0.0005824998,0.000015095082,0.00008139278],"genre_scores_gemma":[0.99891907,0.000113196635,0.000030161747,0.000010454156,0.000015634798,0.0007739363,0.000021002736,0.000013837277,0.00010269113],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9976829,0.00066767156,0.0011019583,0.0003040433,0.000024775001,0.00021865065],"domain_scores_gemma":[0.99795437,0.0009837778,0.00055546203,0.00023279346,0.00022827665,0.00004530523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011851781,0.0001900818,0.0016148938,0.0002336066,0.00007934064,0.000015564676,0.00013103028,0.000110884284,0.000023863906],"category_scores_gemma":[0.0031265006,0.000120919736,0.00019139813,0.0001183658,0.00012772442,0.00016012776,0.00021643477,0.000041337233,8.488558e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.91643804,0.00076005294,0.025234038,0.000060089795,0.0003295747,1.7502279e-7,0.00029296952,0.000001423442,0.054605242,0.0005200537,0.000056763212,0.0017015862],"study_design_scores_gemma":[0.9792987,0.0019028897,0.011651462,0.00075691985,0.00025990984,0.000006873151,0.0001886058,0.0000046117257,0.005277122,0.00040271907,0.00010108049,0.00014909673],"about_ca_topic_score_codex":0.0010874276,"about_ca_topic_score_gemma":0.0008488357,"teacher_disagreement_score":0.062860675,"about_ca_system_score_codex":0.00002875881,"about_ca_system_score_gemma":0.00009942197,"threshold_uncertainty_score":0.49309638},"labels":[],"label_agreement":null},{"id":"W2555725337","doi":"10.1080/14760584.2017.1258308","title":"The Global Meningococcal Initiative: global epidemiology, the impact of vaccines on meningococcal disease and the importance of herd protection","year":2016,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":267,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Sanofi Pasteur; National Institute for Health and Care Research; Sanofi","keywords":"Meningococcal vaccine; Neisseria meningitidis; Meningococcal disease; Vaccination; Outbreak; Epidemiology; Carriage; Herd immunity; Medicine; Incidence (geometry); Meningococcal meningitis; Reverse vaccinology; Environmental health; Immunization; Immunology; Virology; Biology; Immune system; Antibody","score_opus":0.051802325432709476,"score_gpt":0.40518518826800304,"score_spread":0.3533828628352936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555725337","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010827662,0.9924861,0.000027860595,0.0019663468,0.00073815725,0.0031152146,0.0003950632,0.000027680418,0.00016076902],"genre_scores_gemma":[0.0021452606,0.99647635,0.000010708012,0.00011268316,0.00033104423,0.0007999022,0.000056594912,0.000025827361,0.000041642576],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.993519,0.0032245503,0.0022421016,0.00051813765,0.000053646887,0.00044257185],"domain_scores_gemma":[0.9931519,0.0024713327,0.0028967992,0.0010709169,0.00035191857,0.000057128207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002337966,0.0007166384,0.0033456592,0.00004904668,0.00037165408,0.000012905075,0.0007579662,0.0003595568,0.00023152058],"category_scores_gemma":[0.0034668122,0.00023919117,0.0015484948,0.00050736975,0.0005532149,0.0000997899,0.00031042186,0.00036576958,0.00001442155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001771785,0.0002887829,0.003526517,0.016154945,0.0038761112,9.95121e-7,0.0000673721,4.9058286e-7,0.00008147192,0.010890629,0.017703393,0.9456375],"study_design_scores_gemma":[0.0019913581,0.0007186133,0.007234016,0.056001216,0.0012016596,0.00022713846,0.000033143508,0.0000014324748,0.000026207506,0.0014293742,0.930673,0.0004628458],"about_ca_topic_score_codex":0.0003470404,"about_ca_topic_score_gemma":0.000035307756,"teacher_disagreement_score":0.94517463,"about_ca_system_score_codex":0.00013738695,"about_ca_system_score_gemma":0.0003275797,"threshold_uncertainty_score":0.9753933},"labels":[],"label_agreement":null},{"id":"W2556829584","doi":"10.1038/ejhg.2016.160","title":"Reply to Kranendonk et al","year":2016,"lang":"fr","type":"letter","venue":"European Journal of Human Genetics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill Genome Centre","funders":"","keywords":"Biology; Computational biology; Genetics; Evolutionary biology","score_opus":0.026821623502208087,"score_gpt":0.2710093008789737,"score_spread":0.24418767737676558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2556829584","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27868545,0.007508226,0.0008008735,0.6839292,0.018299896,0.00027840288,0.00017489326,0.000032180036,0.010290898],"genre_scores_gemma":[0.039977096,0.004076798,0.0010697448,0.8693382,0.0154367,0.0000022709012,0.000099569064,0.0003525779,0.06964701],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99502724,0.0025733479,0.001390051,0.0003624995,0.0000609422,0.0005859135],"domain_scores_gemma":[0.99761784,0.000140007,0.0010575001,0.0005812767,0.00049323577,0.0001101317],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013668152,0.00047364348,0.00070805463,0.00038465692,0.00029974693,0.000102977654,0.0007548617,0.00019497237,0.0047644363],"category_scores_gemma":[0.00008348464,0.00036878313,0.00044271353,0.0000974588,0.000189668,0.00007949014,0.00027691285,0.0016926365,0.0032540658],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072266215,0.00005030418,0.000146341,0.000019525394,0.00037262728,0.00031092402,0.00025098078,0.0000040704995,0.3005114,0.000054020322,0.69126177,0.006945815],"study_design_scores_gemma":[0.0015547718,0.003146244,0.0038870405,0.00059229595,0.00020506293,0.0027702288,0.000017055218,3.572884e-8,0.0058669294,0.0000337754,0.98150593,0.0004206259],"about_ca_topic_score_codex":0.0000099091585,"about_ca_topic_score_gemma":0.0000057248517,"teacher_disagreement_score":0.29464445,"about_ca_system_score_codex":0.00006969108,"about_ca_system_score_gemma":0.00010009528,"threshold_uncertainty_score":0.99987644},"labels":[],"label_agreement":null},{"id":"W2558206896","doi":"10.1093/ofid/ofw172.589","title":"Safety of MenB-FHbp (Bivalent rLP2086), a Meningococcal Serogroup B Vaccine, in Young Adults: Results From a Phase 3 Trial","year":2016,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Bivalent (engine); Medicine; Meningococcal vaccine; Neisseria meningitidis; Virology; Immunology; Antigen; Biology; Genetics; Bacteria","score_opus":0.011701506059770545,"score_gpt":0.2784430132193858,"score_spread":0.26674150715961525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558206896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894307,0.00033003138,0.000079365906,0.00038916123,0.0018271833,0.0016296039,0.0038073598,0.000107416476,0.002399175],"genre_scores_gemma":[0.9981606,0.00022423064,0.000013997911,0.000046320914,0.0001163987,0.00028916865,0.00065405003,0.000032031927,0.00046322306],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99752575,0.00035000496,0.0009821771,0.00060016225,0.000038408234,0.0005034771],"domain_scores_gemma":[0.9984146,0.00042790588,0.00041414227,0.0005547905,0.00012232503,0.00006624974],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026518156,0.00032304897,0.0006787324,0.00020408668,0.00022244175,0.000060940718,0.00041102598,0.0002458051,0.0019049437],"category_scores_gemma":[0.00046343106,0.00022986022,0.00021479445,0.0002935513,0.000078280296,0.00051357975,0.00039691004,0.0001530661,0.0001577691],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.538251,0.01099022,0.23424037,0.000039951163,0.0012187415,0.000012632889,0.00071352086,0.0000063939056,0.14248335,0.001465738,0.014380188,0.05619791],"study_design_scores_gemma":[0.80376226,0.0067725233,0.11216056,0.000929239,0.00041309383,0.00005664012,0.00055636046,0.00000875293,0.020058783,0.0014408131,0.05274645,0.0010945322],"about_ca_topic_score_codex":0.0084001515,"about_ca_topic_score_gemma":0.00556673,"teacher_disagreement_score":0.26551124,"about_ca_system_score_codex":0.00012791052,"about_ca_system_score_gemma":0.000118855234,"threshold_uncertainty_score":0.99900746},"labels":[],"label_agreement":null},{"id":"W2560566410","doi":"10.1093/cid/ciw779","title":"Prediction of Outcome From Adult Bacterial Meningitis in a High-HIV-Seroprevalence, Resource-Poor Setting Using the Malawi Adult Meningitis Score (MAMS)","year":2016,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Academy of Medical Sciences; Meningitis Research Foundation; National Institute for Health and Care Research; Wellcome Trust; Wellcome","keywords":"Medicine; Nomogram; Glasgow Coma Scale; Case fatality rate; Confidence interval; Logistic regression; Internal medicine; Mortality rate; Meningitis; Pediatrics; Surgery; Epidemiology","score_opus":0.038368857236805776,"score_gpt":0.3014011713148524,"score_spread":0.2630323140780466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560566410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935931,0.00016204239,0.0001998433,0.0003819791,0.0029384491,0.00041769992,0.002047319,0.00018164655,0.00007793319],"genre_scores_gemma":[0.99847525,0.00016620992,0.000030113146,0.00011620656,0.00075176207,0.00006339894,0.00022337494,0.000038716655,0.00013497866],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99661547,0.0008374026,0.0014620646,0.00058166136,0.00005700057,0.00044638],"domain_scores_gemma":[0.9970559,0.0015257427,0.00059162435,0.00048463716,0.00026432265,0.000077772005],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034952344,0.00030777,0.00068587274,0.000150209,0.00029938566,0.00004876089,0.00025987378,0.00041448761,0.0012793596],"category_scores_gemma":[0.0021960386,0.00019693469,0.00034394063,0.0002563209,0.00046208128,0.0002691033,0.00020231571,0.00033389844,0.00008664947],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032466554,0.0003706982,0.9310274,0.000026928246,0.00022730776,0.0000036072254,0.00005400435,0.000014789948,0.06227337,0.00020259859,0.001197103,0.004277528],"study_design_scores_gemma":[0.006369738,0.0005581071,0.9844529,0.00072096224,0.0004383571,0.00002801086,0.00011179336,0.000050470717,0.004682585,0.0004458871,0.0018036595,0.00033754454],"about_ca_topic_score_codex":0.00095495716,"about_ca_topic_score_gemma":0.00030248432,"teacher_disagreement_score":0.057590783,"about_ca_system_score_codex":0.00008379365,"about_ca_system_score_gemma":0.00007626962,"threshold_uncertainty_score":0.9996336},"labels":[],"label_agreement":null},{"id":"W2561432868","doi":"10.1097/inf.0000000000001512","title":"Cost-effectiveness Comparison of Monovalent C Versus Quadrivalent ACWY Meningococcal Conjugate Vaccination in Canada","year":2016,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec","funders":"","keywords":"Conjugate; Vaccination; Meningococcal vaccine; Medicine; Virology; Mathematics; Immunology; Immunization; Antigen","score_opus":0.03647779832826705,"score_gpt":0.3030766548726906,"score_spread":0.26659885654442356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2561432868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941961,0.00082847173,0.00035723674,0.00022730051,0.0038349794,0.00041678175,0.000044719032,0.000019800345,0.00007460437],"genre_scores_gemma":[0.9991747,0.000473113,0.0000016490956,0.000008984739,0.00024682874,0.00005040813,0.0000051873576,0.00001345835,0.000025652767],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832594,0.00060691393,0.00051699195,0.00016478107,0.000055009335,0.00033033345],"domain_scores_gemma":[0.99837464,0.00079271203,0.00038359378,0.00019154287,0.0001876056,0.00006988556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004921491,0.00017754923,0.00031401138,0.0001839957,0.0002511328,0.000017269933,0.0001760055,0.00007389645,0.0005611709],"category_scores_gemma":[0.00026664688,0.00010453183,0.00010973015,0.00025133157,0.00003090277,0.00013083257,0.00006210637,0.0002944831,0.000030547817],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014908811,0.00028190122,0.98195493,0.00003092932,0.00012681814,0.000003460486,0.000087541506,0.0004829088,0.006689462,0.00013301669,0.00080404204,0.007914094],"study_design_scores_gemma":[0.0071942722,0.00027273086,0.987897,0.000033512675,0.0002558586,0.00006914888,0.00010930849,0.000029644172,0.0026944743,0.00020561565,0.0010325756,0.00020588438],"about_ca_topic_score_codex":0.06395537,"about_ca_topic_score_gemma":0.09339615,"teacher_disagreement_score":0.029440781,"about_ca_system_score_codex":0.00076306076,"about_ca_system_score_gemma":0.00087716227,"threshold_uncertainty_score":0.94227785},"labels":[],"label_agreement":null},{"id":"W2565460586","doi":"10.1016/j.annemergmed.2016.10.008","title":"Interpretation of Cerebrospinal Fluid White Blood Cell Counts in Young Infants With a Traumatic Lumbar Puncture","year":2016,"lang":"en","type":"article","venue":"Annals of Emergency Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences","keywords":"Cerebrospinal fluid; Medicine; Pleocytosis; Lumbar puncture; Meningitis; White blood cell; Confidence interval; CSF pleocytosis; CSF albumin; Gastroenterology; Internal medicine; Surgery","score_opus":0.029677248642233228,"score_gpt":0.3012914923596957,"score_spread":0.27161424371746246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2565460586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937809,0.0013118797,0.00010175995,0.000339121,0.000976406,0.00010920976,0.000021551432,0.000007486375,0.003351664],"genre_scores_gemma":[0.99765337,0.0005778287,0.0000062248932,0.000014164481,0.00003289992,0.000009079114,0.000014999079,0.000006542579,0.0016849036],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99934083,0.000054432563,0.000359805,0.00010371446,0.000024821325,0.00011636944],"domain_scores_gemma":[0.99954987,0.000013248927,0.00016727773,0.00012536804,0.00013372539,0.000010489793],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015932032,0.00008778035,0.00023123607,0.00011303627,0.000021298001,2.9029118e-7,0.00007446673,0.0000605721,0.004407136],"category_scores_gemma":[0.000041785926,0.00004930935,0.00003411228,0.00015249102,0.000050623505,0.000048943493,0.0000138439145,0.000060293078,0.000017923696],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024909806,0.00020871004,0.07851311,0.00010288233,0.000118179894,3.8647025e-7,0.0011675786,0.000002807871,0.90685165,0.000094752984,0.011270574,0.0014202776],"study_design_scores_gemma":[0.005714101,0.005066642,0.8501579,0.0015505188,0.00025187476,0.00004814024,0.0006502617,0.000014112642,0.13114202,0.00050141296,0.0045342715,0.00036871366],"about_ca_topic_score_codex":0.00014707154,"about_ca_topic_score_gemma":0.0001433684,"teacher_disagreement_score":0.7757096,"about_ca_system_score_codex":0.000002745344,"about_ca_system_score_gemma":0.00001836571,"threshold_uncertainty_score":0.996503},"labels":[],"label_agreement":null},{"id":"W2567194800","doi":"10.4049/jimmunol.196.supp.76.11","title":"Naturally-derived bacterial nano-particles engage diverse innate receptors, driving the activation of dendritic cells and leading to the establishment of potent adaptive immune responses.","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"CD80; CD86; Biology; Inflammasome; Cell biology; Immune system; Dendritic cell; Antigen; Acquired immune system; Antigen-presenting cell; T cell; Antigen presentation; Innate immune system; CD40; Microbiology; Immunology; Cytotoxic T cell; In vitro; Inflammation","score_opus":0.015519928188417112,"score_gpt":0.23161061259392943,"score_spread":0.21609068440551232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2567194800","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936032,0.0009985766,0.0002053641,0.0029992035,0.0019513029,0.00021441064,0.000012367311,0.000006229771,0.000009340597],"genre_scores_gemma":[0.99877864,0.00091316306,0.00005342814,0.000028929098,0.00006468634,0.000003958989,0.0000010842898,0.000009946238,0.00014614234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99761474,0.0014535557,0.00057377503,0.00009528418,0.00003702206,0.0002255948],"domain_scores_gemma":[0.9973942,0.0013858371,0.0006659145,0.00025852295,0.0002819631,0.000013549548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013832814,0.00013891955,0.0003314884,0.00012979514,0.00032297426,0.000013421677,0.00036964891,0.00012171131,0.00011893399],"category_scores_gemma":[0.0005052414,0.000058304715,0.000091371905,0.00014404363,0.00039747977,0.00019463009,0.00023092596,0.00031429948,0.000010321512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024624306,0.000053686257,0.0001708412,0.000003298101,0.0003684329,3.6312574e-7,0.0022925232,0.0000065884897,0.9846619,0.00019133752,0.00021136295,0.009577234],"study_design_scores_gemma":[0.00114409,0.000812604,0.025723202,0.00015196884,0.000102047416,0.0001327341,0.0026311034,4.5350825e-7,0.9665152,0.00007292066,0.0026384036,0.00007526408],"about_ca_topic_score_codex":0.00012781555,"about_ca_topic_score_gemma":0.000030005178,"teacher_disagreement_score":0.02555236,"about_ca_system_score_codex":0.000054250628,"about_ca_system_score_gemma":0.0000626258,"threshold_uncertainty_score":0.24840894},"labels":[],"label_agreement":null},{"id":"W2569346046","doi":"10.1139/cjm-2016-0716","title":"Ciprofloxacin-resistant <i>Neisseria meningitidis</i> in Canada: likely imported strains","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"BC Mental Health & Substance Use Services; Public Health Agency of Canada","funders":"National Institutes of Health; European Commission; University of Oxford; Wellcome Trust","keywords":"Neisseria meningitidis; Ciprofloxacin; Meningococcal disease; Microbiology; Outbreak; Virology; Medicine; Neisseriaceae; Biology; Bacteria; Antibiotics","score_opus":0.01558102020088567,"score_gpt":0.22192496685036905,"score_spread":0.20634394664948338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2569346046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99347675,0.0014036525,0.0000033102694,0.0010234242,0.0032095548,0.000099212055,0.0002440282,0.0000036186311,0.0005364408],"genre_scores_gemma":[0.9993492,0.000035436504,0.000020994326,0.00013294606,0.000091800335,0.0000021899734,0.000054946875,0.000015544092,0.0002969602],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984994,0.00012420869,0.0006127909,0.00018058855,0.0000061217474,0.00057687564],"domain_scores_gemma":[0.99876267,0.0000328768,0.0005612531,0.0003365389,0.00016187478,0.00014477587],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029801126,0.00018881608,0.00047094483,0.00025674966,0.00044024322,0.000046199155,0.00053500565,0.00022532033,0.0010595871],"category_scores_gemma":[0.000156404,0.00016809069,0.00009400199,0.0000649237,0.00018739013,0.00013127718,0.000030229501,0.0004375988,0.000024896155],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059781938,0.000011972686,0.049894117,0.0000055586174,0.00011322988,0.000108277374,0.00008105233,0.0000025888412,0.937509,0.00016563517,0.011236695,0.00081208505],"study_design_scores_gemma":[0.0030389319,0.00035600385,0.5322683,0.00010909424,0.00006733588,0.002231372,0.00042180505,4.157171e-7,0.07987855,0.00010421417,0.38107935,0.00044461497],"about_ca_topic_score_codex":0.94880706,"about_ca_topic_score_gemma":0.99869615,"teacher_disagreement_score":0.8576305,"about_ca_system_score_codex":0.0004965396,"about_ca_system_score_gemma":0.0075587267,"threshold_uncertainty_score":0.99985355},"labels":[],"label_agreement":null},{"id":"W2570834910","doi":"10.1177/2051013616681365","title":"Multicomponent meningococcal B vaccination (4CMenB) of adolescents and college students in the United States","year":2017,"lang":"en","type":"review","venue":"Therapeutic Advances in Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"GlaxoSmithKline; Pfizer","keywords":"Outbreak; Meningococcal disease; Vaccination; Incidence (geometry); Meningococcal vaccine; Medicine; Herd immunity; Population; Carriage; Disease; Pediatrics; Environmental health; Neisseria meningitidis; Virology; Immunology; Immunization; Antigen; Biology; Internal medicine","score_opus":0.05675772300140332,"score_gpt":0.39293213624383255,"score_spread":0.33617441324242925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2570834910","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035043336,0.9631076,0.000008444159,0.00003445794,0.0006022745,0.0011075762,0.000057762925,0.00001604407,0.000022519567],"genre_scores_gemma":[0.06171621,0.93778217,0.00000809948,0.000019086681,0.000035612873,0.00014587068,0.000191383,0.000023783597,0.00007779521],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979641,0.0006343134,0.0007578954,0.0003252344,0.000039181206,0.00027930937],"domain_scores_gemma":[0.9986074,0.0003261634,0.0005868607,0.0004091542,0.000058998045,0.000011416856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051493786,0.00037103987,0.0011809939,0.0004784,0.00014403739,0.000028873646,0.0006256423,0.00027418963,0.000045928376],"category_scores_gemma":[0.000037682606,0.00023181173,0.00010576604,0.00029458653,0.000053145544,0.00017535356,0.00014336055,0.00039513735,0.00000854574],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018768382,0.00071458763,0.010664107,0.0038768784,0.00020932696,0.0000030794859,0.00053991214,0.000007978255,0.00007836424,0.0002522908,0.000024934301,0.9834409],"study_design_scores_gemma":[0.0021634435,0.00013537475,0.015628552,0.004530631,0.00022928565,0.00004235854,0.0002593732,0.000005541709,0.000017306964,0.00023192068,0.97647905,0.0002771773],"about_ca_topic_score_codex":0.00017075341,"about_ca_topic_score_gemma":0.00026875891,"teacher_disagreement_score":0.98316365,"about_ca_system_score_codex":0.000053559204,"about_ca_system_score_gemma":0.000029543631,"threshold_uncertainty_score":0.9453008},"labels":[],"label_agreement":null},{"id":"W2573241270","doi":"10.1128/genomea.01506-16","title":"First Complete Genome Sequence of Haemophilus influenzae Serotype a","year":2017,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Génome Québec; McGill University","keywords":"Haemophilus influenzae; Serotype; Biology; Whole genome sequencing; Pathogen; Virology; Genome; Microbiology; Human pathogen; Genetics; Gene; Antibiotics","score_opus":0.06660638753214614,"score_gpt":0.29203129874307227,"score_spread":0.22542491121092612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2573241270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935802,0.00053714437,0.00004164224,0.00021917581,0.0013333923,0.0002909242,0.0010133582,0.000035596826,0.002948568],"genre_scores_gemma":[0.99708587,0.00013692921,0.000059756014,0.00009294515,0.000076336284,0.00002531617,0.00036437443,0.000012788629,0.0021456631],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990418,0.000034533514,0.00032071606,0.00025920328,0.000024919565,0.00031881928],"domain_scores_gemma":[0.9987399,0.000014843374,0.00032329615,0.00073658855,0.00016094516,0.00002444991],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015337359,0.0001686624,0.00029321862,0.000076065895,0.00079786335,0.000049676248,0.0004954469,0.00012951413,0.0008577746],"category_scores_gemma":[0.000038801583,0.00015625768,0.000075680364,0.000058114474,0.0002039768,0.0002109218,0.0002533878,0.00012207033,0.00088192965],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008650098,0.000082883096,0.0127633,0.000032453354,0.00018682721,0.0000018542148,0.0001888583,0.000023234923,0.9859799,0.0002525079,0.00020575947,0.00019592282],"study_design_scores_gemma":[0.0012903855,0.0002863454,0.27323276,0.000030443744,0.0000392942,0.000029373738,0.000024799323,0.000002652988,0.0013119081,0.00022483531,0.7233014,0.00022580154],"about_ca_topic_score_codex":0.0007249498,"about_ca_topic_score_gemma":0.00011128348,"teacher_disagreement_score":0.984668,"about_ca_system_score_codex":0.000044071712,"about_ca_system_score_gemma":0.000043623153,"threshold_uncertainty_score":0.999896},"labels":[],"label_agreement":null},{"id":"W2579926597","doi":"10.1093/ofid/ofw172.876","title":"Paediatric Investigators Collaborative Network on Infections in Canada (PICNIC) Study of the Epidemiology of Bacterial and Fungal Meningitis in Infants Aged &lt;90 Days","year":2016,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Children's Hospital of Eastern Ontario; University of Ottawa; University of British Columbia; Hospital for Sick Children; University of Alberta; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Picnic; Medicine; Epidemiology; Meningitis; Bacterial meningitis; Pathogenic organism; Pediatrics; Intensive care medicine; Microbiology; Internal medicine; Biology","score_opus":0.012183649094188462,"score_gpt":0.2459495394278964,"score_spread":0.23376589033370795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2579926597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963057,0.00035878966,8.2253695e-7,0.00015680556,0.0015955153,0.0010325677,0.00028626423,0.000011685894,0.00025185748],"genre_scores_gemma":[0.999558,0.00011311476,0.0000017336822,0.000059972735,0.00004025996,0.00016774994,0.000016385378,0.000013854721,0.00002896375],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997357,0.0012738036,0.00065860286,0.0003161625,0.000026002175,0.00036839533],"domain_scores_gemma":[0.99794644,0.0012180775,0.0004073395,0.00030311884,0.0000775377,0.000047456873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033095645,0.0002084342,0.0006235062,0.00016843119,0.00021178165,0.000009766238,0.00022017253,0.0001262659,0.00021972628],"category_scores_gemma":[0.0010695895,0.00013463374,0.000048400252,0.000733626,0.00016355832,0.00018086647,0.000345306,0.00016412183,0.000002537489],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026057957,0.00048804338,0.993192,0.0000080531745,0.00011711709,0.0000012569911,0.00015285063,0.00012432972,0.002051142,0.00048793553,0.0021497973,0.00096684915],"study_design_scores_gemma":[0.0042282087,0.0009274277,0.9925798,0.000098499484,0.000055601326,0.000010984832,0.00034873767,8.7575086e-7,0.00045483702,0.00057441025,0.0005601956,0.00016042887],"about_ca_topic_score_codex":0.37728658,"about_ca_topic_score_gemma":0.91950226,"teacher_disagreement_score":0.54221565,"about_ca_system_score_codex":0.00018722028,"about_ca_system_score_gemma":0.0007686144,"threshold_uncertainty_score":0.6268601},"labels":[],"label_agreement":null},{"id":"W2579970513","doi":"10.3892/etm.2017.4082","title":"Role of neural barriers in the pathogenesis and outcome of Streptococcus pneumoniae meningitis","year":2017,"lang":"en","type":"article","venue":"Experimental and Therapeutic Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Ben-Gurion University of the Negev","keywords":"Streptococcus pneumoniae; Meningitis; Medicine; Neisseria meningitidis; Immunology; Blood–brain barrier; Central nervous system; Biology; Antibiotics; Internal medicine; Microbiology; Surgery","score_opus":0.023469499761393252,"score_gpt":0.302179223603733,"score_spread":0.2787097238423398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2579970513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876364,0.011457804,6.560255e-7,0.0003032385,0.00016729308,0.00013124046,0.000007431857,0.0000035503103,0.00029240633],"genre_scores_gemma":[0.99979115,0.000089095614,0.0000015135385,0.000036914378,0.000020486295,0.000015482206,0.0000031629581,0.000003930018,0.000038257618],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99953246,0.0000651703,0.00019689633,0.00010163741,0.0000131388215,0.000090694106],"domain_scores_gemma":[0.9996463,0.00004569749,0.000113420196,0.00017086335,0.000010714245,0.0000129853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014007931,0.00008372787,0.00021302568,0.000035685684,0.00014054359,0.0000051558663,0.00009766815,0.000049239206,0.00019623214],"category_scores_gemma":[0.00001455198,0.00004799871,0.00002078384,0.000020585725,0.00043215672,0.000031764645,0.000040072726,0.000057086447,4.9853804e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029610319,0.000023489434,0.19531675,0.0000048831325,0.000026902728,2.900978e-7,0.0019939407,3.3703813e-8,0.7958367,0.00080540625,0.000002186877,0.005959806],"study_design_scores_gemma":[0.0018583895,0.0006671364,0.74622005,0.00003267954,0.000034948738,0.000039763956,0.00803414,0.000007594518,0.24156779,0.00018321192,0.001273584,0.00008068373],"about_ca_topic_score_codex":0.00045171668,"about_ca_topic_score_gemma":0.000015893133,"teacher_disagreement_score":0.5542689,"about_ca_system_score_codex":0.0000028733818,"about_ca_system_score_gemma":0.0000038333374,"threshold_uncertainty_score":0.21486044},"labels":[],"label_agreement":null},{"id":"W2582451753","doi":"10.1093/jac/dkw565","title":"Antibiotic susceptibility and molecular analysis of invasive<i>Haemophilus influenzae</i>in Canada, 2007 to 2014","year":2016,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Government of Prince Edward Island; Government of New Brunswick; Public Health Ontario; Dalhousie University; St. John’s Health Sciences Centre; University of Toronto; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; BC Mental Health & Substance Use Services; Nova Scotia Health Authority; Public Health Agency of Canada","funders":"Association of Medical Microbiology and Infectious Disease Canada; Wellcome Trust","keywords":"Multilocus sequence typing; Haemophilus influenzae; Microbiology; Ampicillin; Biology; Antibiotics; Cephalosporin; Sulfamethoxazole; Amp resistance; Antibiotic resistance; Trimethoprim; Serotype; Genotype; Genetics; Gene","score_opus":0.007009381195968192,"score_gpt":0.2298636089446445,"score_spread":0.2228542277486763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2582451753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99741125,0.0002640881,0.00012562735,0.0016209149,0.000405647,0.00010122183,0.000046196998,0.0000031355555,0.000021938795],"genre_scores_gemma":[0.9985448,0.0004829332,0.00012833385,0.00076642405,0.000028904586,1.9226202e-7,0.0000024636079,0.000010951831,0.00003498337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885917,0.000102622726,0.0006158959,0.00017205132,0.000027872711,0.00022237736],"domain_scores_gemma":[0.99909765,0.00011540022,0.00034364738,0.00019168484,0.00020764221,0.000043980122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029548773,0.00014928408,0.00062457164,0.00041298996,0.00003155724,0.000008518018,0.00015611667,0.00011052108,0.0004139353],"category_scores_gemma":[0.00006673832,0.00010351926,0.00015234639,0.0003854828,0.00007084964,0.000091952046,0.000030163626,0.00011498907,0.0000055499404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003441774,0.000077627774,0.14309421,0.000010650509,0.0005888975,0.000004664362,0.000056202163,0.000025568004,0.84949875,0.000007861499,0.004926447,0.0013649248],"study_design_scores_gemma":[0.0018171109,0.00017573303,0.20895752,0.00008376122,0.0001527752,0.0000583023,0.000023886303,3.154394e-7,0.785869,0.000009509477,0.0027204377,0.00013164264],"about_ca_topic_score_codex":0.09251189,"about_ca_topic_score_gemma":0.23145616,"teacher_disagreement_score":0.13894427,"about_ca_system_score_codex":0.00012868096,"about_ca_system_score_gemma":0.0003803692,"threshold_uncertainty_score":0.9135311},"labels":[],"label_agreement":null},{"id":"W2586315485","doi":"10.1093/pch/17.suppl_a.27aa","title":"Serogroup C Invasive Meningococcal Disease (IMD) In Ontario, Canada, 2000–2010: Vaccine Impact Assessment","year":2012,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Medicine; Meningococcal vaccine; Virology; Disease; Neisseria meningitidis; Immunology; Biology; Internal medicine; Immunization; Bacteria; Immune system","score_opus":0.012905778463240718,"score_gpt":0.26806576385325426,"score_spread":0.25515998539001356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586315485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876166,0.005556341,0.000018702165,0.0025942586,0.003170142,0.0005311982,0.0001218188,0.000043768305,0.00034715288],"genre_scores_gemma":[0.99731356,0.00043278205,0.000059267786,0.00064817,0.00042337147,0.000047999936,0.0005708777,0.000025268737,0.0004786932],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978663,0.00025951004,0.0005361478,0.00030078995,0.00004578407,0.000991466],"domain_scores_gemma":[0.9989369,0.00015909516,0.00024021232,0.0002983846,0.000057656544,0.00030774143],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054261525,0.00028266053,0.00044908098,0.00021328803,0.00035661634,0.000019754545,0.00015919619,0.00016023991,0.002198312],"category_scores_gemma":[0.000064373904,0.00024192753,0.000107875,0.00033000522,0.000014355188,0.00020063258,0.00009960095,0.0007822782,0.0000683039],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008998196,0.00036002268,0.9645499,0.000027245944,0.000056951998,0.0000022254442,0.00043800953,0.000014656244,0.0001755672,0.00016889232,0.033611808,0.00050472235],"study_design_scores_gemma":[0.001425295,0.00014364466,0.96780205,0.00002208246,0.000032379558,0.000030830513,0.000054000637,0.0000013452147,0.000030937328,0.000019425866,0.030210754,0.00022724435],"about_ca_topic_score_codex":0.96688694,"about_ca_topic_score_gemma":0.985465,"teacher_disagreement_score":0.018578041,"about_ca_system_score_codex":0.0021764732,"about_ca_system_score_gemma":0.0051190173,"threshold_uncertainty_score":0.9987138},"labels":[],"label_agreement":null},{"id":"W2586594974","doi":"10.1097/inf.0000000000001438","title":"In Reply","year":2017,"lang":"en","type":"letter","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Stollery Children's Hospital","funders":"","keywords":"Torticollis; Medicine; Neisseria meningitidis; Pediatrics; Meningitis; Haemophilus; Surgery; Biology","score_opus":0.011339912270974284,"score_gpt":0.24856720887415593,"score_spread":0.23722729660318165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586594974","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34266087,0.0065333624,0.0000128587,0.6172062,0.029390134,0.0005359726,0.00013581019,0.00012119113,0.00340356],"genre_scores_gemma":[0.30422956,0.008672177,0.000004796443,0.52609634,0.112912774,0.00017574945,0.0002234171,0.00023191822,0.04745325],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99808395,0.0005021973,0.0005059904,0.00028835214,0.000043170934,0.00057631865],"domain_scores_gemma":[0.9981239,0.00024464753,0.00070743624,0.00074486807,0.00013499566,0.00004417625],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005109668,0.0003477036,0.00041459437,0.00043509883,0.0011704911,0.00024214621,0.00058247487,0.00056903623,0.0021852045],"category_scores_gemma":[0.00043521225,0.00022827217,0.00035802083,0.00013841913,0.000105468855,0.00022295819,0.00012974636,0.0043702703,0.0011385297],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004582735,0.00006619578,0.029487986,0.000032922435,0.000102416154,0.00028969496,0.000035678157,0.0000035468,0.00003715591,0.000007218082,0.9697042,0.00018717637],"study_design_scores_gemma":[0.0009723803,0.000070935756,0.015098907,0.000022205737,0.00047708335,0.0036122014,0.0000034480965,3.6591786e-7,0.0000040663745,0.0018967752,0.9775314,0.00031028263],"about_ca_topic_score_codex":0.00028090802,"about_ca_topic_score_gemma":0.000016332646,"teacher_disagreement_score":0.09110987,"about_ca_system_score_codex":0.00013245472,"about_ca_system_score_gemma":0.00041946076,"threshold_uncertainty_score":0.9996392},"labels":[],"label_agreement":null},{"id":"W2586726937","doi":"10.1093/pch/17.suppl_c.9","title":"Meningococcal Immunization: Guidelines and Issues of Vaccine Uptake","year":2012,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; London Health Sciences Centre","funders":"","keywords":"Meningococcal vaccine; Immunization; Medicine; Virology; Immunology; Antibody","score_opus":0.026509977552748747,"score_gpt":0.3099318096576398,"score_spread":0.283421832104891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586726937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84875107,0.14013833,0.00021045264,0.007969738,0.0020491576,0.00028413063,0.00004172184,0.00008484681,0.000470562],"genre_scores_gemma":[0.9838955,0.013739331,0.00081313157,0.0003480476,0.00081044325,0.000007377384,0.00012492492,0.000016819267,0.00024447305],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894226,0.00008564464,0.0005150788,0.00013048814,0.0000162875,0.00031024747],"domain_scores_gemma":[0.9993507,0.000049705202,0.00021888355,0.0001849598,0.00014732865,0.00004841523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005446645,0.00012658378,0.00030028794,0.00013016812,0.0002511924,0.0000073064625,0.000077068085,0.00013271897,0.00025240704],"category_scores_gemma":[0.00012000727,0.00010636766,0.000042627307,0.00024660924,0.000022160475,0.00011515708,0.000075781034,0.0001570363,0.00003668769],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016098088,0.0006958732,0.7988784,0.00031787917,0.00024568447,1.6010699e-7,0.0032645003,0.00000943031,0.017380644,0.02045777,0.10170258,0.056886155],"study_design_scores_gemma":[0.0014541122,0.00027151965,0.40635207,0.000036216505,0.00005018724,0.00007979728,0.00019560373,0.000005158081,0.0018811149,0.00009485209,0.58937246,0.00020688416],"about_ca_topic_score_codex":0.00035649532,"about_ca_topic_score_gemma":0.000018817125,"teacher_disagreement_score":0.4876699,"about_ca_system_score_codex":0.000016204458,"about_ca_system_score_gemma":0.0000417531,"threshold_uncertainty_score":0.43375474},"labels":[],"label_agreement":null},{"id":"W2587504266","doi":"10.1128/iai.01063-16","title":"Protective Role of Passively Transferred Maternal Cytokines against Bordetella pertussis Infection in Newborn Piglets","year":2017,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"Canadian Institutes of Health Research; Krembil Foundation; Government of Canada; Bill and Melinda Gates Foundation","keywords":"Bordetella pertussis; Immunology; Antibody; Biology; Immune system; Cytokine; Vaccination; Colostrum; Tumor necrosis factor alpha; Immunity; Immunization; Interleukin 10; Proinflammatory cytokine; Inflammation; Bacteria","score_opus":0.014509565428889811,"score_gpt":0.2545134367923868,"score_spread":0.240003871363497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587504266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674976,0.000117569594,0.0001500652,0.00011838207,0.0007294319,0.0003195571,0.000023283437,0.000054159453,0.0017377698],"genre_scores_gemma":[0.9990548,0.00066110736,0.000008865524,0.000012214734,0.000043324922,0.00005251222,0.000018737557,0.000013273638,0.00013518048],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99903363,0.00023478498,0.00031418912,0.00019579408,0.000017757471,0.00020382227],"domain_scores_gemma":[0.9992935,0.00003348904,0.0002157676,0.00030481868,0.00013117201,0.00002123332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021618699,0.0001838012,0.00029994638,0.00021627551,0.00066357624,0.00006913477,0.000093939176,0.0002632929,0.00013992567],"category_scores_gemma":[0.00014175054,0.00014836168,0.000090766036,0.000094765885,0.00018391175,0.00036639356,0.00007166641,0.00035420104,0.000019087141],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020215973,0.0001742055,0.32408735,0.000024223882,0.000069505935,3.2548408e-7,0.00026122082,0.00000456981,0.59264743,0.00005599784,0.000012536369,0.082460456],"study_design_scores_gemma":[0.0011978552,0.00022502817,0.8174794,0.000065097505,0.0000200111,0.000030895397,0.000037658716,0.000012849502,0.17200907,0.00022969034,0.008556073,0.00013638787],"about_ca_topic_score_codex":0.035169348,"about_ca_topic_score_gemma":0.004647443,"teacher_disagreement_score":0.49339205,"about_ca_system_score_codex":0.000040439314,"about_ca_system_score_gemma":0.000033463348,"threshold_uncertainty_score":0.97125554},"labels":[],"label_agreement":null},{"id":"W2587810485","doi":"10.1093/cid/cix027","title":"Timing of Prenatal Tdap Immunization and Protection Against Pertussis","year":2017,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Immunization; Whooping cough; Immunology; Pediatrics; Vaccination; Antibody","score_opus":0.046874133183926414,"score_gpt":0.31962455012717494,"score_spread":0.27275041694324853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587810485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9580473,0.003644612,0.00018127603,0.024982147,0.009022924,0.0013300532,0.0006615456,0.00042506502,0.0017051115],"genre_scores_gemma":[0.9817983,0.0015673286,0.000004605321,0.010270568,0.002393036,0.00013919664,0.0016840991,0.00007750052,0.0020653966],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99805087,0.00044353714,0.00072581467,0.00048563094,0.000027164257,0.0002670057],"domain_scores_gemma":[0.9979676,0.00036373542,0.00080734,0.00061285903,0.00021613888,0.000032336517],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0001890789,0.00031655774,0.0007334681,0.00017557874,0.0004979718,0.0000792659,0.00019485722,0.0013856988,0.00029093336],"category_scores_gemma":[0.0011742659,0.00027469953,0.00032734883,0.0000708787,0.0005016554,0.0001901036,0.0001902749,0.0011518986,0.00007235011],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020454414,0.0011914554,0.08792076,0.0014641655,0.0023994457,0.000029626033,0.00010115431,0.000006091871,0.007241497,0.00004225681,0.7643419,0.13505712],"study_design_scores_gemma":[0.0034906731,0.0013160014,0.1300258,0.0010702279,0.001343714,0.00007952771,0.000023034616,0.000037697628,0.0018191776,0.00041567377,0.8593258,0.0010526574],"about_ca_topic_score_codex":0.00014875585,"about_ca_topic_score_gemma":0.000013431295,"teacher_disagreement_score":0.13400447,"about_ca_system_score_codex":0.00003114042,"about_ca_system_score_gemma":0.00010928336,"threshold_uncertainty_score":0.9999705},"labels":[],"label_agreement":null},{"id":"W2588190621","doi":"10.1093/cid/cix154","title":"Impact of an Immunization Campaign to Control an Increased Incidence of Serogroup B Meningococcal Disease in One Region of Quebec, Canada","year":2017,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Université Laval; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec","funders":"","keywords":"Medicine; Meningococcal disease; Incidence (geometry); Immunization; Meningococcal vaccine; Neisseria meningitidis; Disease control; Meningococcal Infections; Environmental health; Pediatrics; Demography; Virology; Immunology; Antibody","score_opus":0.02653355790422013,"score_gpt":0.33423489436161363,"score_spread":0.3077013364573935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588190621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99874264,0.00012069457,0.00011322811,0.000029871057,0.00032264306,0.0004084243,0.00022468623,0.000024329462,0.000013465036],"genre_scores_gemma":[0.9996754,0.000031880532,0.0000036080671,0.00002951203,0.000059491507,0.000026387042,0.00014676203,0.000014700862,0.000012246309],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99801195,0.0006291243,0.00083593576,0.00027772106,0.00003604488,0.00020920577],"domain_scores_gemma":[0.99762464,0.00037119674,0.0006946635,0.0008025668,0.00032823178,0.00017871313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002801856,0.00016781663,0.0006537742,0.00012176999,0.00014567874,0.00001854384,0.0002973536,0.00015634419,0.000111517096],"category_scores_gemma":[0.0020804498,0.00015109882,0.00017902683,0.00012943425,0.00027622253,0.00032805945,0.0000811369,0.00014719016,0.0000017453831],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001327525,0.002091192,0.9776399,0.00003533443,0.00015640186,0.0000033873418,0.000037168003,0.00027380418,0.016641203,0.00008840681,0.000069362606,0.0016363291],"study_design_scores_gemma":[0.0025739167,0.0011823757,0.9948941,0.00011629705,0.00014680157,0.0000016507801,0.000021173182,0.000059895625,0.0007410193,0.00010116122,0.000015479998,0.00014611403],"about_ca_topic_score_codex":0.8109348,"about_ca_topic_score_gemma":0.7292679,"teacher_disagreement_score":0.08166692,"about_ca_system_score_codex":0.000093247494,"about_ca_system_score_gemma":0.00086176785,"threshold_uncertainty_score":0.6161631},"labels":[],"label_agreement":null},{"id":"W2588440521","doi":"10.1093/pch/6.4.184","title":"Pertussis immunization for adolescents: What are we waiting for?","year":2001,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Grace (Canada); Dalhousie University","funders":"","keywords":"Medicine; Diphtheria; Tetanus; Immunization; Pertussis vaccine; Pediatrics; Whooping cough; Population; Inactivated Poliovirus Vaccine; Vaccination; Hib vaccine; Immunology; Conjugate vaccine; Environmental health; Antibody","score_opus":0.02277177639064616,"score_gpt":0.2775117859336711,"score_spread":0.25474000954302495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588440521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7433463,0.1177278,0.03834468,0.07775019,0.016650887,0.0048694187,0.0004644276,0.00063150557,0.00021481089],"genre_scores_gemma":[0.9509568,0.045655873,0.00024591235,0.0012797294,0.0009308762,0.00010623467,0.00056405476,0.00003744577,0.00022305759],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988305,0.000084669504,0.0003684973,0.0002519561,0.000014068986,0.00045031178],"domain_scores_gemma":[0.9991911,0.00013054507,0.00028873415,0.0001924958,0.00015846311,0.00003865617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032749618,0.00015337185,0.00027107453,0.00015228163,0.0008722742,0.00005760371,0.000113952985,0.00018847882,0.000049933453],"category_scores_gemma":[0.00012577954,0.00014057699,0.00012680191,0.00025158955,0.000017388093,0.00023552662,0.000034841778,0.00016772712,0.000026413105],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012143108,0.0018030442,0.3647141,0.0021331958,0.00030705926,7.0133257e-7,0.0033671001,0.00009674028,0.004093124,0.006881558,0.07624166,0.53914744],"study_design_scores_gemma":[0.005565307,0.0005859803,0.06427809,0.0006268615,0.000107764994,0.00007133717,0.0022341348,0.00019529441,0.0004651435,0.0005595209,0.9247739,0.00053669134],"about_ca_topic_score_codex":0.00007931158,"about_ca_topic_score_gemma":0.00007887766,"teacher_disagreement_score":0.8485322,"about_ca_system_score_codex":0.00006763429,"about_ca_system_score_gemma":0.00007241004,"threshold_uncertainty_score":0.67089164},"labels":[],"label_agreement":null},{"id":"W2588468701","doi":"10.1016/j.ijid.2017.02.003","title":"Characteristics of invasive Haemophilus influenzae serotype a (Hia) from Nunavik, Canada and comparison with Hia strains in other North American Arctic regions","year":2017,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; Montreal Children's Hospital; Institut National de Santé Publique du Québec; Nunavik Regional Board of Health and Social Services; Public Health Agency of Canada","funders":"Wellcome Trust; Wellcome","keywords":"Pulsed-field gel electrophoresis; Serotype; Arctic; Microbiology; Biology; Multilocus sequence typing; Genotype; Genetics; Gene; Ecology","score_opus":0.013533945614165729,"score_gpt":0.26194255409821593,"score_spread":0.2484086084840502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588468701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837554,0.00012544377,0.00001881633,0.00023532083,0.00073688314,0.00007412913,0.00039291428,0.0000058501337,0.000035084508],"genre_scores_gemma":[0.99957967,0.00011325018,0.000012730133,0.000104410996,0.0001288858,0.000003865532,0.000034823035,0.000010538182,0.000011806723],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999252,0.00006020483,0.00039983267,0.000115179464,0.000054503977,0.00011823689],"domain_scores_gemma":[0.99820936,0.00012610514,0.0010167579,0.00015493477,0.0004476742,0.000045146764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000037121215,0.0001286158,0.00035101507,0.00013804926,0.00010681226,0.000054712258,0.00022726637,0.00003688457,0.000058970687],"category_scores_gemma":[0.00027232783,0.000104955914,0.00005170629,0.000050378927,0.00022441165,0.00018105486,0.00005416523,0.00019321144,0.0000016456298],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003425567,0.0002402152,0.9947381,0.000008488002,0.0005012583,0.000025805688,0.00014553049,0.000043860695,0.0018460358,0.00004571832,0.00012021389,0.0019422215],"study_design_scores_gemma":[0.0013487249,0.00028678827,0.99697727,0.00015171834,0.00008822986,0.0001229874,0.00010064663,0.0000039774936,0.0003094616,0.00009345966,0.00040908623,0.000107629785],"about_ca_topic_score_codex":0.5494833,"about_ca_topic_score_gemma":0.82977736,"teacher_disagreement_score":0.28029406,"about_ca_system_score_codex":0.00012537777,"about_ca_system_score_gemma":0.0004350115,"threshold_uncertainty_score":0.45351675},"labels":[],"label_agreement":null},{"id":"W2589432820","doi":"10.1097/aog.0000000000001888","title":"Safety of Tetanus, Diphtheria, and Pertussis Vaccination During Pregnancy","year":2017,"lang":"en","type":"review","venue":"Obstetrics and Gynecology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Tetanus; Diphtheria; Pregnancy; Medicine; Vaccination; Pediatrics; Virology; Biology","score_opus":0.04032717634811523,"score_gpt":0.30219277897903846,"score_spread":0.26186560263092323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2589432820","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002941252,0.993112,0.0000020900077,0.0000173363,0.00241289,0.00042403754,0.000112948546,0.000016973643,0.0009604319],"genre_scores_gemma":[0.0046971366,0.9928779,0.000014239772,0.0000015055639,0.000028295628,0.00004334491,0.0001443172,0.0000245129,0.0021687206],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986246,0.0001895847,0.0005466614,0.00037703713,0.0000116729425,0.00025039946],"domain_scores_gemma":[0.9971191,0.001769632,0.00064063177,0.00036364037,0.00008121425,0.000025734107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107521315,0.00029443277,0.0013855023,0.0003117569,0.00037634617,0.000029569368,0.00016653533,0.00082313677,0.00050919125],"category_scores_gemma":[0.0018919179,0.00022953832,0.00015414503,0.00013329492,0.00009146069,0.00008344635,0.00021358173,0.0002772528,0.000014783114],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000054684806,0.000054513705,0.00023541275,0.0032010202,0.00026727768,0.0000034310222,0.00003673049,1.0108766e-8,0.0001249269,0.0003563752,0.000031976364,0.99568284],"study_design_scores_gemma":[0.00076698646,0.00013914888,0.0040520937,0.0012083262,0.0004966516,0.00017489349,0.000011272562,1.1362032e-7,0.00002856778,0.00003520556,0.9928508,0.00023595347],"about_ca_topic_score_codex":0.00003205983,"about_ca_topic_score_gemma":0.000020922032,"teacher_disagreement_score":0.9954469,"about_ca_system_score_codex":0.000049114667,"about_ca_system_score_gemma":0.00007001441,"threshold_uncertainty_score":0.9360301},"labels":[],"label_agreement":null},{"id":"W2589589242","doi":"10.1128/jcm.02436-16","title":"Short-Read Whole-Genome Sequencing for Laboratory-Based Surveillance of Bordetella pertussis","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Public Health Ontario; University of Toronto","funders":"Public Health Ontario; University of Toronto","keywords":"Bordetella pertussis; Whole genome sequencing; Whooping cough; Biology; Microbiology; DNA sequencing; Genome; Bordetella; Computational biology; Virology; Genetics; Bacteria; Gene; Vaccination","score_opus":0.0717248143616861,"score_gpt":0.37567183988444436,"score_spread":0.30394702552275826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2589589242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924538,0.0009129158,0.00054675003,0.001107083,0.004124163,0.00016241975,0.00060070795,0.000010443832,0.000081679456],"genre_scores_gemma":[0.99835515,0.00014428425,0.00065247813,0.00014714734,0.0004239211,0.0000035807973,0.000060239134,0.000018242486,0.00019495594],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974081,0.0004043097,0.0016425491,0.00023184733,0.000009740547,0.00030344422],"domain_scores_gemma":[0.9957877,0.0011150826,0.0017180952,0.00047391249,0.00085894857,0.000046285368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020399832,0.00018557686,0.0011197783,0.0001130699,0.00026496823,0.000024800805,0.0005404518,0.0005761592,0.0001966666],"category_scores_gemma":[0.002281869,0.00013792898,0.0005273202,0.000050022598,0.00048978074,0.00009983588,0.0000706259,0.0004328913,0.000022615699],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007887575,0.00015219479,0.04178421,0.000028567401,0.00030137025,0.0000018754664,0.000016595075,0.0000096460335,0.9515295,0.000039454462,0.0011930458,0.0041547827],"study_design_scores_gemma":[0.0059698406,0.0030051668,0.14838007,0.00012423968,0.00018330883,0.00022229076,0.000061601386,0.0000055572896,0.0836775,0.00010403612,0.7578874,0.00037895306],"about_ca_topic_score_codex":0.000021218562,"about_ca_topic_score_gemma":0.000055212247,"teacher_disagreement_score":0.86785203,"about_ca_system_score_codex":0.000031193682,"about_ca_system_score_gemma":0.000356935,"threshold_uncertainty_score":0.56245804},"labels":[],"label_agreement":null},{"id":"W2594717901","doi":"","title":"Pertussis Vaccine Effectiveness and Waning Immunity","year":2015,"lang":"en","type":"dissertation","venue":"TSpace (University of Toronto)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Ontario Ministry of Health and Long-Term Care; Institute for Clinical Evaluative Sciences","keywords":"Immunity; Medicine; Immunology; Virology; Immune system","score_opus":0.010968287525554283,"score_gpt":0.2516036392428606,"score_spread":0.24063535171730632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594717901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97259986,0.0050114463,0.000009095821,0.000035550718,0.0008972711,0.00017176513,0.00002727765,0.00004920113,0.02119855],"genre_scores_gemma":[0.9873634,0.0008225348,0.000039855433,0.0000015456981,0.000020725183,5.1013234e-7,0.00047773792,0.000014834385,0.011258835],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99930394,0.0002080109,0.00008334947,0.00022800526,0.00001763123,0.00015908814],"domain_scores_gemma":[0.99928594,0.00007872541,0.00018079448,0.00022106756,0.00020442223,0.000029067898],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021004675,0.00018819896,0.00044741554,0.00005379102,0.00027599884,0.000008048721,0.00015443834,0.00043896434,0.010911506],"category_scores_gemma":[0.000034003322,0.00021007459,0.000091057416,0.00004076765,0.00003595587,0.0002183411,0.00007272592,0.00020678571,0.000041083116],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003989457,0.00030675385,0.003276121,0.0006912216,0.0014455331,0.0000053595422,0.02274759,0.000001562321,0.76499647,0.0004629086,0.0038507564,0.19822626],"study_design_scores_gemma":[0.0021429935,0.00031796357,0.9603109,0.00022025277,0.00037199943,0.00001627125,0.023633622,0.000002079965,0.0029206537,0.000029645196,0.0097042145,0.00032942268],"about_ca_topic_score_codex":0.18972337,"about_ca_topic_score_gemma":0.08121198,"teacher_disagreement_score":0.95703477,"about_ca_system_score_codex":0.00013163133,"about_ca_system_score_gemma":0.00007855742,"threshold_uncertainty_score":0.9899927},"labels":[],"label_agreement":null},{"id":"W2597674775","doi":"","title":"Should longhaul flights carry antibiotics on board for the treatment of acute bacterial meningitis and meningococcal septicaemia","year":2008,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Meningococcal meningitis; Meningitis; Antibiotics; Bacterial meningitis; Meningococcal Infections; Medicine; Microbiology; Neisseria meningitidis; Meningococcal disease; Biology; Pediatrics; Bacteria","score_opus":0.03703419702155892,"score_gpt":0.29655400819125827,"score_spread":0.25951981116969935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2597674775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99720883,0.000037632362,0.00002807607,0.0007581679,0.00033793633,0.00057317823,0.0003049477,0.000034509354,0.0007167442],"genre_scores_gemma":[0.99071276,0.001346796,0.00006756363,0.000004173109,0.0001098817,0.0000016409508,0.00013009609,0.00001524864,0.0076118433],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988566,0.00016749837,0.00016840055,0.0003113034,0.000059873488,0.00043629552],"domain_scores_gemma":[0.9989908,0.00038997145,0.0000719956,0.00027817048,0.00020681966,0.0000622763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015887947,0.00017683757,0.0003088093,0.0002042896,0.0009158995,0.000017064029,0.00017097412,0.00024399391,0.00039401161],"category_scores_gemma":[0.000021455406,0.00013042593,0.00014585334,0.00018900707,0.0005273561,0.00010330063,0.00009217837,0.00021734984,0.000020355372],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009783968,0.0026107994,0.028624093,0.00010417102,0.0067181364,0.0006513437,0.003994905,0.000014548709,0.8713836,0.02052316,0.049136616,0.0064546377],"study_design_scores_gemma":[0.008789457,0.010290499,0.07779014,0.000077926576,0.0005706705,0.00021084439,0.0013901473,0.000016915317,0.37791377,0.000055374072,0.5223634,0.0005308259],"about_ca_topic_score_codex":0.0011380389,"about_ca_topic_score_gemma":0.00005628044,"teacher_disagreement_score":0.49346983,"about_ca_system_score_codex":0.00008337966,"about_ca_system_score_gemma":0.000117224845,"threshold_uncertainty_score":0.7044451},"labels":[],"label_agreement":null},{"id":"W2597913867","doi":"10.1016/j.ymeth.2017.03.020","title":"The mouse cortical meninges are the site of immune responses to many different pathogens, and are accessible to intravital imaging","year":2017,"lang":"en","type":"review","venue":"Methods","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health; Wellcome Trust; National Center for Research Resources; Wellcome; Medical Research Council; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation","keywords":"Meninges; Parenchyma; Biology; Immune system; Intravital microscopy; Pathology; Cell biology; Neuroscience; Medicine; Immunology; In vivo","score_opus":0.09150503931646252,"score_gpt":0.43287766999106486,"score_spread":0.34137263067460233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2597913867","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03713554,0.9600315,0.00059673685,0.00041236353,0.0009613313,0.00061425887,0.00020583652,0.000020823278,0.000021597567],"genre_scores_gemma":[0.0016555904,0.9944387,0.0011342446,0.000029485762,0.00011216963,0.00017656018,0.000030849835,0.0000417502,0.0023806395],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963739,0.0024064719,0.000559899,0.0003303749,0.00002034602,0.00030902922],"domain_scores_gemma":[0.9969341,0.001627235,0.0005098099,0.0008077291,0.0000846425,0.000036446396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015069027,0.00032331646,0.0012007833,0.00012043994,0.0008535708,0.0001523252,0.00042138674,0.00020732611,0.00004946459],"category_scores_gemma":[0.0012273663,0.00015358116,0.00024440372,0.00009698411,0.00017091412,0.00004291195,0.0006323414,0.0004456598,0.000025248999],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108764856,0.00003259144,0.0004504584,0.00037443027,0.00023317306,0.0000017431348,0.00016025985,2.63542e-8,0.038594905,0.000079840574,0.00026815606,0.95969564],"study_design_scores_gemma":[0.00013621215,0.000075415184,0.014122216,0.0012917229,0.00047936835,0.00009438336,0.00020539387,2.0410172e-7,0.003670408,0.000017059416,0.9796815,0.00022611208],"about_ca_topic_score_codex":0.00005506132,"about_ca_topic_score_gemma":0.000034153312,"teacher_disagreement_score":0.97941333,"about_ca_system_score_codex":0.000025750142,"about_ca_system_score_gemma":0.000034800345,"threshold_uncertainty_score":0.6565063},"labels":[],"label_agreement":null},{"id":"W2598568956","doi":"","title":"International Pathogenic Neisseria Conference, Banff, Canada","year":2010,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Neisseria; Geography; Microbiology; Biology; Bacteria; Genetics","score_opus":0.008222883322991176,"score_gpt":0.21888999118266447,"score_spread":0.2106671078596733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2598568956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94682986,0.000010564089,0.00002450495,0.00064885075,0.0088984445,0.000040190225,0.000025652644,0.000035092467,0.04348685],"genre_scores_gemma":[0.9862907,0.0000072244197,0.000046989262,0.000104481376,0.00009204842,0.0000062632666,0.000089015906,0.000004188172,0.01335909],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99965805,0.000013657792,0.000103523606,0.000104926185,0.00000482963,0.00011502602],"domain_scores_gemma":[0.99975586,0.000017903141,0.000026790354,0.00011566192,0.00007112941,0.000012630511],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000037234666,0.00006494493,0.000072601324,0.000025759768,0.00007136075,0.000016762919,0.0001172964,0.00008767875,0.03973102],"category_scores_gemma":[0.0000219313,0.000051981562,0.000023031167,0.000034394634,0.000020807036,0.000048698752,0.00003207587,0.00015111682,0.00020719887],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010981422,0.000016973283,0.003339099,4.956738e-7,0.000033723158,2.5360734e-7,0.000006973893,6.816446e-8,0.96809936,0.0078071896,0.018055042,0.002629865],"study_design_scores_gemma":[0.0003338608,0.0000136894405,0.03897791,0.000001048253,0.000005448276,0.0000609469,0.00002809851,0.000002568057,0.045030024,0.000065224755,0.91539806,0.00008309623],"about_ca_topic_score_codex":0.22692251,"about_ca_topic_score_gemma":0.744786,"teacher_disagreement_score":0.9230693,"about_ca_system_score_codex":0.000009831988,"about_ca_system_score_gemma":0.00015058169,"threshold_uncertainty_score":0.9611468},"labels":[],"label_agreement":null},{"id":"W2599007259","doi":"10.1093/jpids/pix013","title":"Four Component Meningococcal Capsular Group B Vaccine in Preterm Infants","year":2017,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"University of Oxford","keywords":"Medicine; Group B; Meningococcal vaccine; Group A; Component (thermodynamics); Neisseria meningitidis; Pediatrics; Virology; Immunology; Internal medicine; Immunization; Antibody; Genetics","score_opus":0.010095765240688528,"score_gpt":0.2426339220961125,"score_spread":0.23253815685542398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2599007259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942872,0.0012751956,0.00003572847,0.0002429771,0.003823443,0.00019596226,0.000026326737,0.00002074159,0.00009243953],"genre_scores_gemma":[0.9981996,0.00082916254,0.000013270638,0.00006286142,0.0007928758,0.000008277902,0.0000033169301,0.000015402182,0.00007526518],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99884266,0.0001696655,0.00050246797,0.00014977081,0.00004651603,0.000288942],"domain_scores_gemma":[0.9983839,0.00009306791,0.00091912673,0.0004203279,0.0001354733,0.00004811324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033686595,0.00018120393,0.00036295975,0.00007486598,0.0007732259,0.00008896546,0.00046792612,0.00018496184,0.00008316593],"category_scores_gemma":[0.00022672047,0.000121191675,0.00061117305,0.00012471758,0.000062359446,0.0002928559,0.00024083641,0.0004976505,0.000011866459],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009386117,0.000306523,0.98226196,0.000026288202,0.00018057515,0.000003213068,0.0001616639,0.000036880927,0.011786742,0.000028982562,0.0047936784,0.00031962202],"study_design_scores_gemma":[0.0040954426,0.0001975326,0.99165744,0.000030812444,0.00036695835,0.00086039456,0.00003830397,0.0000152253,0.00013825299,0.0002769477,0.0021478795,0.00017484344],"about_ca_topic_score_codex":0.00021402292,"about_ca_topic_score_gemma":0.00005974748,"teacher_disagreement_score":0.011648488,"about_ca_system_score_codex":0.00012963556,"about_ca_system_score_gemma":0.00009694482,"threshold_uncertainty_score":0.59471065},"labels":[],"label_agreement":null},{"id":"W2599656354","doi":"","title":"Cost-effectiveness of a procalcitonin test as a prompt indicator of prodomal meningococcal disease in febrile children","year":2014,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Procalcitonin; Medicine; Meningococcal disease; Intensive care medicine; Disease; Test (biology); Neisseria meningitidis; Meningococcal Infections; Pediatrics; Immunology; Internal medicine; Sepsis","score_opus":0.01723278775656839,"score_gpt":0.2901607664953901,"score_spread":0.2729279787388217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2599656354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99743813,0.000018179506,0.000024104333,0.00010860179,0.000055353834,0.0014550631,0.00012812925,0.000033556833,0.00073887384],"genre_scores_gemma":[0.9991855,0.000015730231,0.000019112154,0.0000015363906,0.00002347649,0.000021910357,0.00015053777,0.00001370185,0.0005684686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997931,0.00090597454,0.00023995315,0.00038221557,0.00008684491,0.00045401943],"domain_scores_gemma":[0.9987717,0.00045386385,0.00013892683,0.00029401036,0.00024300706,0.0000984428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010434301,0.00015547044,0.00038039518,0.0005782075,0.00018228892,0.000009069635,0.0003117632,0.00019465182,0.00035825223],"category_scores_gemma":[0.0005616171,0.0001511253,0.000102387436,0.0006169747,0.0004740995,0.00017601268,0.00029539844,0.00045334134,0.00005327888],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018165788,0.0014632698,0.8880082,0.00020745567,0.00014302894,0.00001783772,0.00017272393,0.000010798456,0.102631494,0.004674345,0.00025953422,0.0005947759],"study_design_scores_gemma":[0.0025354796,0.00096063106,0.933532,0.0001993933,0.000029152216,0.000009637237,0.00014184476,0.0000043122645,0.06045439,0.000089507856,0.0018855063,0.0001581473],"about_ca_topic_score_codex":0.0034634916,"about_ca_topic_score_gemma":0.000038136495,"teacher_disagreement_score":0.04552384,"about_ca_system_score_codex":0.000075730815,"about_ca_system_score_gemma":0.00038776573,"threshold_uncertainty_score":0.61627114},"labels":[],"label_agreement":null},{"id":"W2600363044","doi":"10.1097/qco.0000000000000372","title":"Placental transfer of antibody and its relationship to vaccination in pregnancy","year":2017,"lang":"en","type":"review","venue":"Current Opinion in Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Pregnancy; Vaccination; Obstetrics; Antibody; Gynecology; Virology; Immunology","score_opus":0.10920597611248434,"score_gpt":0.41645251519857085,"score_spread":0.3072465390860865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2600363044","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006054752,0.98612976,0.000013577803,0.000006934589,0.0060764547,0.0012444882,0.0003640656,0.000035000696,0.00007497211],"genre_scores_gemma":[0.07679057,0.9219439,3.091616e-7,4.5657853e-7,0.000078012934,0.00026003827,0.0008803243,0.000021050102,0.0000253506],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99845856,0.0002917543,0.00064345787,0.00037002162,0.000021052765,0.00021516473],"domain_scores_gemma":[0.99928075,0.00020338742,0.00019036893,0.0002347789,0.00005503712,0.000035652625],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010032431,0.00029130263,0.0008954552,0.0007350185,0.00012385823,0.00002808356,0.00013482531,0.00029365608,0.00015228782],"category_scores_gemma":[0.00027124744,0.0002669972,0.00017325184,0.00026472294,0.000025672309,0.00018839368,0.000069164984,0.00032477232,0.00005971584],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041422714,0.0010722302,0.09176986,0.024098894,0.000087590255,3.645987e-7,0.00015875061,0.0000031303173,0.000023030556,0.002397304,0.00027946237,0.88006794],"study_design_scores_gemma":[0.0021797959,0.00024313395,0.16946626,0.057585716,0.00024786653,0.000042258314,0.000012047336,0.0000011663357,0.000007383441,0.0001342125,0.7694951,0.00058501697],"about_ca_topic_score_codex":0.000033626875,"about_ca_topic_score_gemma":0.000030845065,"teacher_disagreement_score":0.8794829,"about_ca_system_score_codex":0.00009133528,"about_ca_system_score_gemma":0.00012744367,"threshold_uncertainty_score":0.99997824},"labels":[],"label_agreement":null},{"id":"W2602885200","doi":"10.1016/j.vaccine.2017.02.011","title":"Knowledge, attitudes, beliefs, and behaviors of university students, faculty, and staff during a meningococcal serogroup B outbreak vaccination program","year":2017,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Université Laval; Acadia University; Nova Scotia Health Authority; Institut National de Santé Publique du Québec; Izaak Walton Killam Health Centre; St. Francis Xavier University; BC Children's Hospital; Dalhousie University","funders":"Canadian Institutes of Health Research; Health Canada; Canadian Immunization Research Network; Acadia University; University of Oregon; Public Health Agency of Canada; Princeton University; National Foundation for Infectious Diseases","keywords":"Meningococcal disease; Vaccination; Meningococcal vaccine; Outbreak; Medicine; Family medicine; Nova scotia; Immunization; Public health; Immunology; Neisseria meningitidis; Virology; Nursing","score_opus":0.01767040086093977,"score_gpt":0.3133180105980037,"score_spread":0.2956476097370639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2602885200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987045,0.0004514175,0.0000034587304,0.00008769961,0.0002049258,0.00033912293,0.000042116877,0.00006509848,0.000101659876],"genre_scores_gemma":[0.99827224,0.0002518682,0.00008081875,7.8548396e-7,0.000031683416,0.00000481412,0.000057582107,0.000010068698,0.0012901385],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993311,0.000058900532,0.00016811397,0.00024713497,0.000015723772,0.00017901605],"domain_scores_gemma":[0.9994371,0.000020019668,0.0001693172,0.00024163295,0.00010075389,0.000031179105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014319955,0.0001446658,0.00024907588,0.00010360757,0.00055704784,0.000055112378,0.00018608921,0.00015160472,0.00009157926],"category_scores_gemma":[0.000026261197,0.00013302232,0.00003557309,0.000054379856,0.00002573667,0.00022783938,0.00041057286,0.0001263471,0.000007703308],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023309454,0.00086057576,0.85413164,0.000076693956,0.00017208555,0.000002051701,0.00041360408,1.7618692e-7,0.1241874,0.00014756001,0.00016760052,0.019607529],"study_design_scores_gemma":[0.0035809756,0.00037996806,0.97871786,0.000041229014,0.00009138918,0.000035522,0.00016269225,9.2087004e-7,0.0086005945,0.00000429097,0.008252321,0.00013223478],"about_ca_topic_score_codex":0.00046239208,"about_ca_topic_score_gemma":0.00061989174,"teacher_disagreement_score":0.12458623,"about_ca_system_score_codex":0.000025109559,"about_ca_system_score_gemma":0.000012868777,"threshold_uncertainty_score":0.54244924},"labels":[],"label_agreement":null},{"id":"W2603411688","doi":"10.1128/jb.00751-16","title":"LptO (PG0027) Is Required for Lipid A 1-Phosphatase Activity in Porphyromonas gingivalis W50","year":2017,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Medical Research Council","keywords":"Lipid A; Porphyromonas gingivalis; Bacterial outer membrane; Biology; Mutant; Proteases; Phosphatase; Biochemistry; Alkaline phosphatase; Periplasmic space; Microbiology; Dephosphorylation; Enzyme; Bacteria; Escherichia coli","score_opus":0.031478101594476636,"score_gpt":0.29873176587097183,"score_spread":0.2672536642764952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2603411688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924382,0.00042858583,0.00011709882,0.0024926479,0.0040537617,0.00018261938,0.00013385281,0.000010827347,0.00014241665],"genre_scores_gemma":[0.9984218,0.00020083052,0.00018189412,0.00017271453,0.0004010493,0.000014042855,0.000020841135,0.000017971553,0.0005688778],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987125,0.00015311532,0.0005496505,0.00021191874,0.00001472426,0.00035813372],"domain_scores_gemma":[0.99819064,0.00015751249,0.0010055072,0.00042336565,0.00018271076,0.000040253446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005573853,0.00019027432,0.0006380344,0.00019678906,0.00031192478,0.00005525682,0.00041028173,0.00035574476,0.0005630664],"category_scores_gemma":[0.0003655275,0.00015636702,0.00024643642,0.000045094628,0.00016761673,0.00046008662,0.000113283575,0.0003314298,0.000045841844],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016111823,0.00022043931,0.015011011,0.000019733357,0.00022726336,0.00001150458,0.00016753192,7.321414e-7,0.96210337,0.0003032765,0.0064048716,0.0139191095],"study_design_scores_gemma":[0.0066511612,0.0019769508,0.44554198,0.00011574547,0.0001327453,0.00076766557,0.00005337362,0.000005608261,0.30585974,0.0010338862,0.23749146,0.0003696778],"about_ca_topic_score_codex":0.00035372097,"about_ca_topic_score_gemma":0.00009369981,"teacher_disagreement_score":0.6562436,"about_ca_system_score_codex":0.00006008019,"about_ca_system_score_gemma":0.00010511793,"threshold_uncertainty_score":0.6376462},"labels":[],"label_agreement":null},{"id":"W2604009630","doi":"10.1093/infdis/jix162","title":"Discordant Effects of Licensed Meningococcal Serogroup B Vaccination on Invasive Disease and Nasal Colonization in a Humanized Mouse Model","year":2017,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Meningococcal disease; Vaccination; Virology; Colonization; Humanized mouse; Medicine; Meningococcal vaccine; Neisseria meningitidis; Immunology; Microbiology; Biology; Immunization; Antibody; Bacteria; Immune system","score_opus":0.010114147936344967,"score_gpt":0.25455344916768796,"score_spread":0.244439301231343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604009630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986282,0.0004055324,0.00018748119,0.00011650525,0.0003212285,0.00028834218,0.000018402856,0.000012797387,0.000021506667],"genre_scores_gemma":[0.9993577,0.0004835126,0.00000408516,0.000030261543,0.0000508839,0.000011080308,0.000007528674,0.000012265619,0.000042701482],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99920124,0.00023464419,0.0003110403,0.000092865965,0.00003063535,0.00012955633],"domain_scores_gemma":[0.99865985,0.0003242983,0.0006054699,0.00021151779,0.0001586401,0.000040206633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001771975,0.00013053448,0.0002672413,0.00015405138,0.00036199836,0.000042983516,0.00014829008,0.000051540843,0.00001967771],"category_scores_gemma":[0.000786909,0.00008695338,0.00007526954,0.00005239425,0.000086784195,0.0002577585,0.0000640975,0.00016024582,0.0000024648798],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0051199486,0.0017378951,0.2039272,0.00022869742,0.00042499267,0.000011431487,0.0012779232,0.0016532015,0.7824904,0.0012345525,0.0002779077,0.0016158586],"study_design_scores_gemma":[0.009430386,0.001567539,0.9183506,0.00032155312,0.0005569471,0.000060107555,0.00011606764,0.00035281,0.06758598,0.0014283916,0.000015950793,0.0002136562],"about_ca_topic_score_codex":0.000079880934,"about_ca_topic_score_gemma":0.0001341125,"teacher_disagreement_score":0.7149044,"about_ca_system_score_codex":0.00004560656,"about_ca_system_score_gemma":0.00008330522,"threshold_uncertainty_score":0.3545856},"labels":[],"label_agreement":null},{"id":"W2604770723","doi":"10.1080/14760584.2017.1308828","title":"Emerging experience with meningococcal serogroup B protein vaccines","year":2017,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"GlaxoSmithKline Biologicals; GlaxoSmithKline; Pfizer","keywords":"Meningococcal vaccine; Medicine; Immunogenicity; Meningococcal disease; Herd immunity; Vaccination; Carriage; Clinical trial; Neisseria meningitidis; Virology; Transmission (telecommunications); Licensure; Intensive care medicine; Immunology; Biology; Immunization; Immune system; Computer science; Internal medicine","score_opus":0.0501064178512014,"score_gpt":0.3827172696005463,"score_spread":0.3326108517493449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604770723","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022048762,0.9955223,0.000016751668,0.000113477254,0.001211793,0.0023435357,0.000031330273,0.00012741695,0.00041287843],"genre_scores_gemma":[0.00003635815,0.9956137,0.00023024387,0.000047311765,0.00046301977,0.0017131086,0.00025054414,0.000105516905,0.0015401918],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965722,0.00039793144,0.0015749567,0.00082946994,0.000056001074,0.0005694632],"domain_scores_gemma":[0.99602944,0.00011235786,0.0018646598,0.0016241781,0.00031105604,0.000058282687],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039688477,0.0009801659,0.0043383716,0.00024807977,0.00043943914,0.00005772751,0.0010938353,0.0005003158,0.002064379],"category_scores_gemma":[0.00027463346,0.00059625576,0.00082531944,0.00034896526,0.00009296228,0.00033314002,0.0003188266,0.00048951124,0.00018762882],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029276367,0.00013994417,0.000021959799,0.063574106,0.0005427536,0.0000046547225,0.00016569693,1.103252e-8,0.0010289855,0.000077247525,0.004087654,0.9303277],"study_design_scores_gemma":[0.00036646996,0.00019319802,0.000007917305,0.18119884,0.00038256653,0.00032520748,0.000037018784,3.8990827e-8,0.00040092616,0.000001546185,0.81652814,0.000558146],"about_ca_topic_score_codex":0.00019153659,"about_ca_topic_score_gemma":0.000025000045,"teacher_disagreement_score":0.9297696,"about_ca_system_score_codex":0.00004775564,"about_ca_system_score_gemma":0.00020801075,"threshold_uncertainty_score":0.99964887},"labels":[],"label_agreement":null},{"id":"W2605124784","doi":"10.1093/pch/19.10.523a","title":"Case 4: Recurrent bacterial meningitis in an adolescent female","year":2014,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster Children's Hospital","funders":"","keywords":"Medicine; Meningitis; Lumbar puncture; Photophobia; Pancytopenia; Cefotaxime; Ceftriaxone; Pediatrics; Nausea; Neisseria meningitidis; rhinorrhea; Surgery; Internal medicine; Cerebrospinal fluid; Antibiotics; Bone marrow","score_opus":0.020361072268845985,"score_gpt":0.277541839170016,"score_spread":0.25718076690117003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605124784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932151,0.0011763205,0.00008771553,0.00070698134,0.004130917,0.00030440645,0.000061782615,0.00008199074,0.00023478417],"genre_scores_gemma":[0.9979588,0.0005073885,0.00008468494,0.00024108062,0.000891022,0.000019433584,0.00025046107,0.000019990823,0.000027130056],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99823,0.0004617773,0.00045579034,0.00034521072,0.000018104583,0.0004891363],"domain_scores_gemma":[0.99935496,0.00006295785,0.00017197206,0.0002788377,0.000046425183,0.00008485125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061375386,0.00017752733,0.00032792715,0.00021652062,0.00033641054,0.000030712632,0.00010853234,0.00018247323,0.00032611092],"category_scores_gemma":[0.000068157555,0.00016790324,0.00006333085,0.0002425232,0.000027290831,0.000110778325,0.000059954644,0.00040021582,0.0001464021],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010744901,0.004917461,0.40727985,0.0006326972,0.00010701618,0.00010940939,0.006377268,0.000036330544,0.012524284,0.0067488016,0.021005722,0.53918666],"study_design_scores_gemma":[0.011945368,0.0046332907,0.46081063,0.00023266402,0.000085246604,0.0054955087,0.00051897654,0.00007245543,0.0018499254,0.00024703014,0.5126649,0.0014440105],"about_ca_topic_score_codex":0.0007371972,"about_ca_topic_score_gemma":0.0016612835,"teacher_disagreement_score":0.5377427,"about_ca_system_score_codex":0.00010079178,"about_ca_system_score_gemma":0.00008605792,"threshold_uncertainty_score":0.6846896},"labels":[],"label_agreement":null},{"id":"W2609726614","doi":"10.1016/j.vaccine.2017.03.009","title":"Effect of prophylactic or therapeutic administration of paracetamol on immune response to DTwP-HepB-Hib combination vaccine in Indian infants","year":2017,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Medicine; Diphtheria; Vaccination; Adverse effect; Clinical trial; Immunization; Immunology; Tetanus; Antibody; Internal medicine","score_opus":0.014086667750436061,"score_gpt":0.30653203231619375,"score_spread":0.2924453645657577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2609726614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974239,0.00011739291,0.000005193911,0.00091892394,0.0005776873,0.0008627574,0.000018070901,0.00002039237,0.000055701796],"genre_scores_gemma":[0.9993662,0.00002254215,0.000008458153,0.00001999135,0.000022715145,0.000044158005,0.000033230463,0.000017303842,0.00046538093],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99849087,0.0005063064,0.00052630436,0.00023503772,0.000029705581,0.0002117552],"domain_scores_gemma":[0.9983768,0.0003915464,0.00046562712,0.00064329756,0.00010024249,0.000022527189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009178832,0.00019764964,0.0005088892,0.00035483297,0.00015821068,0.000021243311,0.00024394627,0.00020820134,0.00033637043],"category_scores_gemma":[0.0007759302,0.0001419436,0.00006923644,0.0001962556,0.0000136102435,0.00016294858,0.000059999616,0.00018810698,0.000069236026],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.058261953,0.00045994553,0.0351868,0.000099968885,0.00007723173,0.0000046348637,0.00021169637,0.000004421461,0.8931524,0.00006678271,0.000040054314,0.012434105],"study_design_scores_gemma":[0.0043680076,0.0074971523,0.5304132,0.0000886439,0.000029482602,0.000021166896,0.00001269468,0.0000019530894,0.45709053,0.000014175051,0.0003738669,0.00008911086],"about_ca_topic_score_codex":0.00030077656,"about_ca_topic_score_gemma":0.00023453505,"teacher_disagreement_score":0.49522644,"about_ca_system_score_codex":0.00003775304,"about_ca_system_score_gemma":0.00007253177,"threshold_uncertainty_score":0.5788292},"labels":[],"label_agreement":null},{"id":"W2610271111","doi":"10.1371/journal.pone.0175721","title":"Cost-effectiveness of alternate strategies for childhood immunization against meningococcal disease with monovalent and quadrivalent conjugate vaccines in Canada","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Dalhousie University; University of Manitoba; Sanofi (Canada)","funders":"Canadian Institutes of Health Research; Sanofi Pasteur; GlaxoSmithKline; World Health Organization; Sanofi; Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Vaccination; Meningococcal disease; Meningococcal vaccine; Population; Herd immunity; Pediatrics; Incidence (geometry); Epidemiology; Conjugate vaccine; Immunization; Neisseria meningitidis; Environmental health; Immunology; Internal medicine; Antigen","score_opus":0.03818761545109064,"score_gpt":0.25389089095417244,"score_spread":0.2157032755030818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610271111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837595,0.00031943835,0.00007061902,0.000086483305,0.00011332976,0.00087701145,0.0001107753,0.000010684401,0.00003572722],"genre_scores_gemma":[0.99942833,0.00020753544,0.000037345988,0.0000073709275,0.00001582263,0.00017526018,0.00009673988,0.00001222146,0.00001939411],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99940914,0.000075153606,0.0001745442,0.00016819964,0.000016520167,0.00015643227],"domain_scores_gemma":[0.999379,0.00008094178,0.00016101977,0.00023791204,0.00011877266,0.000022389788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010890622,0.00011961771,0.00027129008,0.000046015797,0.00017807339,0.00003128571,0.00011086932,0.000039081824,0.00001209135],"category_scores_gemma":[0.000050642895,0.00009813569,0.00001737558,0.000025835023,0.000042964788,0.00016012572,0.000049862287,0.00007193513,6.333762e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015609364,0.00086048985,0.5070168,0.0004245691,0.0005722246,0.0000019180036,0.00013749533,0.00014905869,0.48742864,0.0008456434,0.0000065731333,0.000995691],"study_design_scores_gemma":[0.0034734304,0.00017972509,0.89491904,0.00048246005,0.00010412161,0.0000017657202,0.000121922356,0.000077591874,0.10033069,0.00013326721,0.000031874722,0.0001441242],"about_ca_topic_score_codex":0.1447269,"about_ca_topic_score_gemma":0.18364789,"teacher_disagreement_score":0.38790226,"about_ca_system_score_codex":0.000053338463,"about_ca_system_score_gemma":0.00026345407,"threshold_uncertainty_score":0.8609684},"labels":[],"label_agreement":null},{"id":"W2610650275","doi":"10.1139/cjm-2017-0017","title":"Genetic characterization of a <i>Neisseria meningitidis</i> cluster in Queensland, Australia","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Public Health England; European Commission; University of Oxford; Meningitis Research Foundation; Wellcome Trust","keywords":"Multilocus sequence typing; Neisseria meningitidis; Meningococcal disease; Biology; Cluster (spacecraft); Neisseria; Neisseriaceae; Molecular epidemiology; Whole genome sequencing; Virology; Microbiology; Typing; Genotype; Genome; Genetics; Gene; Bacteria; Antibiotics","score_opus":0.01696219318873628,"score_gpt":0.2422879700871246,"score_spread":0.2253257768983883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610650275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971789,0.00018649336,0.000024950124,0.00038302474,0.0019792225,0.00008510541,0.00009762003,0.0000016968851,0.000062995285],"genre_scores_gemma":[0.9993193,0.000029617311,0.000042721,0.000036348312,0.00007961687,0.0000015360945,0.000040434516,0.000008689149,0.00044169623],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99903065,0.000120542696,0.00047267432,0.00010647208,0.0000031765176,0.00026647662],"domain_scores_gemma":[0.99902725,0.000019797002,0.0005413924,0.00021109053,0.00014798855,0.000052471583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019225196,0.00011198206,0.00033285966,0.00027022272,0.00014369955,0.000024245266,0.00028538198,0.00024484503,0.0007065735],"category_scores_gemma":[0.00007599539,0.000098945886,0.000079175516,0.00004284488,0.00018774346,0.000108983906,0.000019180769,0.00019832948,0.00004010153],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053161893,0.000012959785,0.12600887,0.0000074761015,0.00004763875,0.0000070588044,0.00013812013,0.0000015340948,0.872801,0.000046720314,0.0005685847,0.00030686308],"study_design_scores_gemma":[0.0019096776,0.00028222607,0.7949653,0.00010345481,0.00004031912,0.0016629793,0.0000328103,3.4204814e-7,0.13839751,0.000060878145,0.062381193,0.000163276],"about_ca_topic_score_codex":0.00756617,"about_ca_topic_score_gemma":0.040857375,"teacher_disagreement_score":0.7344035,"about_ca_system_score_codex":0.00004795741,"about_ca_system_score_gemma":0.00028868127,"threshold_uncertainty_score":0.9990425},"labels":[],"label_agreement":null},{"id":"W2610868086","doi":"10.1097/inf.0000000000001634","title":"Correction of Cerebrospinal Fluid Protein in Infants With Traumatic Lumbar Punctures","year":2017,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary; Hospital for Sick Children","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences","keywords":"Cerebrospinal fluid; Lumbar puncture; Medicine; Confidence interval; Lumbar; Meningitis; Cohort; Bacterial meningitis; CSF albumin; Cerebrospinal meningitis; Cohort study; Anesthesia; Pediatrics; Internal medicine; Surgery","score_opus":0.008619658803857056,"score_gpt":0.23827109135580213,"score_spread":0.22965143255194506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610868086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961156,0.00040620338,0.000057702015,0.00011546624,0.0022839864,0.0003345324,0.00000905662,0.000025346264,0.00065209344],"genre_scores_gemma":[0.9989403,0.00018872801,0.0000057201473,0.000012616855,0.00045305648,0.000030894447,0.0000029206933,0.000014486305,0.00035126213],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990276,0.00018604095,0.00034955595,0.00013615686,0.000040577965,0.0002600861],"domain_scores_gemma":[0.99890053,0.000047258054,0.00052339776,0.00035226974,0.00012885453,0.00004770094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033885712,0.00016929989,0.00024642222,0.00019027207,0.000950281,0.00009823662,0.00024110037,0.0000971147,0.00037578304],"category_scores_gemma":[0.00032702272,0.00009885252,0.00010654489,0.00012544742,0.00012443858,0.00024218006,0.000048720733,0.00046534353,0.00003430289],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007598682,0.00045983534,0.9767704,0.00006158508,0.0001359576,0.000008740429,0.0002933989,0.00020759349,0.016253889,0.0000698821,0.0015019717,0.003476897],"study_design_scores_gemma":[0.0018969021,0.00037038393,0.99552083,0.00006013796,0.00019946788,0.00047538005,0.00004711556,0.000022569719,0.00065957994,0.0003938438,0.00020620474,0.00014756998],"about_ca_topic_score_codex":0.0003653354,"about_ca_topic_score_gemma":0.0002641335,"teacher_disagreement_score":0.018750463,"about_ca_system_score_codex":0.000048137405,"about_ca_system_score_gemma":0.00019030376,"threshold_uncertainty_score":0.7308889},"labels":[],"label_agreement":null},{"id":"W2613139729","doi":"10.1155/2017/8705860","title":"Spontaneous Nosocomial<i>Pseudomonas aeruginosa</i>Meningitis Presenting as Trismus","year":2017,"lang":"en","type":"article","venue":"Case Reports in Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Trismus; Meningitis; Metronidazole; Surgery; Anesthesia; Antibiotics","score_opus":0.011267851907462288,"score_gpt":0.26863861338648626,"score_spread":0.257370761479024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2613139729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98297167,0.00081536156,0.00000770327,0.00006132881,0.004461313,0.00048866315,0.000035970308,0.0002620205,0.010895985],"genre_scores_gemma":[0.9979901,0.000105566236,0.000005906876,0.000027804415,0.00028915834,0.00014547072,0.000059780836,0.00003662351,0.0013395932],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9981378,0.00014290679,0.00062688097,0.000557597,0.00003312461,0.0005016927],"domain_scores_gemma":[0.9979999,0.00019110304,0.0006128913,0.0010011953,0.00011446902,0.00008041834],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019989068,0.0003018482,0.00046114385,0.00020762719,0.0013689952,0.0002546719,0.00011663326,0.00026445286,0.0009790247],"category_scores_gemma":[0.0011983453,0.00029637836,0.00022537805,0.00009403699,0.00022752189,0.0003373245,0.00021983105,0.0003047216,0.0001356082],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016385998,0.00085697783,0.4138229,0.00007500606,0.00031240226,0.5439209,0.00028561737,0.000039300165,0.026523186,0.0004118018,0.0033421202,0.010245971],"study_design_scores_gemma":[0.0016277429,0.00015640902,0.04073149,0.000090294736,0.00018018874,0.9207091,0.000099282894,0.0000027384767,0.0066283806,0.0012762463,0.02799734,0.0005008241],"about_ca_topic_score_codex":0.0044536656,"about_ca_topic_score_gemma":0.0007684308,"teacher_disagreement_score":0.37678817,"about_ca_system_score_codex":0.000102362625,"about_ca_system_score_gemma":0.0001371059,"threshold_uncertainty_score":0.99994886},"labels":[],"label_agreement":null},{"id":"W2615014412","doi":"","title":"Immunogenicity and Safety of a DTaP-IPV//PRP~T Combination Vaccine Given with Hepatitis B Vaccine: A Randomized Open-Label trial/Immunogenicite et Innocuite D'une Combinaison Vaccinale DTaP-IPV//PRP~T, Administree Avec le Vaccin Contre L'hepatite C: Essai Randomise ouvert/Inmonogenicidad Y Seguridad De Una Combinacion Vacunal DTaP-IPV//PRP~T Admnistrada Con la Vacuna Anti-Hepatitis B: Ensayo Aleatorizado Al Descubierto","year":2008,"lang":"fr","type":"article","venue":"Bulletin of the World Health Organization","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Reactogenicity; Medicine; Tetanus; Diphtheria; Toxoid; Vaccination; Whooping cough; Immunogenicity; Virology; Immunology; Hepatitis B; Inactivated Poliovirus Vaccine; Pertussis vaccine; Immunization; Antigen","score_opus":0.010436986823931156,"score_gpt":0.2581968815848558,"score_spread":0.24775989476092466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615014412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92181474,0.009097008,0.0019207633,0.05473044,0.0019673412,0.009347936,0.00070172705,0.0001905435,0.00022952768],"genre_scores_gemma":[0.95987874,0.027847603,0.0009910385,0.0014814478,0.00014183077,0.00029445853,0.001598583,0.00031020388,0.0074560647],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9823663,0.0094254855,0.0045989063,0.001611503,0.00043738738,0.0015604066],"domain_scores_gemma":[0.98760724,0.0028979473,0.0051851734,0.0017289303,0.0021905205,0.0003902015],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0050082803,0.0016416853,0.005008591,0.0007100992,0.0023696893,0.00027006914,0.0015751456,0.0010937995,0.0017328628],"category_scores_gemma":[0.0014584996,0.0014827519,0.0005720136,0.0028594306,0.0005832301,0.0006309927,0.0009601706,0.0016470245,0.000049018832],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.6711269,0.015853412,0.16364837,0.0023320871,0.007009692,0.000107316635,0.0073793693,0.00020048782,0.042172715,0.019524187,0.06688461,0.0037608442],"study_design_scores_gemma":[0.8078808,0.005466128,0.11089257,0.003350336,0.0018847408,0.0019137202,0.0003389952,0.0003586468,0.030837657,0.00064814213,0.03451872,0.0019095312],"about_ca_topic_score_codex":0.062377837,"about_ca_topic_score_gemma":0.014417503,"teacher_disagreement_score":0.13675389,"about_ca_system_score_codex":0.00087034807,"about_ca_system_score_gemma":0.0028144652,"threshold_uncertainty_score":0.999633},"labels":[],"label_agreement":null},{"id":"W2615302290","doi":"10.1001/jamapediatrics.2017.0638","title":"The Influence of Maternally Derived Antibody and Infant Age at Vaccination on Infant Vaccine Responses","year":2017,"lang":"en","type":"review","venue":"JAMA Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Children's Hospital","funders":"National Institute for Health and Care Research","keywords":"Medicine; Vaccination; Immunogenicity; Antibody; Immunization; Booster dose; Tetanus; Immunology; Poliomyelitis; Seroconversion; Antigen; Pediatrics","score_opus":0.030146810484294663,"score_gpt":0.3387609471127332,"score_spread":0.3086141366284385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615302290","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.395175,0.60346055,8.773984e-7,0.00004132274,0.00067563826,0.00040511892,0.00014855467,0.000024580597,0.00006833873],"genre_scores_gemma":[0.012728527,0.98529947,0.000007903759,0.00001612623,0.0002244947,0.00004619229,0.0002191163,0.000032623066,0.001425576],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981214,0.0003994831,0.00078308024,0.00035642443,0.000040648345,0.0002989912],"domain_scores_gemma":[0.99669576,0.0011088701,0.0012663483,0.0007095971,0.00019050608,0.000028906992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000627623,0.00038132753,0.0010632181,0.00030454292,0.000639278,0.00013412899,0.00045673846,0.00067122775,0.00005178797],"category_scores_gemma":[0.0011469598,0.00023430651,0.00020687295,0.00015717254,0.00005735262,0.00014559102,0.00038414652,0.0004686127,0.00008910563],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014159324,0.00022501253,0.014782042,0.009283654,0.000758881,0.000041202624,0.0002231666,0.0000036369104,0.011728256,0.0005940458,0.004434181,0.95651],"study_design_scores_gemma":[0.0006100616,0.0002133372,0.1173559,0.00065942196,0.00046953617,0.00013480971,0.0000028461395,9.424333e-8,0.00012732272,0.000015576714,0.88016707,0.00024404917],"about_ca_topic_score_codex":0.0002501762,"about_ca_topic_score_gemma":0.00011589752,"teacher_disagreement_score":0.9562659,"about_ca_system_score_codex":0.000060402555,"about_ca_system_score_gemma":0.00014916951,"threshold_uncertainty_score":0.95547426},"labels":[],"label_agreement":null},{"id":"W2615397917","doi":"10.2223/jped.1491","title":"Acellular pertussis vaccine for adolescents","year":2006,"lang":"en","type":"review","venue":"Jornal de Pediatria","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Filamentous haemagglutinin adhesin; Pertactin; Bordetella pertussis; Diphtheria; Vaccination; Whooping cough; Pediatrics; Population; Immunity; Herd immunity; Immunology; Pertussis vaccine; Immunization; Tetanus; Pertussis toxin; Environmental health; Internal medicine; Antigen; Immune system","score_opus":0.02756263537208747,"score_gpt":0.30510128939083897,"score_spread":0.2775386540187515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615397917","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027279413,0.99470615,0.00019806094,0.00002770761,0.0033996073,0.0008316213,0.00037963997,0.000086706896,0.0000977161],"genre_scores_gemma":[0.000098936216,0.9905638,0.000089001594,0.000018697796,0.0026497804,0.00017989225,0.0010779798,0.0000731634,0.005248715],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981829,0.00019926882,0.0006981946,0.00039516197,0.000015340573,0.00050914777],"domain_scores_gemma":[0.9989886,0.00015417747,0.00042199474,0.00031544795,0.00008152517,0.000038221166],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002804958,0.00043980568,0.0013871694,0.00023616134,0.00021584245,0.000043186858,0.00027341774,0.00097181456,0.00044202787],"category_scores_gemma":[0.00009349042,0.00033642192,0.000978172,0.00017719378,0.000015275531,0.000053936277,0.00007650499,0.00046389375,0.0005638824],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001974861,0.00046906597,0.00072622893,0.017787965,0.0007071124,0.000005900511,0.000017557171,7.2098527e-7,0.0006681177,0.00016193434,0.2792691,0.69998884],"study_design_scores_gemma":[0.0010519433,0.000095878975,0.00010699523,0.0010272729,0.002000173,0.00013206182,0.0000015739045,3.653903e-7,0.000016582571,0.00003374513,0.9951827,0.0003506908],"about_ca_topic_score_codex":0.000100423415,"about_ca_topic_score_gemma":0.00002255643,"teacher_disagreement_score":0.7159136,"about_ca_system_score_codex":0.00011484029,"about_ca_system_score_gemma":0.00023424503,"threshold_uncertainty_score":0.9999088},"labels":[],"label_agreement":null},{"id":"W2615567079","doi":"","title":"The Impact of Adolescent Pertussis Immunization, 2004-2009: Lessons from Australia/L'impact De la Vaccination Contre la Coqueluche Chez Les Adolescents, 2004-2009: Les Lecons Donnees Par l'Australie/ Estudio En Centros De Atencion Al Paciente Para El Diagnostico De Sarampion: Deteccion De Anticuerpos IgM Y Acido Nucleico Viral Especificos del Sarampion","year":2011,"lang":"es","type":"article","venue":"Bulletin of the World Health Organization","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Diphtheria; Immunization; Vaccination; Tetanus; Booster dose; Cohort; Pediatrics; Pertussis vaccine; Booster (rocketry); Whooping cough; Incidence (geometry); Immunology; Internal medicine; Antigen","score_opus":0.018539080957232737,"score_gpt":0.30421754470996487,"score_spread":0.28567846375273215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615567079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98395663,0.0035619678,0.0028957732,0.00705396,0.00047373507,0.0012913024,0.0006482621,0.0001035553,0.00001479018],"genre_scores_gemma":[0.9889145,0.009756585,0.00028369104,0.00017366903,0.00019612082,0.000024843455,0.00031675457,0.00010463438,0.00022923316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9927369,0.004238236,0.0012760294,0.000532442,0.00013733061,0.001079075],"domain_scores_gemma":[0.9959975,0.00089772383,0.0015811522,0.0006915292,0.00063431397,0.00019778346],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016671114,0.00064706674,0.0007953891,0.00027696558,0.001516201,0.0001547806,0.00066931173,0.0007900656,0.0011665076],"category_scores_gemma":[0.001424984,0.00045480247,0.00037538027,0.00075610145,0.00044069174,0.0001271302,0.00019702081,0.00096760003,0.000035973313],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089215336,0.001659128,0.87529945,0.00018055395,0.0004269492,0.0000020717866,0.0025074226,0.0009802413,0.09639416,0.0006919238,0.018585443,0.0023804866],"study_design_scores_gemma":[0.002331442,0.00034230534,0.9336796,0.0012030116,0.00031473264,0.00008302901,0.0005243529,0.00012232478,0.055860467,0.00011752362,0.005023422,0.00039778824],"about_ca_topic_score_codex":0.022825051,"about_ca_topic_score_gemma":0.0009979728,"teacher_disagreement_score":0.058380134,"about_ca_system_score_codex":0.001463841,"about_ca_system_score_gemma":0.0010067227,"threshold_uncertainty_score":0.9997904},"labels":[],"label_agreement":null},{"id":"W2615999950","doi":"10.1007/s40262-017-0548-y","title":"Penetration of Vancomycin into the Cerebrospinal Fluid: A Systematic Review","year":2017,"lang":"en","type":"review","venue":"Clinical Pharmacokinetics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of Alberta; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Vancomycin; Ventriculitis; Medicine; Cerebrospinal fluid; Penetration (warfare); Meningitis; Internal medicine; Surgery; Staphylococcus aureus; Bacteria","score_opus":0.1640465031503143,"score_gpt":0.4801198568830462,"score_spread":0.31607335373273193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615999950","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000013156279,0.9929895,0.000018135252,0.000098769495,0.004262048,0.0022288775,0.000038660757,0.000029765422,0.00032109063],"genre_scores_gemma":[0.000098139404,0.9977176,0.000019284627,0.00013668784,0.00034082518,0.00019640123,0.000170959,0.000034782563,0.0012852853],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99517274,0.0015198999,0.0026914624,0.00036142793,0.000034385965,0.00022005608],"domain_scores_gemma":[0.9953596,0.001037108,0.002231648,0.0011346749,0.00020385446,0.000033138003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017423142,0.00039064686,0.0035014239,0.00006274944,0.00024226084,0.000030810173,0.00092488714,0.00050639064,0.0005809431],"category_scores_gemma":[0.001324478,0.00021700242,0.001113792,0.00013378079,0.00030870258,0.000050971274,0.0002138962,0.0008315951,0.0005362014],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009873303,0.0001571482,0.0000036389554,0.7634586,0.0008593392,7.547405e-7,0.000010843131,4.6427328e-8,0.000050570117,0.00008562325,0.015011491,0.22035207],"study_design_scores_gemma":[0.00027244186,0.00013627272,0.0000062114973,0.22182693,0.0071505005,0.00004021878,0.0000015283302,4.3075835e-7,0.000010633962,0.000016293463,0.7703633,0.00017527872],"about_ca_topic_score_codex":0.000022474835,"about_ca_topic_score_gemma":0.0000068502823,"teacher_disagreement_score":0.7553518,"about_ca_system_score_codex":0.000025461988,"about_ca_system_score_gemma":0.00018516739,"threshold_uncertainty_score":0.88491017},"labels":[],"label_agreement":null},{"id":"W2618612854","doi":"10.1128/cvi.00121-17","title":"Breadth and Duration of Meningococcal Serum Bactericidal Activity in Health Care Workers and Microbiologists Immunized with the MenB-FHbp Vaccine","year":2017,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Clinical and Translational Science Institute, University of California, San Francisco; National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Center for Advancing Translational Sciences; University of California, San Francisco; National Institutes of Health","keywords":"Titer; Outbreak; Biology; Meningococcal disease; Microbiology; Virology; Neisseria meningitidis; Antibody; Antibody titer; Medicine; Immunology; Bacteria","score_opus":0.019836823604025566,"score_gpt":0.31710815493475547,"score_spread":0.2972713313307299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2618612854","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988015,0.0038411808,0.000018027164,0.007268344,0.00038635955,0.00038841896,0.000027740154,0.000023719598,0.000031224474],"genre_scores_gemma":[0.99747485,0.0021339883,0.000061768835,0.00008276427,0.00004375663,0.000020687234,0.000030868876,0.0000135422015,0.00013779514],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99799544,0.0006052638,0.0006321095,0.00041784652,0.000010519661,0.0003387996],"domain_scores_gemma":[0.9983719,0.00040850602,0.0006102126,0.00049342477,0.00008426974,0.000031692267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007003541,0.0002473508,0.00078141084,0.000081090846,0.0005881787,0.00004404758,0.00021140749,0.00032836,0.000043839373],"category_scores_gemma":[0.00015630783,0.00015113142,0.000053727326,0.00007092871,0.00046230014,0.0001633205,0.00036564455,0.00055076106,0.0000028286383],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040332163,0.00018339766,0.72758037,0.00006664902,0.00035601892,0.000001657623,0.00055183424,2.823169e-7,0.20701738,0.00013085458,0.00019810752,0.0598802],"study_design_scores_gemma":[0.006517879,0.0015259004,0.9835747,0.000071721275,0.000042055442,0.00014795529,0.0004701162,0.0000023863854,0.00322522,0.000021060509,0.004234892,0.00016610455],"about_ca_topic_score_codex":0.0020258017,"about_ca_topic_score_gemma":0.0021352654,"teacher_disagreement_score":0.25599432,"about_ca_system_score_codex":0.000016084676,"about_ca_system_score_gemma":0.00006753896,"threshold_uncertainty_score":0.616296},"labels":[],"label_agreement":null},{"id":"W2620587549","doi":"10.1186/s12889-017-4468-4","title":"Epidemiology of pertussis in Alberta, Canada 2004–2015","year":2017,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta; Ministry of Health; University of Calgary","funders":"Canadian Institutes of Health Research; Canadian Immunization Research Network; Alberta Health","keywords":"Medicine; Epidemiology; Vaccination; Outbreak; Incidence (geometry); Biostatistics; Population; Public health; Demography; Whooping cough; Pediatrics; Environmental health; Immunology; Virology; Internal medicine","score_opus":0.06539025399538512,"score_gpt":0.33582941706762814,"score_spread":0.270439163072243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2620587549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95181066,0.0017406179,0.00008358979,0.042438865,0.0022141507,0.00020837011,0.000040968596,0.000013686118,0.001449094],"genre_scores_gemma":[0.9966482,0.000070194175,0.00006714349,0.00051258254,0.000047061374,0.000014869353,0.000048698243,0.0000072107164,0.0025840206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99834764,0.00047093327,0.0004889645,0.00019869162,0.000008964961,0.00048482997],"domain_scores_gemma":[0.998603,0.00040410899,0.00036990264,0.0005034448,0.00005798158,0.0000615497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010953277,0.000101376965,0.00044744625,0.00008675256,0.00027186703,0.0000045123534,0.00025776846,0.00015174536,0.00043720735],"category_scores_gemma":[0.0020082125,0.0000833892,0.000043776115,0.00005553515,0.000091441696,0.00011934332,0.000070127186,0.00016319976,0.000026412403],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014748172,0.00006878619,0.9685416,0.000031584026,0.000020313639,1.4597084e-7,0.00006643988,0.0000010524584,0.00015356264,0.0039121257,0.024184627,0.0030049898],"study_design_scores_gemma":[0.00047580848,0.000054605083,0.75470304,0.000011623247,0.0000013877865,0.000013121817,0.00003775028,0.0000040798313,0.0000395006,0.000058766753,0.24453865,0.00006165616],"about_ca_topic_score_codex":0.97900605,"about_ca_topic_score_gemma":0.9916095,"teacher_disagreement_score":0.22035402,"about_ca_system_score_codex":0.00016275243,"about_ca_system_score_gemma":0.0027191052,"threshold_uncertainty_score":0.4823576},"labels":[],"label_agreement":null},{"id":"W2621581718","doi":"10.18433/j3493f","title":"Association Between Vancomycin Blood Brain Barrier Penetration and Clinical Response in Postsurgical Meningitis","year":2017,"lang":"en","type":"article","venue":"Journal of Pharmacy & Pharmaceutical Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Faculty of Medicine and Dentistry, University of Alberta","keywords":"Cmin; Cerebrospinal fluid; Medicine; Meningitis; rhinorrhea; Internal medicine; Pharmacokinetics; Immunology; Gastroenterology; Cmax; Surgery","score_opus":0.07701023001611002,"score_gpt":0.4367764264542213,"score_spread":0.3597661964381113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2621581718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879029,0.0006639412,0.000014235456,0.0097439345,0.0013162395,0.0000970063,0.00001103244,0.00000851504,0.0002422454],"genre_scores_gemma":[0.9986613,0.00059304526,0.00007730802,0.00013519831,0.00033019762,0.0000014061771,0.00000115327,0.000004849307,0.00019556044],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977333,0.00096309994,0.00072483474,0.00020385481,0.00007247599,0.00030241735],"domain_scores_gemma":[0.9974481,0.0016503861,0.0005910037,0.00008775477,0.00012049396,0.0001022667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0066186753,0.0001214158,0.00033190232,0.00015285901,0.00055624684,0.0001838962,0.00032328616,0.00012599774,0.00064901845],"category_scores_gemma":[0.0020704386,0.000093709765,0.0001179479,0.000110080255,0.00033391156,0.0007024658,0.00010000927,0.00059064187,0.00001632951],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072485633,0.00012160424,0.74823314,0.0000031710194,0.00012637976,0.00000950999,0.000047827794,0.0000010861643,0.23385376,0.000037303515,0.00056760706,0.016273731],"study_design_scores_gemma":[0.0061834105,0.0006295399,0.82058054,0.000036973204,0.00022791742,0.00018675845,0.00003100333,0.000052242805,0.044899832,0.00010858939,0.12691157,0.00015160306],"about_ca_topic_score_codex":0.00006091775,"about_ca_topic_score_gemma":0.000019946403,"teacher_disagreement_score":0.18895392,"about_ca_system_score_codex":0.000047695023,"about_ca_system_score_gemma":0.00013711081,"threshold_uncertainty_score":0.7106297},"labels":[],"label_agreement":null},{"id":"W2623238422","doi":"10.1542/peds.2017-0476","title":"The Epidemiology, Management, and Outcomes of Bacterial Meningitis in Infants","year":2017,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":202,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Stollery Children's Hospital; University of Alberta; BC Children's Hospital; University of British Columbia; University of Toronto; Montreal Children's Hospital; Western University; McGill University; University of Ottawa; Children's Hospital of Eastern Ontario; Université de Montréal; Hospital for Sick Children; SickKids Foundation; London Health Sciences Centre; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Epidemiology; Bacterial meningitis; Meningitis; Intensive care medicine; Pediatrics; Internal medicine","score_opus":0.024978369629555523,"score_gpt":0.29993264907972805,"score_spread":0.27495427945017253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2623238422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995727,0.0009992265,0.000006949844,0.00032330558,0.0018073019,0.0000948578,0.000018584162,0.0000088158495,0.0010139712],"genre_scores_gemma":[0.9962308,0.002874253,0.0000611124,0.000009425957,0.00006867893,0.000009911382,0.0000091751335,0.0000042497913,0.0007324115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99939966,0.00008206114,0.00023734143,0.00010978121,0.000005021693,0.00016614843],"domain_scores_gemma":[0.999131,0.0003834198,0.00019835167,0.00026132734,0.000017863787,0.000008039286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004459795,0.000070126174,0.00019320482,0.000054884575,0.00030571443,0.000016988219,0.00016209921,0.00009871433,0.000049186143],"category_scores_gemma":[0.00051894796,0.00004642492,0.000030424217,0.000028377795,0.00012588713,0.00006799634,0.00017136498,0.00008506639,0.000013507677],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037849153,0.000016802704,0.98615485,0.000008741721,0.000033036526,3.859466e-7,0.000032761312,1.2302462e-7,0.0009756753,0.002291744,0.0012156036,0.009232401],"study_design_scores_gemma":[0.0006828636,0.000026990554,0.97621864,0.000002454788,0.000025118368,0.000004274777,0.000022100987,4.1869612e-7,0.00016246086,0.00067371223,0.02212919,0.000051776195],"about_ca_topic_score_codex":0.0002786473,"about_ca_topic_score_gemma":0.00018464052,"teacher_disagreement_score":0.020913584,"about_ca_system_score_codex":0.0000050886074,"about_ca_system_score_gemma":0.0000061793007,"threshold_uncertainty_score":0.2351339},"labels":[],"label_agreement":null},{"id":"W2677202271","doi":"10.1093/jtm/taw094","title":"Bordetella pertussis infections in travelers: data from the GeoSentinel global network","year":2016,"lang":"en","type":"article","venue":"Journal of Travel Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency; Public Health Agency of Canada; Centers for Disease Control and Prevention; International Society of Travel Medicine","keywords":"Medicine; Bordetella pertussis; Pediatrics; Pertussis vaccine; Whooping cough; Vaccination; Immunization; Travel medicine; Vaccine-preventable diseases; Immunology; Measles","score_opus":0.04271693349891822,"score_gpt":0.29719136058730505,"score_spread":0.25447442708838686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2677202271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9639699,0.0048929197,0.0020992095,0.022563685,0.005575762,0.00011476231,0.00011622014,0.00001189849,0.0006556733],"genre_scores_gemma":[0.99638367,0.0013289538,0.000046656067,0.00026578645,0.0016677576,0.0000013468763,0.00002677315,0.000007727114,0.00027131638],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99883616,0.0001592759,0.0005827959,0.00015127962,0.000033876222,0.00023663371],"domain_scores_gemma":[0.99871475,0.0004940629,0.0002882789,0.00036994118,0.00010131884,0.000031677784],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00065178727,0.00013152903,0.00035175684,0.000054595625,0.000111352056,0.000009160624,0.00042048152,0.0001329824,0.0016878521],"category_scores_gemma":[0.0004087381,0.000057066994,0.00006508453,0.00024178288,0.00016015366,0.00015043418,0.000072730654,0.00024204724,0.000043985507],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061899103,0.00045881406,0.38410223,0.000007838283,0.0009425159,0.00002044653,0.00046905823,0.000010202969,0.22792456,0.00050152227,0.30038023,0.084563605],"study_design_scores_gemma":[0.0047408724,0.00040813,0.85184205,0.00044818973,0.00020413926,0.000612934,0.00036822906,0.0000049741484,0.00034348195,0.0007746621,0.14013076,0.000121591795],"about_ca_topic_score_codex":0.0009510632,"about_ca_topic_score_gemma":0.0009918412,"teacher_disagreement_score":0.46773982,"about_ca_system_score_codex":0.000043095468,"about_ca_system_score_gemma":0.00007688358,"threshold_uncertainty_score":0.9992247},"labels":[],"label_agreement":null},{"id":"W2726796824","doi":"10.1016/j.vaccine.2017.06.001","title":"The changing epidemiology of invasive Haemophilus influenzae disease: Emergence and global presence of serotype a strains that may require a new vaccine for control","year":2017,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University; Public Health Agency of Canada","funders":"Public Health Agency; Wellcome Trust","keywords":"Multilocus sequence typing; Haemophilus influenzae; Epidemiology; Serotype; Conjugate vaccine; Disease; Case fatality rate; Biology; Molecular epidemiology; Virology; Meningitis; Medicine; Immunology; Microbiology; Genotype; Genetics; Pediatrics; Immunization; Antibiotics; Pathology; Antibody","score_opus":0.04665831382513649,"score_gpt":0.32353740174205514,"score_spread":0.2768790879169187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2726796824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9830418,0.008599255,0.0010816484,0.005202508,0.0009399762,0.0007546353,0.00033207337,0.000022166729,0.000025917987],"genre_scores_gemma":[0.99838376,0.0008421879,0.00006930365,0.00007731859,0.00011906651,0.000030398058,0.000020252088,0.000009935739,0.00044777914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878484,0.00013216506,0.00043013546,0.00026706365,0.00001482862,0.00037098496],"domain_scores_gemma":[0.9980209,0.0005584825,0.00060734514,0.00059717963,0.00016001872,0.00005610199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048382778,0.00017821287,0.0005008081,0.0000510119,0.00052436773,0.000009775142,0.00036311086,0.00014296673,0.00009507362],"category_scores_gemma":[0.0021969865,0.00012048086,0.00010827136,0.00007750376,0.0000646323,0.00019397645,0.0001791053,0.00009087888,0.000003593453],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021857885,0.000067103596,0.9344851,0.00015368446,0.00044618145,0.0000010369085,0.0001617342,0.000028730316,0.03892539,0.011696624,0.0033477524,0.008500918],"study_design_scores_gemma":[0.0045546126,0.0004560211,0.97748697,0.0001456126,0.00017010568,0.00002801671,0.00012551279,0.000048082384,0.004519666,0.0046709618,0.0076201884,0.00017428097],"about_ca_topic_score_codex":0.00066031044,"about_ca_topic_score_gemma":0.0007020994,"teacher_disagreement_score":0.043001886,"about_ca_system_score_codex":0.000011122997,"about_ca_system_score_gemma":0.00010001095,"threshold_uncertainty_score":0.4913067},"labels":[],"label_agreement":null},{"id":"W2735429567","doi":"10.1186/s12913-017-2321-1","title":"How well do ICD-9 physician claim diagnostic codes identify confirmed pertussis cases in Alberta, Canada? A Canadian Immunization Research Network (CIRN) Study","year":2017,"lang":"en","type":"article","venue":"BMC Health Services Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; Hospital for Sick Children; University of Toronto; University of Calgary; Institute for Clinical Evaluative Sciences; Provincial Laboratory of Public Health; University of Alberta; University of Manitoba; Ministry of Health","funders":"Canadian Institutes of Health Research; Canadian Immunization Research Network","keywords":"Medicine; Bordetella pertussis; Whooping cough; Public health; Diagnosis code; Pediatrics; Public health surveillance; Pertussis vaccine; Vaccination; Family medicine; Immunization; Immunology; Pathology; Population; Environmental health","score_opus":0.05911279611846248,"score_gpt":0.39879570320808033,"score_spread":0.33968290708961785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735429567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99041,0.001881051,0.0000012282525,0.0037056706,0.0010205938,0.0020528315,0.00008131414,0.000018977622,0.0008283783],"genre_scores_gemma":[0.9958735,0.00059680233,0.00000595775,0.00023627364,0.0003195968,0.0003368862,0.0002498794,0.000043573684,0.0023375067],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99243885,0.0038598084,0.0005090979,0.00067731284,0.00021103915,0.0023038622],"domain_scores_gemma":[0.99370456,0.003587145,0.00020002283,0.001340425,0.0008734107,0.00029444107],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.004059775,0.00026060865,0.00055451604,0.0006148388,0.0060843304,0.0008122719,0.0011778616,0.00028322963,0.000307925],"category_scores_gemma":[0.0007844043,0.00024353628,0.000050318264,0.00082648406,0.00025422973,0.00038426367,0.00046129347,0.0012330409,0.00019441794],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023613087,0.0004435545,0.9876604,0.0004589432,0.00011240475,0.00004599753,0.0025663401,0.000033556084,0.0004191811,0.00041852775,0.0050062733,0.0025986948],"study_design_scores_gemma":[0.0012240286,0.0004777413,0.92002445,0.00038406497,0.000008744802,0.00001569458,0.013209253,0.000051249015,0.00009340761,0.000070588976,0.064218044,0.00022269909],"about_ca_topic_score_codex":0.9992856,"about_ca_topic_score_gemma":0.99994665,"teacher_disagreement_score":0.067635916,"about_ca_system_score_codex":0.0009655014,"about_ca_system_score_gemma":0.0055663735,"threshold_uncertainty_score":0.99520963},"labels":[],"label_agreement":null},{"id":"W2740033617","doi":"10.1016/j.vaccine.2017.07.068","title":"Adverse events following live-attenuated intranasal influenza vaccination of children with cystic fibrosis: Results from two influenza seasons","year":2017,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Montreal Children's Hospital; University of British Columbia Hospital; McGill University Health Centre; Université de Montréal; Child and Family Research Institute; McGill University","funders":"Ministère de la Santé et des Services sociaux; GlaxoSmithKline; Pfizer","keywords":"Nasal administration; Cystic fibrosis; Vaccination; Medicine; Adverse effect; Immunology; Virology; Live attenuated influenza vaccine; Influenza vaccine; Internal medicine","score_opus":0.014293903201714503,"score_gpt":0.2729678218029545,"score_spread":0.25867391860124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2740033617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977213,0.0003352503,0.00006802025,0.00018604968,0.00069054996,0.00038879085,0.00044256714,0.00009619205,0.00007125547],"genre_scores_gemma":[0.99893934,0.000021502477,0.00021225997,0.000055646364,0.00013172574,0.000012052955,0.00047875103,0.000030631967,0.00011810494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986027,0.00013195912,0.00048504077,0.00041565704,0.000039677772,0.0003249757],"domain_scores_gemma":[0.9982815,0.00011948205,0.0005801946,0.00080605655,0.0001695339,0.000043246302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022282684,0.00027764824,0.0004640946,0.00014230469,0.0005217069,0.000024826526,0.00037809147,0.00021359506,0.00031137248],"category_scores_gemma":[0.00028878657,0.00022571077,0.00013770675,0.00012997439,0.000015074256,0.00045989858,0.00013742999,0.0002462436,0.00015501751],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029687227,0.00019129482,0.8209317,0.0000109939265,0.0012843233,0.000002408077,0.00035542736,0.00019408768,0.17082363,0.00003325186,0.00064991467,0.0025542518],"study_design_scores_gemma":[0.015522459,0.0003409066,0.95932984,0.00018388318,0.0003658602,0.000013668929,0.000051650968,0.00001938124,0.022743745,0.00005015637,0.0011116426,0.00026679592],"about_ca_topic_score_codex":0.004594038,"about_ca_topic_score_gemma":0.0009117239,"teacher_disagreement_score":0.14807989,"about_ca_system_score_codex":0.00003893834,"about_ca_system_score_gemma":0.000060456252,"threshold_uncertainty_score":0.92042184},"labels":[],"label_agreement":null},{"id":"W2743794466","doi":"10.1038/s41598-017-07938-7","title":"CD71+ erythroid suppressor cells impair adaptive immunity against Bordetella pertussis","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"Canadian Institutes of Health Research; Women and Children's Health Research Institute; Children's Health Research Institute","keywords":"Immunology; Bordetella pertussis; Immunity; Immune system; Biology; Acquired immune system; Transferrin receptor; Antigen; Vaccination; Antibody; Transferrin","score_opus":0.018909111747468465,"score_gpt":0.2560520541583161,"score_spread":0.23714294241084766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2743794466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96140146,0.00037448984,0.000019731962,0.0001758384,0.03044944,0.00027676648,0.000028582395,0.00011005033,0.007163618],"genre_scores_gemma":[0.9810412,0.00003057686,0.000062958265,0.0000199311,0.000095978634,0.000022958078,0.00011441675,0.000018987022,0.018592974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982172,0.00013458641,0.00046506713,0.00066785637,0.000042154086,0.00047310462],"domain_scores_gemma":[0.9969253,0.00004945231,0.0005594564,0.0021521864,0.00026028347,0.000053299424],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00093726144,0.00022519394,0.00032099895,0.00013363434,0.0032431192,0.00050950935,0.0003758538,0.00023594273,0.0012883954],"category_scores_gemma":[0.00022450884,0.00018393269,0.00020400768,0.00010287277,0.0007047183,0.0003754709,0.00033397367,0.0002766771,0.000440974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003506154,0.0001439081,0.0020863193,0.000007091481,0.00008243286,0.000032429438,0.0002465621,0.0000040580635,0.9544552,0.000023902294,0.04020478,0.0026782607],"study_design_scores_gemma":[0.00031276298,0.0000757176,0.013326002,0.000026572623,0.000036810572,0.00022173402,0.00016084516,0.0000068364275,0.6804369,0.00040420037,0.3047282,0.0002633656],"about_ca_topic_score_codex":0.00053996395,"about_ca_topic_score_gemma":0.0001511105,"teacher_disagreement_score":0.27401826,"about_ca_system_score_codex":0.0000414859,"about_ca_system_score_gemma":0.00013366013,"threshold_uncertainty_score":0.99962455},"labels":[],"label_agreement":null},{"id":"W2744835610","doi":"10.4049/jimmunol.1700742","title":"Erythroid Suppressor Cells Compromise Neonatal Immune Response against <i>Bordetella pertussis</i>","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Bordetella pertussis; Immune system; Suppressor; Compromise; Immunology; Biology; Microbiology; Bacteria; Genetics; Political science","score_opus":0.012217193092192857,"score_gpt":0.24435295963098147,"score_spread":0.23213576653878862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744835610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818125,0.008637614,0.000053909425,0.0036061492,0.0054077357,0.000152637,0.00002849327,0.00002251598,0.0002784682],"genre_scores_gemma":[0.9957657,0.0020224475,0.00005874285,0.000111039,0.00015874475,0.000003163867,0.000006386834,0.000026157544,0.0018476231],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977285,0.000971525,0.0007090298,0.00014486432,0.000030273843,0.0004157878],"domain_scores_gemma":[0.99704206,0.0005682445,0.001128379,0.0009813023,0.00025403575,0.000025993277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013789567,0.00024410753,0.00056095375,0.0001425052,0.0012340501,0.00007234505,0.0012859497,0.00030913093,0.00057317264],"category_scores_gemma":[0.0003709995,0.0001532521,0.000255912,0.000051929168,0.00075649127,0.0002678862,0.0003534041,0.00081427745,0.00029003026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007983891,0.00011670183,0.00008324829,0.000004356236,0.00050695287,0.000012901959,0.00052112347,0.0000119324095,0.98301953,0.000040137576,0.00242838,0.0052708513],"study_design_scores_gemma":[0.0039306707,0.0009548295,0.029150827,0.00005818902,0.00014295339,0.0021652044,0.00046340996,0.000003094808,0.7867385,0.00009152908,0.17608005,0.00022074555],"about_ca_topic_score_codex":0.00011131186,"about_ca_topic_score_gemma":0.0000136023655,"teacher_disagreement_score":0.19628102,"about_ca_system_score_codex":0.000044662604,"about_ca_system_score_gemma":0.00014156217,"threshold_uncertainty_score":0.94914407},"labels":[],"label_agreement":null},{"id":"W2746482228","doi":"10.1016/j.jgar.2017.08.005","title":"β-Lactam resistance among Haemophilus influenzae isolates in Poland","year":2017,"lang":"en","type":"article","venue":"Journal of Global Antimicrobial Resistance","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Health, British Columbia","keywords":"Haemophilus influenzae; Ampicillin; Microbiology; Penicillin binding proteins; Cefuroxime; Amoxicillin; Broth microdilution; Clavulanic acid; Biology; Minimum inhibitory concentration; Cephalosporin; Antibiotics; Amp resistance; Antibiotic resistance; Ceftriaxone; Penicillin","score_opus":0.010864129778804115,"score_gpt":0.2622800858522362,"score_spread":0.2514159560734321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2746482228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99081445,0.0018095744,0.000026697544,0.0015044037,0.0020376665,0.000114227274,0.000073900665,0.000015665788,0.003603433],"genre_scores_gemma":[0.99732095,0.00030629587,0.00018451328,0.000094412404,0.0001848271,0.0000011903618,0.000003249795,0.000012651141,0.0018918891],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99844635,0.00011383967,0.0007576029,0.0002318951,0.00003370428,0.00041662806],"domain_scores_gemma":[0.99810165,0.000049444443,0.001096123,0.00043105477,0.00027310432,0.00004860557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038126775,0.00023253036,0.000551283,0.000087949586,0.00050227717,0.00018933653,0.0006380259,0.00027002985,0.00008361344],"category_scores_gemma":[0.00036830467,0.00019861423,0.0001964428,0.00014255552,0.00031318385,0.0006588675,0.0001117136,0.00040018305,0.00004407643],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034512857,0.00029670395,0.360044,0.00008485006,0.00021330408,0.00007652629,0.00008177816,0.000010190219,0.5858809,0.0011951105,0.048262194,0.00040319952],"study_design_scores_gemma":[0.003025628,0.00008532691,0.8956083,0.00068759994,0.00004809273,0.00015617647,0.000022710163,2.8898674e-7,0.013788505,0.0007053483,0.08558698,0.00028504105],"about_ca_topic_score_codex":0.0002929574,"about_ca_topic_score_gemma":0.0089281425,"teacher_disagreement_score":0.57209235,"about_ca_system_score_codex":0.00017441128,"about_ca_system_score_gemma":0.00013810273,"threshold_uncertainty_score":0.8099253},"labels":[],"label_agreement":null},{"id":"W2746876509","doi":"10.12688/f1000research.11654.1","title":"The relationship between mucosal immunity, nasopharyngeal carriage, asymptomatic transmission and the resurgence of Bordetella pertussis","year":2017,"lang":"en","type":"preprint","venue":"F1000Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bordetella pertussis; Whooping cough; Immunity; Herd immunity; Transmission (telecommunications); Immunology; Carriage; Biology; Virology; Medicine; Vaccination; Immune system; Genetics; Pathology","score_opus":0.07304743791225611,"score_gpt":0.36062116836832414,"score_spread":0.28757373045606804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2746876509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9751633,0.016138094,0.000048693302,0.004942761,0.00086338207,0.0009630427,0.00014118731,0.00004365545,0.0016959058],"genre_scores_gemma":[0.99278814,0.0034796973,0.00002091579,0.000004178356,0.00013429433,0.000110820336,0.00014682936,0.000026777632,0.0032883745],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99649674,0.0021517007,0.0005480388,0.00032267915,0.00008982283,0.00039099692],"domain_scores_gemma":[0.9908851,0.0072855623,0.00030622134,0.0012390286,0.0002410419,0.00004307684],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.003366115,0.00023913245,0.0005036748,0.00014303434,0.0023833949,0.00018395594,0.0011353628,0.00054904923,0.0001775404],"category_scores_gemma":[0.0019551245,0.00012829283,0.00020482746,0.00010850498,0.0014771856,0.00007087668,0.001192981,0.0017354699,0.00003961628],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043656286,0.0003095144,0.71903366,0.0018439174,0.0026739808,0.00000580666,0.006834961,0.000017216904,0.039681703,0.017594574,0.01983908,0.18779998],"study_design_scores_gemma":[0.002098201,0.00012917005,0.9528763,0.00040971005,0.00020424703,0.000022808848,0.00018495099,0.000045364694,0.004016416,0.011042441,0.028705876,0.0002644566],"about_ca_topic_score_codex":0.0028216585,"about_ca_topic_score_gemma":0.00009414857,"teacher_disagreement_score":0.23384272,"about_ca_system_score_codex":0.00002990402,"about_ca_system_score_gemma":0.00029122163,"threshold_uncertainty_score":0.9989154},"labels":[],"label_agreement":null},{"id":"W2749711714","doi":"10.4269/ajtmh.17-0375","title":"Clinical Spectrum, Etiology, and Outcome of Neurological Disorders in the Rural Hospital of Mosango, the Democratic Republic of Congo","year":2017,"lang":"en","type":"article","venue":"American Journal of Tropical Medicine and Hygiene","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Etiology; Medicine; Pediatrics; Meningoencephalitis; Case fatality rate; Meningitis; Epidemiology; Epilepsy; African trypanosomiasis; Internal medicine; Psychiatry; Trypanosomiasis; Pathology","score_opus":0.02063538159791922,"score_gpt":0.31747131228169656,"score_spread":0.29683593068377734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2749711714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9760989,0.0005009886,0.00002801238,0.022894789,0.00033252107,0.00008518329,0.000002755249,0.0000013451994,0.00005553042],"genre_scores_gemma":[0.998709,0.0009938742,0.000034009965,0.00016583994,0.000086850116,0.0000012997193,6.450305e-7,0.0000029944486,0.0000054768952],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985679,0.0003917872,0.0007931408,0.000089327914,0.000031104726,0.00012674408],"domain_scores_gemma":[0.9979258,0.0008009408,0.00095341954,0.0002319117,0.00006436386,0.000023517348],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00052965083,0.000090825866,0.00066698005,0.00006692482,0.000083959734,0.0000045605825,0.00028146835,0.00007016788,0.000037277714],"category_scores_gemma":[0.0012581954,0.00003980869,0.00009244665,0.000070332644,0.0033470565,0.000052007203,0.000068741705,0.00036633664,1.7316052e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025747487,0.00015063658,0.98073894,0.000007982061,0.00007965266,0.0000013233322,0.00020265441,2.6807678e-7,0.0020590227,0.000983289,0.00015472705,0.015364004],"study_design_scores_gemma":[0.0014317506,0.009586637,0.9867858,0.00002985473,0.00008241003,0.00011184009,0.000779148,0.0000026055604,0.000048115686,0.00061227015,0.00049141014,0.00003812537],"about_ca_topic_score_codex":0.00031807894,"about_ca_topic_score_gemma":0.00006660127,"teacher_disagreement_score":0.02272895,"about_ca_system_score_codex":0.000001909436,"about_ca_system_score_gemma":0.000017163404,"threshold_uncertainty_score":0.99936527},"labels":[],"label_agreement":null},{"id":"W2751697067","doi":"","title":"カナダにおけるシプロフロキサシン耐性Neisseria meningitidis(髄膜炎菌) 輸入された系統の可能性","year":2017,"lang":"ja","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Microbiology; Biology; Virology; Chemistry; Bacteria; Genetics","score_opus":0.01735028043733468,"score_gpt":0.2435157611526998,"score_spread":0.2261654807153651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2751697067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95922005,0.011567516,0.000015212607,0.0039063664,0.021881483,0.00020084466,0.0005208983,0.000011018818,0.0026765862],"genre_scores_gemma":[0.99327695,0.00054459565,0.00009215982,0.00022134237,0.0011344973,0.000002782471,0.000055461638,0.000053021566,0.0046191765],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99679476,0.00043726093,0.0011516634,0.00040382796,0.00001223504,0.0012002579],"domain_scores_gemma":[0.9960022,0.000121754194,0.0018126175,0.0009675086,0.00063478213,0.0004611346],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00079975877,0.000501295,0.0011225605,0.00062446104,0.0022892512,0.00033469952,0.0015748383,0.0011751787,0.008501791],"category_scores_gemma":[0.00061838434,0.00045998048,0.0004612909,0.00009180211,0.0012173052,0.0004062897,0.00011907347,0.0011331773,0.0010328302],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019911924,0.000059382466,0.010063612,0.000031126787,0.00095598755,0.00016896917,0.0004780913,0.0000022669399,0.92987984,0.0006380882,0.05564234,0.0018811993],"study_design_scores_gemma":[0.0033115142,0.0012772358,0.029913973,0.0003283736,0.00043051626,0.010534302,0.0003761485,4.8783676e-7,0.06243721,0.0001793686,0.8905287,0.0006822011],"about_ca_topic_score_codex":0.013794546,"about_ca_topic_score_gemma":0.04914897,"teacher_disagreement_score":0.8674426,"about_ca_system_score_codex":0.00025097537,"about_ca_system_score_gemma":0.0023882561,"threshold_uncertainty_score":0.9997852},"labels":[],"label_agreement":null},{"id":"W2752566204","doi":"10.1093/ofid/ofx163.757","title":"Persistence of Bactericidal Activity at 4 Years After 2 Primary Doses of a Recombinant, 4-Component, Meningococcal Serogroup B Vaccine (4CMenB) and Response to a Booster Dose in Adolescents and Young Adults","year":2017,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Sanofi Pasteur; Novavax; Sanofi; GlaxoSmithKline; Pfizer","keywords":"Medicine; Booster dose; Meningococcal vaccine; Vaccination; Titer; Group B; Meningococcal disease; Persistence (discontinuity); Pediatrics; Immunology; Neisseria meningitidis; Internal medicine; Antigen; Antibody; Immunization; Biology","score_opus":0.010076332618904105,"score_gpt":0.2501282993574245,"score_spread":0.24005196673852036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752566204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99829876,0.00028429137,0.0000010551661,0.00011537838,0.0004165725,0.00068123284,0.00009752668,0.000014364302,0.000090816044],"genre_scores_gemma":[0.9995855,0.00007536876,0.00000764159,0.000040146308,0.000007825561,0.000094374984,0.000013084518,0.000016218202,0.00015981475],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998854,0.00022255396,0.00027150512,0.00035651977,0.00002369067,0.00027177387],"domain_scores_gemma":[0.99918973,0.000057776328,0.00024863164,0.00038640964,0.00005333924,0.00006409424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019476662,0.00019164922,0.0004526761,0.00014936496,0.00022797818,0.00007909156,0.00020685577,0.00011452944,0.000082179184],"category_scores_gemma":[0.000109320914,0.0001777168,0.00006822556,0.00007021845,0.00012046128,0.0004404912,0.0010198527,0.00010019673,0.0000077325485],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017669497,0.000506038,0.77100843,0.00007815786,0.000056160752,0.000004538399,0.0003454075,1.3642781e-7,0.20542935,0.0000022530864,0.00006807438,0.004831941],"study_design_scores_gemma":[0.004764364,0.0008343689,0.99000573,0.00043562372,0.000054715547,0.000067168396,0.00009397825,0.0000011335027,0.00320811,0.000011711131,0.0003350453,0.00018804496],"about_ca_topic_score_codex":0.0020657382,"about_ca_topic_score_gemma":0.001785253,"teacher_disagreement_score":0.21899728,"about_ca_system_score_codex":0.00006588618,"about_ca_system_score_gemma":0.000035803576,"threshold_uncertainty_score":0.7247081},"labels":[],"label_agreement":null},{"id":"W2753261787","doi":"","title":"Characterisation of proteins secreted in the outer membrane vesicles of Bacteroides fragilis","year":2017,"lang":"en","type":"dissertation","venue":"ERA","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Queen's University Belfast","keywords":"Bacteroides fragilis; Bacterial outer membrane; Vesicle; Microbiology; Membrane protein; Secretory protein; Chemistry; Biology; Cell biology; Membrane; Biochemistry; Secretion; Escherichia coli; Antibiotics; Gene","score_opus":0.014752422602575359,"score_gpt":0.26051197755338495,"score_spread":0.2457595549508096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753261787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703825,0.00024130815,9.3190965e-7,0.000092525035,0.0009963529,0.00038903422,0.00007833844,0.000009717319,0.0011535428],"genre_scores_gemma":[0.99532855,0.000097813194,0.000008905577,0.000008938987,0.000079941114,0.000058469708,0.0021386954,0.000012681756,0.0022660336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920595,0.0001481906,0.00036734933,0.00014715012,0.000018067898,0.00011327111],"domain_scores_gemma":[0.9989805,0.000054893575,0.0005208863,0.00034158764,0.000098023615,0.0000041125895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020121844,0.0001438879,0.00034256995,0.00012872521,0.00008156139,0.000016431706,0.00022361946,0.0003530268,0.0006381421],"category_scores_gemma":[0.00007369619,0.0001011053,0.000092311275,0.000052673433,0.000042699965,0.00010704273,0.000009782709,0.00026246993,0.000020359186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019555939,0.00006587468,0.0011090214,0.00014264252,0.000076065364,3.7163142e-7,0.002768683,8.7475435e-8,0.9873365,0.00007668939,0.00010117122,0.008127288],"study_design_scores_gemma":[0.0004413911,0.00010601958,0.43237773,0.00019595594,0.00004159496,0.000004865612,0.00033480188,2.759213e-7,0.5591786,0.000049731367,0.0071699107,0.00009911404],"about_ca_topic_score_codex":0.0008935034,"about_ca_topic_score_gemma":0.00061742234,"teacher_disagreement_score":0.4312687,"about_ca_system_score_codex":0.000008368539,"about_ca_system_score_gemma":0.000045832392,"threshold_uncertainty_score":0.6987209},"labels":[],"label_agreement":null},{"id":"W2753328444","doi":"10.1016/j.str.2017.07.016","title":"Cryoelectron Microscopy Reconstructions of the Pseudomonas aeruginosa and Neisseria gonorrhoeae Type IV Pili at Sub-nanometer Resolution","year":2017,"lang":"en","type":"article","venue":"Structure","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of Allergy and Infectious Diseases; British Columbia Knowledge Development Fund; National Center for Research Resources; National Institute of General Medical Sciences; Western Economic Diversification Canada; Canadian Institutes of Health Research; National Institutes of Health; Simon Fraser University; Agence Nationale de la Recherche; Fondation pour la Recherche Médicale; Canada Foundation for Innovation","keywords":"Pilus; Pilin; Neisseria gonorrhoeae; Fimbriae Proteins; Protein filament; Biophysics; Biology; Helix (gastropod); Neisseria; Pseudomonas aeruginosa; Microbiology; Crystallography; Chemistry; Escherichia coli; Bacteria; Biochemistry; Genetics","score_opus":0.008882843007667363,"score_gpt":0.24055442365250718,"score_spread":0.2316715806448398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753328444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952063,0.00075349485,0.000004035464,0.0002638336,0.0032313697,0.00015601887,0.000094514035,0.000018405588,0.00027205827],"genre_scores_gemma":[0.9986046,0.00011727557,0.000076088654,0.000017137958,0.000076344,0.0000031372078,0.000031185737,0.0000103020975,0.0010639532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934655,0.00006755927,0.00017113,0.00020877959,0.0000057766533,0.00020022714],"domain_scores_gemma":[0.99917835,0.000018053383,0.00020788002,0.00051007513,0.00007130728,0.00001434243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004627271,0.00013676981,0.00018934604,0.000042912114,0.0009406342,0.000035205052,0.00018076035,0.00022762266,0.00051844143],"category_scores_gemma":[0.0000575591,0.00009470224,0.000060967264,0.00006324592,0.0003177877,0.000107689426,0.00014291012,0.0001953772,0.000013717828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011969731,0.000007199581,0.030190399,0.000009656996,0.00005547857,2.6836776e-8,0.000054845656,6.947163e-7,0.9666534,0.0002808371,0.0011925537,0.0014352292],"study_design_scores_gemma":[0.0006058729,0.00011396551,0.41646922,0.000021203512,0.0000638911,0.00023473361,0.000023131312,0.000001687754,0.5487484,0.00076164823,0.032819055,0.00013723892],"about_ca_topic_score_codex":0.000159793,"about_ca_topic_score_gemma":0.0006214186,"teacher_disagreement_score":0.417905,"about_ca_system_score_codex":0.000033061675,"about_ca_system_score_gemma":0.000037424306,"threshold_uncertainty_score":0.7234693},"labels":[],"label_agreement":null},{"id":"W2753894971","doi":"10.1097/inf.0000000000001752","title":"Potential Impact of Changes in the Schedule for Primary Diphtheria-Tetanus Toxoids-Pertussis Immunization as Control Strategy for Pertussis","year":2017,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Advancing Health Outcomes","funders":"Vlaamse regering; Universiteit Antwerpen; Consejo Nacional de Investigaciones Científicas y Técnicas; Pfizer","keywords":"Medicine; Vaccination; Vaccination schedule; Incidence (geometry); Immunization; Pediatrics; Diphtheria; Pertussis vaccine; Whooping cough; Immunology","score_opus":0.012592216996642907,"score_gpt":0.2825174641779224,"score_spread":0.26992524718127947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753894971","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99417484,0.0014654294,0.0011316122,0.0008533475,0.0011371261,0.0008782799,0.00023862271,0.000018233171,0.00010253076],"genre_scores_gemma":[0.9976784,0.0008070035,0.00000780166,0.000076382814,0.0011219339,0.00015081937,0.000040067018,0.000023110035,0.000094480216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987981,0.00030050028,0.0003552832,0.00015378481,0.00003938574,0.0003529981],"domain_scores_gemma":[0.99833333,0.00035973417,0.0005841095,0.00041699462,0.0002626727,0.00004314539],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0007544668,0.00020381153,0.0003137698,0.00015901822,0.0015985298,0.00020053601,0.0004301612,0.00014300282,0.00022850069],"category_scores_gemma":[0.0005647033,0.00010893179,0.00040699518,0.00010075546,0.00010112863,0.00021691633,0.00004092362,0.00025914007,0.00000769911],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010585443,0.0031935505,0.83279943,0.0003065545,0.0024593975,0.000013090856,0.0012904957,0.0031883526,0.11311792,0.0010414253,0.004536199,0.027468143],"study_design_scores_gemma":[0.00880873,0.0018623527,0.98331624,0.000022067656,0.0014723069,0.00044778717,0.00022930183,0.00016871946,0.000259792,0.002600868,0.00050312444,0.0003087231],"about_ca_topic_score_codex":0.00028803982,"about_ca_topic_score_gemma":0.00006905591,"teacher_disagreement_score":0.1505168,"about_ca_system_score_codex":0.00008199829,"about_ca_system_score_gemma":0.0003358803,"threshold_uncertainty_score":0.99970126},"labels":[],"label_agreement":null},{"id":"W2754053894","doi":"10.1186/s12889-017-4714-9","title":"Modelling the effects of booster dose vaccination schedules and recommendations for public health immunization programs: the case of Haemophilus influenzae serotype b","year":2017,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Booster (rocketry); Medicine; Booster dose; Vaccination; Hib vaccine; Vaccination schedule; Immunization; Herd immunity; Conjugate vaccine; Carriage; Population; Pediatrics; Incidence (geometry); Haemophilus influenzae; Immunology; Environmental health; Antibiotics; Antibody","score_opus":0.09649970028231833,"score_gpt":0.3480089929322374,"score_spread":0.25150929264991906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754053894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93709534,0.0021241459,0.017406393,0.040553875,0.000724081,0.0019925141,0.000045387587,0.000035818954,0.000022439293],"genre_scores_gemma":[0.9980017,0.0004897477,0.0008500562,0.00022952732,0.000046622303,0.00016101514,0.00016465927,0.000014090763,0.00004257591],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99842036,0.0005747434,0.0004962045,0.00017573788,0.000016931535,0.00031604583],"domain_scores_gemma":[0.9978457,0.00039828764,0.0008119211,0.00056115334,0.0003395514,0.000043365555],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0018702217,0.0001220304,0.00026613122,0.00011376342,0.0017508867,0.00013121773,0.00022341829,0.00011392288,0.000012373876],"category_scores_gemma":[0.0005529189,0.00007652505,0.00005746485,0.0001318836,0.000105482664,0.00040627847,0.00010971483,0.00015529284,0.0000014990538],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023938128,0.0013533845,0.02714894,0.003244475,0.00051546446,4.4705942e-7,0.0097987745,0.00013045028,0.0014269163,0.15181622,0.002384699,0.80194086],"study_design_scores_gemma":[0.03524658,0.015315071,0.31444812,0.0017814868,0.0003610179,0.0018977895,0.015459696,0.03957381,0.004255208,0.014191556,0.5553852,0.0020845279],"about_ca_topic_score_codex":0.0030224128,"about_ca_topic_score_gemma":0.0012149945,"teacher_disagreement_score":0.7998563,"about_ca_system_score_codex":0.000054185246,"about_ca_system_score_gemma":0.00048419664,"threshold_uncertainty_score":0.9995487},"labels":[],"label_agreement":null},{"id":"W2756437412","doi":"10.1128/iai.00373-17","title":"Hyperbiofilm Formation by Bordetella pertussis Strains Correlates with Enhanced Virulence Traits","year":2017,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Agencia Nacional de Promoción Científica y Tecnológica; Ministerio de Ciencia, Tecnología e Innovación Productiva; Consejo Nacional de Investigaciones Científicas y Técnicas; International Union of Biochemistry and Molecular Biology","keywords":"Biofilm; Bordetella pertussis; Microbiology; Biology; Colonization; Virulence; Pathogen; Obligate; Human pathogen; Whooping cough; Bacteria; Bordetella; Virology; Vaccination; Gene; Genetics","score_opus":0.012903745248483436,"score_gpt":0.24362347186899327,"score_spread":0.23071972662050982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2756437412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468344,0.00021124855,0.0009242949,0.00011814634,0.0004554293,0.00013792608,0.000028875917,0.000078330864,0.0033623183],"genre_scores_gemma":[0.9984215,0.0006591218,0.000013190098,0.000036635043,0.00002008948,0.000017216396,0.00006033248,0.000008587275,0.00076331815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99943894,0.000087481116,0.00015367917,0.00013845434,0.000011795115,0.0001696469],"domain_scores_gemma":[0.99948245,0.000030727457,0.00015811365,0.00022778813,0.00007971515,0.000021217766],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00011794245,0.00013934785,0.00015632508,0.000050226095,0.0014706689,0.0001201446,0.0000863756,0.00017049436,0.00036286988],"category_scores_gemma":[0.000064934655,0.00010810864,0.000035682566,0.00004261939,0.00017542318,0.00055940286,0.00004259327,0.0002486926,0.00006859537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006701611,0.00009235668,0.004069264,0.000012446555,0.000049514896,8.817842e-8,0.00026495548,7.3270974e-7,0.95349085,0.00008972562,0.00044791622,0.04141512],"study_design_scores_gemma":[0.0017092177,0.0006227046,0.47128138,0.000062731415,0.00005454728,0.00013645398,0.0001655624,0.000018101768,0.5013846,0.000054765573,0.024218962,0.00029093216],"about_ca_topic_score_codex":0.0012996118,"about_ca_topic_score_gemma":0.00034511613,"teacher_disagreement_score":0.46721214,"about_ca_system_score_codex":0.000018314846,"about_ca_system_score_gemma":0.000015967773,"threshold_uncertainty_score":0.9998293},"labels":[],"label_agreement":null},{"id":"W2760811122","doi":"10.1093/ofid/ofx180.002","title":"Possible Impact of Wide-scale Vaccination Against Serogroup B Neisseria Meningitidis on Gonorrhea Incidence Rates in One Region of Quebec, Canada","year":2017,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Jewish General Hospital; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Centre intégré de santé et de services sociaux de Chaudière-Appalaches; Centre Intégré de Santé et de Services Sociaux des Laurentides; Université Laval; Centre intégré universitaire de santé et de services sociaux de l'Est-de-l'Île-de-Montréal; Institut National de Santé Publique du Québec","funders":"","keywords":"Medicine; Vaccination; Neisseria meningitidis; Incidence (geometry); Poisson regression; Demography; Gonorrhea; Meningococcal vaccine; Immunology; Environmental health; Population; Immunization; Antibody; Human immunodeficiency virus (HIV)","score_opus":0.014939509989804643,"score_gpt":0.28156840326199095,"score_spread":0.2666288932721863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760811122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99638,0.00020022718,0.0000075760345,0.00019478996,0.0004331403,0.00046790153,0.00011072805,0.00001859266,0.0021870749],"genre_scores_gemma":[0.9992078,0.0001007919,0.0000027329825,0.000032937187,0.00001370099,0.00005099279,0.00015826072,0.000016964681,0.0004158207],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989317,0.00011463852,0.0003899819,0.00025929997,0.000022665796,0.0002816985],"domain_scores_gemma":[0.9986365,0.000118896765,0.0005345313,0.00051319867,0.00015505962,0.000041828353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009823345,0.0001926379,0.00043724055,0.000134146,0.00037730174,0.00010130773,0.00038633164,0.000118403965,0.0003069846],"category_scores_gemma":[0.00023779225,0.0001734714,0.0001124007,0.00013858911,0.00006184704,0.00063625263,0.0002074783,0.00011644494,0.000007946468],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042372145,0.0004947072,0.9679199,0.00003235641,0.00012612261,0.0000016811222,0.000046870493,0.00013892178,0.024125956,0.00026718702,0.002095841,0.0043267403],"study_design_scores_gemma":[0.0014815878,0.00041202782,0.9726353,0.00018596766,0.00003755271,0.0000075681437,0.000082642044,0.000007353692,0.024445387,0.00035110238,0.00017321375,0.00018025849],"about_ca_topic_score_codex":0.8559453,"about_ca_topic_score_gemma":0.92373437,"teacher_disagreement_score":0.06778905,"about_ca_system_score_codex":0.00025781116,"about_ca_system_score_gemma":0.00052078627,"threshold_uncertainty_score":0.70739585},"labels":[],"label_agreement":null},{"id":"W2761870438","doi":"10.1016/j.vaccine.2017.09.057","title":"Haemophilus influenzae type b carriage and burden of its related diseases in Chinese children: Systematic review and meta-analysis","year":2017,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Carriage; Hib vaccine; Medicine; Pediatrics; Meta-analysis; Haemophilus influenzae; Disease burden; Meningitis; Disease; Immunization; Immunology; Internal medicine; Conjugate vaccine; Biology; Antibiotics; Microbiology","score_opus":0.048365390679512926,"score_gpt":0.3398475447920115,"score_spread":0.29148215411249856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761870438","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016245709,0.9959013,6.8853986e-8,0.00005261342,0.00011812658,0.0018853133,0.00037463818,0.000023812187,0.000019553021],"genre_scores_gemma":[0.0034453694,0.995123,0.0000016553669,0.000015532658,0.00002020317,0.00008128804,0.00047395055,0.000027816297,0.00081115816],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.997468,0.0005803542,0.0012962156,0.0004422312,0.000019681442,0.00019354114],"domain_scores_gemma":[0.99770284,0.0001775268,0.001147597,0.0008231685,0.00011250419,0.00003636432],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038413203,0.0004930417,0.008805438,0.00050021266,0.00010858343,0.000026817595,0.0002597496,0.00039306495,0.00059217674],"category_scores_gemma":[0.0006001838,0.00028698583,0.0008820239,0.0006302291,0.000021791697,0.00010441159,0.00019534191,0.00029154186,0.00003775511],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016697873,0.000083711355,0.00072147883,0.7763706,0.2210336,0.000005270624,0.00004339934,9.650765e-7,0.0000127165595,0.000041036106,0.00016460747,0.0015059157],"study_design_scores_gemma":[0.0004923338,0.00007873515,0.0015701851,0.02066552,0.96030706,0.0002070945,0.0000016606892,3.1704053e-7,6.418804e-7,0.000009347609,0.01629603,0.00037108656],"about_ca_topic_score_codex":0.00028670463,"about_ca_topic_score_gemma":0.0000560912,"teacher_disagreement_score":0.75570506,"about_ca_system_score_codex":0.000015608866,"about_ca_system_score_gemma":0.000046343528,"threshold_uncertainty_score":0.9999582},"labels":[],"label_agreement":null},{"id":"W2762237659","doi":"10.1093/pch/9.suppl_a.55ab","title":"118 Invasive Disease Caused by Haemophilus Influenzae Species in 12 Impact Centers, 1996–2001","year":2004,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; University of British Columbia; University of Saskatchewan; University of Calgary","funders":"","keywords":"Haemophilus influenzae; Medicine; Serotype; Pneumonia; Meningitis; Pediatrics; Retrospective cohort study; Disease; Haemophilus; Internal medicine; Immunology; Antibiotics; Biology; Bacteria; Microbiology","score_opus":0.016474989772502387,"score_gpt":0.26787847965323014,"score_spread":0.25140348988072775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2762237659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98167604,0.010035185,0.000022011765,0.005204443,0.0013808595,0.00056711264,0.0007682608,0.000102299884,0.00024377822],"genre_scores_gemma":[0.9902954,0.0067611225,0.000015501437,0.0015899235,0.00034851895,0.00002269588,0.000801866,0.000031698895,0.00013324917],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99798954,0.00018535898,0.000550061,0.00040274925,0.00003761153,0.00083468197],"domain_scores_gemma":[0.9990575,0.000106214415,0.00024385008,0.00034045056,0.000049656854,0.0002023701],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028604802,0.0002993555,0.00045126956,0.00034056383,0.00037019313,0.00003438363,0.00019662024,0.00019745287,0.00030120864],"category_scores_gemma":[0.00018281992,0.0002639755,0.00016272962,0.00045466892,0.000074079755,0.00017800443,0.00009175528,0.00051153696,0.000221623],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032435526,0.0010316566,0.943666,0.00012290268,0.00011291473,0.000013554217,0.00089117506,0.00013701442,0.003942252,0.0004669778,0.0485073,0.0007838977],"study_design_scores_gemma":[0.0041433224,0.00031336548,0.9588132,0.000068984315,0.00003084582,0.000023579089,0.00007578986,3.8559529e-7,0.00036296848,0.000307897,0.03553732,0.00032235286],"about_ca_topic_score_codex":0.0061723036,"about_ca_topic_score_gemma":0.0026184372,"teacher_disagreement_score":0.015147187,"about_ca_system_score_codex":0.00051623804,"about_ca_system_score_gemma":0.0006267703,"threshold_uncertainty_score":0.9999812},"labels":[],"label_agreement":null},{"id":"W2762829457","doi":"10.1093/pch/19.6.e35-160","title":"164: The Health Burden of Invasive Meningococcal Disease: A Systematic Review","year":2014,"lang":"en","type":"review","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Incidence (geometry); MEDLINE; Quality of life (healthcare); Systematic review; Depression (economics); Disease; Pediatrics; Odds ratio; Case fatality rate; Epidemiology; Psychiatry; Internal medicine","score_opus":0.024244469949909014,"score_gpt":0.31764457317724176,"score_spread":0.29340010322733273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2762829457","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000013297232,0.9887517,0.00002826752,0.0034550184,0.0013688228,0.005846322,0.00041457906,0.00006797445,0.00006597651],"genre_scores_gemma":[0.00002682388,0.9964109,0.000011292411,0.0012162051,0.00060821127,0.00052428595,0.0009585125,0.00006248577,0.00018128306],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.992756,0.0034107838,0.002583875,0.00052173337,0.000067977715,0.0006596504],"domain_scores_gemma":[0.99378276,0.001222686,0.0035633382,0.0011312087,0.00014289528,0.00015711288],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0028336865,0.000574056,0.0053310986,0.00026134503,0.000604602,0.000022146,0.00067644217,0.0003168326,0.00012743151],"category_scores_gemma":[0.0010381262,0.0003323861,0.0009658391,0.0007285085,0.00009029675,0.00004101894,0.00020804489,0.0009583632,0.00036045292],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000043806917,0.000058423237,0.000003003013,0.95801246,0.0002912655,2.4393276e-7,0.000105916486,1.2063899e-7,5.955243e-8,0.0007145858,0.01785366,0.022955872],"study_design_scores_gemma":[0.00016687818,0.0001727593,0.000005252039,0.33554602,0.0013963041,0.00006782357,0.000011973204,9.280518e-8,4.0125602e-8,0.000012398245,0.6624204,0.00020006156],"about_ca_topic_score_codex":0.00044258943,"about_ca_topic_score_gemma":0.00004305032,"teacher_disagreement_score":0.6445667,"about_ca_system_score_codex":0.00022553025,"about_ca_system_score_gemma":0.0021510357,"threshold_uncertainty_score":0.9999128},"labels":[],"label_agreement":null},{"id":"W2763579500","doi":"10.1093/pch/8.suppl_b.35bb","title":"ImmunodéFiciences Primaires Et Mortalité : Est-Il Possible De PréVenir?","year":2003,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"","keywords":"Medicine","score_opus":0.013533420101081939,"score_gpt":0.28098075258840594,"score_spread":0.267447332487324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763579500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68116665,0.2699076,0.0005430299,0.023063535,0.011633353,0.00071957393,0.00026880662,0.00017508879,0.012522374],"genre_scores_gemma":[0.9124568,0.075193405,0.0011053147,0.0033394112,0.0007304613,0.000047779457,0.00014777442,0.00006590358,0.006913126],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959047,0.001307587,0.00081255776,0.0005550134,0.000056601915,0.001363571],"domain_scores_gemma":[0.9984827,0.0002841224,0.00045881997,0.00047144722,0.0001253583,0.00017756532],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0020723294,0.00039654697,0.00059235777,0.0002570259,0.0011479115,0.00010387636,0.0002915036,0.0005460904,0.00093278056],"category_scores_gemma":[0.00034796903,0.00038782327,0.00023601383,0.00079233176,0.00021695059,0.00026226943,0.00008601244,0.0009441749,0.0003912553],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018411141,0.00414758,0.32978433,0.0013829829,0.000592599,0.000019547184,0.0091973245,0.00024440236,0.0046762284,0.5588089,0.046561223,0.04440077],"study_design_scores_gemma":[0.0017573053,0.0011114428,0.1617696,0.0001840115,0.00015220302,0.00085278484,0.0006535497,0.000011955069,0.0014663925,0.0030217296,0.82835656,0.00066247786],"about_ca_topic_score_codex":0.004929713,"about_ca_topic_score_gemma":0.0008291338,"teacher_disagreement_score":0.7817953,"about_ca_system_score_codex":0.00028849818,"about_ca_system_score_gemma":0.0021554332,"threshold_uncertainty_score":0.9999805},"labels":[],"label_agreement":null},{"id":"W2765273959","doi":"10.1503/cmaj.161288","title":"Persistence of immunity after vaccination with a capsular group B meningococcal vaccine in 3 different toddler schedules","year":2017,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"St. George's, University of London; University of Oxford; Università degli Studi di Padova; Università degli Studi di Firenze; University of Bristol; Università degli Studi di Milano","keywords":"Medicine; Immunogenicity; Booster dose; Toddler; Vaccination; Group B; Antibody; Booster (rocketry); Persistence (discontinuity); Meningococcal vaccine; Pediatrics; Immunology; Internal medicine; Immunization; Psychology","score_opus":0.008856020111086075,"score_gpt":0.22173955448676352,"score_spread":0.21288353437567745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765273959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951894,0.00024371916,0.00004207487,0.0035470545,0.00059276575,0.00008431068,0.000014123854,0.0000050886683,0.00028144778],"genre_scores_gemma":[0.9994688,0.00007010567,0.000023464769,0.00011973429,0.00016752236,0.000011372171,0.00001126503,0.000007253041,0.0001204522],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989839,0.00019435625,0.00031952406,0.00011185127,0.00009881632,0.00029151954],"domain_scores_gemma":[0.9989877,0.000058881327,0.0003213981,0.00016473437,0.00032333168,0.00014396977],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008416834,0.000111817615,0.0002521237,0.00017041671,0.00039969385,0.00006107782,0.0002328871,0.00033761316,0.0041044992],"category_scores_gemma":[0.0008187248,0.00008210786,0.00006497157,0.000060375103,0.00002744808,0.00019676902,0.00002844337,0.0006507864,0.0000220507],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014139462,0.00012746941,0.98298186,0.000012157189,0.00021287882,0.000027901424,0.00035354096,0.0000011924155,0.005912471,0.00026880123,0.0009098804,0.009050455],"study_design_scores_gemma":[0.001986173,0.00012513617,0.98698956,0.00009336449,0.000025849542,0.00011094536,0.0002103273,0.000010180427,0.000555334,0.000049542614,0.009743342,0.0001002747],"about_ca_topic_score_codex":0.0072261826,"about_ca_topic_score_gemma":0.1303585,"teacher_disagreement_score":0.12313231,"about_ca_system_score_codex":0.00043473713,"about_ca_system_score_gemma":0.00036044524,"threshold_uncertainty_score":0.99938476},"labels":[],"label_agreement":null},{"id":"W2768057291","doi":"10.1071/ma17064","title":"Changing epidemiology of invasive meningococcal disease in Australia 1994–2016","year":2017,"lang":"en","type":"article","venue":"Microbiology Australia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carbon Engineering (Canada)","funders":"","keywords":"Epidemiology; Medicine; Case fatality rate; Outbreak; Incidence (geometry); Disease; Meningitis; Meningococcal disease; Vaccination; Public health; Pediatrics; Neisseria meningitidis; Intensive care medicine; Immunology; Internal medicine; Virology; Pathology; Biology","score_opus":0.07418418250805486,"score_gpt":0.33963785205547337,"score_spread":0.2654536695474185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2768057291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964095,0.00026790393,0.00002182466,0.00037694318,0.0022688045,0.00031564836,0.00024697857,0.00003438885,0.000058059617],"genre_scores_gemma":[0.99059373,0.00004099221,0.00009229953,0.000044849825,0.00010900454,0.00004846512,0.00029793705,0.00001670151,0.008756048],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99741143,0.00045542206,0.000728696,0.00053082523,0.0000061729934,0.00086744974],"domain_scores_gemma":[0.9982714,0.00027805025,0.0005710659,0.00076355005,0.00005542709,0.00006049645],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007184495,0.00031842533,0.0007703704,0.00033948364,0.0003470295,0.000009852706,0.00058197463,0.0006128122,0.002130874],"category_scores_gemma":[0.0005786949,0.00027934686,0.00020243044,0.00009951516,0.00083421473,0.0001684719,0.00028937694,0.00043597966,0.00062879594],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017817346,0.00009772444,0.3980166,0.000030321684,0.00009938017,0.000006950965,0.00011014831,0.00001016723,0.59825087,0.0010258903,0.0020930655,0.00008069842],"study_design_scores_gemma":[0.0029418285,0.0002848754,0.80122316,0.00027153554,0.00011321725,0.00012878382,0.00008270391,0.0000011060706,0.1773908,0.0011418989,0.015849654,0.00057043036],"about_ca_topic_score_codex":0.0025024076,"about_ca_topic_score_gemma":0.00051574426,"teacher_disagreement_score":0.42086008,"about_ca_system_score_codex":0.000050850085,"about_ca_system_score_gemma":0.00006570752,"threshold_uncertainty_score":0.99996585},"labels":[],"label_agreement":null},{"id":"W2773830034","doi":"10.1186/s12866-017-1140-1","title":"The distinctive cell division interactome of Neisseria gonorrhoeae","year":2017,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"FtsZ; Interactome; Cell division; Biology; Neisseria gonorrhoeae; Cell biology; Cell; Genetics; Gene","score_opus":0.014530400435562708,"score_gpt":0.2622113943396707,"score_spread":0.24768099390410803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773830034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99367684,0.00068860705,0.00015953276,0.00010552866,0.003326845,0.0001688425,0.00008039948,0.000025397854,0.0017679936],"genre_scores_gemma":[0.99689853,0.000061458224,0.000034171935,0.00001243742,0.000051429735,0.000013554195,0.00007997148,0.000011670018,0.0028367874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899423,0.00017754799,0.00030497514,0.00023740523,0.0000018601995,0.00028400062],"domain_scores_gemma":[0.9984906,0.00031082262,0.00040827418,0.00067837164,0.00009907207,0.000012899389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020410254,0.00015709145,0.00026665552,0.000040447907,0.0008774432,0.000041889634,0.0005297625,0.00021457823,0.00043942864],"category_scores_gemma":[0.0001889856,0.00009871835,0.00012452093,0.000028885303,0.00041549685,0.00008556074,0.00032398436,0.00018455929,0.00040364068],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017005674,0.00007028374,0.018986084,0.0000096184895,0.000043938297,5.7404524e-8,0.00006266387,4.3780187e-7,0.9772153,0.00050134293,0.0013486615,0.0015915652],"study_design_scores_gemma":[0.0014114182,0.0003515999,0.2231746,0.000027290978,0.000040190855,0.00006804553,0.00014042298,0.0000015661054,0.48768678,0.00020476428,0.28667048,0.00022282387],"about_ca_topic_score_codex":0.00026612022,"about_ca_topic_score_gemma":0.00042722642,"teacher_disagreement_score":0.4895285,"about_ca_system_score_codex":0.000018259496,"about_ca_system_score_gemma":0.000040632527,"threshold_uncertainty_score":0.6748672},"labels":[],"label_agreement":null},{"id":"W2776940955","doi":"10.1212/01.wnl.0000430451.92743.a5","title":"Adjunctive dexamethasone in adults with meningococcal meningitis","year":2013,"lang":"en","type":"article","venue":"Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Public Health","funders":"","keywords":"Meningococcal meningitis; Dexamethasone; Meningitis; Medicine; Glasgow Outcome Scale; Incidence (geometry); Cohort; Meningococcal disease; Pediatrics; Cohort study; Neisseria meningitidis; Internal medicine; Glasgow Coma Scale; Surgery; Biology","score_opus":0.006488811891307007,"score_gpt":0.2017915861186667,"score_spread":0.1953027742273597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2776940955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965191,0.00012226183,0.00003017984,0.00078746834,0.000509019,0.00028388583,0.0000045153374,0.0000668172,0.0016767425],"genre_scores_gemma":[0.99927205,0.0000149447305,0.0000591139,0.0002413686,0.00003834562,0.00015368006,0.000026548474,0.000014855311,0.00017908316],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990329,0.00017774932,0.00016848408,0.00028881838,0.000007905055,0.000324154],"domain_scores_gemma":[0.99957716,0.00013134087,0.000057699894,0.00016172706,0.000054243825,0.000017843531],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000056750534,0.00013656152,0.00022584519,0.00012712544,0.0000630189,0.0000090466165,0.00009130668,0.00022127469,0.0023022522],"category_scores_gemma":[0.000030868458,0.000105883686,0.000027316732,0.00015541686,0.00010673546,0.00011040264,0.000047306814,0.0003358521,0.00055569154],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004459837,0.00048630574,0.2405306,0.000020361253,0.00019388,0.00003328521,0.0011824364,0.00003281724,0.72309613,0.0017957722,0.004417874,0.023750683],"study_design_scores_gemma":[0.007223691,0.0055618985,0.9404878,0.000026783991,0.000024999124,0.00079839973,0.00005605945,0.00002662017,0.016645849,0.0003429853,0.028457412,0.00034748268],"about_ca_topic_score_codex":0.0027273204,"about_ca_topic_score_gemma":0.0007901304,"teacher_disagreement_score":0.7064503,"about_ca_system_score_codex":0.000008280211,"about_ca_system_score_gemma":0.000017733186,"threshold_uncertainty_score":0.9986098},"labels":[],"label_agreement":null},{"id":"W2777172899","doi":"","title":"Acute and cronic meningitis","year":2010,"lang":"en","type":"article","venue":"Pure Amsterdam UMC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Meningitis; Intensive care medicine; Pediatrics","score_opus":0.00595324340506207,"score_gpt":0.2334424961310064,"score_spread":0.22748925272594434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777172899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944701,0.0003228634,0.00002021318,0.00053450326,0.0019786668,0.000082149614,0.000020823229,0.0000753943,0.002495284],"genre_scores_gemma":[0.9959069,0.000042320975,0.00006727308,0.000059543043,0.00010518627,0.000014977971,0.000033420733,0.000010435067,0.00375995],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.999506,0.000022525597,0.00010977131,0.00016461396,0.000005510001,0.00019161083],"domain_scores_gemma":[0.9997231,0.000027264165,0.00003711626,0.00016942972,0.000025261521,0.000017826951],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000058812875,0.0000989611,0.00012904273,0.000043910164,0.00016961574,0.000042958236,0.00007342896,0.00016841877,0.0014575383],"category_scores_gemma":[0.000011533214,0.000082141225,0.00003513646,0.000048120677,0.00007627424,0.00009458678,0.00006896995,0.00024208378,0.00032781356],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022253058,0.000022949578,0.0039815335,0.0000039923602,0.00008224713,0.0000012570795,0.00008518204,2.2192246e-8,0.9804061,0.0016464476,0.0036681958,0.010079842],"study_design_scores_gemma":[0.0015563337,0.0002186047,0.036994517,0.000011023277,0.000121955294,0.0010851765,0.000034131197,0.0000016957943,0.16835299,0.00073799444,0.79059213,0.00029341356],"about_ca_topic_score_codex":0.00003254581,"about_ca_topic_score_gemma":0.00011372652,"teacher_disagreement_score":0.8120531,"about_ca_system_score_codex":0.000003934542,"about_ca_system_score_gemma":0.00001202029,"threshold_uncertainty_score":0.9994553},"labels":[],"label_agreement":null},{"id":"W2777751115","doi":"10.1055/s-0037-1615794","title":"Traumatic Neonatal Lumbar Punctures: Experience at a Large Pediatric Tertiary Care Center in Canada","year":2017,"lang":"en","type":"article","venue":"American Journal of Perinatology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Medicine; Lumbar puncture; Lumbar; Retrospective cohort study; Trauma center; Group B; Streptococcus; Tertiary care; Pediatrics; Enterococcus faecalis; Cerebrospinal fluid; Staphylococcus aureus; Surgery; Internal medicine","score_opus":0.0060113689621267286,"score_gpt":0.24469779265862038,"score_spread":0.23868642369649365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777751115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634516,0.0014541731,0.000011598512,0.0002610112,0.0017607765,0.000064687956,0.000027820639,0.0000045621828,0.00007020112],"genre_scores_gemma":[0.9995305,0.00018394469,0.0000295818,0.00011956135,0.00006728832,0.000007219758,0.00000635768,0.0000110514375,0.000044484317],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99887794,0.00014101347,0.00041997925,0.00016270878,0.000026376008,0.00037197227],"domain_scores_gemma":[0.99897057,0.000044082444,0.0005680175,0.00028007725,0.00009292313,0.00004433534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007422601,0.00015872555,0.0004607187,0.00012987196,0.00029139823,0.000016187123,0.00041895336,0.00006957809,0.000549916],"category_scores_gemma":[0.00008181912,0.0001256251,0.00009209235,0.000059657803,0.00018537365,0.00013881776,0.00013386126,0.000302692,0.000014215279],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011328339,0.000057026275,0.9690882,0.000021954127,0.000055354885,0.0001554355,0.003670336,0.0000021354517,0.001360571,0.000030106039,0.00044717567,0.024998445],"study_design_scores_gemma":[0.0017839976,0.00022347663,0.9030334,0.000021011154,0.000027106435,0.0024991317,0.007199349,0.00000145049,0.0009133406,0.000005921352,0.084106684,0.0001851759],"about_ca_topic_score_codex":0.19048734,"about_ca_topic_score_gemma":0.61899775,"teacher_disagreement_score":0.4285104,"about_ca_system_score_codex":0.00026476744,"about_ca_system_score_gemma":0.00036626428,"threshold_uncertainty_score":0.81490326},"labels":[],"label_agreement":null},{"id":"W2778168673","doi":"","title":"Gastro-intestinale klachten bij meningokokkeninfectie","year":2017,"lang":"nl","type":"article","venue":"Data Archiving and Networked Services (DANS)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Chills; Vomiting; Pneumonia; Sore throat; Nausea; Pediatrics; Meningitis; Meningococcal disease; Sepsis; Prednisone; Surgery; Internal medicine; Neisseria meningitidis","score_opus":0.02780724987024306,"score_gpt":0.27490897820192073,"score_spread":0.24710172833167768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2778168673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851106,0.0024794284,0.0006569777,0.0004540952,0.0030706734,0.000320967,0.0012144966,0.00016534036,0.00652744],"genre_scores_gemma":[0.99010074,0.0018176192,0.0004024242,0.00010656971,0.0010506925,0.00001844969,0.002500163,0.000065510794,0.003937813],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99684626,0.00041800144,0.0005735128,0.0011354111,0.0000454794,0.0009813135],"domain_scores_gemma":[0.9956376,0.0003778502,0.00064718263,0.0031117534,0.00007124043,0.00015437185],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.00078600243,0.00059398345,0.00070514914,0.00013206307,0.0034999973,0.0007621482,0.002436135,0.00029559562,0.0004253933],"category_scores_gemma":[0.000065285276,0.0005257063,0.00011130108,0.00009821491,0.0005020968,0.0008844138,0.003507723,0.0007668959,0.00038758203],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011215006,0.00056345103,0.8154318,0.0008594108,0.0017618784,0.000064580665,0.003891443,0.000075336,0.12336089,0.0006808709,0.01088442,0.041304428],"study_design_scores_gemma":[0.003180965,0.0008046703,0.71880937,0.0022013641,0.00097105204,0.0014290746,0.0011566067,0.012462561,0.0007134394,0.00035395872,0.25655952,0.0013574053],"about_ca_topic_score_codex":0.009079831,"about_ca_topic_score_gemma":0.006008894,"teacher_disagreement_score":0.2456751,"about_ca_system_score_codex":0.000024275709,"about_ca_system_score_gemma":0.0000613856,"threshold_uncertainty_score":0.99971944},"labels":[],"label_agreement":null},{"id":"W2779404956","doi":"10.9778/cmajo.20170072","title":"Case–control study of household contacts to examine immunological protection from<i>Bordetella pertussis</i>transmission — study protocol","year":2017,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Child and Family Research Institute; Provincial Laboratory of Public Health; Public Health Ontario; BC Centre for Disease Control; McGill University Health Centre; Brampton Civic Hospital; Mount Sinai Hospital; University of Calgary; Fraser Health; University of Alberta; University of Toronto; Dalhousie University","funders":"Sanofi Pasteur; Sanofi; GlaxoSmithKline","keywords":"Bordetella pertussis; Immunology; Medicine; Transmission (telecommunications); Whooping cough; Pertussis vaccine; Immune system; Immunity; Biology; Vaccination; Immunization","score_opus":0.0714742018271752,"score_gpt":0.3290036117439833,"score_spread":0.25752940991680806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2779404956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86284465,0.000013459954,0.00009956442,0.000093445014,0.00035283001,0.13617177,0.000047124617,0.00005056798,0.0003266113],"genre_scores_gemma":[0.9333707,9.695833e-7,0.000025930936,0.000022470624,0.000055581815,0.06593127,0.0000044057188,0.000022249958,0.0005664013],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99816686,0.0005285457,0.0004971752,0.00050766923,0.000030425013,0.00026930944],"domain_scores_gemma":[0.9984414,0.000077797056,0.0003238806,0.0009901676,0.0001230234,0.0000437359],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048563295,0.0002541254,0.0006016057,0.00008481214,0.00096326723,0.00020442305,0.0007292685,0.00021779233,0.0010079073],"category_scores_gemma":[0.00015119053,0.00017996796,0.00006429,0.00007657618,0.00005159807,0.00028479117,0.00045165964,0.00028181757,0.00006583858],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004877542,0.0065744333,0.04038016,0.0000146948805,0.0006204248,0.000100281024,0.0019380007,0.000007125889,0.8660569,0.000005982106,0.00018150781,0.079242945],"study_design_scores_gemma":[0.025875036,0.014912375,0.88503003,0.00007907809,0.00022754804,0.00022235414,0.0023147513,0.0000035505939,0.047509443,0.000017915485,0.023367569,0.00044033633],"about_ca_topic_score_codex":0.026440438,"about_ca_topic_score_gemma":0.002050206,"teacher_disagreement_score":0.8446499,"about_ca_system_score_codex":0.000031288015,"about_ca_system_score_gemma":0.0000389655,"threshold_uncertainty_score":0.9999053},"labels":[],"label_agreement":null},{"id":"W2782821223","doi":"10.1097/pcc.0000000000001454","title":"Extracorporeal Membrane Oxygenation for Pertussis: Predictors of Outcome Including Pulmonary Hypertension and Leukodepletion","year":2018,"lang":"en","type":"article","venue":"Pediatric Critical Care Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Extracorporeal Life Support Organization","keywords":"Medicine; Extracorporeal membrane oxygenation; Odds ratio; Extracorporeal; Retrospective cohort study; Logistic regression; Internal medicine; Intensive care medicine","score_opus":0.04690991245414791,"score_gpt":0.316038553042346,"score_spread":0.2691286405881981,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782821223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917709,0.0031462605,0.00086082227,0.0011106418,0.002462502,0.00025242637,0.00004804088,0.000061066676,0.0002872884],"genre_scores_gemma":[0.9976837,0.00021436969,0.00010257781,0.00006684913,0.0016687224,0.00002664386,0.00017332396,0.000014828973,0.000048967166],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989973,0.000061500636,0.0004384469,0.0002556591,0.000037345617,0.00020979358],"domain_scores_gemma":[0.99874526,0.0004948516,0.00007812727,0.00012900094,0.0005109155,0.000041832867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026363862,0.00013910396,0.00032739344,0.00019321966,0.0002153419,0.000004556194,0.00006027121,0.00020149557,0.00018723111],"category_scores_gemma":[0.0012117394,0.00010268352,0.00005151711,0.00015853414,0.0002763832,0.00008729595,0.00004800795,0.000113784794,0.0000057683537],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005788812,0.00019686017,0.25148314,0.0010386267,0.000054264012,0.0000033763408,0.00096262235,3.542789e-7,0.7301211,0.0025187675,0.0020856594,0.010956388],"study_design_scores_gemma":[0.007792815,0.0060619563,0.9270823,0.00020901204,0.002666008,0.00072652113,0.004254379,0.0002854479,0.029999312,0.0011074777,0.01897583,0.00083896436],"about_ca_topic_score_codex":0.00017159546,"about_ca_topic_score_gemma":0.000020148856,"teacher_disagreement_score":0.70012176,"about_ca_system_score_codex":0.000026043052,"about_ca_system_score_gemma":0.000020431113,"threshold_uncertainty_score":0.41873127},"labels":[],"label_agreement":null},{"id":"W2785775916","doi":"","title":"Seroprevalence of serum bactericidal antibodies to Neisseria meningitidis serogroup A in Burkina Faso","year":2009,"lang":"en","type":"article","venue":"Bristol Research (University of Bristol)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Neisseria meningitidis; Seroprevalence; Virology; Antibody; Microbiology; Medicine; Biology; Immunology; Bacteria; Serology","score_opus":0.03271882385298029,"score_gpt":0.301109325101786,"score_spread":0.2683905012488057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2785775916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972419,0.00035350898,0.00008650806,0.0007722558,0.00013251664,0.0003084632,0.00009154008,0.000033345816,0.0009799768],"genre_scores_gemma":[0.9976697,0.00019921183,0.000306338,0.000010657917,0.000013644055,5.6762144e-7,0.000021557596,0.0000085584215,0.001769781],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985278,0.00032538307,0.00024208632,0.0003573049,0.000065556684,0.00048182483],"domain_scores_gemma":[0.9989929,0.00009494393,0.00012362724,0.00036432632,0.00036241044,0.000061763734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005314345,0.00014695793,0.0004427851,0.0006078259,0.00025567907,0.000014293837,0.0004964539,0.0001834638,0.00056250865],"category_scores_gemma":[0.00011120532,0.00017874579,0.00010857641,0.00090294564,0.00028962747,0.0002562412,0.00022726042,0.00032877893,0.00010834979],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005935003,0.0003968728,0.038205393,0.000090932605,0.000060522045,0.000018829169,0.0019876016,0.000013204578,0.9415827,0.00037088574,0.0030862978,0.01359328],"study_design_scores_gemma":[0.0013831483,0.0013229977,0.95447,0.00021863265,0.000025879528,0.00004700177,0.0043475237,0.000018374865,0.021675808,0.00013247998,0.01609417,0.00026401016],"about_ca_topic_score_codex":0.0032465938,"about_ca_topic_score_gemma":0.0012451507,"teacher_disagreement_score":0.91990685,"about_ca_system_score_codex":0.00011364254,"about_ca_system_score_gemma":0.000106337604,"threshold_uncertainty_score":0.7289042},"labels":[],"label_agreement":null},{"id":"W2786886126","doi":"10.1016/j.ijid.2018.01.019","title":"Whole genome typing of the recently emerged Canadian serogroup W Neisseria meningitidis sequence type 11 clonal complex isolates associated with invasive meningococcal disease","year":2018,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; BC Mental Health & Substance Use Services; Université Laval; Public Health Ontario; University of Toronto; University of Manitoba; Institut National de Santé Publique du Québec; Centre hospitalier de l'Université Laval; Public Health Agency of Canada","funders":"Public Health England; European Commission; Meningitis Research Foundation; Government of Canada; Wellcome Trust","keywords":"Neisseria meningitidis; Meningococcal disease; Multilocus sequence typing; Biology; Whole genome sequencing; Typing; Microbiology; Virology; Genome; Serotype; Neisseriaceae; Genetics; Genotype; Gene; Bacteria; Antibiotics","score_opus":0.02060763645846541,"score_gpt":0.2624749375166016,"score_spread":0.2418673010581362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2786886126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965695,0.00027273843,0.000017398306,0.0005371757,0.0019810086,0.00011491741,0.00037650138,0.000019287741,0.00011146923],"genre_scores_gemma":[0.99928594,0.000046194593,0.000008602482,0.00014859681,0.00024830687,0.000004156066,0.00015571443,0.000016330769,0.000086177824],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99903435,0.00015853641,0.00039737785,0.00013935202,0.0000502948,0.00022007887],"domain_scores_gemma":[0.99762,0.000105266874,0.00052243716,0.0001256344,0.001517702,0.000108980195],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011503911,0.00015684366,0.00022472256,0.00020164259,0.000260416,0.000050697763,0.00033877697,0.000072125455,0.0010536066],"category_scores_gemma":[0.0004719186,0.00011090918,0.00013975671,0.00024784857,0.0002292691,0.00022341443,0.0000633673,0.00016125193,0.000021204938],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005649911,0.00025150704,0.6408923,0.000007422695,0.0011958588,0.000007818574,0.0002288695,0.000098974364,0.3552234,0.00032081496,0.0010088114,0.00019926064],"study_design_scores_gemma":[0.0015534551,0.0005525319,0.98236156,0.00026291984,0.00023327327,0.00020451378,0.00011027467,0.000014540441,0.002925698,0.00034397063,0.011232842,0.0002044527],"about_ca_topic_score_codex":0.0033695884,"about_ca_topic_score_gemma":0.017865073,"teacher_disagreement_score":0.35229766,"about_ca_system_score_codex":0.00022371743,"about_ca_system_score_gemma":0.0006657186,"threshold_uncertainty_score":0.9998596},"labels":[],"label_agreement":null},{"id":"W2786977630","doi":"10.1136/archdischild-2017-313913","title":"Management of suspected paediatric meningitis: a multicentre prospective cohort study","year":2018,"lang":"en","type":"article","venue":"Archives of Disease in Childhood","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Pfizer UK; National Institute for Health and Care Research","keywords":"Medicine; Lumbar puncture; Meningitis; Pediatrics; Prospective cohort study; Antibiotics; Cohort; Sepsis; Medical record; Emergency medicine; Internal medicine; Cerebrospinal fluid","score_opus":0.004145915956488404,"score_gpt":0.2282553268314009,"score_spread":0.22410941087491248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2786977630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959819,0.00034615194,0.000009267372,0.00001963258,0.0002314179,0.0014665722,0.000057622437,0.00003148337,0.0018559975],"genre_scores_gemma":[0.9995613,0.00006641489,0.00009505279,0.0000021323963,0.000040402414,0.00009227683,0.000035347755,0.000011178306,0.00009589914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990585,0.00013105286,0.00032480698,0.0002680686,0.000024119077,0.00019344823],"domain_scores_gemma":[0.9994465,0.00007807039,0.0001331035,0.00027639006,0.000038129994,0.000027821749],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000068280475,0.00012962063,0.0002486293,0.00020234924,0.00006492289,0.0000043394275,0.00014881618,0.000028498229,0.00021851552],"category_scores_gemma":[0.000031715615,0.00011578558,0.000080378195,0.00024075335,0.00013868751,0.000050169234,0.00013907612,0.00008608,0.000021314885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056688895,0.0034203373,0.9883941,0.000038080085,0.000565139,0.0000039186616,0.0024270576,0.0000029527089,0.0025725854,0.00038963312,0.000019807016,0.001599514],"study_design_scores_gemma":[0.0031710558,0.00043872808,0.9922242,0.000092774695,0.00019793934,9.945675e-7,0.00078714977,0.0000031007933,0.0023756402,0.0005763733,0.000023506493,0.00010852015],"about_ca_topic_score_codex":0.00012981835,"about_ca_topic_score_gemma":0.000068415626,"teacher_disagreement_score":0.0038301307,"about_ca_system_score_codex":0.000009478385,"about_ca_system_score_gemma":0.000029105446,"threshold_uncertainty_score":0.4721599},"labels":[],"label_agreement":null},{"id":"W2788510636","doi":"10.5539/gjhs.v10n3p121","title":"Acute Bacterial Meningitis Complicated by Brain Herniation Shortly after Lumbar Puncture: A Case Report","year":2018,"lang":"en","type":"article","venue":"Global Journal of Health Science","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Lumbar puncture; Meningitis; Brain herniation; Anesthesia; Cerebrospinal fluid; Vomiting; Coma (optics); Surgery; Complication; Subarachnoid hemorrhage; Lumbar; External ventricular drain; Internal medicine","score_opus":0.01292771836947283,"score_gpt":0.3148649593158271,"score_spread":0.30193724094635427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788510636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923757,0.00040171065,0.0006925312,0.0026053148,0.003597622,0.00013124703,0.0000849288,0.000020505826,0.0000904545],"genre_scores_gemma":[0.99903375,0.000022889735,0.00022216205,0.00042542003,0.000207,0.0000029711362,0.000018014955,0.000004309534,0.00006348939],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99848485,0.0000999809,0.0007119756,0.000234589,0.00006183413,0.00040675272],"domain_scores_gemma":[0.9985462,0.000012322652,0.0006611199,0.00018864471,0.00049866905,0.00009306483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011763304,0.00012831132,0.0002923242,0.000079844925,0.0005372823,0.00007799899,0.00021456945,0.000098966164,0.00037903697],"category_scores_gemma":[0.00008148566,0.000097610726,0.00006550845,0.000448153,0.0003970544,0.00036054157,0.000067120745,0.00015839224,0.000049515245],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052351056,0.00018410594,0.017453203,0.000011308407,0.00013217964,0.0013151688,0.0001747823,5.7500165e-7,0.8806983,0.000083705476,0.081857815,0.017565329],"study_design_scores_gemma":[0.0017998756,0.0019426346,0.15694971,0.00007110496,0.000057650428,0.7262314,0.00006757571,0.000005791323,0.017029583,0.00018167993,0.09538988,0.00027314303],"about_ca_topic_score_codex":0.00034555534,"about_ca_topic_score_gemma":0.00010661205,"teacher_disagreement_score":0.86366874,"about_ca_system_score_codex":0.0002060749,"about_ca_system_score_gemma":0.0005248888,"threshold_uncertainty_score":0.41501892},"labels":[],"label_agreement":null},{"id":"W2789899133","doi":"10.1093/pch/pxx163","title":"Mise à jour sur la vaccination contre la méningococcie invasive chez les enfants et les adolescents canadiens","year":2018,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Paediatric Society","funders":"","keywords":"Medicine; Gynecology; Political science","score_opus":0.013760895359797331,"score_gpt":0.27070473023391944,"score_spread":0.2569438348741221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789899133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9229545,0.042670067,0.00014129456,0.02009951,0.00688351,0.0009208794,0.0007384842,0.00013344237,0.0054583163],"genre_scores_gemma":[0.96344835,0.029446034,0.00005068967,0.0012237167,0.0017997029,0.000019107089,0.00022896915,0.000057776913,0.003725648],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99568725,0.0020087357,0.00071447215,0.0005546235,0.00005431657,0.0009806273],"domain_scores_gemma":[0.997692,0.00067067746,0.0006153659,0.0003372676,0.0004485673,0.00023613189],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015574523,0.0004251921,0.0006073068,0.00035861036,0.0012519999,0.00009697601,0.0002691414,0.0009673929,0.0009877281],"category_scores_gemma":[0.0007447724,0.00043378302,0.0001813125,0.0004728167,0.00018711176,0.00023329936,0.00013871472,0.0011830786,0.0002450429],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045204881,0.0019313886,0.6753614,0.001624657,0.0005137905,0.00002385391,0.012221606,0.000010478545,0.001900096,0.012372088,0.1367189,0.15686971],"study_design_scores_gemma":[0.0032231933,0.00050542876,0.58962303,0.0005413018,0.00012290574,0.00026253556,0.000346519,0.00000918413,0.00038161775,0.00008996459,0.40446627,0.00042806464],"about_ca_topic_score_codex":0.05698671,"about_ca_topic_score_gemma":0.09373322,"teacher_disagreement_score":0.26774737,"about_ca_system_score_codex":0.0002841169,"about_ca_system_score_gemma":0.0011613255,"threshold_uncertainty_score":0.9999255},"labels":[],"label_agreement":null},{"id":"W2790070430","doi":"10.14745/ccdr.v43i05a02","title":"Developing a vaccine for Haemophilus influenzae serotype a: Proceedings of a workshop","year":2017,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Lakehead University; NOSM University; Public Health Agency of Canada; National Research Council Canada","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Indigenous; Public health; Health care; Agency (philosophy); Political science; Clinical trial; Medicine; Environmental health; Nursing","score_opus":0.039386930531990653,"score_gpt":0.2954932578079247,"score_spread":0.256106327275934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790070430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948355,0.0011121682,0.000019183526,0.001685309,0.00059164315,0.00042140408,0.00005320077,0.000032573804,0.0012490385],"genre_scores_gemma":[0.99751824,0.00005239631,0.00022462555,0.00009813169,0.00003680172,0.00011177289,0.000098238685,0.00001848764,0.001841323],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990779,0.000012588097,0.0004207954,0.00019941681,0.00002318727,0.0002661187],"domain_scores_gemma":[0.9980389,0.000068137604,0.000501167,0.0008501118,0.00048144392,0.000060234324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022010502,0.00015168039,0.00035426498,0.000043664477,0.0008522905,0.00004601842,0.00051878905,0.0000944508,0.000055982637],"category_scores_gemma":[0.0008028518,0.0001417132,0.00008293592,0.000059658036,0.000060291826,0.00016578974,0.00030441151,0.00013996114,0.0000015965103],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030624398,0.00047556876,0.70813555,0.0011446249,0.002118404,0.00009897146,0.00017211161,0.000028871586,0.09077069,0.020109566,0.1660034,0.007879801],"study_design_scores_gemma":[0.0018518633,0.00005339822,0.33615702,0.0003385012,0.0001995967,0.00022560495,0.00016126089,0.000012770428,0.007896431,0.0007203677,0.65198004,0.0004030991],"about_ca_topic_score_codex":0.11712236,"about_ca_topic_score_gemma":0.16181828,"teacher_disagreement_score":0.48597667,"about_ca_system_score_codex":0.00011049324,"about_ca_system_score_gemma":0.0012365081,"threshold_uncertainty_score":0.8887568},"labels":[],"label_agreement":null},{"id":"W2791657254","doi":"10.14745/ccdr.v43i02a03","title":"Use of a 40-day rolling incidence to monitor pertussis in Nova Scotia, 2015","year":2017,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Nova Scotia Health Authority; Public Health Agency of Canada","funders":"Department of Health, Western Cape Government; Nova Scotia Department of Health and Wellness","keywords":"Nova scotia; Incidence (geometry); Public health; Medicine; Population; Demography; Incubation period; Whooping cough; Geography; Environmental health; Pediatrics; Incubation; Vaccination; Biology; Immunology; Nursing","score_opus":0.041363619209097334,"score_gpt":0.29554314378076607,"score_spread":0.25417952457166876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791657254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965046,0.0009866935,0.000011065631,0.0009832273,0.0009943659,0.00020320699,0.00006978822,0.000014119013,0.00023294146],"genre_scores_gemma":[0.99843967,0.00005663757,0.000073446165,0.00008283122,0.000023251427,0.000015006952,0.00005830699,0.000013956139,0.0012368878],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886405,0.00014116638,0.0004708761,0.00021621607,0.000036212798,0.00027147232],"domain_scores_gemma":[0.9972303,0.00013552491,0.00030484257,0.002039536,0.00018491657,0.00010489142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033179752,0.00014272562,0.00034337942,0.000083356324,0.0003243117,0.0000563337,0.00052207755,0.000082505765,0.00023248926],"category_scores_gemma":[0.0013799482,0.00013529552,0.00006547046,0.00009015418,0.000089470515,0.00023686842,0.0004046778,0.000197275,0.000013268199],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027692766,0.00019799752,0.92512834,0.00003846547,0.00013769185,0.00023670027,0.000078010686,0.00025267102,0.054207474,0.000040223476,0.017658796,0.001746721],"study_design_scores_gemma":[0.00036313018,0.000025856032,0.9263798,0.00022841449,0.000050020666,0.000066975685,0.00006664544,0.000027929002,0.0051527126,0.000012828796,0.06739672,0.00022893876],"about_ca_topic_score_codex":0.92293155,"about_ca_topic_score_gemma":0.89922243,"teacher_disagreement_score":0.049737927,"about_ca_system_score_codex":0.00013999228,"about_ca_system_score_gemma":0.00086916465,"threshold_uncertainty_score":0.5517191},"labels":[],"label_agreement":null},{"id":"W2791747253","doi":"10.1093/jcag/gwy008.300","title":"A299 IDENTIFICATION OF PATHOGENIC BACTERIAL STRAINS IN PAEDIATRIC PATIENTS WITH INFLAMMATORY BOWEL DISEASES USING IMMUNOGLOBULIN G AS A MARKER OF VIRULENCE","year":2018,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta","funders":"","keywords":"Antibody; Microbiology; Inflammatory bowel disease; Biology; Pathogenic bacteria; Ulcerative colitis; Firmicutes; Immune system; Immunoglobulin G; Immunology; Bacteria; Medicine; 16S ribosomal RNA; Disease; Pathology; Genetics","score_opus":0.004327349632082673,"score_gpt":0.20066024963150528,"score_spread":0.1963328999994226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791747253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983516,0.000027076203,0.000009180213,0.0001380762,0.0011015317,0.00012798277,0.00023726997,0.0000012886032,0.0000060437396],"genre_scores_gemma":[0.99982566,0.0000137984525,0.000020437918,0.000026869457,0.00006880982,0.0000012392583,0.000014360987,0.000007160631,0.000021637865],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99840105,0.00046429,0.0007929184,0.000084376436,0.00005441434,0.00020295937],"domain_scores_gemma":[0.99694806,0.00004394327,0.002184861,0.00014182701,0.00064841047,0.000032873322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052722846,0.00009192089,0.00029809817,0.00032022057,0.000069109985,0.000006593166,0.0002092709,0.00014620932,0.00013985827],"category_scores_gemma":[0.00030443285,0.0000717872,0.00011631328,0.00014903906,0.00013186444,0.00012647318,0.000029190935,0.00014991117,0.000002163003],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072014733,0.00009471119,0.87716943,0.000011225901,0.00016186123,2.9193498e-7,0.00011309002,0.000022965336,0.12154448,0.000010190353,0.00008892803,0.00006266368],"study_design_scores_gemma":[0.0020274273,0.00063635857,0.99535495,0.000045609588,0.00011181357,0.000011896991,0.00003687091,0.000003548409,0.001621958,0.000028800634,0.000083298124,0.000037465456],"about_ca_topic_score_codex":0.0022329697,"about_ca_topic_score_gemma":0.048739936,"teacher_disagreement_score":0.119922526,"about_ca_system_score_codex":0.0003351125,"about_ca_system_score_gemma":0.00043481626,"threshold_uncertainty_score":0.9686181},"labels":[],"label_agreement":null},{"id":"W2792111214","doi":"10.14745/ccdr.v42i12a06","title":"Invasive serogroup W Neisseria meningitidis (MenW) in Ontario, Canada shows potential clonal replacement during the period January 1, 2009 – June 30, 2016","year":2016,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Ontario; Public Health Agency of Canada","funders":"European Commission; University of Oxford; Wellcome Trust","keywords":"Neisseria meningitidis; clone (Java method); Multilocus sequence typing; Meningococcal disease; Microbiology; Biology; Public health; Medicine; Veterinary medicine; Genotype; Bacteria; Genetics; Gene","score_opus":0.007150849806043756,"score_gpt":0.19564905279196576,"score_spread":0.18849820298592201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792111214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926552,0.0016320866,0.0000020227185,0.0024885219,0.0016127202,0.0004052538,0.00020940095,0.000027837694,0.00096691906],"genre_scores_gemma":[0.9684519,0.00011865484,0.0000057547795,0.0001670822,0.000044485267,0.00012726932,0.00028119236,0.000023263587,0.030780382],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979703,0.0002688105,0.0006742239,0.00040109857,0.000076302786,0.0006092807],"domain_scores_gemma":[0.9979396,0.00010510717,0.000279028,0.0014023206,0.0001260777,0.0001478996],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027245958,0.0002976714,0.00038371378,0.000052915628,0.0007045526,0.000038720988,0.0004832709,0.000100487705,0.0052663963],"category_scores_gemma":[0.000118263786,0.00020156127,0.00009664817,0.00011259534,0.00011009478,0.00015151575,0.00038852365,0.00035634334,0.000009468902],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017619247,0.00037060617,0.4991701,0.00006928833,0.0009803528,0.00212182,0.00017248986,0.00011291482,0.1986743,0.00013545569,0.29607224,0.00035850276],"study_design_scores_gemma":[0.0021858127,0.000049659655,0.5486254,0.00022614733,0.00011579475,0.0009353289,0.00047427192,0.0000018154303,0.004621988,0.000034921868,0.44219372,0.000535098],"about_ca_topic_score_codex":0.99873215,"about_ca_topic_score_gemma":0.9999423,"teacher_disagreement_score":0.19405232,"about_ca_system_score_codex":0.0017199147,"about_ca_system_score_gemma":0.011255985,"threshold_uncertainty_score":0.9956429},"labels":[],"label_agreement":null},{"id":"W2792335057","doi":"10.1128/mbio.01755-17","title":"Complement C5a Receptor 1 Exacerbates the Pathophysiology of<i>N. meningitidis</i>Sepsis and Is a Potential Target for Disease Treatment","year":2018,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Deutsche Forschungsgemeinschaft; Alberta Innovates; Alberta Innovates - Health Solutions","keywords":"Neisseria meningitidis; Immunology; Sepsis; C5a receptor; Meningococcal disease; Immune system; Complement system; Medicine; Innate immune system; In vivo; Biology; Bacteria","score_opus":0.015782664231060225,"score_gpt":0.2559578855408609,"score_spread":0.24017522130980068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792335057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954945,0.00088173896,0.00021394613,0.0014612182,0.00082631176,0.0003797798,0.00068031723,0.000020863328,0.000041320694],"genre_scores_gemma":[0.99825364,0.00014292797,0.00023195175,0.00012728757,0.00015957248,0.00011123431,0.00020834677,0.000009268317,0.00075576035],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993892,0.00007028186,0.00016472516,0.00018668183,0.0000070517794,0.00018207128],"domain_scores_gemma":[0.99960583,0.000058674894,0.0000767621,0.00017095392,0.00006837946,0.000019385363],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000059525013,0.00011648154,0.00018272402,0.00002765684,0.00027812822,0.0000101605765,0.000062916166,0.000059994418,0.0014737493],"category_scores_gemma":[0.000010942307,0.00007168548,0.000087017586,0.000039145023,0.0001881384,0.000026796424,0.000049161506,0.00002840295,0.000044914952],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005589028,0.00019154436,0.0017012781,0.000014380741,0.0002683648,1.3746642e-7,0.0005101242,3.2580874e-7,0.9653978,0.00043717996,0.023693306,0.0072266916],"study_design_scores_gemma":[0.0024333652,0.0025610733,0.011011205,0.00001771554,0.00020149007,0.0000045659053,0.00022289311,0.00002429175,0.37707406,0.0020371317,0.6042186,0.0001935943],"about_ca_topic_score_codex":0.00015669802,"about_ca_topic_score_gemma":0.0000137893,"teacher_disagreement_score":0.5883237,"about_ca_system_score_codex":0.00001406462,"about_ca_system_score_gemma":0.000019992654,"threshold_uncertainty_score":0.99943906},"labels":[],"label_agreement":null},{"id":"W2792667359","doi":"10.1080/21645515.2018.1445447","title":"Meningococcal vaccination in pregnancy","year":2018,"lang":"en","type":"review","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Vaccination; Meningococcal disease; Tetanus; Pregnancy; Meningitis; Disease; Meningococcal vaccine; Pediatrics; Immunology; Neisseria meningitidis; Immunization; Antigen; Internal medicine; Biology","score_opus":0.07074795570115751,"score_gpt":0.3569819116055007,"score_spread":0.2862339559043432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792667359","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000484528,0.99508005,0.000016039598,0.000012424849,0.0021093292,0.0011254778,0.000034345165,0.00018844967,0.00094932475],"genre_scores_gemma":[0.00042480236,0.9932528,0.000023667964,0.000020542218,0.000299698,0.0003041864,0.0006176321,0.00015587629,0.0049007963],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99681854,0.0004767218,0.0013541777,0.0006770132,0.000028985734,0.0006445468],"domain_scores_gemma":[0.99817955,0.00014988452,0.00064351904,0.00086066657,0.00014511103,0.000021265592],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00028401395,0.0007817738,0.0018242327,0.00070209854,0.0003599793,0.00009053172,0.00062638917,0.0011772017,0.0036451984],"category_scores_gemma":[0.000023493234,0.00065716746,0.00052465266,0.00057867105,0.000046066332,0.00017773236,0.000170402,0.00078555604,0.0011981002],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031415333,0.00038695295,0.000109176886,0.002659208,0.00073836715,0.0000025707554,0.00022238899,1.1689811e-7,0.0009261383,0.0009846068,0.0011483796,0.9927907],"study_design_scores_gemma":[0.0013882092,0.00023806942,0.00040859176,0.00669389,0.00050048303,0.000106189436,0.000013016237,3.0763786e-7,0.00008667804,0.00014141684,0.98975927,0.0006638956],"about_ca_topic_score_codex":0.000104617066,"about_ca_topic_score_gemma":0.00018599129,"teacher_disagreement_score":0.99212676,"about_ca_system_score_codex":0.0002142311,"about_ca_system_score_gemma":0.00013303565,"threshold_uncertainty_score":0.99958795},"labels":[],"label_agreement":null},{"id":"W2793653920","doi":"10.14745/ccdr.v43i78a01","title":"Increase in Neisseria meningitidis serogroup W invasive disease in Canada: 2009–2016","year":2017,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Government of Prince Edward Island; Government of New Brunswick; Public Health Ontario; Dalhousie University; University of Toronto; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; BC Mental Health & Substance Use Services; Memorial University of Newfoundland; Nova Scotia Health Authority; Public Health Agency of Canada","funders":"European Commission; University of Oxford; Public Health Agency; Public Health Agency of Canada; Wellcome Trust","keywords":"Neisseria meningitidis; Serotype; Meningococcal disease; Disease; Multilocus sequence typing; Medicine; Demography; Geography; Biology; Virology; Genotype; Internal medicine","score_opus":0.014337506662936147,"score_gpt":0.23431347057298643,"score_spread":0.21997596391005028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793653920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992612,0.0033767065,4.2188302e-7,0.0011352916,0.0008536103,0.00032659975,0.0003238071,0.000020155854,0.001351385],"genre_scores_gemma":[0.99739194,0.00030838756,0.0000057518537,0.00017684544,0.000027461696,0.000116588264,0.0005998316,0.000026559428,0.0013466211],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99811697,0.00024485233,0.000621846,0.0003847475,0.000047757687,0.00058381265],"domain_scores_gemma":[0.9967079,0.00014163961,0.00036776395,0.0023683303,0.000105418294,0.00030894869],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027715432,0.00027467267,0.00046614755,0.00009317887,0.00062588305,0.00006721045,0.00077156967,0.00007823254,0.00052893866],"category_scores_gemma":[0.0010320036,0.00027534424,0.000070557384,0.00012340886,0.000109686494,0.00027494886,0.00046674485,0.00036554452,0.000007915568],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032632242,0.00014238486,0.9803886,0.000044385368,0.00007280728,0.0020292986,0.000015211819,0.00006408679,0.0020050562,0.00009615303,0.01446466,0.00035105483],"study_design_scores_gemma":[0.0010777743,0.000009647435,0.9379988,0.0002082018,0.0000470339,0.00006467223,0.00012674193,0.000017905604,0.00025885334,0.00006957361,0.05978254,0.00033831352],"about_ca_topic_score_codex":0.9997791,"about_ca_topic_score_gemma":0.9999415,"teacher_disagreement_score":0.04531788,"about_ca_system_score_codex":0.0011761008,"about_ca_system_score_gemma":0.021522377,"threshold_uncertainty_score":0.9999699},"labels":[],"label_agreement":null},{"id":"W2793849706","doi":"10.1016/j.vaccine.2018.02.013","title":"Immunogenicity and safety of one or two doses of the quadrivalent meningococcal vaccine MenACWY-TT given alone or with the 13-valent pneumococcal conjugate vaccine in toddlers: A phase III, open-label, randomised study","year":2018,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Izaak Walton Killam Health Centre","funders":"","keywords":"Medicine; Immunogenicity; Toxoid; Vaccination; Conjugate vaccine; Meningococcal vaccine; Adverse effect; Neisseria meningitidis; Tetanus; Pediatrics; Pneumococcal conjugate vaccine; Meningitis; Immunization; Immunology; Internal medicine; Immune system; Streptococcus pneumoniae; Antibiotics; Microbiology","score_opus":0.03418621698143559,"score_gpt":0.31292487289927245,"score_spread":0.27873865591783686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793849706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921397,0.00072208064,0.000043546923,0.0018075571,0.00038218117,0.0047210315,0.00009089055,0.000036449397,0.000056536108],"genre_scores_gemma":[0.998426,0.00035993202,0.000055552224,0.000089505695,0.00011121622,0.00019054362,0.000029799738,0.000040908297,0.0006965012],"study_design_codex":"bench_or_experimental","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9964912,0.00091919507,0.001387821,0.0006004686,0.00008342462,0.0005179082],"domain_scores_gemma":[0.997219,0.00062066666,0.0007906015,0.0009653912,0.00034879745,0.00005552498],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014519412,0.00048647815,0.0014900721,0.00017737679,0.00045779243,0.00004197929,0.0008382825,0.00016657021,0.0015410307],"category_scores_gemma":[0.00019013202,0.00022761612,0.000094238436,0.0007739637,0.000108885244,0.00022759958,0.0008251128,0.00042066624,0.000010052421],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.24624464,0.005531928,0.015096749,0.000051906038,0.0015416929,0.0000049594173,0.0019579148,0.0000073690708,0.72707385,0.000035841378,0.0007735642,0.001679563],"study_design_scores_gemma":[0.5825395,0.016482303,0.15117092,0.0004566265,0.0011101566,0.00022087843,0.0020257821,0.000043524884,0.24085617,0.000023630224,0.004481228,0.0005892775],"about_ca_topic_score_codex":0.0034197904,"about_ca_topic_score_gemma":0.013300045,"teacher_disagreement_score":0.4862177,"about_ca_system_score_codex":0.00006624009,"about_ca_system_score_gemma":0.00017903953,"threshold_uncertainty_score":0.9993717},"labels":[],"label_agreement":null},{"id":"W2793884390","doi":"10.1093/jpids/pix113","title":"Randomized Controlled Trial of the Safety and Immunogenicity of Revaccination With Tetanus-Diphtheria-Acellular Pertussis Vaccine (Tdap) in Adults 10 Years After a Previous Dose","year":2018,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Government of Newfoundland and Labrador; Memorial University of Newfoundland; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Medicine; Diphtheria; Pertactin; Tetanus; Vaccination; Adverse effect; Toxoid; Immunogenicity; Immunity; Immunology; Immunization; Filamentous haemagglutinin adhesin; Whooping cough; Pertussis vaccine; Randomized controlled trial; Pediatrics; Antibody; Internal medicine; Pertussis toxin; Immune system","score_opus":0.003087364776876798,"score_gpt":0.20771240363343074,"score_spread":0.20462503885655395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793884390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917363,0.0055016987,0.00001827637,0.000109167675,0.0010436709,0.0015198218,0.000030414432,0.000007937582,0.00003272797],"genre_scores_gemma":[0.99653304,0.002934966,0.000009813117,0.000022385031,0.00032330942,0.00003882427,0.0000017369557,0.000013801824,0.00012211683],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99768627,0.0009002155,0.0010288866,0.00013934539,0.000075512515,0.00016975438],"domain_scores_gemma":[0.99726504,0.00042539366,0.0015828018,0.00027095302,0.00043210847,0.000023705688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010073851,0.00018490717,0.0010600869,0.000081662554,0.00014510748,0.000013969778,0.00018784503,0.00016914976,0.00026646946],"category_scores_gemma":[0.00060527766,0.00008967901,0.0010264998,0.00040901138,0.00016888262,0.00011343023,0.00009761565,0.00024724525,0.0000013053453],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.90347177,0.0007510929,0.09068926,0.00007985417,0.0010022019,4.4727875e-7,0.0008922052,0.000016067299,0.0025934214,0.000008905582,0.00018171694,0.00031309275],"study_design_scores_gemma":[0.9039846,0.0010315628,0.09176421,0.000104164,0.0022535843,0.00015223703,0.000091877126,0.000017387645,0.00023852102,0.00007380611,0.00015120525,0.00013685199],"about_ca_topic_score_codex":0.00012460319,"about_ca_topic_score_gemma":0.00005062084,"teacher_disagreement_score":0.0047967616,"about_ca_system_score_codex":0.00007251958,"about_ca_system_score_gemma":0.00019341873,"threshold_uncertainty_score":0.36570036},"labels":[],"label_agreement":null},{"id":"W2793952243","doi":"10.14745/ccdr.v39i00a01","title":"UPDATE ON THE USE OF QUADRIVALENT CONJUGATE MENINGOCOCCAL VACCINES","year":2013,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Conjugate; Meningococcal vaccine; Medicine; Virology; Immunology; Immunization; Antigen; Mathematics","score_opus":0.03803255946850766,"score_gpt":0.2339019133606984,"score_spread":0.19586935389219073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793952243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994299,0.00049151434,0.000004667538,0.0038223357,0.0005301357,0.0003462475,0.00005827724,0.0000310923,0.0004167612],"genre_scores_gemma":[0.99712366,0.00011914283,0.000014306623,0.00051380537,0.000017215374,0.000091725604,0.00017694237,0.000014655702,0.0019285647],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989089,0.00023437531,0.0004229062,0.00016326692,0.000031579424,0.00023901273],"domain_scores_gemma":[0.99791336,0.00027116,0.0002260247,0.0013293279,0.00019501471,0.00006511955],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001373009,0.00015339734,0.0002548467,0.000033361055,0.00029356274,0.000031514748,0.00029958572,0.00005640614,0.0024892492],"category_scores_gemma":[0.0002542707,0.00010093788,0.00008453006,0.00009780761,0.000084366104,0.00010607314,0.00017346287,0.00020141891,0.00004940509],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033411375,0.00051856285,0.09202406,0.000061029474,0.0009094062,0.00006792733,0.000052204618,0.00027671695,0.087341815,0.007270619,0.80909175,0.0020518228],"study_design_scores_gemma":[0.00038729497,0.000038640086,0.102584705,0.00005580611,0.00007626203,0.0000822524,0.00006250296,0.000037706068,0.0058451593,0.000100823265,0.8905353,0.00019354894],"about_ca_topic_score_codex":0.46134,"about_ca_topic_score_gemma":0.091366075,"teacher_disagreement_score":0.36997393,"about_ca_system_score_codex":0.00005404918,"about_ca_system_score_gemma":0.00043220716,"threshold_uncertainty_score":0.9984226},"labels":[],"label_agreement":null},{"id":"W2794105727","doi":"10.1016/j.vaccine.2018.01.047","title":"Cost-effectiveness of a potential vaccine candidate for Haemophilus influenzae serotype ‘a’","year":2018,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; Canada Foundation for Innovation","keywords":"Vaccination; Haemophilus influenzae; Conjugate vaccine; Medicine; Incidence (geometry); Immunization; Disease burden; Cost effectiveness; Population; Environmental health; Immunology; Biology; Antibody; Microbiology; Antibiotics","score_opus":0.02312420031889118,"score_gpt":0.2954368076640248,"score_spread":0.27231260734513363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794105727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937144,0.00038540806,0.0019852903,0.00014463627,0.002396711,0.001019077,0.00014466482,0.000079637786,0.00013015556],"genre_scores_gemma":[0.99880254,0.000029542574,0.00011441825,0.0000517768,0.00032843908,0.0000823415,0.00019557364,0.000026266667,0.00036907656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998879,0.00013757734,0.00034980668,0.00029050605,0.0000140387865,0.00032907655],"domain_scores_gemma":[0.99892884,0.00013022199,0.0001601365,0.00033546457,0.00041730746,0.000028033954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003477999,0.00020129557,0.00044027233,0.00016150442,0.00020291383,0.000012101975,0.00016734886,0.00021839705,0.0007466014],"category_scores_gemma":[0.00009982634,0.00016656675,0.00011936413,0.00023705434,0.000020528723,0.00011470915,0.0000860421,0.000111221605,0.00015609516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043938793,0.00018356372,0.009288482,0.00010407991,0.000316004,6.7669833e-7,0.000054167944,0.000014207614,0.9768351,0.0005486706,0.005086778,0.0031744174],"study_design_scores_gemma":[0.010051129,0.0018471156,0.18004155,0.00010034136,0.00018699371,0.00010597796,0.000022193055,0.000030836618,0.7044354,0.00051877764,0.102358095,0.00030155492],"about_ca_topic_score_codex":0.0005212567,"about_ca_topic_score_gemma":0.00017558449,"teacher_disagreement_score":0.27239963,"about_ca_system_score_codex":0.000029756957,"about_ca_system_score_gemma":0.000051707502,"threshold_uncertainty_score":0.81747615},"labels":[],"label_agreement":null},{"id":"W2794439017","doi":"10.1093/pch/pxx162","title":"Update on invasive meningococcal vaccination for Canadian children and youth","year":2018,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Paediatric Society","funders":"","keywords":"Medicine; Meningococcal disease; Neisseria meningitidis; Vaccination; Meningococcal vaccine; Meningitis; Booster dose; Fulminant; Pediatrics; Immunization; Bacterial meningitis; Booster (rocketry); Routine immunization; Virology; Immunology; Measles; Biology","score_opus":0.012590321419907343,"score_gpt":0.2535750452338405,"score_spread":0.24098472381393315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794439017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98882055,0.0015408889,0.00009898966,0.005552,0.001507506,0.00088718167,0.0008870044,0.00006445178,0.00064143026],"genre_scores_gemma":[0.99562216,0.0008172855,0.00007291434,0.0016706426,0.00074902753,0.000017598255,0.0009873979,0.000017317741,0.000045670025],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902797,0.0000751737,0.0002161612,0.00026900673,0.000011718165,0.00039999373],"domain_scores_gemma":[0.999485,0.00006211533,0.00011702979,0.00014383819,0.000094904186,0.00009711147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028573294,0.00013442528,0.00018677636,0.00025878253,0.0008613389,0.000024632554,0.0000799911,0.00016190603,0.000119123106],"category_scores_gemma":[0.00010158499,0.00012208446,0.000039757033,0.00016342742,0.000025840323,0.00006158336,0.000024577732,0.00016751415,0.00010881756],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011873401,0.00082198286,0.42344773,0.0002084564,0.0008201794,6.878925e-7,0.015782146,0.00000846143,0.0018599484,0.08749358,0.2111543,0.25721517],"study_design_scores_gemma":[0.003392715,0.0018398026,0.9441834,0.000028088758,0.00007076871,0.00004185167,0.0001394631,0.000003448764,0.0013689325,0.00052740594,0.048025776,0.00037835675],"about_ca_topic_score_codex":0.031279188,"about_ca_topic_score_gemma":0.060838487,"teacher_disagreement_score":0.5207357,"about_ca_system_score_codex":0.00009521049,"about_ca_system_score_gemma":0.0002425893,"threshold_uncertainty_score":0.9751716},"labels":[],"label_agreement":null},{"id":"W2794639105","doi":"10.1126/scitranslmed.aaj1748","title":"The impact of past vaccination coverage and immunity on pertussis resurgence","year":2018,"lang":"en","type":"article","venue":"Science Translational Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Immunity; Vaccination; Medicine; Immunology; Pertussis vaccine; Herd immunity; Virology; Immune system; Immunization","score_opus":0.022139652650546807,"score_gpt":0.3237728754423739,"score_spread":0.3016332227918271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794639105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99454933,0.00026578212,0.00016701894,0.0017170712,0.00049886154,0.000089628826,0.00001061482,0.000009579193,0.0026921069],"genre_scores_gemma":[0.9996784,0.0000915683,0.000007517363,0.000017663244,0.00008382799,0.0000026776997,0.000008514225,0.0000020368288,0.000107841464],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994866,0.000058218135,0.00016303181,0.00012172637,0.000041431915,0.00012898482],"domain_scores_gemma":[0.9992791,0.00029385116,0.000064117936,0.0001306688,0.00021508172,0.00001718791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074011943,0.00006493472,0.000092569775,0.00010021762,0.000665321,0.000008279234,0.000118980366,0.000029337538,0.0005599733],"category_scores_gemma":[0.00018089407,0.000033197204,0.000023943765,0.00034747433,0.0009292863,0.000120857265,0.000010896098,0.000078751305,0.000011708106],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028121215,0.00005150401,0.02381624,0.0000029838034,0.000029600436,5.5215022e-8,0.0008625523,0.000009388826,0.9223114,0.0066915615,0.00064102863,0.04530245],"study_design_scores_gemma":[0.000543952,0.0006298861,0.9865613,0.00002302544,0.0000073788547,0.000012131706,0.000052187756,0.000044916298,0.0094606215,0.0013322382,0.0012885204,0.00004384124],"about_ca_topic_score_codex":0.00035458137,"about_ca_topic_score_gemma":0.00003571572,"teacher_disagreement_score":0.9627451,"about_ca_system_score_codex":0.000014476641,"about_ca_system_score_gemma":0.0000746967,"threshold_uncertainty_score":0.6131315},"labels":[],"label_agreement":null},{"id":"W2795376845","doi":"10.1016/j.anai.2018.01.014","title":"Late presentation of subtotal C6 deficiency in a patient with recurrent Neisseria meningitides infections","year":2018,"lang":"en","type":"article","venue":"Annals of Allergy Asthma & Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Manitoba","funders":"","keywords":"Serotype; Neisseria meningitidis; Complement (music); Immunology; Medicine; Infectious disease (medical specialty); Microbiology; Meningococcal disease; Complement deficiency; Neisseria; Complement system; Disease; Virology; Biology; Bacteria; Immune system; Internal medicine; Gene; Genetics","score_opus":0.01963617428128053,"score_gpt":0.2756089949476047,"score_spread":0.2559728206663242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795376845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959653,0.0016699891,0.00004929411,0.00022177183,0.00068223354,0.00016553099,0.000016845403,0.000029596687,0.0011994332],"genre_scores_gemma":[0.99930525,0.0003937601,0.00005446851,0.000017625898,0.000026072583,0.0000293129,0.000055478937,0.000013019103,0.00010499575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998699,0.0002044112,0.0005069909,0.00023897887,0.000018388955,0.00033223195],"domain_scores_gemma":[0.998961,0.00007081991,0.00033222832,0.00025472132,0.0003684374,0.000012850786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013418548,0.00016774533,0.00035114525,0.00032273706,0.00010743678,0.0000065421727,0.00012757718,0.000186189,0.0005225139],"category_scores_gemma":[0.000059591628,0.0001447252,0.00007680631,0.00037259996,0.00037770686,0.00016297807,0.00008268456,0.00016904273,0.000038908725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018864138,0.0012754903,0.0020732668,0.000020328898,0.0005724705,0.0000022671975,0.001945615,0.00009203196,0.9716265,0.0075616622,0.00048101836,0.012462941],"study_design_scores_gemma":[0.0022885406,0.01310384,0.34879524,0.00016772996,0.000006251509,0.00025570087,0.00072333065,0.000011314523,0.5776409,0.00055682985,0.056095563,0.0003547956],"about_ca_topic_score_codex":0.001212319,"about_ca_topic_score_gemma":0.0015432286,"teacher_disagreement_score":0.39398563,"about_ca_system_score_codex":0.000011214944,"about_ca_system_score_gemma":0.0000642621,"threshold_uncertainty_score":0.59017223},"labels":[],"label_agreement":null},{"id":"W2796484035","doi":"10.1128/iai.00285-18","title":"A Novel Sialylation Site on Neisseria gonorrhoeae Lipooligosaccharide Links Heptose II Lactose Expression with Pathogenicity","year":2018,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Microbiology; Sialic acid; Neuraminidase; Epitope; Neisseria gonorrhoeae; Lactose; Biology; Heptose; Virulence factor; N-Acetylneuraminic acid; Virulence; Mucin; Mutant; Biochemistry; Antibody; Immunology; Enzyme","score_opus":0.01492038998072787,"score_gpt":0.24567542684721272,"score_spread":0.23075503686648485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796484035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99663705,0.00006696159,0.00085821765,0.0000752299,0.0010177383,0.00023199191,0.000032543547,0.00016526395,0.00091498095],"genre_scores_gemma":[0.99892527,0.00009784875,0.000052748368,0.00013158284,0.00018744651,0.000023829169,0.00012758902,0.00001800677,0.0004356669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999089,0.00016055681,0.00023808131,0.00026664807,0.000011399974,0.000234341],"domain_scores_gemma":[0.99925673,0.00006293406,0.00015476494,0.00031899856,0.00016910276,0.000037454138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002149326,0.00022027244,0.00021891975,0.00015363294,0.0011871322,0.000052439656,0.00006034204,0.0004081862,0.0006715453],"category_scores_gemma":[0.0000751518,0.00017178088,0.000058891233,0.00021969255,0.0001359577,0.000291526,0.00010555254,0.0005482314,0.00018657258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064832944,0.00036841893,0.015612982,0.000009238158,0.000046294317,6.153835e-8,0.00045414548,0.0000038147477,0.9770174,0.00009460174,0.00017276501,0.0055719595],"study_design_scores_gemma":[0.0025862474,0.003297963,0.41705546,0.0001207704,0.0000626634,0.00014650787,0.0000783478,0.000028395647,0.53184694,0.000042908458,0.044358894,0.00037487043],"about_ca_topic_score_codex":0.002374069,"about_ca_topic_score_gemma":0.0008276458,"teacher_disagreement_score":0.44517043,"about_ca_system_score_codex":0.000036309568,"about_ca_system_score_gemma":0.000033378783,"threshold_uncertainty_score":0.9130581},"labels":[],"label_agreement":null},{"id":"W2796633153","doi":"10.7939/r3833n30q","title":"Antigenic variation in bordetella pertussis","year":2001,"lang":"en","type":"article","venue":"Library and Archives Canada (Government of Canada)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bordetella pertussis; Antigenic variation; Antigen; Microbiology; Pertactin; Biology; Virology; Bacteria; Immunology; Pertussis toxin; Genetics","score_opus":0.0032206376355075057,"score_gpt":0.14714306639841668,"score_spread":0.14392242876290917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796633153","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9467697,0.00040327807,0.000020418063,0.0017596157,0.0003589334,0.00007267433,0.000033837547,0.0000065778263,0.050574962],"genre_scores_gemma":[0.99248666,0.00040675077,0.00004811783,0.000228396,0.000022118487,0.000003401747,0.00000764031,0.000006630768,0.006790289],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99940246,0.000054559867,0.00017817316,0.00013140106,0.00005985907,0.00017354845],"domain_scores_gemma":[0.9997199,0.00009297108,0.00006188099,0.000096973,2.8267613e-7,0.000027962642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000007044978,0.000089777095,0.00014093463,0.000024221787,0.00009442656,0.0000068311256,0.00007370329,0.000032789136,0.0002642446],"category_scores_gemma":[0.0000025287509,0.00008226323,0.000014816324,0.00007361344,0.000024649262,0.0001513892,0.000043513002,0.00007947504,1.0050043e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035462866,0.000042597734,0.1592096,0.00002086025,0.000058023248,0.00001028306,0.00007290673,0.000013731586,0.8168413,0.013214144,0.00041999618,0.009741933],"study_design_scores_gemma":[0.0005507175,0.00005505365,0.8013192,0.000030108515,0.0000105103445,0.000023247074,0.00037978654,0.00006821599,0.09220482,0.0002939374,0.10491738,0.00014707098],"about_ca_topic_score_codex":0.011082307,"about_ca_topic_score_gemma":0.065521985,"teacher_disagreement_score":0.7246365,"about_ca_system_score_codex":0.0000033391293,"about_ca_system_score_gemma":0.00033757932,"threshold_uncertainty_score":0.995503},"labels":[],"label_agreement":null},{"id":"W2796957298","doi":"10.1136/archdischild-2017-314152","title":"Safety of meningococcal group B vaccination in hospitalised premature infants","year":2018,"lang":"en","type":"article","venue":"Archives of Disease in Childhood Fetal & Neonatal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Vaccination; Pediatrics; Cohort; Adverse effect; Meningitis; Internal medicine; Immunology","score_opus":0.004046758728298497,"score_gpt":0.22612022652081068,"score_spread":0.2220734677925122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796957298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975562,0.0007851197,0.000040292136,0.00007157778,0.0002952621,0.0003788456,0.00023187215,0.000021374824,0.0006194413],"genre_scores_gemma":[0.99939734,0.000062593674,0.000105852574,0.000011029372,0.000054495806,0.000017699213,0.00031062006,0.000013595907,0.000026770364],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988616,0.00013143056,0.0004728906,0.00026891934,0.00002828965,0.00023685822],"domain_scores_gemma":[0.9993991,0.00013209115,0.00016539458,0.00023976232,0.000027484797,0.000036160018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009097819,0.00016770794,0.0003066714,0.00028770047,0.000053460582,0.0000052858645,0.00020207067,0.00010395101,0.0002153975],"category_scores_gemma":[0.000109581306,0.00015367115,0.00012202196,0.00021492153,0.00016199745,0.00023285356,0.00013889982,0.00019769762,0.000010834025],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0116181085,0.0037880538,0.6173603,0.0002782751,0.00042034074,0.00001042037,0.009676441,0.000046414283,0.23444512,0.010051263,0.000073517556,0.11223176],"study_design_scores_gemma":[0.003613439,0.00033000208,0.98420393,0.00019638722,0.00002301759,0.0000051171687,0.00008549357,0.000024711926,0.009329519,0.0018060778,0.00023058879,0.0001517046],"about_ca_topic_score_codex":0.00017423522,"about_ca_topic_score_gemma":0.00019422182,"teacher_disagreement_score":0.36684367,"about_ca_system_score_codex":0.000011540657,"about_ca_system_score_gemma":0.000052015006,"threshold_uncertainty_score":0.6266528},"labels":[],"label_agreement":null},{"id":"W2799401033","doi":"10.17269/s41997-018-0074-1","title":"Predictors of pertussis outbreak in urban and rural municipalities of Saskatchewan, Canada","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Saskatchewan Health Quality Council; Ottawa Public Health; Saskatchewan Health; Saskatchewan Health Authority; University of Ottawa","funders":"","keywords":"Outbreak; Medicine; Epidemiology; Population; Demography; Environmental health; Residence; Incidence (geometry); Rural area; Public health; Rate ratio; Pediatrics; Virology; Internal medicine","score_opus":0.021305328452814073,"score_gpt":0.2409958059729461,"score_spread":0.21969047752013202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799401033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947346,0.001848004,0.0000023966904,0.0020020183,0.0010495973,0.00005106048,0.00014272821,0.0000013353527,0.00016827627],"genre_scores_gemma":[0.9993288,0.00003468044,0.00001143716,0.00015601733,0.00008861981,6.2344867e-7,0.000009261675,0.000005600821,0.0003649526],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988447,0.00020548192,0.0005357112,0.000055413664,0.000017923534,0.00034080152],"domain_scores_gemma":[0.9990521,0.000060697177,0.00030933696,0.00010535394,0.00023405469,0.00023846493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065267907,0.00007607597,0.0003283925,0.00031610136,0.0000862502,0.0000082048455,0.00011862438,0.000083107305,0.00027581543],"category_scores_gemma":[0.00016364652,0.00006402347,0.00003207878,0.00015981797,0.00022680224,0.000099488636,0.000010851395,0.00015384577,3.622662e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023707287,0.000032495445,0.9513856,0.00006813131,0.00017410635,0.0000023102593,0.020884354,5.8721986e-7,0.0017448714,0.0006601828,0.019031836,0.0059917904],"study_design_scores_gemma":[0.00097044586,0.00073719554,0.803224,0.00013161723,0.00001272122,0.00014346192,0.041700892,0.0000012392167,0.00056384306,0.000028466668,0.1523826,0.00010348011],"about_ca_topic_score_codex":0.9844929,"about_ca_topic_score_gemma":0.9986894,"teacher_disagreement_score":0.1481616,"about_ca_system_score_codex":0.0002214312,"about_ca_system_score_gemma":0.011603243,"threshold_uncertainty_score":0.9940001},"labels":[],"label_agreement":null},{"id":"W2800464467","doi":"10.1371/journal.pone.0195984","title":"Under-reporting of pertussis in Ontario: A Canadian Immunization Research Network (CIRN) study using capture-recapture","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Alberta Health; Provincial Laboratory of Public Health; Institute for Clinical Evaluative Sciences; University of Calgary; University of Alberta; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Emergency department; Public health surveillance; Public health; Mark and recapture; Pediatrics; Emergency medicine; Data source; Medical emergency; Environmental health; Population; Database","score_opus":0.15530735936613918,"score_gpt":0.3179440541430494,"score_spread":0.1626366947769102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800464467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99812126,0.00017024002,0.000008302756,0.000107960775,0.00028601708,0.00039388618,0.000003576729,0.000015290661,0.0008934897],"genre_scores_gemma":[0.9987058,0.0000037251298,0.0001381721,0.000022655298,0.00008916379,0.000013404112,0.00003241575,0.000014623342,0.0009800066],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99845606,0.00029603095,0.0005777266,0.0002030772,0.000034158882,0.00043297492],"domain_scores_gemma":[0.9989575,0.000060711787,0.00024713317,0.00027219972,0.00043458916,0.00002782905],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010497445,0.00009984433,0.00030889927,0.00026638122,0.0003706804,0.000018757217,0.000115109,0.00020505463,0.00095634995],"category_scores_gemma":[0.00027944258,0.00009278715,0.000028629078,0.0004929035,0.000087830085,0.00007760361,0.00006801867,0.00043359748,0.000027815118],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000651713,0.000917989,0.6768247,0.00000975008,0.00029041877,0.0000020433931,0.0036087325,0.000029434203,0.31796363,0.000084401654,0.00012503348,0.000078721074],"study_design_scores_gemma":[0.0011046726,0.00062107993,0.9781407,0.00035789778,0.00013955393,0.000016766573,0.0036311538,0.000060723098,0.014881285,0.00019467808,0.00060529175,0.000246194],"about_ca_topic_score_codex":0.9581745,"about_ca_topic_score_gemma":0.9929225,"teacher_disagreement_score":0.30308235,"about_ca_system_score_codex":0.00030151848,"about_ca_system_score_gemma":0.00046974613,"threshold_uncertainty_score":0.9999569},"labels":[],"label_agreement":null},{"id":"W2800969607","doi":"10.1093/pch/pxy040","title":"L’immunisation de l’enfant immunodéprimé : les principes fondamentaux","year":2018,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Paediatric Society","funders":"","keywords":"Humanities; Political science; Medicine; Philosophy","score_opus":0.017023295423662762,"score_gpt":0.2879314709862743,"score_spread":0.27090817556261154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800969607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7985392,0.1537889,0.0013454106,0.02659486,0.013512646,0.0007022958,0.0002518555,0.00019296596,0.005071861],"genre_scores_gemma":[0.93165296,0.05865189,0.0008662292,0.0015991759,0.00370352,0.00003226542,0.0002808367,0.00006284029,0.003150264],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99669224,0.00082395505,0.0008299361,0.00046981376,0.000045459463,0.0011385822],"domain_scores_gemma":[0.99838924,0.00019998917,0.00051492336,0.0005572856,0.0002063681,0.00013218856],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012844417,0.0003795658,0.00052145467,0.00028983073,0.002076638,0.00007737406,0.00031687313,0.0006470466,0.002786987],"category_scores_gemma":[0.00014880828,0.00038982366,0.00020688836,0.00048799574,0.00036632246,0.00021001308,0.00022340506,0.0008616771,0.0011281626],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081643835,0.0036891478,0.13475479,0.0013947526,0.001216815,0.000006867896,0.01946964,0.000018221157,0.042176265,0.10495594,0.08708986,0.60441124],"study_design_scores_gemma":[0.0014646141,0.0010786712,0.15738417,0.00016650162,0.00011238639,0.00024765474,0.00044870249,0.000018688217,0.0019672709,0.0005058561,0.83621883,0.00038664445],"about_ca_topic_score_codex":0.010099246,"about_ca_topic_score_gemma":0.0005883685,"teacher_disagreement_score":0.749129,"about_ca_system_score_codex":0.0006499453,"about_ca_system_score_gemma":0.00081194076,"threshold_uncertainty_score":0.99985534},"labels":[],"label_agreement":null},{"id":"W2801336771","doi":"10.1016/s2352-4642(18)30135-4","title":"Reassuring safety data from the UK multicomponent meningococcal group B vaccine (4CMenB) programme","year":2018,"lang":"en","type":"letter","venue":"The Lancet Child & Adolescent Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"","keywords":"Medicine; Vaccine safety; Vaccination; Pediatrics; Population; Meningococcal vaccine; Prospective cohort study; Family medicine; Environmental health; Immunization; Surgery; Virology","score_opus":0.06950189879624692,"score_gpt":0.2992250287083367,"score_spread":0.22972312991208982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801336771","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011670203,0.0070552304,0.00018493645,0.9684561,0.0070807943,0.0021623445,0.0028569466,0.00033536713,0.00019806571],"genre_scores_gemma":[0.09963603,0.005771241,0.00023967554,0.7588808,0.08811705,0.00011877505,0.046567086,0.00021509269,0.00045427174],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99491,0.0017111112,0.0008897433,0.0009939086,0.00008317294,0.0014120339],"domain_scores_gemma":[0.99537486,0.00041040665,0.00070352526,0.0033863545,0.00006955542,0.000055293902],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019418391,0.0006236477,0.0011746567,0.000059541268,0.0014833936,0.0001230978,0.002357425,0.0006551805,0.0004274432],"category_scores_gemma":[0.00009061899,0.0003409595,0.00017093316,0.00016023817,0.000176737,0.00008316741,0.0012022724,0.00516372,0.0004535674],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043246933,0.00016924168,0.0035973531,0.000099395525,0.0004374498,0.0000022376275,0.00019901092,3.9128804e-7,0.00039881526,0.000039751474,0.9898818,0.0047420813],"study_design_scores_gemma":[0.0022041022,0.00012366248,0.07116179,0.00077453634,0.00013602905,0.00009255947,0.000033745237,0.000010564143,0.000032917116,0.000027774535,0.9250537,0.000348629],"about_ca_topic_score_codex":0.006725116,"about_ca_topic_score_gemma":0.002751185,"teacher_disagreement_score":0.20957534,"about_ca_system_score_codex":0.00019593346,"about_ca_system_score_gemma":0.00012053802,"threshold_uncertainty_score":0.9999042},"labels":[],"label_agreement":null},{"id":"W2802327915","doi":"10.14745/ccdr.v40is3a06","title":"The Canadian Immunization Monitoring Program, ACTive (IMPACT): Active surveillance for vaccine adverse events and vaccine-preventable diseases","year":2014,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Alberta; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; Stollery Children's Hospital; University of British Columbia","funders":"Michael Smith Health Research BC; Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Immunization; Active immunization; Adverse effect; Active monitoring; Vigilance (psychology); Immunization program; Vaccination; Pediatrics; Intensive care medicine; Immunology; Internal medicine; Psychology; Antibody","score_opus":0.008985624628594327,"score_gpt":0.2655930986951889,"score_spread":0.25660747406659457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802327915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99420476,0.0020904753,0.000016210854,0.0008027857,0.0010493709,0.0011223917,0.000439877,0.000067815774,0.00020633769],"genre_scores_gemma":[0.99737453,0.00027763535,0.000024145787,0.000028547014,0.000073886666,0.00036107743,0.0011582655,0.000031842916,0.00067008496],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99849766,0.00028858604,0.0003615145,0.00027947343,0.00004274054,0.00053000724],"domain_scores_gemma":[0.9978219,0.00036271897,0.0002626231,0.0009541644,0.0003422824,0.0002562755],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0002761256,0.0002448554,0.00032568013,0.00006235725,0.0020447613,0.000040303952,0.00031903115,0.00009521036,0.000047796562],"category_scores_gemma":[0.0006217079,0.0001919398,0.00010163118,0.00018064892,0.000038211074,0.00019282155,0.00014315976,0.00021047807,0.0000018444209],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012559522,0.00023529239,0.9531549,0.000065423876,0.00094588165,0.000012591881,0.000059115995,0.00017611567,0.001485771,0.00015821344,0.0073457225,0.03510501],"study_design_scores_gemma":[0.0010179525,0.00007359723,0.820894,0.000044396904,0.00010616799,0.00004437004,0.0001629656,0.000070208225,0.0004540215,0.000111488785,0.1767868,0.00023404365],"about_ca_topic_score_codex":0.8855918,"about_ca_topic_score_gemma":0.97029454,"teacher_disagreement_score":0.16944107,"about_ca_system_score_codex":0.0005563201,"about_ca_system_score_gemma":0.0017294115,"threshold_uncertainty_score":0.99925447},"labels":[],"label_agreement":null},{"id":"W2803394252","doi":"10.1101/330480","title":"A competence-regulated toxin-antitoxin system in <i>Haemophilus influenzae</i>","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Antitoxin; Biology; Gene; Operon; Transcription (linguistics); Mutant; Toxin; Genetics; Microbiology; DNA; Cell biology","score_opus":0.013250830285389089,"score_gpt":0.2193417329608474,"score_spread":0.20609090267545832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803394252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884278,0.0018761255,0.000073957075,0.000082787294,0.0076365783,0.0008307007,0.00030975087,0.0007221818,0.00004012273],"genre_scores_gemma":[0.99860317,0.00010378241,0.00032674556,0.00009258511,0.00055251084,0.00018954494,0.000002482415,0.000112991765,0.00001620678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966565,0.0003841103,0.0009710098,0.0011205189,0.00005847483,0.0008094233],"domain_scores_gemma":[0.99737304,0.00007913338,0.00052078563,0.00144264,0.0004952684,0.00008915691],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006108544,0.00072180136,0.0010478771,0.0005461547,0.0002633568,0.00015335543,0.00069395424,0.0015445594,0.00023575564],"category_scores_gemma":[0.000116331925,0.00073068653,0.0002154238,0.0006881886,0.00026272546,0.00016599224,0.00069195154,0.0010822956,0.0010278504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109110704,0.0001863434,0.011876524,0.00037114052,0.0002753871,0.000023055765,0.000012021737,0.000021920387,0.9853097,0.0007273617,0.0010855191,0.0000018813938],"study_design_scores_gemma":[0.002455804,0.00018849252,0.19601835,0.0018214539,0.00019156047,6.483699e-7,0.000010115097,0.00006788595,0.7490222,0.0000028424001,0.04876025,0.0014604218],"about_ca_topic_score_codex":0.0005938403,"about_ca_topic_score_gemma":0.000028415414,"teacher_disagreement_score":0.23628756,"about_ca_system_score_codex":0.00039139052,"about_ca_system_score_gemma":0.00045004857,"threshold_uncertainty_score":0.9997516},"labels":[],"label_agreement":null},{"id":"W2803851177","doi":"10.1007/s10534-018-0105-7","title":"Are lactoferrin receptors in Gram-negative bacteria viable vaccine targets?","year":2018,"lang":"en","type":"article","venue":"BioMetals","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Lactoferrin; Neisseria meningitidis; Transferrin; Bacterial outer membrane; Microbiology; Biology; Neisseria; Transferrin receptor; Moraxella catarrhalis; Receptor; Bacteria; Streptococcus pneumoniae; Antibiotics; Biochemistry; Escherichia coli; Gene","score_opus":0.022034180244580762,"score_gpt":0.2700934211247173,"score_spread":0.24805924088013653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803851177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943606,0.0003382641,0.000021270269,0.00026224172,0.003792472,0.000230681,0.00005311199,0.000090592046,0.0008507358],"genre_scores_gemma":[0.9947193,0.000044176533,0.00016689379,0.00009758536,0.00020989728,0.00003610965,0.000074567026,0.000020284244,0.004631173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987889,0.00017198443,0.00033364125,0.0003151928,0.000013125835,0.0003771373],"domain_scores_gemma":[0.9993288,0.00006879557,0.00020439972,0.00025822275,0.00011261755,0.000027152337],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024618176,0.0001997307,0.0003783578,0.00037430826,0.00014679211,0.000029750427,0.00015328197,0.00025102354,0.011674052],"category_scores_gemma":[0.00017062525,0.00016412238,0.00007630124,0.0006592949,0.00008873585,0.00018114378,0.00008755531,0.00015305472,0.0023632222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017043909,0.00018233154,0.022724515,0.000009470863,0.00011973454,0.000001117651,0.0001399972,7.3442806e-8,0.9624479,0.00014818186,0.012604769,0.0014514686],"study_design_scores_gemma":[0.0012376516,0.00023235515,0.161522,0.00003168628,0.00001952293,0.000015740412,0.00013045153,5.716658e-7,0.44761133,0.00025797423,0.38871312,0.00022759513],"about_ca_topic_score_codex":0.0006299418,"about_ca_topic_score_gemma":0.00067149254,"teacher_disagreement_score":0.51483655,"about_ca_system_score_codex":0.0000455275,"about_ca_system_score_gemma":0.000021466505,"threshold_uncertainty_score":0.99841356},"labels":[],"label_agreement":null},{"id":"W2805620904","doi":"10.14745/ccdr.v43i78a01f","title":"Augmentation des infections invasives à Neisseria meningitidis de sérogroupe W au Canada de 2009 à 2016","year":2017,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Microbiology; Neisseriaceae; Medicine; Biology; Bacteria; Antibiotics","score_opus":0.014466159820902706,"score_gpt":0.23847701681798072,"score_spread":0.224010856997078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805620904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9649304,0.020830564,0.000636194,0.002245323,0.0042961836,0.00032629285,0.000635592,0.00005539856,0.006044062],"genre_scores_gemma":[0.9626487,0.01898632,0.0003581108,0.00012868925,0.00054619915,0.000075274584,0.00012582364,0.000067714944,0.017063169],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969235,0.00034112157,0.0005881972,0.0004933874,0.000056877467,0.0015968961],"domain_scores_gemma":[0.9982183,0.00030227526,0.00034065987,0.0005807199,0.00021677242,0.00034127547],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028939027,0.00055207935,0.0005698621,0.00012287915,0.004979947,0.00021393418,0.000464732,0.0004178814,0.002134549],"category_scores_gemma":[0.00024254671,0.00058353855,0.00017373342,0.0001847537,0.00097294856,0.0006137222,0.000067773246,0.00045434426,0.000012427928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00044160138,0.00042662927,0.7083224,0.0049346266,0.0027817655,0.0001363,0.0032041292,0.00082025,0.16829555,0.0039149094,0.054777067,0.051944785],"study_design_scores_gemma":[0.0014567641,0.00033282503,0.7290478,0.00285942,0.0005079808,0.00068394863,0.001060492,0.000031484153,0.031210626,0.00045310872,0.23160401,0.0007515957],"about_ca_topic_score_codex":0.9995702,"about_ca_topic_score_gemma":0.99996793,"teacher_disagreement_score":0.17682694,"about_ca_system_score_codex":0.0043002204,"about_ca_system_score_gemma":0.019552164,"threshold_uncertainty_score":0.9996616},"labels":[],"label_agreement":null},{"id":"W2809387581","doi":"10.1371/journal.pone.0197970","title":"Acellular pertussis vaccines effectiveness over time: A systematic review, meta-analysis and modeling study","year":2018,"lang":"en","type":"review","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); Public Health Ontario; York University; University of Toronto","funders":"Sanofi","keywords":"Medicine; Population; Booster (rocketry); Pertussis vaccine; Booster dose; Meta-analysis; Pediatrics; Whooping cough; Incidence (geometry); Immunology; Vaccination; Internal medicine; Immunization; Environmental health; Immune system","score_opus":0.1357221644240806,"score_gpt":0.32315915596430467,"score_spread":0.18743699154022406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809387581","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025663527,0.99209625,0.00003461658,0.000007797528,0.00008236245,0.0050275237,0.000088147644,0.00008415411,0.000012816441],"genre_scores_gemma":[0.0005160025,0.9958402,0.000020053667,0.000015580044,0.00005553599,0.0018751305,0.00023888258,0.00006112111,0.0013775247],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99470156,0.0029514686,0.0012087236,0.00078009674,0.000057386977,0.00030075645],"domain_scores_gemma":[0.997456,0.00057693355,0.0006167123,0.0010271602,0.00028756628,0.00003562458],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001572956,0.0006918521,0.011847138,0.00048030735,0.00024343141,0.000061006474,0.00029950924,0.00042639446,0.0018829044],"category_scores_gemma":[0.00039570947,0.00041858244,0.002061146,0.00082411413,0.000030438907,0.00010167073,0.00022090584,0.00033509653,0.0006307397],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006955801,0.0012987332,0.000007555819,0.5087285,0.48967177,0.0000011139149,0.00002000769,1.18344076e-7,0.00014589338,0.0000012261668,0.00002601819,0.000092089314],"study_design_scores_gemma":[0.00021312754,0.00022447726,0.0000020677994,0.07534406,0.9227227,0.000015803544,0.0000048154498,0.00002458731,0.000017703864,0.000002197913,0.0010114313,0.00041703015],"about_ca_topic_score_codex":0.00010211347,"about_ca_topic_score_gemma":0.000017693495,"teacher_disagreement_score":0.43338448,"about_ca_system_score_codex":0.000048123304,"about_ca_system_score_gemma":0.000042307543,"threshold_uncertainty_score":0.9998266},"labels":[],"label_agreement":null},{"id":"W2810652738","doi":"10.1016/s1473-3099(18)30287-1","title":"Viral meningitis in the UK: time to speed up","year":2018,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Virology; Meningitis; Medicine; Viral meningitis; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Bacterial meningitis; Pediatrics; Internal medicine; Infectious disease (medical specialty); Outbreak","score_opus":0.01643672226513262,"score_gpt":0.254778006474477,"score_spread":0.2383412842093444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810652738","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62826526,0.0012341258,0.000006329886,0.34481657,0.0066440115,0.0015545354,0.0012972477,0.0005521116,0.015629811],"genre_scores_gemma":[0.3503111,0.00013346472,0.0000026435528,0.5969116,0.022506086,0.00034204544,0.00203828,0.000112037065,0.027642732],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981251,0.00059992773,0.00028370987,0.000354202,0.000038515103,0.00059854396],"domain_scores_gemma":[0.99861306,0.0003799642,0.00013668953,0.00078484137,0.00006936163,0.000016079488],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024391241,0.00034736414,0.0005644285,0.00015545909,0.00037788023,0.0001320255,0.000631396,0.00044686932,0.0065320525],"category_scores_gemma":[0.0001415841,0.00019709971,0.00018909373,0.000263524,0.00017656296,0.000056946898,0.00015013097,0.0009600331,0.008449372],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072299794,0.000044669043,0.0021922342,0.000017272207,0.0001605705,0.000010860842,0.00019964343,0.0000018083193,0.0017451703,0.000027708998,0.99508893,0.00043880206],"study_design_scores_gemma":[0.0007843773,0.00025205815,0.008801951,0.000061783336,0.00016956149,0.00016158084,0.000013361685,4.7284476e-7,0.00016745023,0.0005036985,0.9887893,0.0002943914],"about_ca_topic_score_codex":0.0005243362,"about_ca_topic_score_gemma":0.00008970619,"teacher_disagreement_score":0.27795416,"about_ca_system_score_codex":0.000061027058,"about_ca_system_score_gemma":0.00005381683,"threshold_uncertainty_score":0.9943761},"labels":[],"label_agreement":null},{"id":"W2811081952","doi":"10.1097/inf.0000000000002132","title":"Coverage of Haemophilus influenzae Type b Conjugate Vaccine for Children in Mainland China","year":2018,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Hib vaccine; Confidence interval; Conjugate vaccine; Meta-analysis; Subgroup analysis; Haemophilus influenzae; Population; Pediatrics; Random effects model; China; Internal medicine; Immunology; Immunization; Environmental health; Antigen; Geography; Microbiology","score_opus":0.014652348513214347,"score_gpt":0.28326365679903887,"score_spread":0.2686113082858245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2811081952","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1486223,0.8469738,0.000025090714,0.00002513762,0.0028112985,0.0010842648,0.00035299256,0.000029737283,0.00007537915],"genre_scores_gemma":[0.014225821,0.98309547,0.0000031148395,0.000028509765,0.002191348,0.000054730863,0.00015591049,0.000057188758,0.00018791138],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977104,0.00049571064,0.0010341104,0.0002797404,0.000034073884,0.000445959],"domain_scores_gemma":[0.9979546,0.00033955954,0.0010371002,0.00038653493,0.0002064579,0.000075752476],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006884539,0.00044056753,0.0012796107,0.0005327425,0.00040360118,0.000054523523,0.00035558143,0.00037602885,0.00040388122],"category_scores_gemma":[0.00040157366,0.00027395634,0.0006243155,0.00055469654,0.00005964415,0.00010284961,0.000116174786,0.0007785564,0.00012434478],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004547622,0.0040522683,0.43910688,0.021567822,0.008999433,0.000049055827,0.0005763435,0.00017003651,0.000050812185,0.00080785714,0.10845864,0.41161323],"study_design_scores_gemma":[0.007455675,0.0014566282,0.08670202,0.0017722113,0.009971539,0.0043453393,0.0000043911846,0.0000015890469,0.0000029847026,0.0029345618,0.8842008,0.001152224],"about_ca_topic_score_codex":0.0000802973,"about_ca_topic_score_gemma":0.000019144025,"teacher_disagreement_score":0.7757422,"about_ca_system_score_codex":0.00010500302,"about_ca_system_score_gemma":0.00058991555,"threshold_uncertainty_score":0.9999713},"labels":[],"label_agreement":null},{"id":"W2821199602","doi":"10.1016/j.ijid.2018.05.022","title":"Meningococcal carriage in high-risk settings: A systematic review","year":2018,"lang":"en","type":"review","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research","funders":"Sanofi Pasteur; China Scholarship Council","keywords":"Carriage; Hajj; Medicine; Epidemiology; Meningococcal disease; Outbreak; Vaccination; Meningococcal vaccine; Transmission (telecommunications); Family medicine; Environmental health; Neisseria meningitidis; Immunology; Virology; Internal medicine; Immunization; Geography; Pathology","score_opus":0.011115103725595883,"score_gpt":0.30398425507741095,"score_spread":0.29286915135181507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2821199602","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00083028723,0.992325,0.000016471453,0.000031698906,0.005659673,0.00071439595,0.00031858752,0.000035186018,0.000068681664],"genre_scores_gemma":[0.0014870176,0.9973618,0.0000054828292,0.0000828526,0.000685379,0.000102468184,0.00014344347,0.000037872276,0.00009367851],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99645233,0.0009821497,0.0020030693,0.0002494723,0.00008264131,0.00023034577],"domain_scores_gemma":[0.99553865,0.00053178077,0.0029463023,0.00025496742,0.0006773876,0.000050922015],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00066205574,0.0003977904,0.0025192364,0.00072064385,0.000079382,0.00007586056,0.0006091583,0.00028855188,0.00058270135],"category_scores_gemma":[0.0020575752,0.00027825142,0.0010103306,0.00026105193,0.00007834806,0.00019861724,0.00012427989,0.0006141246,0.00027951118],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011939541,0.0015414758,0.0016611583,0.8797715,0.014719693,0.00022513125,0.0001577457,0.000002754858,0.000020624226,0.0003350022,0.029583838,0.0718617],"study_design_scores_gemma":[0.001001718,0.0002784925,0.000059059075,0.64246374,0.006055594,0.0029800385,0.000014296929,1.2841538e-7,0.0000031656361,0.00011210553,0.34668854,0.0003430869],"about_ca_topic_score_codex":0.000105711406,"about_ca_topic_score_gemma":0.000027679804,"teacher_disagreement_score":0.3171047,"about_ca_system_score_codex":0.00034676155,"about_ca_system_score_gemma":0.0003343797,"threshold_uncertainty_score":0.999967},"labels":[],"label_agreement":null},{"id":"W2883431678","doi":"10.14745/ccdr.v41is3a05","title":"Summary of the National Advisory Committee on Immunization’s Update on quadrivalent meningococcal vaccines available in Canada","year":2015,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Ministry of Health","funders":"","keywords":"Toxoid; Medicine; Immunogenicity; Meningococcal disease; Meningococcal vaccine; Immunization; Vaccination; Conjugate vaccine; Tetanus; Advisory committee; Booster dose; Immunology; Pediatrics; Neisseria meningitidis; Antibody; Political science","score_opus":0.026430694542554013,"score_gpt":0.24131549871888333,"score_spread":0.21488480417632932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883431678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98552084,0.0014161805,6.50178e-7,0.002377571,0.0013032967,0.0002984734,0.0002037538,0.000017425233,0.008861831],"genre_scores_gemma":[0.99557585,0.000078282515,0.000005034777,0.0006379361,0.000021021538,0.000038951828,0.00038103203,0.000016715338,0.003245158],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998538,0.00036779026,0.00053404423,0.00019454201,0.00011788378,0.00024771364],"domain_scores_gemma":[0.99825543,0.00016745887,0.00026700282,0.0009185186,0.00031050327,0.00008109369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003521077,0.00017423376,0.0002878828,0.0000675111,0.00022118234,0.000009705705,0.0004946043,0.000059185102,0.00046211894],"category_scores_gemma":[0.00040200056,0.00013768779,0.00005438077,0.00024558714,0.00004628686,0.00006147686,0.00022804415,0.00031693667,0.00001248166],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034703588,0.00027500527,0.30819866,0.000025128,0.00013253474,0.00002718992,0.000022102773,0.0025462045,0.0012558212,0.000691436,0.6863515,0.00012742024],"study_design_scores_gemma":[0.0013579091,0.00004241349,0.23138742,0.00016391207,0.000036842837,0.00005354604,0.00017392363,0.00007611995,0.0019478739,0.000099209814,0.7643932,0.00026761804],"about_ca_topic_score_codex":0.99096394,"about_ca_topic_score_gemma":0.9965157,"teacher_disagreement_score":0.07804173,"about_ca_system_score_codex":0.0012015289,"about_ca_system_score_gemma":0.01190874,"threshold_uncertainty_score":0.9936928},"labels":[],"label_agreement":null},{"id":"W2883501202","doi":"10.1093/cid/ciy244","title":"A Randomized Controlled Trial of the Safety and Immunogenicity of Tetanus, Diphtheria, and Acellular Pertussis Vaccine Immunization During Pregnancy and Subsequent Infant Immune Response","year":2018,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Dalhousie University; Centre Hospitalier Universitaire Sainte-Justine; Women and Children’s Health Research Institute; University of Ottawa; University of Alberta; Université de Montréal; University of Calgary; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Alberta Children's Hospital; Alberta Health Services","funders":"","keywords":"Medicine; Tetanus; Diphtheria; Immunogenicity; Immunization; Pregnancy; Randomized controlled trial; Vaccination; Pediatrics; Immune system; Immunology; Surgery","score_opus":0.011965175366395726,"score_gpt":0.2784683290814367,"score_spread":0.26650315371504096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883501202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97980356,0.017141094,0.000032119664,0.00012045426,0.0007996487,0.0020049552,0.000039578357,0.000030802945,0.00002776026],"genre_scores_gemma":[0.99203473,0.007659146,0.000003240157,0.000009234617,0.00005943674,0.000081849605,0.00001404609,0.000014856588,0.00012344027],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9956671,0.002459553,0.0013932827,0.00027726282,0.00002900999,0.00017381767],"domain_scores_gemma":[0.9964825,0.0021234462,0.0007516542,0.00038938053,0.0002142056,0.000038844817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011015359,0.0002137355,0.0015119378,0.0000832733,0.00034416583,0.000020910331,0.00009894275,0.00022739757,0.0001666398],"category_scores_gemma":[0.0035867817,0.00012948758,0.0003868488,0.00014717071,0.0009598715,0.00009311399,0.0002354116,0.00016579426,0.0000011392001],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.8114331,0.0005219054,0.027305571,0.000048877027,0.00097435445,3.572492e-7,0.00015161441,4.6764742e-7,0.1584965,0.00010943541,0.0000024362776,0.0009554063],"study_design_scores_gemma":[0.70764506,0.0009383918,0.2820526,0.00022037922,0.00082892814,0.000022275959,0.00003169715,0.000012979337,0.007868943,0.00013048502,0.00010955875,0.00013867281],"about_ca_topic_score_codex":0.00017780083,"about_ca_topic_score_gemma":0.000016925182,"teacher_disagreement_score":0.25474703,"about_ca_system_score_codex":0.0000147507235,"about_ca_system_score_gemma":0.00007224937,"threshold_uncertainty_score":0.52803504},"labels":[],"label_agreement":null},{"id":"W2885983023","doi":"10.1371/journal.pone.0201282","title":"Characterization of natural bactericidal antibody against Haemophilus influenzae type a in Canadian First Nations: A Canadian Immunization Research Network (CIRN) Clinical Trials Network (CTN) study","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; National Research Council Canada; Lakehead University; NOSM University","funders":"Mitacs; Canadian Immunization Research Network; Bruce Power; Canadian Institutes of Health Research; Northern Ontario Academic Medicine Association","keywords":"Haemophilus influenzae; Population; Immunization; Antibody; Disease; Public health; Medicine; Immunology; Environmental health; Biology; Antibiotics; Microbiology; Internal medicine; Pathology","score_opus":0.1442820428570777,"score_gpt":0.38754518126425314,"score_spread":0.24326313840717542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885983023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955644,0.0002476853,0.0000023770447,0.00039033877,0.0018286876,0.0014693594,0.000070192036,0.000032394844,0.00039456037],"genre_scores_gemma":[0.99688023,0.0003299679,0.000041374224,0.00012280518,0.0010384534,0.00005247428,0.0013077002,0.000030944197,0.00019606136],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9951757,0.0023209138,0.0011986948,0.00036130307,0.000066327935,0.000877029],"domain_scores_gemma":[0.9972627,0.000692714,0.00030466705,0.00043068358,0.0011783798,0.0001308333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005417782,0.00019388151,0.000753731,0.0007803939,0.00096750224,0.0000625349,0.00028896992,0.00041084114,0.00047895208],"category_scores_gemma":[0.0037473217,0.00018997125,0.000069196925,0.002056753,0.00018584338,0.00022387222,0.00008884517,0.00058251835,0.00019394032],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057825854,0.0016707752,0.82294345,0.00003747129,0.0007990972,0.000005020133,0.00074875035,0.000021652822,0.17171682,0.00029276204,0.0004282552,0.0007577014],"study_design_scores_gemma":[0.001867267,0.0012485791,0.9860728,0.0004084356,0.000107780834,0.0000036273946,0.00011160804,0.00014740173,0.0012349788,0.000030363208,0.0084887305,0.00027847616],"about_ca_topic_score_codex":0.55621785,"about_ca_topic_score_gemma":0.98065877,"teacher_disagreement_score":0.42444095,"about_ca_system_score_codex":0.0002650363,"about_ca_system_score_gemma":0.0010265769,"threshold_uncertainty_score":0.7746803},"labels":[],"label_agreement":null},{"id":"W2887149460","doi":"10.1093/femsle/fny192","title":"Small extracellular particles with big potential for horizontal gene transfer: membrane vesicles and gene transfer agents","year":2018,"lang":"en","type":"review","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Horizontal gene transfer; Biogenesis; Extracellular; Gene transfer; Extracellular vesicles; Gene; Bacteria; Cell biology; Vesicle; Biology; Chemistry; Membrane; Biophysics; Genetics; Genome","score_opus":0.037349927673586886,"score_gpt":0.23808672736543784,"score_spread":0.20073679969185096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887149460","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4138987,0.57980114,0.0023155578,0.00015019254,0.0016747554,0.0011388389,0.0009376453,0.00008142222,0.0000017469862],"genre_scores_gemma":[0.01077614,0.9816537,0.0005065401,0.00024748818,0.0011558628,0.00044719147,0.004744111,0.0001965798,0.00027237227],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968959,0.0004176134,0.0007864014,0.0010166325,0.000012726806,0.00087073026],"domain_scores_gemma":[0.9991852,0.0001268658,0.00012659632,0.00042864526,0.00006765906,0.00006500405],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002747335,0.0008264942,0.0017509626,0.00024701483,0.00041992377,0.000055658358,0.00034332543,0.0010669023,0.00015240528],"category_scores_gemma":[0.000007930029,0.00061868265,0.00053952605,0.00015235879,0.00066506275,0.00006480659,0.000054984168,0.0004438629,0.00011487792],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026726545,0.000103654624,0.0000067731567,0.0009223962,0.0015645708,0.00001501189,0.000094510535,6.387655e-7,0.9066086,0.00001650794,0.0006296172,0.089770466],"study_design_scores_gemma":[0.002512251,0.00076222315,0.000014413764,0.0006092775,0.0021672787,0.0023644709,0.0000144495425,3.6220345e-7,0.12614097,0.0000026374705,0.8645888,0.00082284753],"about_ca_topic_score_codex":0.00008977792,"about_ca_topic_score_gemma":0.00012374044,"teacher_disagreement_score":0.8639592,"about_ca_system_score_codex":0.00005032943,"about_ca_system_score_gemma":0.000092116985,"threshold_uncertainty_score":0.99962646},"labels":[],"label_agreement":null},{"id":"W2887205293","doi":"10.14745/ccdr.v41i05a02f","title":"Déclaration concernant la méningococcie et les voyageurs internationaux","year":2015,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Humanities; Political science; Art","score_opus":0.030870382572328152,"score_gpt":0.26113706738145265,"score_spread":0.2302666848091245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887205293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8515587,0.10193873,0.0019870312,0.0070871087,0.007887297,0.00035795412,0.00038370778,0.00010466683,0.028694803],"genre_scores_gemma":[0.9164238,0.018852247,0.00022903694,0.00019938232,0.0003329633,0.00003317709,0.00017810751,0.00005035761,0.06370096],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99784964,0.00058002095,0.0005083713,0.00038846457,0.00007195584,0.0006015388],"domain_scores_gemma":[0.9987678,0.00030805057,0.00018390916,0.0002409369,0.00032264745,0.00017669093],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045451985,0.0003805351,0.00042183566,0.000113136215,0.0004116418,0.00007517245,0.00025806783,0.00046365304,0.0011264447],"category_scores_gemma":[0.00015374478,0.00036872417,0.0001255977,0.00022631591,0.0004984531,0.00032809292,0.000046799836,0.0005294939,0.000039537725],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013775639,0.00091134774,0.09536485,0.0049095526,0.003616889,0.00028035938,0.010226764,0.004342686,0.07826588,0.19126146,0.38250968,0.22693296],"study_design_scores_gemma":[0.0015083634,0.00025856384,0.039114222,0.001512872,0.00015510131,0.00042050864,0.0008554104,0.000099272635,0.0056644264,0.000345426,0.9496189,0.0004469467],"about_ca_topic_score_codex":0.8263459,"about_ca_topic_score_gemma":0.95743597,"teacher_disagreement_score":0.5671092,"about_ca_system_score_codex":0.00064432056,"about_ca_system_score_gemma":0.0029288097,"threshold_uncertainty_score":0.9998765},"labels":[],"label_agreement":null},{"id":"W2887751918","doi":"10.1016/j.jns.2018.08.004","title":"Where there is no brain imaging: Safety and diagnostic value of lumbar puncture in patients with neurological disorders in a rural hospital of Central Africa","year":2018,"lang":"en","type":"article","venue":"Journal of the Neurological Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Lumbar puncture; CSF pleocytosis; Pleocytosis; Neuroimaging; Pediatrics; Cerebrospinal fluid; Intensive care medicine; African trypanosomiasis; Meningitis; Internal medicine; Pathology; Psychiatry; Trypanosomiasis","score_opus":0.0037781976649530575,"score_gpt":0.19824733411325313,"score_spread":0.19446913644830008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887751918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940836,0.00029142044,0.0000024718256,0.004863899,0.0005162,0.00014629342,0.000007421523,0.0000025777751,0.000086110806],"genre_scores_gemma":[0.9996622,0.00011637384,0.000016742666,0.00016809008,0.000025641977,7.6860266e-7,2.0959828e-7,0.0000024597023,0.0000074778327],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988696,0.00033343912,0.00035386792,0.00014323408,0.00005725551,0.00024258577],"domain_scores_gemma":[0.99918115,0.00033555343,0.00031036348,0.00008065842,0.00007089946,0.000021377818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003019692,0.00011103274,0.00027411885,0.000061570994,0.00009272453,0.000011808613,0.00032444843,0.000092213624,0.00013798685],"category_scores_gemma":[0.00059022877,0.000048341197,0.000068911126,0.00027333887,0.000995925,0.00011862312,0.00011424187,0.00029904852,0.0000010051405],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046675513,0.00029352168,0.9962025,0.0000038431012,0.000008081083,9.453314e-7,0.00017873145,0.000024482497,0.0017107038,0.000058277696,0.00016749697,0.00088463334],"study_design_scores_gemma":[0.0010947282,0.0050537223,0.99246114,0.00003230229,0.000010923743,0.000015294041,0.000034037308,0.000023549514,0.00007087728,0.0003651837,0.000780908,0.00005732296],"about_ca_topic_score_codex":0.000041383686,"about_ca_topic_score_gemma":0.00006649369,"teacher_disagreement_score":0.0055786306,"about_ca_system_score_codex":0.000004879752,"about_ca_system_score_gemma":0.000026525908,"threshold_uncertainty_score":0.36695272},"labels":[],"label_agreement":null},{"id":"W2888461788","doi":"10.1186/s12864-018-5000-7","title":"Murine host response to Neisseria gonorrhoeae upper genital tract infection reveals a common transcriptional signature, plus distinct inflammatory responses that vary between reproductive cycle phases","year":2018,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; School of Medicine, Boston University","keywords":"Neisseria gonorrhoeae; Biology; Chemokine; Immunology; Estrous cycle; Innate immune system; Immune system; Microbiology; Endocrinology","score_opus":0.028868774877213545,"score_gpt":0.2777055666748551,"score_spread":0.24883679179764154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888461788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99500823,0.00055921334,0.0003555527,0.0002122528,0.002261548,0.00069109537,0.00059273915,0.00018101076,0.00013838358],"genre_scores_gemma":[0.9964129,0.00002421093,0.00025374425,0.00007868973,0.0012227242,0.000079608835,0.00029831173,0.000054485048,0.001575359],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99765193,0.0007158758,0.0005133603,0.0006490729,0.000022351363,0.00044738015],"domain_scores_gemma":[0.9984712,0.00048198362,0.00020425551,0.0005818895,0.00018138478,0.000079263635],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007957927,0.00036015394,0.00046146833,0.00032251826,0.00056782586,0.000068278234,0.00020681601,0.00037506374,0.0006047947],"category_scores_gemma":[0.0003642717,0.00035001012,0.00019781031,0.00024414225,0.00019957483,0.0002997084,0.00010419268,0.0003591239,0.0004201982],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009778987,0.00018103006,0.13047458,0.000017496022,0.00014524517,0.0000011561418,0.00077863183,0.000010659957,0.85711575,0.000046593024,0.00083174097,0.00061811024],"study_design_scores_gemma":[0.0014038818,0.0008055353,0.83286315,0.000028084462,0.00010828876,0.00015606923,0.00009759237,0.0000017323632,0.08892745,0.00014748209,0.07507667,0.00038404574],"about_ca_topic_score_codex":0.00033403106,"about_ca_topic_score_gemma":0.00041534667,"teacher_disagreement_score":0.7681883,"about_ca_system_score_codex":0.0002588428,"about_ca_system_score_gemma":0.00023698904,"threshold_uncertainty_score":0.9998952},"labels":[],"label_agreement":null},{"id":"W2888780333","doi":"10.1139/cjm-2017-0466","title":"The “hole” story of predatory outer-membrane vesicles","year":2018,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Vesicle; Biology; Bacterial outer membrane; Membrane; Biophysics; Chemistry; Biochemistry","score_opus":0.025582302952007238,"score_gpt":0.2579535106455281,"score_spread":0.23237120769352082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888780333","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027813748,0.9886831,0.0000025908794,0.000100110294,0.007618251,0.00020283347,0.0004856431,0.0000052970713,0.000120774],"genre_scores_gemma":[0.0007757856,0.99681616,0.000013986281,0.00003359423,0.0005840309,0.000005675042,0.00010237765,0.000037760037,0.0016306288],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971255,0.0011607845,0.0010294965,0.00020327712,0.0000073113774,0.00047360768],"domain_scores_gemma":[0.99732685,0.000493915,0.001339362,0.00040973874,0.00033149883,0.00009863015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001026072,0.00032382263,0.0014234692,0.000436912,0.00045284923,0.000022062983,0.0007931048,0.0008643634,0.00056441914],"category_scores_gemma":[0.00023270343,0.0002023004,0.0006079977,0.00014974157,0.0009285757,0.000056192064,0.000045309527,0.0010355642,0.00022449058],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071251045,0.000047432135,0.000026132615,0.0021803423,0.0034054713,0.000037202346,0.00031543366,3.2547393e-7,0.048042912,0.00033510342,0.2538063,0.6917321],"study_design_scores_gemma":[0.00027854246,0.00028963492,0.000008042733,0.0014133166,0.00038999264,0.0029062203,0.00004230154,3.6646315e-9,0.00081061106,0.000009399588,0.99367344,0.00017846895],"about_ca_topic_score_codex":0.0005446221,"about_ca_topic_score_gemma":0.0065564215,"teacher_disagreement_score":0.73986715,"about_ca_system_score_codex":0.00014971253,"about_ca_system_score_gemma":0.0028538762,"threshold_uncertainty_score":0.82495713},"labels":[],"label_agreement":null},{"id":"W2888834461","doi":"10.14745/ccdr.v40i03a01","title":"Pertussis Surveillance in Canada: Trends to 2012","year":2014,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Incidence (geometry); Outbreak; Epidemiology; Medicine; Disease; Pediatrics; Immunization; Whooping cough; Demography; Environmental health; Vaccination; Immunology; Virology; Internal medicine","score_opus":0.009351654886472943,"score_gpt":0.216275290373572,"score_spread":0.20692363548709905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888834461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98750275,0.0014879172,0.00000796646,0.0034034762,0.0012093672,0.00009400697,0.000098111195,0.00002626726,0.006170135],"genre_scores_gemma":[0.9934593,0.000030218262,0.000008946955,0.0005043715,0.000025546575,0.000037315967,0.00028168384,0.000014384572,0.0056382446],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987897,0.00021871642,0.00036277666,0.00022322591,0.000033146927,0.0003724303],"domain_scores_gemma":[0.998536,0.000112813934,0.00009017345,0.0010412898,0.00007293301,0.00014677146],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023465617,0.00015075282,0.00031310206,0.0000746712,0.00017801038,0.000011525073,0.00028768714,0.000046415127,0.0010148286],"category_scores_gemma":[0.00020995832,0.00014225641,0.00004019922,0.00026071342,0.000021749338,0.00005465224,0.00014053177,0.00017748715,0.0000088928955],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011563609,0.0000838142,0.69073206,0.000018449133,0.000087407556,0.00010952198,0.000016276264,0.00019244092,0.0025078838,0.00017904799,0.29464713,0.011310314],"study_design_scores_gemma":[0.00017986899,0.000006565896,0.46277535,0.000011105886,0.000006378506,0.00004141519,0.000021805827,0.0000088813695,0.00006970886,0.0000036666122,0.5367535,0.00012179187],"about_ca_topic_score_codex":0.99954253,"about_ca_topic_score_gemma":0.99997616,"teacher_disagreement_score":0.24210633,"about_ca_system_score_codex":0.000651473,"about_ca_system_score_gemma":0.0037908526,"threshold_uncertainty_score":0.9998984},"labels":[],"label_agreement":null},{"id":"W2888853210","doi":"10.14745/ccdr.v40i03a02","title":"Pertussis Surveillance Trends in British Columbia, Canada, over a 20-year Period: 1993-2013","year":2014,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Fraser Health; Island Health; Vancouver Coastal Health; Interior Health; Provincial Health Services Authority","funders":"Fraser Health Authority; Provincial Health Services Authority","keywords":"Incidence (geometry); Demography; Population; Outbreak; Medicine; Geography; Pediatrics","score_opus":0.0061900648215381686,"score_gpt":0.20381680855072554,"score_spread":0.19762674372918737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888853210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933965,0.0018358065,7.764891e-7,0.0008900181,0.00093718927,0.00010622676,0.00036737625,0.000035948968,0.002430114],"genre_scores_gemma":[0.9797255,0.000096588534,0.0000064234428,0.00026553974,0.000041517662,0.000047202055,0.0011114049,0.000025314517,0.018680545],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983627,0.00030157468,0.00047597775,0.00033357675,0.00005723553,0.00046893387],"domain_scores_gemma":[0.998392,0.000084829415,0.00016239457,0.001114649,0.00010176856,0.00014435388],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026835498,0.00015469657,0.0004349346,0.000046877238,0.00040404478,0.000100119054,0.0003349075,0.0001075983,0.0038262703],"category_scores_gemma":[0.00017157488,0.00022534357,0.000081175385,0.00026443828,0.000081968494,0.00007684017,0.00016678894,0.00029479284,0.0000039698994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020541864,0.000066780085,0.72868764,0.000013300822,0.00006198489,0.00016092544,0.000006508636,0.000010749344,0.00032527334,0.0000062124714,0.26842335,0.0022167559],"study_design_scores_gemma":[0.00039954626,0.000009420449,0.5299773,0.000022629776,0.000011621936,0.00016815182,0.000039756666,0.000013004768,0.0000036309966,0.0000039817533,0.46918237,0.00016853295],"about_ca_topic_score_codex":0.9999114,"about_ca_topic_score_gemma":0.9999976,"teacher_disagreement_score":0.20075902,"about_ca_system_score_codex":0.00042265057,"about_ca_system_score_gemma":0.0023580426,"threshold_uncertainty_score":0.9970844},"labels":[],"label_agreement":null},{"id":"W2889280169","doi":"10.14745/ccdr.v40i03a04","title":"A Survey of Pertussis Surveillance and Immunization Practices in Canada, 2012","year":2014,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Immunization; Environmental health; Medicine; Population; Outbreak; Health care; Standardization; Routine immunization; Economic growth; Political science","score_opus":0.019408991697644002,"score_gpt":0.2457422371972103,"score_spread":0.2263332454995663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889280169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933778,0.0052691856,0.000005142368,0.00031773126,0.00033110805,0.00009420528,0.000092008435,0.0000065528397,0.0005062686],"genre_scores_gemma":[0.99875027,0.0003207965,0.0000058217565,0.000048948008,0.00000475414,0.000009477207,0.00049045816,0.000008876411,0.00036057236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99865544,0.0006252031,0.000371224,0.0001457909,0.000027598773,0.00017475475],"domain_scores_gemma":[0.9982011,0.00046520442,0.00044428822,0.00066315406,0.00017715884,0.000049097463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061843224,0.00010162428,0.0002762855,0.00003801208,0.000118606404,0.000008640933,0.00016055362,0.000042941185,0.00013478413],"category_scores_gemma":[0.0015232586,0.00009624837,0.000014116654,0.00016841077,0.00004474617,0.00010000836,0.0001083242,0.00013474327,4.2462884e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060194005,0.00003455839,0.9943353,0.000025562736,0.00004169069,0.000006344342,0.000007401496,0.000023063194,0.001290664,0.00002700577,0.003322676,0.00082552474],"study_design_scores_gemma":[0.0002710888,0.000008651173,0.9517549,0.000022273804,0.00001176705,0.000034051733,0.00004360018,0.00007024495,0.000113653485,0.000004004272,0.047561515,0.00010422691],"about_ca_topic_score_codex":0.99987644,"about_ca_topic_score_gemma":0.99997944,"teacher_disagreement_score":0.04423884,"about_ca_system_score_codex":0.00016137054,"about_ca_system_score_gemma":0.0036303697,"threshold_uncertainty_score":0.64401203},"labels":[],"label_agreement":null},{"id":"W2889319679","doi":"10.14745/ccdr.v40i03a05","title":"Pertussis: A Global Perspective","year":2014,"lang":"en","type":"editorial","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Perspective (graphical); Political science; Computer science; Artificial intelligence","score_opus":0.008297514128394993,"score_gpt":0.26179665496594473,"score_spread":0.25349914083754976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889319679","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017173061,0.015207016,0.000008308221,0.0007241399,0.96353996,0.00031344456,0.0018724839,0.00015501722,0.016462313],"genre_scores_gemma":[0.18941733,0.001701079,0.000036768844,0.00041471503,0.73034865,0.0004975316,0.024578303,0.0002289448,0.052776672],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977468,0.00040241852,0.0006033559,0.0005988858,0.00010487709,0.0005436354],"domain_scores_gemma":[0.9957973,0.00034721653,0.00046200323,0.0023555264,0.000859678,0.00017829075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030116222,0.0004777876,0.0008227186,0.0000511791,0.00057475397,0.00006721992,0.00077992893,0.0007243363,0.0008326143],"category_scores_gemma":[0.0022664138,0.00044515182,0.0002644266,0.00017697932,0.00015484252,0.00006884187,0.00044352747,0.0009943679,0.00006178262],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013459675,0.000095489675,0.00046881294,0.000049802074,0.0005325655,0.00014562716,0.000008385382,0.000002533086,0.000043612887,0.00031924935,0.9980594,0.0001399061],"study_design_scores_gemma":[0.00054827833,0.000033639666,0.0008672612,0.0001362607,0.00038401232,0.00012323857,0.0001290357,0.0000012162009,0.000009130988,0.00016927737,0.9971104,0.00048820832],"about_ca_topic_score_codex":0.87446404,"about_ca_topic_score_gemma":0.80927,"teacher_disagreement_score":0.23319133,"about_ca_system_score_codex":0.001964054,"about_ca_system_score_gemma":0.0109141935,"threshold_uncertainty_score":0.9998},"labels":[],"label_agreement":null},{"id":"W2889328009","doi":"10.14745/ccdr.v40i03a03","title":"Prolonged Pertussis Outbreak in Ontario Originating in an Under-immunized Religious Community","year":2014,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Toronto Public Health","funders":"","keywords":"Outbreak; Population; Epidemiology; Public health; Medicine; Whooping cough; Immunization; Environmental health; Transmission (telecommunications); Community health; Demography; Pediatrics; Vaccination; Immunology; Virology; Internal medicine; Pathology","score_opus":0.02192578173876361,"score_gpt":0.250734258627982,"score_spread":0.22880847688921838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889328009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555576,0.00046571117,0.0000049316764,0.00036248923,0.0004173582,0.000294103,0.000010304819,0.00006185127,0.0028274665],"genre_scores_gemma":[0.9980883,0.000028720113,0.00004060117,0.00023598342,0.000010148176,0.00008882286,0.0006274197,0.000026178594,0.00085384573],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969919,0.0015814488,0.0006734403,0.00025062618,0.000041775962,0.00046082915],"domain_scores_gemma":[0.99731433,0.00027757016,0.00022117342,0.0019644774,0.000118374446,0.00010404592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010800635,0.00024273177,0.0005075274,0.00014978761,0.0005094867,0.00004159797,0.0005839451,0.0001606265,0.00018956329],"category_scores_gemma":[0.00035218897,0.000239485,0.00006718701,0.00023603553,0.00009817866,0.00017835679,0.0002955219,0.0012818015,0.0000054450006],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035833174,0.00086735876,0.9882346,0.00003368467,0.000075504715,0.00009158921,0.00068650267,0.00024845495,0.0072172787,0.0003435205,0.0007466059,0.0010965773],"study_design_scores_gemma":[0.001983244,0.000086564,0.9389881,0.00012984595,0.000040158186,0.00014772794,0.0007379297,0.00007172974,0.00021876152,0.00038745752,0.056830008,0.00037845917],"about_ca_topic_score_codex":0.9944823,"about_ca_topic_score_gemma":0.9995979,"teacher_disagreement_score":0.056083404,"about_ca_system_score_codex":0.0009243829,"about_ca_system_score_gemma":0.0021836818,"threshold_uncertainty_score":0.97659147},"labels":[],"label_agreement":null},{"id":"W2889494665","doi":"10.1016/j.vaccine.2018.08.066","title":"Low levels of detectable pertussis antibody among a large cohort of pregnant women in Canada","year":2018,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; University of Ottawa; Public Health Agency of Canada","funders":"Canadian Institutes of Health Research; Public Health Agency of Canada","keywords":"Medicine; Pregnancy; Cohort; Obstetrics; Vaccination; Pertussis toxin; Immunization; Cohort study; Pediatrics; Antibody; Immunology; Internal medicine; Biology","score_opus":0.006648637721480012,"score_gpt":0.22417328294858477,"score_spread":0.21752464522710477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889494665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988575,0.00022557277,0.000021345044,0.0000199516,0.00044150103,0.00016223647,0.00009616498,0.000009292812,0.00016642585],"genre_scores_gemma":[0.9993616,0.000040010294,0.000008721375,0.000011909366,0.00002534339,0.000009379674,0.000017132557,0.000009295073,0.0005166188],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990814,0.000062331404,0.00033509854,0.00015675327,0.000014162988,0.000350289],"domain_scores_gemma":[0.9994753,0.00004240049,0.00013270082,0.00022370147,0.00010590072,0.000019977419],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020147125,0.00010495804,0.0003688632,0.00010638204,0.000048194404,0.0000022073211,0.00010922706,0.00008876262,0.0028862555],"category_scores_gemma":[0.00005820974,0.00008352403,0.000030171834,0.00023558695,0.000015156826,0.00006208759,0.00006006412,0.00008307343,0.000009784663],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060298087,0.0000765853,0.5200408,0.000021924005,0.00006446471,4.7046112e-7,0.00013126338,6.035808e-7,0.47894666,0.000010144782,0.00017205517,0.00047472518],"study_design_scores_gemma":[0.0008670117,0.0001575469,0.6527818,0.000069072245,0.000010063173,0.0000046404484,0.00011421452,0.0000067294595,0.34448025,0.0000065411655,0.00143772,0.000064432905],"about_ca_topic_score_codex":0.4981287,"about_ca_topic_score_gemma":0.67927694,"teacher_disagreement_score":0.18114823,"about_ca_system_score_codex":0.000107921,"about_ca_system_score_gemma":0.00027643956,"threshold_uncertainty_score":0.99802524},"labels":[],"label_agreement":null},{"id":"W28898267","doi":"10.1371/journal.pone.0184605","title":"Acute brain pathology and long-term neurological sequelae in experimental pneumococcal meningitis","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; American Heart Association","keywords":"Meningitis; Medicine; Term (time); Pathology; Immunology; Intensive care medicine; Pediatrics","score_opus":0.026348721622137722,"score_gpt":0.24781018369893779,"score_spread":0.22146146207680006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W28898267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99844813,0.0002637282,0.0000102505455,0.00068757887,0.00017918428,0.00015505023,0.000008208786,0.0000644708,0.00018341278],"genre_scores_gemma":[0.9992923,0.000040234052,0.00005025068,0.00016722127,0.00005408566,0.00004674308,0.000048470203,0.000011212189,0.00028949633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904597,0.00023410973,0.00018219718,0.00027465823,0.000010619328,0.0002524586],"domain_scores_gemma":[0.99967206,0.00010876853,0.000042520085,0.0001377109,0.000016680726,0.000022265218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011415603,0.00012820608,0.00027783087,0.000076104196,0.00008528184,0.000015882822,0.000076808086,0.00022883929,0.0005021295],"category_scores_gemma":[0.000054004053,0.00011389612,0.000029092826,0.00005511456,0.00011518396,0.00006672407,0.00011133463,0.00022923811,0.00010265872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009705116,0.0006108567,0.07201902,0.000005751128,0.00007015358,0.00002196997,0.00009577437,5.999113e-8,0.92634696,0.00024076861,0.000030114461,0.00046149318],"study_design_scores_gemma":[0.0020766393,0.0014971953,0.47470626,0.000027385066,0.0000559781,0.00051908864,0.000010225866,0.000009825688,0.52055883,0.00009119489,0.00023254745,0.000214801],"about_ca_topic_score_codex":0.000010682663,"about_ca_topic_score_gemma":0.000024625539,"teacher_disagreement_score":0.40578815,"about_ca_system_score_codex":0.000009861418,"about_ca_system_score_gemma":0.000005747145,"threshold_uncertainty_score":0.5497966},"labels":[],"label_agreement":null},{"id":"W2890526154","doi":"10.14745/ccdr.v44i34a04","title":"Summary of the NACI Update on Immunization in Pregnancy with Tetanus Toxoid, Reduced Diphtheria Toxoid and Reduced Acellular Pertussis (Tdap) Vaccine","year":2018,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Children's Hospital of Eastern Ontario","funders":"Health Canada; Centers for Disease Control and Prevention; Canadian Armed Forces; Public Health Agency; Public Health Agency of Canada","keywords":"Tetanus; Toxoid; Medicine; Diphtheria; Immunization; Pregnancy; Pediatrics; Whooping cough; Incidence (geometry); Pertussis vaccine; Immunology; Vaccination; Antibody","score_opus":0.009011765647047337,"score_gpt":0.2157239971578257,"score_spread":0.20671223151077836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890526154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99287313,0.004153636,0.000002356741,0.00095129176,0.00045957413,0.00040021594,0.000041946652,0.000023415567,0.0010944372],"genre_scores_gemma":[0.9977639,0.0004419737,0.000019988804,0.00008110631,0.000020513044,0.000042331412,0.00020652794,0.000026317448,0.0013973657],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99863297,0.0003152569,0.00046354503,0.00027531604,0.000047582238,0.00026532574],"domain_scores_gemma":[0.9978452,0.00006105328,0.00029858417,0.0015556758,0.00018127683,0.000058239813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018035468,0.00021061221,0.00034888924,0.00006849236,0.00037173933,0.000017663913,0.00034447294,0.00010104353,0.00021038324],"category_scores_gemma":[0.00016289768,0.00014514779,0.00004932944,0.00032394944,0.00015531661,0.0000977726,0.0002314975,0.00023615379,0.0000017721287],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021060868,0.0006758012,0.105089314,0.00013364642,0.0005359195,0.000111207875,0.0002902815,0.000041129715,0.88012946,0.000470829,0.0061536036,0.0042627067],"study_design_scores_gemma":[0.0041260533,0.00049750856,0.67981184,0.0019976478,0.00035660298,0.0005753085,0.0005136426,0.00004467625,0.20737422,0.00013946943,0.103741966,0.0008210909],"about_ca_topic_score_codex":0.071658224,"about_ca_topic_score_gemma":0.13076077,"teacher_disagreement_score":0.67275524,"about_ca_system_score_codex":0.000118295866,"about_ca_system_score_gemma":0.0007756109,"threshold_uncertainty_score":0.9345237},"labels":[],"label_agreement":null},{"id":"W2891426002","doi":"10.9778/cmajo.20180040","title":"Expected challenges of implementing universal pertussis vaccination during pregnancy in Quebec: a cross-sectional survey","year":2018,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université Laval; University of Manitoba; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Cross-sectional study; Diphtheria; Vaccination; Family medicine; Prenatal care; Pregnancy; Environmental health; Population; Immunology","score_opus":0.05093625480659305,"score_gpt":0.3275148364461896,"score_spread":0.2765785816395966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891426002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966793,0.00035464443,0.000008771997,0.00003564006,0.00039655116,0.00024276545,0.000030073938,0.000020459276,0.0022317902],"genre_scores_gemma":[0.997432,0.00008077076,0.000016248898,0.0000016643207,0.000039330545,0.000021851149,0.000078743265,0.0000088542165,0.0023205453],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991116,0.00018863617,0.00026378746,0.00022404362,0.000011821673,0.00020011092],"domain_scores_gemma":[0.9994719,0.00006079545,0.00012908327,0.00015295722,0.000176366,0.000008873898],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022238265,0.00009020616,0.00016812119,0.00013062706,0.00019463175,0.000043996628,0.00020714207,0.000118848264,0.0024838252],"category_scores_gemma":[0.00007862336,0.00008591035,0.000031545635,0.00015560247,0.000036397305,0.0003605908,0.00024743614,0.00007871527,0.000036647267],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017877696,0.00010497314,0.87372833,0.00001868267,0.00006299752,4.5950517e-7,0.0009041841,4.2923844e-7,0.12074696,0.00061507436,0.000041008196,0.003598108],"study_design_scores_gemma":[0.0014920085,0.000076939716,0.9732328,0.000049312497,0.0000034451152,0.0000075726175,0.00027305403,0.0000013145387,0.024123482,0.00002109604,0.0006262308,0.00009272966],"about_ca_topic_score_codex":0.053994864,"about_ca_topic_score_gemma":0.21387246,"teacher_disagreement_score":0.1598776,"about_ca_system_score_codex":0.000059623962,"about_ca_system_score_gemma":0.000048837323,"threshold_uncertainty_score":0.99842805},"labels":[],"label_agreement":null},{"id":"W2891710476","doi":"","title":"Utilisation des vaccins pneumococciques conjugués 10 et 13-valent dans les différents groupes d'âge : avis / auteur, Comité sur l'immunisation du Québec (CIQ) ; rédacteurs, Philippe De Wals","year":2018,"lang":"fr","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Economic rent; Geography; Political science; Economics","score_opus":0.02634482108383572,"score_gpt":0.26808015515264894,"score_spread":0.2417353340688132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891710476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9782011,0.00416574,0.0019160013,0.005782755,0.003665034,0.00065110443,0.00026729176,0.00040405008,0.0049469164],"genre_scores_gemma":[0.9585457,0.0048673674,0.00020177661,0.00034240054,0.0006289248,0.00007619934,0.0006165062,0.000084207764,0.034636915],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9955908,0.0016775791,0.0010899549,0.00068581704,0.00006123953,0.00089462084],"domain_scores_gemma":[0.99751264,0.0005772323,0.000489418,0.0006655626,0.0006284679,0.00012670257],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0009972239,0.0006691976,0.0007766961,0.00025301697,0.0012282628,0.00019155166,0.0004460712,0.00093710795,0.01983041],"category_scores_gemma":[0.00048230772,0.0006244103,0.0003446004,0.00026828924,0.0007917777,0.0008937073,0.00028453858,0.00055374927,0.0012282259],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007493069,0.001956211,0.27312723,0.00022321667,0.0008205637,0.00000382247,0.012581956,0.000011223712,0.60451216,0.006064003,0.019537233,0.08041311],"study_design_scores_gemma":[0.0018194633,0.0010038005,0.5560759,0.00020919435,0.00027320726,0.00016325503,0.00072906906,0.00018961306,0.0628712,0.00039675806,0.3757068,0.0005617546],"about_ca_topic_score_codex":0.26072326,"about_ca_topic_score_gemma":0.34277135,"teacher_disagreement_score":0.54164094,"about_ca_system_score_codex":0.0004880963,"about_ca_system_score_gemma":0.0005349299,"threshold_uncertainty_score":0.99962074},"labels":[],"label_agreement":null},{"id":"W2891733330","doi":"10.14745/ccdr.v44i09a02","title":"Should equivocal Bordetella pertussis PCR results in children be reported to public health?","year":2018,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Centre Hospitalier de l’Université de Montréal; Université de Montréal","funders":"","keywords":"Medicine; Odds ratio; Bordetella pertussis; Confidence interval; Logistic regression; Internal medicine; Retrospective cohort study; Medical record; Whooping cough; Univariate analysis; Pediatrics; Multivariate analysis; Immunology; Vaccination","score_opus":0.06491727161050086,"score_gpt":0.3090221456243047,"score_spread":0.24410487401380382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891733330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.967724,0.0013668988,0.000011679523,0.025807776,0.0009272868,0.0005394271,0.0002682507,0.000106587875,0.0032480455],"genre_scores_gemma":[0.99332166,0.00010191175,0.00004279681,0.0024325824,0.000088075685,0.00006380893,0.0014580544,0.000030388936,0.002460724],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972334,0.00037774502,0.0010631845,0.00050802476,0.00006914242,0.0007484842],"domain_scores_gemma":[0.99684286,0.00008913573,0.00033369462,0.0021040384,0.0002702852,0.00036000463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009337627,0.0002510814,0.00047649405,0.00018073004,0.0005697056,0.000051044804,0.00046591958,0.00015025001,0.00050135073],"category_scores_gemma":[0.0012486567,0.00023770466,0.000089077315,0.00053729257,0.00014873556,0.00011135709,0.0004093038,0.00036842632,0.00002155278],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001082594,0.0010453283,0.41565162,0.000039592105,0.00083452696,0.00037222024,0.0004039578,0.000018627119,0.00696251,0.00032554794,0.55802304,0.015240431],"study_design_scores_gemma":[0.0007704155,0.0001149562,0.3156067,0.000041551182,0.000022889879,0.0005378054,0.00009089642,0.0000059629942,0.00029536703,0.000011481847,0.68223524,0.0002666919],"about_ca_topic_score_codex":0.7088789,"about_ca_topic_score_gemma":0.77285624,"teacher_disagreement_score":0.12421222,"about_ca_system_score_codex":0.00044995893,"about_ca_system_score_gemma":0.0040874784,"threshold_uncertainty_score":0.9693315},"labels":[],"label_agreement":null},{"id":"W2891995329","doi":"","title":"Large pertussis outbreak in rural Canada: Lessons learned from Haida Gwaii.","year":2018,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Northern British Columbia; Coast Mountain College; University of British Columbia","funders":"","keywords":"Outbreak; Medicine; Population; Public health; Pediatrics; Attack rate; Odds ratio; Environmental health; Internal medicine; Virology","score_opus":0.02986046746657044,"score_gpt":0.2395390767406591,"score_spread":0.20967860927408866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891995329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914077,0.00033086876,0.000007743017,0.003441476,0.0022590035,0.00017972993,0.00017530612,0.00004640155,0.0021517805],"genre_scores_gemma":[0.9948307,0.000028840423,0.0000037319865,0.00026548575,0.00019422713,0.00021959732,0.00011616149,0.000011547387,0.0043296674],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9990679,0.00009352995,0.00017701059,0.00018907763,0.000011920755,0.00046055636],"domain_scores_gemma":[0.9996275,0.00005552507,0.00004791479,0.00019954542,0.000040173043,0.000029350274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012662014,0.00011535704,0.00019506554,0.00006135829,0.00015178938,0.000018133336,0.00012350066,0.00015111074,0.0009038712],"category_scores_gemma":[0.00008752173,0.000097801945,0.00003843774,0.00012166816,0.000049031634,0.00007430446,0.00007190703,0.00015491265,0.00012817771],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006430433,0.0006001977,0.32715714,0.000012427568,0.00059735274,0.000011279709,0.0011446647,7.69931e-7,0.07315457,0.0035999832,0.085893884,0.5071847],"study_design_scores_gemma":[0.0008715086,0.000011621582,0.7461273,0.000004112193,0.000013163023,0.0000046314967,0.00019324849,0.0000010593433,0.005103656,0.00011109282,0.24744529,0.00011331136],"about_ca_topic_score_codex":0.63485694,"about_ca_topic_score_gemma":0.89627635,"teacher_disagreement_score":0.5070714,"about_ca_system_score_codex":0.00009550753,"about_ca_system_score_gemma":0.000089354166,"threshold_uncertainty_score":0.9896756},"labels":[],"label_agreement":null},{"id":"W2892366847","doi":"10.14745/ccdr.v44i09a01","title":"Clinical characteristics of pediatric pertussis cases, Quebec 2015–2017","year":2018,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine; Pediatrics; Bordetella pertussis; Epidemiology; Demographics; Retrospective cohort study; Cohort; Disease; Internal medicine; Demography","score_opus":0.03333985390196402,"score_gpt":0.31068985244324865,"score_spread":0.2773499985412846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892366847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99352425,0.0021650929,0.000007160283,0.0003583839,0.0024906232,0.00014236878,0.0002471076,0.0000373259,0.0010277051],"genre_scores_gemma":[0.99358046,0.00055647624,0.000024388459,0.00011592654,0.00033557208,0.000013699964,0.0005036402,0.000017780678,0.004852032],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998305,0.0002638415,0.0008591153,0.00024617388,0.00003685314,0.00028898247],"domain_scores_gemma":[0.9972419,0.00024392283,0.00048634832,0.0014973488,0.000397978,0.00013247045],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039324415,0.000169904,0.00046594007,0.000059632126,0.00033370955,0.000015435171,0.00035913548,0.00014495898,0.0010490188],"category_scores_gemma":[0.0008021858,0.00015255359,0.00014071843,0.00014367506,0.0002606156,0.000075748314,0.00023501905,0.00024655426,0.000034475957],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024217993,0.0003526352,0.77145857,0.00004980132,0.00024883635,0.0002679496,0.000017514138,1.5603598e-7,0.001141094,0.00012802712,0.22326915,0.002824088],"study_design_scores_gemma":[0.00031649118,0.00005936991,0.56089884,0.000017051274,0.00019643299,0.0002449307,0.00002749355,0.0000021914136,0.00011435192,0.0000065313748,0.43795413,0.0001622079],"about_ca_topic_score_codex":0.7424823,"about_ca_topic_score_gemma":0.7316345,"teacher_disagreement_score":0.21468498,"about_ca_system_score_codex":0.000091471724,"about_ca_system_score_gemma":0.002894937,"threshold_uncertainty_score":0.99986416},"labels":[],"label_agreement":null},{"id":"W2892918860","doi":"10.1016/j.vaccine.2018.09.049","title":"Investigation of an increase in large local reactions following vaccine schedule change to include DTaP-HB-IPV-Hib (Infanrix-hexa®) and MMRV (ProQuad®) at 18 months of age","year":2018,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; Ministry of Health and Social Services; Université Laval; Institut National de Santé Publique du Québec","funders":"Pfizer","keywords":"Medicine; Hib vaccine; Pediatrics; Booster dose; Diphtheria; Poliomyelitis; Measles; Adverse effect; Vaccination; Polio vaccine; Immunization; Internal medicine; Virology; Immunology","score_opus":0.025668593770821955,"score_gpt":0.27711014868699985,"score_spread":0.25144155491617787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892918860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977136,0.00044295215,0.00006517125,0.000350745,0.00062732503,0.0005467665,0.00006745536,0.000055737553,0.00013024552],"genre_scores_gemma":[0.9986732,0.000042132986,0.00037362182,0.00014486488,0.0002332738,0.000048890593,0.0002242236,0.000027492897,0.0002322874],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983912,0.00020579775,0.0006235861,0.00037197908,0.000033064774,0.00037438053],"domain_scores_gemma":[0.9990625,0.00008426381,0.00022069609,0.0004088638,0.00013587029,0.00008780915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005845247,0.00023048162,0.0005260881,0.00039155752,0.00021722152,0.00001027766,0.00014296104,0.0002744824,0.00063402095],"category_scores_gemma":[0.00016213632,0.00021408386,0.00007590914,0.00057491875,0.000029760626,0.00035050444,0.00026991437,0.00018383977,0.00004655247],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006466477,0.00018975169,0.1291314,0.000055491942,0.00009912415,0.0000031004818,0.00080081885,0.0000031576208,0.8668769,0.00031942187,0.0007616427,0.0011125391],"study_design_scores_gemma":[0.005109978,0.0013300575,0.6582746,0.00020804243,0.00010460644,0.00004648882,0.0002678618,0.00006409749,0.3188597,0.00019555511,0.015233525,0.00030552005],"about_ca_topic_score_codex":0.0053702365,"about_ca_topic_score_gemma":0.01282362,"teacher_disagreement_score":0.5480172,"about_ca_system_score_codex":0.00006395176,"about_ca_system_score_gemma":0.000037174676,"threshold_uncertainty_score":0.87300867},"labels":[],"label_agreement":null},{"id":"W2893496895","doi":"10.1016/j.pediatrneurol.2018.09.005","title":"Stroke in Pediatric Bacterial Meningitis: Population-Based Epidemiology","year":2018,"lang":"en","type":"article","venue":"Pediatric Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; Ontario Brain Institute; Alberta Children's Hospital; Calgary Laboratory Services; University of Calgary","funders":"CIHR Skin Research Training Centre; Canadian Institutes of Health Research","keywords":"Medicine; Interquartile range; Stroke (engine); Meningitis; Pediatrics; Retrospective cohort study; Pediatric stroke; Population; Epidemiology; Internal medicine; Ischemic stroke; Ischemia","score_opus":0.01874452722614095,"score_gpt":0.2649661748826345,"score_spread":0.24622164765649357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2893496895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907728,0.0004405152,0.00008181395,0.0008259069,0.0071422644,0.00022649871,0.00004660967,0.00014185524,0.00032177006],"genre_scores_gemma":[0.9959312,0.00014571498,0.00007375145,0.0004677173,0.0029666077,0.00005234879,0.0001787536,0.000028248525,0.00015562728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971445,0.0008523904,0.0007154289,0.00056824915,0.00001611803,0.00070328393],"domain_scores_gemma":[0.99827594,0.0009973297,0.0002748289,0.0003275411,0.00008143019,0.000042930064],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00053157186,0.00025453072,0.0005244156,0.00062632875,0.00018697593,0.000009451944,0.00023242006,0.0005712131,0.0022107605],"category_scores_gemma":[0.00066292204,0.000246385,0.000110782836,0.00044117332,0.0000864869,0.00009551471,0.00008684844,0.00043991458,0.00082140166],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035978167,0.0001151561,0.9925302,0.000009736195,0.000010886709,0.0000038085077,0.00001946375,0.000015518499,0.004023703,0.0002607893,0.0022043283,0.00044658192],"study_design_scores_gemma":[0.0019381935,0.0009005019,0.98826134,7.3586205e-7,0.000074297466,0.00005868789,0.0000015195379,0.00002187533,0.00028505415,0.00027862567,0.007945968,0.00023318408],"about_ca_topic_score_codex":0.0007977262,"about_ca_topic_score_gemma":0.0004696144,"teacher_disagreement_score":0.0057416395,"about_ca_system_score_codex":0.000023362281,"about_ca_system_score_gemma":0.000091089554,"threshold_uncertainty_score":0.99999887},"labels":[],"label_agreement":null},{"id":"W2896588193","doi":"10.1017/cjn.2018.349","title":"Cryptococcal Capsules in Cerebrospinal Fluid Visible on Hemocytometer","year":2018,"lang":"en","type":"letter","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Hemocytometer; Cerebrospinal fluid; Content (measure theory); Medicine; Pathology; Mathematics","score_opus":0.03422551004035804,"score_gpt":0.2700680483625401,"score_spread":0.23584253832218208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896588193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.903406,0.0010211413,0.00000356146,0.0881817,0.0051421537,0.00023322464,0.00005005296,0.000022089052,0.0019400787],"genre_scores_gemma":[0.8620231,0.00032148237,0.0002791701,0.13421877,0.0028471875,0.000009641781,0.0000057048974,0.000036437446,0.00025847933],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99312884,0.0019534836,0.0014401327,0.0009188078,0.0002677002,0.0022910635],"domain_scores_gemma":[0.99675333,0.00076036307,0.0011359701,0.00027578822,0.0005373354,0.00053722307],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["sts","research_integrity"],"category_scores_codex":[0.0033864689,0.00069189485,0.0010872695,0.0028274609,0.002773604,0.0008384809,0.002918925,0.0013927,0.0016532285],"category_scores_gemma":[0.0015869562,0.00046329136,0.00045966223,0.0015116042,0.008434758,0.00074354105,0.00011247576,0.005413115,0.00008786808],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004664648,0.00013549998,0.22443491,0.000040529623,0.00011522379,0.013323457,0.00036458933,0.0004163221,0.0015064355,0.00041752562,0.75567174,0.0031073315],"study_design_scores_gemma":[0.0011899892,0.16890062,0.058002673,0.00029664548,0.00009846323,0.060436208,0.00009536927,0.000047163925,0.0010541314,0.00916076,0.6995442,0.0011737588],"about_ca_topic_score_codex":0.002842751,"about_ca_topic_score_gemma":0.042486977,"teacher_disagreement_score":0.16876513,"about_ca_system_score_codex":0.00041923486,"about_ca_system_score_gemma":0.0035209437,"threshold_uncertainty_score":0.9999037},"labels":[],"label_agreement":null},{"id":"W2896910792","doi":"10.1093/jac/dky391","title":"WGS analysis of a penicillin-resistant Neisseria meningitidis strain containing a chromosomal ROB-1 β-lactamase gene","year":2018,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta; Public Health Ontario; University of Toronto; Public Health Agency of Canada","funders":"Public Health England; European Commission; University of Oxford; Meningitis Research Foundation; Government of Canada; Wellcome Trust","keywords":"Neisseria meningitidis; Microbiology; Etest; Penicillin; Agar dilution; Biology; Neisseria; Plasmid; Gene; Virology; Genetics; Bacteria; Antibiotics; Minimum inhibitory concentration","score_opus":0.013296009708787866,"score_gpt":0.26196709954937836,"score_spread":0.2486710898405905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896910792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99774617,0.00023875036,0.000529233,0.0004455066,0.0006641003,0.00010430936,0.00015251887,0.000018344763,0.00010106083],"genre_scores_gemma":[0.9983343,0.00015513677,0.00080693344,0.0002019541,0.0003024148,8.714635e-7,0.000057722595,0.000026942133,0.00011373284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834615,0.00013784514,0.00094587007,0.00020805141,0.00003314735,0.0003289647],"domain_scores_gemma":[0.9981415,0.000076311364,0.0009860301,0.0002393171,0.0005110203,0.00004579221],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004568691,0.0002430467,0.00090523175,0.0005189003,0.00016956725,0.0000412657,0.00026686996,0.0002297378,0.002296213],"category_scores_gemma":[0.00004365202,0.00020198643,0.00057126005,0.00064434775,0.0001851005,0.00017373083,0.000030881278,0.00024198706,0.000013213841],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025820748,0.00027256718,0.0011431307,0.000009997078,0.0036366591,0.000004868296,0.0007130913,0.000021512658,0.98972225,0.000057880497,0.0010073563,0.0008286191],"study_design_scores_gemma":[0.0037068473,0.0015997279,0.010189718,0.00006389804,0.0008996736,0.00022269676,0.00015931072,0.000020158323,0.9734965,0.000013307207,0.0093888575,0.0002392901],"about_ca_topic_score_codex":0.00015311601,"about_ca_topic_score_gemma":0.0001277806,"teacher_disagreement_score":0.016225727,"about_ca_system_score_codex":0.00005581544,"about_ca_system_score_gemma":0.00016878378,"threshold_uncertainty_score":0.9986158},"labels":[],"label_agreement":null},{"id":"W2897087893","doi":"10.1016/j.jalz.2018.07.049","title":"P4‐228: AN AMYLOID‐BETA‐DERIVED PEPTIDE TRANSFORMS RAT GLIAL PROGENITOR CELLS INTO MICROGLIA","year":2018,"lang":"en","type":"article","venue":"Alzheimer s & Dementia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Penticton Regional Hospital","funders":"","keywords":"Progenitor cell; Microglia; Biology; Cell biology; Monocyte; Chemotaxis; Receptor; Immunology; Stem cell; Inflammation; Biochemistry","score_opus":0.0170057125885663,"score_gpt":0.2561217681486298,"score_spread":0.2391160555600635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897087893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9809955,0.01150114,0.00016420809,0.00018056252,0.006043254,0.0005243655,0.000033545763,0.00018911553,0.00036832222],"genre_scores_gemma":[0.99783707,0.000071031354,0.0007965345,0.00014172884,0.000724231,0.00007119756,0.00017262684,0.00004668666,0.00013890852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982928,0.00015421085,0.00045166886,0.0005047657,0.000029563367,0.0005669974],"domain_scores_gemma":[0.99915737,0.000020828229,0.00012630822,0.0004463944,0.00017736007,0.000071746974],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018395264,0.00034116892,0.00033264034,0.00011189962,0.0005751953,0.00008272698,0.00032809144,0.0003154058,0.004107577],"category_scores_gemma":[0.0000041887465,0.00029265028,0.00017279192,0.00015591827,0.00029000448,0.00038431567,0.00008062351,0.00021693023,0.0026050752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020648212,0.00024085114,0.0006653157,0.0000035529474,0.0048713316,0.0000012762872,0.00078551844,1.5214255e-7,0.9704573,0.00008904507,0.005126349,0.017552814],"study_design_scores_gemma":[0.0010575637,0.0005615553,0.0010618833,0.000006984404,0.0029678624,0.00002119709,0.000098085664,0.0000012009407,0.7936852,0.00005780441,0.2001713,0.00030933553],"about_ca_topic_score_codex":0.00083299173,"about_ca_topic_score_gemma":0.00091470475,"teacher_disagreement_score":0.19504496,"about_ca_system_score_codex":0.000008264832,"about_ca_system_score_gemma":0.00006772424,"threshold_uncertainty_score":0.99995255},"labels":[],"label_agreement":null},{"id":"W2899182330","doi":"10.1016/j.vaccine.2018.10.047","title":"Trends in Canadian infant pertussis hospitalizations in the pre- and post-acellular vaccine era, 1981–2016","year":2018,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Canadian Institutes of Health Research; Public Health Agency of Canada","keywords":"Medicine; Whooping cough; Pediatrics; Pertussis vaccine; Bordetella pertussis; Virology; Immunization; Vaccination; Immunology; Biology","score_opus":0.005555284136294864,"score_gpt":0.22736754641856577,"score_spread":0.2218122622822709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899182330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99178714,0.0013816215,0.0000051720494,0.0052059735,0.00047223354,0.00018561895,0.000047394427,0.000023405402,0.00089146],"genre_scores_gemma":[0.997023,0.0001601239,0.0000134094,0.00038206202,0.00011007931,0.000023767061,0.00020353404,0.000014161891,0.0020698747],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894196,0.0001265199,0.00028113884,0.00024663866,0.0000119394645,0.00039178837],"domain_scores_gemma":[0.99949384,0.00004935536,0.00005103277,0.00029572612,0.00006947941,0.000040575535],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024462826,0.0001637053,0.0002194752,0.0005810931,0.00021079033,0.00003269005,0.00015719456,0.00017722034,0.0017926493],"category_scores_gemma":[0.000067129615,0.00011016859,0.00003677179,0.00061336503,0.000016315013,0.00012561795,0.000042426665,0.00018340843,0.00007616589],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024024614,0.00029191506,0.7856222,0.00001400659,0.00011083778,0.0000103464645,0.004541782,0.0000041054886,0.1699533,0.0023742346,0.021084374,0.015752677],"study_design_scores_gemma":[0.0012945025,0.00029144218,0.8473069,0.000022016158,0.000019322491,0.000053836953,0.00013416655,0.000016747197,0.0010378199,0.00003074829,0.14965199,0.0001405],"about_ca_topic_score_codex":0.373369,"about_ca_topic_score_gemma":0.6850637,"teacher_disagreement_score":0.3116947,"about_ca_system_score_codex":0.000048596834,"about_ca_system_score_gemma":0.000079749356,"threshold_uncertainty_score":0.9991198},"labels":[],"label_agreement":null},{"id":"W2900514213","doi":"","title":"Prognosis of Brain Abscesses : Interest of Antibiotics Oral Switch. A Single Center Cohort Study of 109 Adult Patients.","year":2018,"lang":"en","type":"article","venue":"IDWeek 2018","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Medicine; Cohort; Brain abscess; Center (category theory); Cohort study; Antibiotics; Single Center; Intensive care medicine; Surgery; Internal medicine; Abscess; Microbiology; Biology","score_opus":0.024579134632671525,"score_gpt":0.26562828940381644,"score_spread":0.2410491547711449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900514213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998176,0.000021283076,0.000016145814,0.000028011122,0.00096698833,0.00038590757,0.000091864255,0.000017128621,0.00029669932],"genre_scores_gemma":[0.99966955,0.000006288062,0.0000331,0.000014726513,0.00003552258,0.0000015789223,0.000042579282,0.000012431137,0.00018419987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909455,0.00009036307,0.00045530903,0.00018018766,0.000021353433,0.00015821499],"domain_scores_gemma":[0.99879307,0.000051447816,0.0003862368,0.00024049087,0.0005166569,0.000012076668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010158383,0.00012274408,0.00035771853,0.00013298384,0.000047089423,0.00000516875,0.00014417723,0.00011807333,0.00034189926],"category_scores_gemma":[0.0001247868,0.000099125435,0.00006013528,0.00018350336,0.00022399562,0.000069898444,0.0001005996,0.0000656023,0.000031497904],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015561626,0.0043216813,0.6996923,0.000040203748,0.00023984365,8.498799e-8,0.0004951778,4.341881e-8,0.29034472,0.00003496975,0.0034686897,0.0012066434],"study_design_scores_gemma":[0.0021203181,0.0059757326,0.49504313,0.00011192205,0.00009078112,0.0000031697896,0.0004046399,5.296401e-7,0.49330786,0.000010294458,0.002813875,0.000117768424],"about_ca_topic_score_codex":0.00089571264,"about_ca_topic_score_gemma":0.0012869382,"teacher_disagreement_score":0.20464921,"about_ca_system_score_codex":0.000010637365,"about_ca_system_score_gemma":0.000017334902,"threshold_uncertainty_score":0.4042218},"labels":[],"label_agreement":null},{"id":"W2900517308","doi":"10.1097/inf.0000000000002251","title":"Healthcare Resource Utilization and Cost of Invasive Meningococcal Disease in Ontario, Canada","year":2018,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University; GlaxoSmithKline (Canada); GDI Integrated Facility Services (Canada)","funders":"","keywords":"Medicine; Health care; Emergency medicine; Observational study; Intensive care unit; Cohort; Public health; Acute care; Indirect costs; Pediatrics; Internal medicine","score_opus":0.016708075760244915,"score_gpt":0.24060197036125405,"score_spread":0.22389389460100914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900517308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970558,0.0012479111,0.000018007062,0.00048105256,0.00077848096,0.00023671369,0.000035092766,0.0000117958825,0.00013512642],"genre_scores_gemma":[0.9990176,0.00030993434,0.0000013351579,0.0001370778,0.00033056946,0.000012495158,0.000019121517,0.000009547877,0.0001623065],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900836,0.00026875566,0.00031431366,0.00013525566,0.00003342237,0.0002399229],"domain_scores_gemma":[0.99921054,0.00015159891,0.00020887407,0.00014489991,0.00016345941,0.00012061296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002234461,0.0001227869,0.00016389304,0.0001367899,0.00043169985,0.000023134146,0.000091657195,0.000057828456,0.00044323134],"category_scores_gemma":[0.0002277693,0.00008984088,0.000044009837,0.00020368931,0.00009427382,0.00007838214,0.000057899302,0.0003363698,0.0000053166823],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034345812,0.00007856793,0.99537426,0.000021684999,0.000028744591,0.000005473977,0.00032361713,0.00003001083,0.00018756757,0.00010475676,0.00303175,0.0004701022],"study_design_scores_gemma":[0.0010847318,0.00013423525,0.9887727,0.000022565084,0.00013577133,0.00011130911,0.00008893552,0.000007890349,0.000058652266,0.0003824239,0.009083109,0.00011767206],"about_ca_topic_score_codex":0.67697304,"about_ca_topic_score_gemma":0.9329416,"teacher_disagreement_score":0.25596857,"about_ca_system_score_codex":0.00022616952,"about_ca_system_score_gemma":0.0019152485,"threshold_uncertainty_score":0.48530725},"labels":[],"label_agreement":null},{"id":"W2900585653","doi":"10.1016/s1474-4422(18)30387-9","title":"Global, regional, and national burden of meningitis, 1990–2016: a systematic analysis for the Global Burden of Disease Study 2016","year":2018,"lang":"en","type":"article","venue":"The Lancet Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":383,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Dipartimento di Medicina e Chirurgia, Università degli Studi di Milano-Bicocca; Research Institute for Endocrine Sciences, Shahid Beheshti University of Medical Sciences; Health Research Council of New Zealand; Merck Sharp and Dohme; Debre Markos University; Kurdistan University Of Medical Sciences; Pomorski Uniwersytet Medyczny W Szczecinie; Golestan University of Medical Sciences; Medical Research Council; Debre Tabor University; Tartu Ülikool; Technische Universität München; Universitair Medisch Centrum Groningen; Ahvaz Jundishapur University of Medical Sciences; Astellas Pharma; Universiti Kebangsaan Malaysia; York University; Mazandaran University of Medical Sciences; Cochrane South Africa; European Commission; AstraZeneca; Ministério da Educação e Ciência; Islamic Azad University; Ministerio de Educación, Cultura y Deporte; Banaras Hindu University; Universitat de València; Seoul National University; Monash University; Ministério da Educação; Kuwait University; Western Sydney University; Ministry of Education, Science and Technology; Bundesministerium für Bildung und Forschung; Ministerio de Economía y Competitividad; Alborz University of Medical Sciences; Ain Shams University; International Centre for Diarrhoeal Disease Research, Bangladesh; Rijksuniversiteit Groningen; Ministarstvo Prosvete, Nauke i Tehnološkog Razvoja; University of Auckland; Cancer Society of New Zealand; South African Medical Research Council; National Research Foundation; Shahid Beheshti University of Medical Sciences; GlaxoSmithKline; Imperial College London; Meningitis Research Foundation; Alexander von Humboldt-Stiftung; Sanofi Pasteur; Jordan University of Science and Technology; McMaster University; University of Oxford; Maragheh University of Medical Sciences; Hamadan University of Medical Sciences; Novavax; Urmia University of Medical Sciences; Universitetet i Oslo; Johns Hopkins University; UNICEF; Ahmadu Bello University; Wellcome Trust; Urmia University; Ball State University; Alfaisal University; Simmons College; Fundação para a Ciência e a Tecnologia; Pfizer; Università degli Studi di Milano; Università degli Studi di Firenze; Bill and Melinda Gates Foundation; West Virginia University; Tulane University; Maurice Wilkins Centre for Molecular Biodiscovery; Department of Science and Technology, Ministry of Science and Technology, India; Sanofi","keywords":"Medicine; Meningitis; Incidence (geometry); Disease burden; Life expectancy; Case fatality rate; Burden of disease; Cause of death; Pediatrics; Demography; Epidemiology; Disease; Population; Environmental health; Internal medicine","score_opus":0.03163723709474967,"score_gpt":0.2984227735080478,"score_spread":0.2667855364132981,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900585653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915713,0.0021167959,0.00021670335,0.004454025,0.00043801044,0.00071908446,0.00036190904,0.00002018353,0.000101988],"genre_scores_gemma":[0.9992453,0.00010675583,0.0000075212934,0.00014461915,0.00029659373,0.00008228701,0.000020673204,0.000004418781,0.00009186603],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886054,0.0003970603,0.00032508094,0.00019917995,0.000032534044,0.0001856297],"domain_scores_gemma":[0.9985896,0.0005561096,0.00026945554,0.00035078367,0.00021922468,0.000014835957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046308758,0.000115839146,0.0005015334,0.00004563901,0.00018752611,0.000009908787,0.00029626852,0.00007410306,0.00006802329],"category_scores_gemma":[0.00020008638,0.00006278462,0.00011007154,0.00027310586,0.00035999724,0.000031246753,0.00011043692,0.000057406538,0.000010175352],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.031146117,0.0021295336,0.6129755,0.004087115,0.048975904,0.000008967048,0.0060819467,0.0030716264,0.032816347,0.09584356,0.16170627,0.0011571475],"study_design_scores_gemma":[0.011566716,0.006596291,0.9098522,0.00036141917,0.011902638,0.00030018378,0.0012080654,0.0017040632,0.00022003139,0.015238421,0.04041423,0.0006357207],"about_ca_topic_score_codex":0.0010822141,"about_ca_topic_score_gemma":0.00023965274,"teacher_disagreement_score":0.29687676,"about_ca_system_score_codex":0.00001012356,"about_ca_system_score_gemma":0.00005474707,"threshold_uncertainty_score":0.25602826},"labels":[],"label_agreement":null},{"id":"W2901229968","doi":"10.3389/fneur.2018.00929","title":"Risk Factors in Predicting Prognosis of Neonatal Bacterial Meningitis—A Systematic Review","year":2018,"lang":"en","type":"article","venue":"Frontiers in Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Medicine; Meningitis; Pediatrics; Glasgow Coma Scale; Cohort study; Intensive care medicine; Internal medicine; Surgery","score_opus":0.007745763576364166,"score_gpt":0.22066715419969948,"score_spread":0.21292139062333532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901229968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989694,0.0041883145,0.00010889212,0.00007744036,0.0050552473,0.0007363496,0.000044013595,0.00003327975,0.00006246394],"genre_scores_gemma":[0.9986567,0.0010012111,0.00007755942,0.000043970682,0.000058132435,0.00007822225,0.00004087238,0.000014750083,0.000028582106],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980134,0.0007026168,0.0006910412,0.00027690225,0.000015179288,0.00030085686],"domain_scores_gemma":[0.9992519,0.0001233311,0.00034504646,0.00021654618,0.000049669263,0.0000134899665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000371913,0.00016081113,0.00077213714,0.00024927108,0.000059407266,0.0000050187405,0.00018619878,0.00024686454,0.00022056287],"category_scores_gemma":[0.00054592144,0.00013691251,0.000077819066,0.00026255404,0.00016589095,0.00008835225,0.00007630425,0.0002978428,0.000013935953],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002747282,0.00011487304,0.9748054,0.008036507,0.00014073135,0.000004308841,0.00050116965,0.0000011459161,0.013302013,0.000026600443,0.0024910693,0.00030141865],"study_design_scores_gemma":[0.012935768,0.009800692,0.82651454,0.03974003,0.0017769544,0.0007196775,0.00090525526,0.0002484725,0.093801685,0.00059673015,0.011131698,0.0018285228],"about_ca_topic_score_codex":0.00035922206,"about_ca_topic_score_gemma":0.00017996646,"teacher_disagreement_score":0.14829092,"about_ca_system_score_codex":0.000013705574,"about_ca_system_score_gemma":0.000024082492,"threshold_uncertainty_score":0.558313},"labels":[],"label_agreement":null},{"id":"W2901491783","doi":"10.1016/j.vaccine.2018.10.095","title":"Short-term safety of 4CMenB vaccine during a mass meningococcal B vaccination campaign in Quebec, Canada","year":2018,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia; Ministry of Health and Social Services; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Université Laval; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec","funders":"","keywords":"Mass vaccination; Vaccine safety; Vaccination; Meningococcal vaccine; Medicine; Term (time); Meningococcal disease; Meningococcal Infections; Meningococcal meningitis; Virology; Pediatrics; Immunology; Immunization; Neisseria meningitidis; Biology; Antibody","score_opus":0.007406318593488736,"score_gpt":0.22869770186310387,"score_spread":0.22129138326961514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901491783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974419,0.0002636141,0.00010524421,0.00035334556,0.0010798189,0.00031423915,0.0000318972,0.000049983933,0.00035997079],"genre_scores_gemma":[0.997589,0.000052413663,0.000035759258,0.000023001598,0.00019061762,0.000016604004,0.000107643355,0.000023572597,0.0019614066],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99846536,0.00012359527,0.0006467544,0.0003310082,0.000029190285,0.0004040695],"domain_scores_gemma":[0.9992299,0.0000694388,0.00014816308,0.00033776692,0.00018035229,0.00003436878],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019433492,0.00023502199,0.00044800047,0.00023481427,0.00016113803,0.000012265759,0.0001909209,0.00019879945,0.0026458928],"category_scores_gemma":[0.00005599429,0.00021088314,0.00005909902,0.00038888885,0.0000072959574,0.000167629,0.00008359891,0.0002118657,0.00003037527],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079050096,0.0001052704,0.19028312,0.00004095522,0.000106021915,0.0000043846107,0.00021807179,0.000009913634,0.8037727,0.000121581405,0.0019518292,0.002595688],"study_design_scores_gemma":[0.0025689376,0.00011917853,0.7855472,0.0000498324,0.000029029146,0.000028766808,0.00011014596,0.000008630781,0.20465846,0.000015303265,0.006661343,0.00020317538],"about_ca_topic_score_codex":0.42804515,"about_ca_topic_score_gemma":0.9313709,"teacher_disagreement_score":0.5991142,"about_ca_system_score_codex":0.0002616952,"about_ca_system_score_gemma":0.00015895777,"threshold_uncertainty_score":0.9982658},"labels":[],"label_agreement":null},{"id":"W2901732241","doi":"10.1097/inf.0000000000002247","title":"Epidemiology of Meningitis in Canadian Neonatal Intensive Care Units","year":2018,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University of British Columbia; University of Alberta; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Meningitis; Bronchopulmonary dysplasia; Pediatrics; Neonatal meningitis; Odds ratio; Epidemiology; Retinopathy of prematurity; Bacteremia; Intensive care; Neonatal intensive care unit; Confidence interval; Birth weight; Gestational age; Retrospective cohort study; Mechanical ventilation; Low birth weight; Internal medicine; Pregnancy; Intensive care medicine; Antibiotics; Biology","score_opus":0.016509383475560746,"score_gpt":0.26232229843612875,"score_spread":0.245812914960568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901732241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909538,0.0055551245,0.000023859742,0.00029689074,0.002622702,0.0001312257,0.000079899815,0.000017468803,0.00031901448],"genre_scores_gemma":[0.99852586,0.0003467598,0.0000027946357,0.00018313255,0.00082745415,0.0000074622467,0.000020472718,0.000011898573,0.00007417771],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998524,0.00045493184,0.00040131048,0.00013414721,0.000014407541,0.00047116532],"domain_scores_gemma":[0.99810314,0.0002886818,0.00022265779,0.00017503426,0.0010818422,0.0001286389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042532556,0.00013693713,0.0002568441,0.00042807922,0.0004340811,0.000005864382,0.00016561977,0.00013395172,0.0007012883],"category_scores_gemma":[0.0018388116,0.00009702898,0.000089402434,0.00047280078,0.00017961532,0.00008112337,0.000048522717,0.00042696003,0.00011894081],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086828695,0.000008691947,0.99502647,0.000009065466,0.000052647756,0.000008391766,0.0017822945,0.000018582332,0.0001087408,0.00029900327,0.0017853816,0.00081388035],"study_design_scores_gemma":[0.0015573392,0.00047863516,0.98357534,0.000025939991,0.00026011802,0.0016781861,0.0024437401,0.000008202128,0.00016562977,0.0013785771,0.008186928,0.00024135863],"about_ca_topic_score_codex":0.06788824,"about_ca_topic_score_gemma":0.0818186,"teacher_disagreement_score":0.01393037,"about_ca_system_score_codex":0.00014587776,"about_ca_system_score_gemma":0.0007815013,"threshold_uncertainty_score":0.9383188},"labels":[],"label_agreement":null},{"id":"W2901736077","doi":"10.1097/pec.0000000000001639","title":"Test Characteristics of Cerebrospinal Fluid Gram Stain to Identify Bacterial Meningitis in Infants Younger Than 60 Days","year":2018,"lang":"en","type":"article","venue":"Pediatric Emergency Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stollery Children's Hospital; Women and Children’s Health Research Institute; University of Calgary","funders":"","keywords":"Medicine; Gram staining; Overdiagnosis; Cerebrospinal fluid; Confidence interval; Meningitis; Gram; Microbiological culture; Stain; Bacterial meningitis; Internal medicine; Gastroenterology; Pathology; Pediatrics; Antibiotics; Staining; Microbiology; Bacteria","score_opus":0.01133903553061325,"score_gpt":0.28288876078029607,"score_spread":0.2715497252496828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901736077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989017,0.00055556215,0.000019748832,0.000038156602,0.008975863,0.00030575338,0.00066255766,0.000051249466,0.00037410576],"genre_scores_gemma":[0.9972092,0.00046810188,0.000039540355,0.000008585606,0.0015181963,0.000042801028,0.00038275582,0.000027943935,0.00030285714],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983396,0.00009719399,0.00071051304,0.0003665021,0.000039936695,0.00044623343],"domain_scores_gemma":[0.99896157,0.000040779738,0.00020412207,0.00033251583,0.00041194202,0.000049087663],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016031985,0.00023978786,0.00038598347,0.00032893853,0.00015867461,0.000016290818,0.00024744382,0.000256588,0.0043541174],"category_scores_gemma":[0.0003079348,0.0002380135,0.00010738547,0.00059467764,0.000045890054,0.00017076227,0.0001621973,0.00017035138,0.00035336756],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014766499,0.00011760199,0.59028435,0.0000658101,0.000028380819,0.000002096612,0.0012892743,1.5441577e-7,0.4025812,0.000027982149,0.004335554,0.001119916],"study_design_scores_gemma":[0.00068445463,0.00074309803,0.9758256,0.000015457372,0.00008510995,0.000010132441,0.00025816757,3.8627783e-7,0.0131383,0.000019185542,0.008923421,0.00029670342],"about_ca_topic_score_codex":0.0011207868,"about_ca_topic_score_gemma":0.0005493465,"teacher_disagreement_score":0.3894429,"about_ca_system_score_codex":0.000053704236,"about_ca_system_score_gemma":0.000083434825,"threshold_uncertainty_score":0.99655604},"labels":[],"label_agreement":null},{"id":"W2902197269","doi":"10.1093/ofid/ofy210.2107","title":"2454. Pertussis Vaccine Effectiveness and Waning Immunity in Alberta, Canada: 2004–2015","year":2018,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Provincial Laboratory of Public Health; Government of Alberta; University of Manitoba; Ministry of Health; University of Alberta; Institute for Clinical Evaluative Sciences; University of Calgary","funders":"","keywords":"Medicine; Vaccination; Bordetella pertussis; Odds ratio; Confidence interval; Pertussis vaccine; Incidence (geometry); Pediatrics; Logistic regression; Vaccination schedule; Immunization; Demography; Immunology; Internal medicine; Immune system","score_opus":0.0068110386562510354,"score_gpt":0.25031320385184336,"score_spread":0.2435021651955923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902197269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933717,0.0008881667,0.000012117651,0.00046127124,0.0011503083,0.0005075679,0.000056780555,0.000040834137,0.0035112044],"genre_scores_gemma":[0.9989155,0.0000453918,0.000002424888,0.00020911517,0.00004867026,0.00010374232,0.00008363056,0.000024128654,0.00056740525],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862826,0.00032638176,0.00025484426,0.00034355596,0.000018317227,0.00042863353],"domain_scores_gemma":[0.999117,0.00030703706,0.00009432514,0.0003044801,0.000114479735,0.000062637104],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017437001,0.00023833629,0.00040315703,0.00011585141,0.0006241581,0.000102671,0.00022656925,0.00013384309,0.00093977316],"category_scores_gemma":[0.00023526847,0.00020721802,0.00004742218,0.000255692,0.00008545143,0.00037530583,0.00038218053,0.00018177189,0.000065321314],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003988039,0.00032752115,0.9734688,0.00002989088,0.00018672274,0.000003083012,0.00009279526,0.0000040275845,0.007877167,0.00085968804,0.010973399,0.0057781045],"study_design_scores_gemma":[0.0030432374,0.0004312832,0.9449991,0.00009651861,0.0000749694,0.000095317766,0.00016462934,0.0000055700802,0.0035991555,0.00046702148,0.046676964,0.00034625566],"about_ca_topic_score_codex":0.8729239,"about_ca_topic_score_gemma":0.92786723,"teacher_disagreement_score":0.054943323,"about_ca_system_score_codex":0.00017733977,"about_ca_system_score_gemma":0.00032959782,"threshold_uncertainty_score":0.9999735},"labels":[],"label_agreement":null},{"id":"W2902408864","doi":"10.1093/ofid/ofy209.022","title":"152. Protective Antibody Levels 7.5 Years After Primary Vaccination in Adolescence With a Recombinant, 4-Component, Meningococcal Serogroup B Vaccine (4CMenB) and Response to a Booster Dose in Adolescents and Young Adults: Phase IIIb Clinical Findings","year":2018,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; University of Toronto; SickKids Foundation; Canadian Rheumatology Association","funders":"GlaxoSmithKline; Pfizer","keywords":"Medicine; Vaccination; Booster dose; Immunogenicity; Meningococcal vaccine; Pediatrics; Antibody; Booster (rocketry); Immunology; Immunization","score_opus":0.01178211040696629,"score_gpt":0.31352224807075996,"score_spread":0.30174013766379365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902408864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965251,0.00019651173,0.00006010994,0.00018883019,0.0003923964,0.0024755679,0.000073028874,0.00004966001,0.000038768798],"genre_scores_gemma":[0.99908996,0.000038273924,0.000026373702,0.00026789328,0.000032373904,0.00041734613,0.000040333958,0.000033125616,0.000054348246],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997672,0.0005894394,0.00052406674,0.0007091629,0.00003605169,0.00046928288],"domain_scores_gemma":[0.99929625,0.00008212142,0.00014745296,0.00025985998,0.00011084609,0.00010347522],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006065387,0.00030105488,0.0005095733,0.0003915453,0.00019496551,0.00015273236,0.0001715174,0.00020573825,0.00009307105],"category_scores_gemma":[0.00017738149,0.0002661046,0.000047156274,0.00040997914,0.0000889032,0.00066440797,0.00045711664,0.00031143372,0.000032603468],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.038732823,0.0017878427,0.92688626,0.000052064104,0.00005480864,0.00002247332,0.0007240913,1.7365248e-7,0.018210197,0.000008152962,0.000092862094,0.01342825],"study_design_scores_gemma":[0.020105965,0.0038630695,0.9734168,0.0010635242,0.00004336131,0.00012926912,0.00019020199,0.000007177097,0.00042800294,0.00005087803,0.00034829756,0.00035345164],"about_ca_topic_score_codex":0.0006890718,"about_ca_topic_score_gemma":0.0022997535,"teacher_disagreement_score":0.04653054,"about_ca_system_score_codex":0.00013753262,"about_ca_system_score_gemma":0.00008592688,"threshold_uncertainty_score":0.99997914},"labels":[],"label_agreement":null},{"id":"W2903285205","doi":"10.1128/msphere.00427-18","title":"A Longitudinal Epidemiology Study of Meningococcal Carriage in Students 13 to 25 Years Old in Quebec","year":2018,"lang":"en","type":"article","venue":"mSphere","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Pfizer","keywords":"Carriage; Epidemiology; Meningococcal Infections; Meningococcal meningitis; Meningococcal disease; Longitudinal study; Medicine; Demography; Pediatrics; Neisseria meningitidis; Sociology; Biology; Internal medicine","score_opus":0.03221419556811469,"score_gpt":0.33245594313788424,"score_spread":0.30024174756976957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903285205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985485,0.00009256547,0.000006733378,0.000056409448,0.0006724944,0.00037780937,0.0000057035095,0.000016515636,0.0002232447],"genre_scores_gemma":[0.99810845,0.0000028961522,0.0000220209,0.000042255346,0.000059722854,0.000049337912,0.000005450275,0.0000090992935,0.001700782],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986523,0.00036886716,0.00041558125,0.00027236657,0.000012736851,0.00027819388],"domain_scores_gemma":[0.9995236,0.00011391216,0.00007717353,0.00022835558,0.000038196733,0.000018777875],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00044256682,0.000115155824,0.00040454775,0.00011261065,0.00003502181,0.000005451664,0.00020015103,0.00016586133,0.0009494905],"category_scores_gemma":[0.00014045984,0.000106030064,0.00003434966,0.00025759148,0.000058051155,0.000048322283,0.00015715836,0.00017039754,0.00020726067],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017618596,0.00063073065,0.96970457,0.0000040975838,0.000054104632,0.000004291579,0.0024223025,0.000008873423,0.024448734,0.000075744,0.00089008233,0.0015802996],"study_design_scores_gemma":[0.0019918215,0.00093904836,0.99170333,0.000030564366,0.00001078541,0.0000052235896,0.0012273915,6.446635e-7,0.00056255487,0.000024086057,0.0034064322,0.00009813591],"about_ca_topic_score_codex":0.15243591,"about_ca_topic_score_gemma":0.5152389,"teacher_disagreement_score":0.36280295,"about_ca_system_score_codex":0.000054692115,"about_ca_system_score_gemma":0.000022495251,"threshold_uncertainty_score":0.99996376},"labels":[],"label_agreement":null},{"id":"W2903463636","doi":"10.1093/ofid/ofy209.023","title":"153. The Effect of Timing of Tetanus–Diphtheria and Pertussis Vaccine Administration in Pregnancy on The Avidity of Pertussis Antibodies","year":2018,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Avidity; Tetanus; Vaccination; Pregnancy; Diphtheria; Antibody; Gestational age; Gestation; Immunology; Obstetrics; Immunoglobulin G","score_opus":0.01561614574959969,"score_gpt":0.28470684117757905,"score_spread":0.26909069542797937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903463636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957387,0.0007482885,0.0000035230835,0.00036487152,0.00025806244,0.0006347899,0.000087542794,0.000010443642,0.0021537878],"genre_scores_gemma":[0.9996414,0.00015070017,0.0000018751762,0.000022100627,0.000017811897,0.000059100035,0.000023643433,0.000009719296,0.00007362917],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989821,0.000341239,0.00032180763,0.00017603341,0.000022149718,0.00015667822],"domain_scores_gemma":[0.99879986,0.00054297753,0.00026110743,0.00030348645,0.00007982689,0.000012756368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021764594,0.00015240046,0.0003612886,0.00007202412,0.00024567556,0.000024770487,0.0001966907,0.00008553802,0.0006431766],"category_scores_gemma":[0.0003198508,0.00007835927,0.00008756778,0.00016981867,0.00022908844,0.00013284756,0.00014910566,0.00008403854,0.0000053162803],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009386525,0.0003974579,0.89025176,0.00010541414,0.00024811682,3.5495273e-7,0.00031439072,0.0000013013789,0.09679687,0.0011550355,0.0010425764,0.008748101],"study_design_scores_gemma":[0.0017279201,0.004492626,0.69100964,0.0005185849,0.00021253891,0.000021423413,0.00031602508,0.000009691206,0.30051735,0.00031444855,0.0007089687,0.00015079214],"about_ca_topic_score_codex":0.00077571487,"about_ca_topic_score_gemma":0.00059981865,"teacher_disagreement_score":0.20372048,"about_ca_system_score_codex":0.000012545886,"about_ca_system_score_gemma":0.0000468925,"threshold_uncertainty_score":0.7042333},"labels":[],"label_agreement":null},{"id":"W2904114121","doi":"10.1093/jpids/piy128","title":"Burden of Children Hospitalized With Pertussis in Canada in the Acellular Pertussis Vaccine Era, 1999–2015","year":2018,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre; University of Alberta; Nova Scotia Health Authority; Alberta Children's Hospital; University of Calgary; Dalhousie University; BC Children's Hospital; Alberta Health Services; Stollery Children's Hospital; University of British Columbia","funders":"Public Health Agency of Canada","keywords":"Medicine; Pediatrics; Bordetella pertussis; Population; Epidemiology; Pertussis vaccine; Vaccination; Confidence interval; Immunization; Internal medicine; Immunology; Immune system; Environmental health","score_opus":0.0030552517197561624,"score_gpt":0.19587521999055713,"score_spread":0.19281996827080097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904114121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99535894,0.0026749964,0.0000086508235,0.00085432664,0.0007833131,0.00023073221,0.00004302636,0.000006500744,0.000039484108],"genre_scores_gemma":[0.9983609,0.0008496041,0.0000086742175,0.00014233426,0.0005637984,0.00000774943,0.0000059002655,0.000013617694,0.00004745562],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987067,0.00028954566,0.00050704676,0.00013946358,0.000082385246,0.000274852],"domain_scores_gemma":[0.99882406,0.00014535362,0.00053247705,0.00027130247,0.00019532607,0.00003147331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031045917,0.00018160924,0.00038271624,0.00008939936,0.00020792932,0.000019328952,0.00037192725,0.00010887257,0.0001878955],"category_scores_gemma":[0.00010372774,0.00009123585,0.00030821373,0.0007331744,0.000076175056,0.00011576007,0.00007261626,0.0004090353,0.0000027626859],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011216293,0.00021619722,0.9839906,0.000015361062,0.00020773355,0.0000014895579,0.0009823584,0.00009242745,0.0007269136,0.00000479492,0.013516221,0.00013374322],"study_design_scores_gemma":[0.003577482,0.0004487111,0.99288553,0.000032365137,0.0005092674,0.0005538434,0.00072889106,0.000013474779,0.00013283093,0.000044825065,0.000894439,0.00017832783],"about_ca_topic_score_codex":0.28128633,"about_ca_topic_score_gemma":0.07523899,"teacher_disagreement_score":0.20604733,"about_ca_system_score_codex":0.00027289698,"about_ca_system_score_gemma":0.0010003127,"threshold_uncertainty_score":0.9416355},"labels":[],"label_agreement":null},{"id":"W2905026460","doi":"10.1093/jpids/piy126","title":"Application of the Bacterial Meningitis Score for Infants Aged 0 to 60 Days","year":2018,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Medicine; Confidence interval; Pleocytosis; Bacterial meningitis; Meningitis; Cerebrospinal fluid; Internal medicine; Pediatrics","score_opus":0.008138543661476446,"score_gpt":0.24346324127382354,"score_spread":0.2353246976123471,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905026460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99348986,0.00017490043,0.00087481155,0.00018219746,0.004677509,0.00041420438,0.00014066775,0.000015845662,0.000030026724],"genre_scores_gemma":[0.9977129,0.00006347652,0.000035245066,0.00009681057,0.0019632156,0.000022867367,0.000005491613,0.000012986672,0.00008697994],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99916816,0.00010869473,0.00039331295,0.000111010784,0.000038326623,0.00018050664],"domain_scores_gemma":[0.99858814,0.00013374655,0.00061715336,0.00024993482,0.00037989722,0.00003112356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022719888,0.000117917305,0.00022312874,0.000042457683,0.0004925459,0.000022337399,0.00028921105,0.0001273737,0.00009082738],"category_scores_gemma":[0.00024255527,0.00006837206,0.0005820095,0.00036052315,0.00009923506,0.000092622206,0.00012344259,0.00015526511,0.000008389246],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002639159,0.00028847952,0.70421815,0.000051513147,0.0003233578,5.164638e-8,0.00070299493,0.000035506695,0.23937696,0.000075863514,0.05336121,0.0013019879],"study_design_scores_gemma":[0.004591878,0.0011498658,0.9518143,0.00005022071,0.0016636603,0.00038345164,0.00014897563,0.000012358586,0.017307289,0.0009938484,0.021557342,0.00032684108],"about_ca_topic_score_codex":0.000050359387,"about_ca_topic_score_gemma":0.00002101616,"teacher_disagreement_score":0.24759611,"about_ca_system_score_codex":0.00006598528,"about_ca_system_score_gemma":0.00014987649,"threshold_uncertainty_score":0.37883148},"labels":[],"label_agreement":null},{"id":"W2905534193","doi":"10.1080/14760584.2019.1557520","title":"The Global Meningococcal Initiative meeting on prevention of meningococcal disease worldwide: Epidemiology, surveillance, hypervirulent strains, antibiotic resistance and high-risk populations","year":2018,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Sanofi Pasteur; Centers for Disease Control and Prevention; World Health Organization; University of Pittsburgh; Sanofi","keywords":"Medicine; Epidemiology; Outbreak; Meningococcal vaccine; Meningococcal disease; Antibiotic resistance; Vaccination; Neisseria meningitidis; Disease burden; Environmental health; Immunology; Intensive care medicine; Virology; Antibiotics; Immunization; Population; Biology; Microbiology; Internal medicine","score_opus":0.06280203768521392,"score_gpt":0.3810279206254549,"score_spread":0.31822588294024096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905534193","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010653513,0.9952337,0.000027500788,0.00034284918,0.0012250644,0.0013817879,0.0005318083,0.000038467857,0.00015344277],"genre_scores_gemma":[0.0014887691,0.9970186,0.00029772462,0.000052777636,0.00028047204,0.00012336217,0.0005806614,0.000032078427,0.00012556487],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9937883,0.0031394372,0.0020302644,0.00060876965,0.000044466797,0.00038876245],"domain_scores_gemma":[0.99519753,0.0013338935,0.0024376162,0.0006913332,0.00027727574,0.00006235928],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019455259,0.0005570695,0.0026365514,0.00010677675,0.00044220837,0.000013776265,0.00036189816,0.00030171097,0.0000835685],"category_scores_gemma":[0.0031313626,0.00033853826,0.0006224022,0.00044083016,0.0002457355,0.00008271332,0.00018973851,0.0003204836,0.000018348423],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029036403,0.0004788011,0.006849899,0.049532484,0.0018401188,0.0000015326332,0.00006559064,7.4984905e-7,0.000037429072,0.010837743,0.024850631,0.90521467],"study_design_scores_gemma":[0.0004830981,0.00026150336,0.011017484,0.09237717,0.0007341802,0.00001538865,0.000019070729,6.3770284e-7,0.000010265381,0.00048146356,0.8942151,0.00038464053],"about_ca_topic_score_codex":0.00015226194,"about_ca_topic_score_gemma":0.0002981504,"teacher_disagreement_score":0.90483004,"about_ca_system_score_codex":0.00008158459,"about_ca_system_score_gemma":0.0001578514,"threshold_uncertainty_score":0.99990666},"labels":[],"label_agreement":null},{"id":"W2905904940","doi":"10.7189/jogh.09.010409","title":"Meningococcal serogroups and surveillance: a systematic review and survey","year":2018,"lang":"en","type":"review","venue":"Journal of Global Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research","funders":"Sanofi Pasteur; China Scholarship Council; World Health Organization; Sanofi","keywords":"Meningococcal disease; Medicine; Neisseria meningitidis; Meningococcal vaccine; Epidemiology; Meningococcal meningitis; Public health; Environmental health; Meningitis; Disease burden; Disease surveillance; Geography; Pediatrics; Population; Immunology; Immunization; Biology; Internal medicine","score_opus":0.038217163530885334,"score_gpt":0.3819217847642029,"score_spread":0.3437046212333176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905904940","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018038166,0.9977688,0.000007719047,0.000090106965,0.0009469911,0.00076182233,0.00021915654,0.000009520073,0.000015493673],"genre_scores_gemma":[0.00012149631,0.9995288,0.00001705209,0.00012248987,0.00010488274,0.000008214773,0.00003846135,0.000012350024,0.000046203022],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99586785,0.0021095425,0.0015374196,0.00019140393,0.000024208131,0.00026956978],"domain_scores_gemma":[0.99722725,0.00024260914,0.0020231954,0.00018980251,0.00023018154,0.00008693754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033655013,0.00028893456,0.003914627,0.00005752822,0.00014534537,0.000033056494,0.00015227235,0.00028108078,0.000035302073],"category_scores_gemma":[0.00032760893,0.00017963616,0.00020904384,0.00023294511,0.00008215522,0.00006372948,0.00007839838,0.00034607097,0.000026251522],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018552151,0.000049867645,0.00044157574,0.9606522,0.00073595875,0.0000017441542,0.0000090430085,1.2019388e-9,1.6508467e-7,0.000054921984,0.012360792,0.025675185],"study_design_scores_gemma":[0.0004691687,0.0009991134,0.001910847,0.4220047,0.0012655269,0.011912178,0.00000701281,2.3821478e-8,2.223057e-8,0.000015132713,0.5611634,0.00025285833],"about_ca_topic_score_codex":0.00019092788,"about_ca_topic_score_gemma":0.00025450176,"teacher_disagreement_score":0.5488026,"about_ca_system_score_codex":0.00022718273,"about_ca_system_score_gemma":0.00055503746,"threshold_uncertainty_score":0.732535},"labels":[],"label_agreement":null},{"id":"W2909064840","doi":"10.1016/j.jprot.2018.12.029","title":"Proteomic characterization of outer membrane vesicles from gut mucosa-derived fusobacterium nucleatum","year":2019,"lang":"en","type":"article","venue":"Journal of Proteomics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical School, University of Michigan; National Institutes of Health; University of Guelph; University of Michigan","keywords":"Fusobacterium nucleatum; Bacterial outer membrane; Microbiology; Fusobacterium; Vesicle; Biology; Chemistry; Bacteria; Membrane; Escherichia coli; Biochemistry; Bacteroides; Porphyromonas gingivalis","score_opus":0.008496243743278733,"score_gpt":0.2106432622244507,"score_spread":0.20214701848117198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909064840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959739,0.000027681397,0.00034846424,0.00036789762,0.002638241,0.0004878133,0.00008025959,0.000017398172,0.000058340927],"genre_scores_gemma":[0.9979964,0.00008267066,0.001132736,0.00004361842,0.00031501256,0.000006941033,0.00006980716,0.000026585807,0.00032621762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878097,0.00013562194,0.00070786604,0.0001529607,0.00003130624,0.0001912942],"domain_scores_gemma":[0.9984911,0.000025851226,0.0009682788,0.00022650408,0.0002618401,0.000026403028],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022245651,0.00017277703,0.0004971079,0.00015227882,0.00005358735,0.00003080086,0.00022160432,0.0002469332,0.0012032869],"category_scores_gemma":[0.000039346807,0.00014007621,0.0001745333,0.00009118204,0.000050410003,0.00036601542,0.00006195007,0.00030729818,0.00016282118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000642501,0.000113123126,0.0037468707,0.00003301758,0.00020186878,0.0000012199556,0.00028177255,0.0000018964325,0.9941258,0.0000416615,0.00005712204,0.00075315183],"study_design_scores_gemma":[0.0017565658,0.00037904133,0.086569905,0.00010472586,0.00005856126,0.00008229088,0.000035590114,0.000005479257,0.9073951,0.00008338199,0.0033919022,0.00013743692],"about_ca_topic_score_codex":0.000052083604,"about_ca_topic_score_gemma":0.000001854024,"teacher_disagreement_score":0.086730674,"about_ca_system_score_codex":0.000050058163,"about_ca_system_score_gemma":0.00009644394,"threshold_uncertainty_score":0.9997097},"labels":[],"label_agreement":null},{"id":"W2912039192","doi":"10.1001/jamapediatrics.2018.5139","title":"Extending Antenatal Pertussis Immunization to Second Trimester or At-Birth Pertussis Immunization of Premature Infants?","year":2019,"lang":"en","type":"letter","venue":"JAMA Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Otorhinolaryngology; Family medicine; Neurology; Pediatrics; Psychiatry","score_opus":0.011179994845322441,"score_gpt":0.23573171321446393,"score_spread":0.22455171836914148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912039192","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9147745,0.00698577,0.00033010682,0.057444554,0.012908079,0.002241462,0.003511239,0.00032107707,0.0014832526],"genre_scores_gemma":[0.3241207,0.008581598,0.00089699175,0.16429704,0.014174681,0.0002747658,0.034382883,0.0008608158,0.45241052],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99735874,0.00037774962,0.00093631813,0.00064268056,0.00008762179,0.0005968866],"domain_scores_gemma":[0.9970493,0.0006286425,0.0008020283,0.00097461167,0.00051362783,0.000031818265],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029840256,0.00058478815,0.00093720184,0.00097330683,0.00031449334,0.00011863309,0.00055692176,0.0027542482,0.0050290837],"category_scores_gemma":[0.00069478,0.00045390218,0.00029267924,0.0009827561,0.000059495655,0.000427846,0.00050312886,0.0015513231,0.00053711864],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058483717,0.000093543116,0.0056014885,0.0007775251,0.00024561473,0.000014212163,0.000685498,0.000008019382,0.034935616,0.000008942058,0.9559188,0.0011259029],"study_design_scores_gemma":[0.0017758716,0.000390907,0.015690383,0.00016485552,0.00034140982,0.00028540482,0.00009078705,0.0000073014226,0.0044912747,0.000005408721,0.97603834,0.0007180762],"about_ca_topic_score_codex":0.000113134105,"about_ca_topic_score_gemma":0.000029801451,"teacher_disagreement_score":0.5906538,"about_ca_system_score_codex":0.00019276337,"about_ca_system_score_gemma":0.00025781023,"threshold_uncertainty_score":0.99979126},"labels":[],"label_agreement":null},{"id":"W2912535963","doi":"10.1016/j.vaccine.2018.12.059","title":"Antibody persistence and booster response in adolescents and young adults 4 and 7.5 years after immunization with 4CMenB vaccine","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; Queen's University; University of Sudbury; University of Toronto","funders":"GlaxoSmithKline foundation","keywords":"Medicine; Booster dose; Meningococcal vaccine; Vaccination; Immunization; Vaccination schedule; Meningococcal disease; Immunology; Pediatrics; Antibody; Neisseria meningitidis; Biology","score_opus":0.0043206482884906704,"score_gpt":0.20979441483830452,"score_spread":0.20547376654981386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912535963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99719805,0.002162281,0.000007805239,0.00014412109,0.00017958177,0.00026574286,0.000007818816,0.000019680456,0.000014899238],"genre_scores_gemma":[0.9991183,0.00037528065,0.000024554427,0.000054204233,0.0000127835265,0.0000055882792,0.00003054662,0.000013858457,0.00036487958],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99930197,0.00009791344,0.0001573983,0.00025994473,0.000011354317,0.00017140963],"domain_scores_gemma":[0.999705,0.00002243663,0.00005064784,0.0001628735,0.000039165217,0.000019888732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001368807,0.00013360573,0.00019881816,0.00014505479,0.00004687485,0.00002584663,0.000038612296,0.00011241418,0.0001277041],"category_scores_gemma":[0.000016259239,0.00010740213,0.000011054535,0.00012221506,0.00001099863,0.00017574019,0.00008233906,0.00012494605,0.000022706763],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007188155,0.000041019714,0.7994363,0.000037589452,0.000020888267,0.0000029606313,0.00056323555,3.2039895e-7,0.19195183,0.0000031246602,0.000010065975,0.00074456265],"study_design_scores_gemma":[0.0048852186,0.0005776618,0.9919288,0.00029314487,0.000020953754,0.00018548021,0.00028345137,0.000011403138,0.00093027414,0.0000026186362,0.00073823007,0.00014275695],"about_ca_topic_score_codex":0.00018583982,"about_ca_topic_score_gemma":0.00018653645,"teacher_disagreement_score":0.19249256,"about_ca_system_score_codex":0.000011423169,"about_ca_system_score_gemma":0.000009606555,"threshold_uncertainty_score":0.43797317},"labels":[],"label_agreement":null},{"id":"W2913419963","doi":"10.33321/cdi.2016.40.42","title":"Paediatric Active Enhanced Disease Surveillance inaugural annual report, 2014","year":2016,"lang":"en","type":"article","venue":"Communicable Diseases Intelligence","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child, Adolescent and Family Mental Health","funders":"Marie Bashir Institute, University of Sydney; Sydney Medical School; National Health and Medical Research Council; Medical Research Council; Australian Government","keywords":"Medicine; Family medicine","score_opus":0.011974858572259932,"score_gpt":0.26922274104503946,"score_spread":0.2572478824727795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913419963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96072435,0.0228177,0.0070955805,0.0011458162,0.003269543,0.0006061711,0.0018964154,0.0005171058,0.0019272909],"genre_scores_gemma":[0.99283683,0.0035981177,0.00002923295,0.00006169545,0.00010069854,0.00009566022,0.00020734259,0.000024644583,0.0030457685],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99820095,0.00042064968,0.0004534844,0.00042033437,0.000034502827,0.0004700954],"domain_scores_gemma":[0.9972632,0.0007216689,0.00023317398,0.0014167149,0.00024040937,0.00012483026],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017165607,0.0002657614,0.0003525788,0.00011108026,0.00037262874,0.00002790223,0.0007229739,0.0001290609,0.0029659765],"category_scores_gemma":[0.0008072823,0.00018741126,0.00019722723,0.00024073775,0.00036585433,0.00037068134,0.00046893497,0.00019806069,0.0011433873],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049010585,0.002787913,0.1608754,0.00014071506,0.0008384794,0.00012602973,0.0005614111,0.000063053216,0.19406709,0.0054289796,0.07083924,0.55937064],"study_design_scores_gemma":[0.0021964458,0.0006732483,0.49560833,0.00033030042,0.00034029435,0.00025382437,0.0011180069,0.000015888665,0.13707317,0.007904364,0.35214135,0.0023447634],"about_ca_topic_score_codex":0.00015636894,"about_ca_topic_score_gemma":0.00004893721,"teacher_disagreement_score":0.55702585,"about_ca_system_score_codex":0.000077067445,"about_ca_system_score_gemma":0.00013798843,"threshold_uncertainty_score":0.9996343},"labels":[],"label_agreement":null},{"id":"W2914204238","doi":"10.1186/s12887-019-1403-0","title":"A systematic review of the diagnostic accuracy of Loop-mediated-isothermal AMPlification (LAMP) in the diagnosis of invasive meningococcal disease in children","year":2019,"lang":"en","type":"review","venue":"BMC Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Public Health Agency; Queen's University Belfast; Health and Social Care Northern Ireland","keywords":"Neisseria meningitidis; Medicine; Loop-mediated isothermal amplification; Nucleic Acid Amplification Tests; Meningococcal disease; Neisseria; Pediatrics; Virology; Bacteria; DNA; Biology; Genetics","score_opus":0.03208766563624947,"score_gpt":0.2965020423380307,"score_spread":0.2644143767017812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914204238","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02573384,0.9681653,0.000003184298,0.000017152379,0.000287169,0.0053155124,0.00046405854,0.000006516762,0.000007294955],"genre_scores_gemma":[0.011397028,0.98701626,0.0000031958443,0.000021264712,0.000052315823,0.0011038324,0.00037019615,0.000023399962,0.000012530568],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.995823,0.0018091897,0.0018237826,0.00027023605,0.00006511498,0.0002086493],"domain_scores_gemma":[0.9868694,0.00979615,0.0023317556,0.0008633789,0.0001236548,0.000015638425],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00096193043,0.00030871198,0.002000561,0.00028038514,0.000032656564,0.000007113999,0.0007732657,0.0003088787,0.000051332703],"category_scores_gemma":[0.01415299,0.0001668555,0.0005587918,0.0010678313,0.00008778241,0.00006271887,0.00014602058,0.0003778446,0.00003482642],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000985383,0.00038646912,0.13565716,0.86245394,0.00011178884,2.0997071e-7,0.00009874018,0.000002006431,0.0000060221782,0.00010272073,0.00019135875,0.0009797299],"study_design_scores_gemma":[0.0014872634,0.00017604753,0.14213689,0.8368935,0.013321683,0.000043551387,0.00007238374,7.6296885e-7,0.000022496793,0.000027777445,0.0051159356,0.0007017022],"about_ca_topic_score_codex":0.00020322487,"about_ca_topic_score_gemma":0.000054942393,"teacher_disagreement_score":0.025560426,"about_ca_system_score_codex":0.000048974343,"about_ca_system_score_gemma":0.00057306455,"threshold_uncertainty_score":0.99415123},"labels":[],"label_agreement":null},{"id":"W2914340433","doi":"10.1080/22221751.2018.1564630","title":"Immunization with whole cell but not acellular pertussis vaccines primes CD4 T <sub>RM</sub> cells that sustain protective immunity against nasal colonization with <i>Bordetella pertussis</i>","year":2019,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Innovative Medicines Initiative; European Commission; Science Foundation Ireland; European Federation of Pharmaceutical Industries and Associations; Bill and Melinda Gates Foundation","keywords":"Bordetella pertussis; Vaccination; Immunity; Immunology; Immunization; Pertussis vaccine; Medicine; Whooping cough; Immune system; Virology; Biology","score_opus":0.004709422804281317,"score_gpt":0.1922156408771276,"score_spread":0.1875062180728463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914340433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917874,0.00053355633,0.003451562,0.00034680945,0.001102813,0.0017188971,0.00008976264,0.00043409673,0.00053510146],"genre_scores_gemma":[0.9951843,0.00035950515,0.00014634893,0.0001230971,0.000099105266,0.00019558422,0.0006704708,0.00013291014,0.0030886987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974626,0.0005182293,0.00049555156,0.00071743364,0.00007144463,0.00073476054],"domain_scores_gemma":[0.99788207,0.00017409305,0.00045468562,0.000751289,0.0006741948,0.00006369317],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0003046375,0.0006376929,0.0005964184,0.0004972516,0.0015340965,0.00018234114,0.00028677867,0.00045129666,0.0003613579],"category_scores_gemma":[0.000043296383,0.000521257,0.0001781717,0.001039798,0.00017607243,0.00061150885,0.00019298235,0.00077185454,0.00038124283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034750794,0.0006728236,0.016917476,0.00010350029,0.00037143525,0.0000021384942,0.0010620789,0.0020937498,0.9770108,0.000028947341,0.00063243706,0.00075714785],"study_design_scores_gemma":[0.002513738,0.00090071955,0.008329932,0.00016492736,0.0002220718,0.000091246024,0.0013063448,0.000065504064,0.9637501,0.0000070814144,0.021912325,0.00073599885],"about_ca_topic_score_codex":0.0010763679,"about_ca_topic_score_gemma":0.00042997522,"teacher_disagreement_score":0.021279888,"about_ca_system_score_codex":0.00023257035,"about_ca_system_score_gemma":0.00028979106,"threshold_uncertainty_score":0.99976575},"labels":[],"label_agreement":null},{"id":"W2915338253","doi":"10.3791/58930","title":"Evaluation of Host-Pathogen Responses and Vaccine Efficacy in Mice","year":2019,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; Ohio State University","keywords":"Vaccine efficacy; Immunology; Bordetella pertussis; Adjuvant; Immunity; Medicine; Immune system; Vaccination; Immunization; Infectious disease (medical specialty); Virology; Disease; Biology; Bacteria","score_opus":0.041160237544915684,"score_gpt":0.42698934646507414,"score_spread":0.3858291089201584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915338253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942853,0.0046911826,0.000003878387,0.000034581346,0.00069153,0.00018831427,0.000004343952,0.0000031761513,0.00009768594],"genre_scores_gemma":[0.99963206,0.00013781569,0.00006845182,0.000013851072,0.000024098832,0.0000029333403,0.0000037458958,0.000007135625,0.00010992828],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987927,0.00050404284,0.00046018217,0.00008927784,0.000050813916,0.00010296557],"domain_scores_gemma":[0.99917436,0.00010464627,0.00033602986,0.00008435078,0.00028689238,0.0000137509915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012746202,0.00008523633,0.00029583517,0.00022585278,0.000022698649,0.000007329638,0.000069436916,0.00009477517,0.00067240203],"category_scores_gemma":[0.00019078385,0.000068050445,0.000054383298,0.000100051715,0.0000135912505,0.00012495102,0.000031532003,0.000095571726,0.000019750063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012701077,0.0004131601,0.007873281,0.000005532179,0.00011303273,4.7208945e-7,0.00056977366,0.0000021877543,0.98834044,0.000026078065,0.00008723794,0.00129871],"study_design_scores_gemma":[0.0116792405,0.00068425713,0.15799142,0.000095059964,0.00008359756,0.0000875652,0.00033093515,0.000008126426,0.8269455,0.000021040436,0.00199345,0.0000798018],"about_ca_topic_score_codex":0.000036249166,"about_ca_topic_score_gemma":0.0000025942863,"teacher_disagreement_score":0.16139492,"about_ca_system_score_codex":0.000040643325,"about_ca_system_score_gemma":0.00007129219,"threshold_uncertainty_score":0.73623306},"labels":[],"label_agreement":null},{"id":"W2916362363","doi":"10.1093/cid/ciz143","title":"Seroprotection at Different Levels of the Healthcare System After Routine Vaccination With Diphtheria-Tetanus-Pertussis whole cell–Hepatitis B–Haemophilus influenzae Type B in Lao People’s Democratic Republic","year":2019,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Universitaire de la Francophonie","keywords":"Medicine; Vaccination; Hepatitis B vaccine; Diphtheria; Hepatitis B; Vaccine-preventable diseases; Seroconversion; Pediatrics; Hepatitis A vaccine; Environmental health; Hepatitis A; Immunology; Hepatitis B virus; Hepatitis; Antibody; Virus; HBsAg","score_opus":0.01718559573300976,"score_gpt":0.2706412184083799,"score_spread":0.25345562267537014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916362363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99579424,0.00063053926,0.000017060991,0.00030706497,0.0019218648,0.000988117,0.00013127991,0.000119459815,0.00009037509],"genre_scores_gemma":[0.99884146,0.00006413021,0.000001458125,0.00011786474,0.000088846224,0.00013877923,0.000049044575,0.00003293546,0.0006654821],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99753064,0.00083677314,0.0008218768,0.00044937644,0.00005552293,0.00030582567],"domain_scores_gemma":[0.9983527,0.00029210254,0.0004455613,0.0005798346,0.00027174983,0.00005802284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021357575,0.00026798152,0.00063642306,0.0001247486,0.0001964511,0.000031627016,0.00014985111,0.00031744447,0.0005852138],"category_scores_gemma":[0.00020497564,0.00016928778,0.00020732205,0.0004779613,0.000066057924,0.00016456158,0.00015149247,0.00033465636,0.00012215],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003762491,0.0004943553,0.99381953,0.00029617487,0.00010029473,9.2867384e-7,0.000088726476,0.0000389689,0.0035541651,0.00003916788,0.00009155615,0.0010999042],"study_design_scores_gemma":[0.0022357837,0.0009504131,0.9947459,0.00022902162,0.00011568676,0.000023426199,0.00006435763,0.000033978173,0.0011094394,0.00005101585,0.00023426797,0.00020667411],"about_ca_topic_score_codex":0.0009544186,"about_ca_topic_score_gemma":0.0048546907,"teacher_disagreement_score":0.003900272,"about_ca_system_score_codex":0.00024681998,"about_ca_system_score_gemma":0.000093847484,"threshold_uncertainty_score":0.6903356},"labels":[],"label_agreement":null},{"id":"W2917355774","doi":"10.3389/fimmu.2019.00247","title":"Utility of Hybrid Transferrin Binding Protein Antigens for Protection Against Pathogenic Neisseria Species","year":2019,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Alberta Innovates; Alberta Innovates - Health Solutions","keywords":"Bacterial outer membrane; Antigen; Transferrin; Neisseria; Microbiology; Transferrin receptor; Biology; Epitope; Integral membrane protein; Membrane protein; Chemistry; Escherichia coli; Biochemistry; Bacteria; Membrane; Gene; Immunology","score_opus":0.014997413545652372,"score_gpt":0.21753166088733075,"score_spread":0.20253424734167838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2917355774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883009,0.0008808162,0.003941254,0.00006939627,0.004594724,0.0017551362,0.000118123135,0.000053234984,0.00028638565],"genre_scores_gemma":[0.9972369,0.000104893916,0.00046110453,0.000005119369,0.000023997105,0.00016407616,0.00013060721,0.000020901762,0.0018524193],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986099,0.00019004369,0.00046269977,0.00033769658,0.000010291195,0.00038935323],"domain_scores_gemma":[0.999434,0.000025120298,0.0001443192,0.00031423388,0.00007337383,0.000008965057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002536515,0.00019011766,0.0005055764,0.0003216636,0.00009913565,0.000008242622,0.00018381419,0.00024550836,0.00032198871],"category_scores_gemma":[0.000057208792,0.00018590724,0.0001586481,0.00020396122,0.00014488572,0.000117296615,0.000037173126,0.00026165223,0.000041315452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079415983,0.0001358442,0.014956674,0.000064852036,0.00017236105,3.2413368e-7,0.000095516305,0.0000023406787,0.977802,0.00023568752,0.0002904555,0.005449794],"study_design_scores_gemma":[0.0026151573,0.0005310184,0.0336485,0.00006712761,0.000021354163,0.00002297912,0.00044325698,0.000036520018,0.9312316,0.0002691555,0.030879745,0.00023355782],"about_ca_topic_score_codex":0.000072039984,"about_ca_topic_score_gemma":0.000042024036,"teacher_disagreement_score":0.046570364,"about_ca_system_score_codex":0.0000406279,"about_ca_system_score_gemma":0.00006573234,"threshold_uncertainty_score":0.75810766},"labels":[],"label_agreement":null},{"id":"W2921148887","doi":"10.1007/978-1-4939-9202-7_11","title":"Modeling Neisseria meningitidis Infection in Mice: Methods and Logistical Considerations for Nasal Colonization and Invasive Disease","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Colonization; Disease; Immunology; Sepsis; Carriage; Immune system; Neisseriaceae; Medicine; Meningococcal vaccine; Biology; Microbiology; Intensive care medicine; Antibiotics; Bacteria; Internal medicine; Immunization","score_opus":0.037740566379697436,"score_gpt":0.40077501949383065,"score_spread":0.36303445311413324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921148887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53075427,0.0005305951,0.46790588,0.00012326866,0.00033011462,0.00031841657,0.00000971208,0.000012914208,0.00001479739],"genre_scores_gemma":[0.6744034,0.00012505396,0.3251711,0.00008599587,0.000012295783,0.0001041687,0.00007009188,0.000011636624,0.000016205619],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977419,0.0013940874,0.00029694883,0.0003541757,0.0000040908803,0.0002088269],"domain_scores_gemma":[0.9987715,0.00097470556,0.000053088996,0.000111091475,0.00006509844,0.000024542493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008698818,0.00013734354,0.00029504616,0.000203609,0.00007973191,0.000019822493,0.000029552522,0.00027773363,0.00005301642],"category_scores_gemma":[0.0020996265,0.00013333804,0.00003364114,0.00012311155,0.000094188115,0.000054174136,0.000068386784,0.00016036283,0.0000019847332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117992844,0.000039245344,0.025444753,0.000029767813,0.00003082881,6.592899e-7,0.000083629704,0.00051121716,0.9515052,0.020872975,0.000002860945,0.0013608779],"study_design_scores_gemma":[0.010134735,0.0015221738,0.05880304,0.00017216445,0.0002944362,0.00023019244,0.00026754843,0.0616571,0.5587219,0.3053852,0.0015291425,0.00128239],"about_ca_topic_score_codex":0.0002758456,"about_ca_topic_score_gemma":0.00020091885,"teacher_disagreement_score":0.3927833,"about_ca_system_score_codex":0.000027843194,"about_ca_system_score_gemma":0.000057209498,"threshold_uncertainty_score":0.5437367},"labels":[],"label_agreement":null},{"id":"W2923043774","doi":"10.1007/s00701-019-03875-8","title":"Diffusion-weighted magnetic resonance imaging for detection of postoperative intracranial pyogenic abscesses in neurosurgery","year":2019,"lang":"en","type":"article","venue":"Acta Neurochirurgica","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Magnetic resonance imaging; Neuroradiology; Neurosurgery; Diffusion MRI; Abscess; Effective diffusion coefficient; Neurology; Interventional radiology; Radiology; Nuclear medicine; Surgery","score_opus":0.006237840634848175,"score_gpt":0.2179451487840721,"score_spread":0.21170730814922392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2923043774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996416,0.00097099866,0.000011349626,0.00030153172,0.0016051439,0.00043785374,0.00003159165,0.000041501382,0.00018404389],"genre_scores_gemma":[0.9991899,0.00017659648,0.0000098243745,0.00012660702,0.00003334595,0.000040022052,0.000021005,0.00002111903,0.00038155608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989702,0.00011588725,0.0003441312,0.00030497863,0.000016556225,0.00024823836],"domain_scores_gemma":[0.9992594,0.00032676136,0.00011374194,0.00020789939,0.00007863371,0.000013525873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008395727,0.00015713273,0.00028848837,0.0001701112,0.00009575229,0.000015911177,0.000119561904,0.000099496,0.00036695317],"category_scores_gemma":[0.000076167715,0.00013860995,0.00009402753,0.00022814458,0.000048430487,0.00013401342,0.000052677304,0.00017967544,0.000038053626],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066929555,0.00013354365,0.005387405,0.000013647749,0.000004704922,0.0000019373285,0.00007066802,8.5920954e-7,0.98091036,0.00003592382,0.00009011696,0.012681509],"study_design_scores_gemma":[0.0052868146,0.0011146037,0.29606533,0.000082949206,0.000038535232,0.00028607537,0.000078027275,0.0003106771,0.603468,0.00015839704,0.0926884,0.00042216785],"about_ca_topic_score_codex":0.000099524164,"about_ca_topic_score_gemma":0.00003905591,"teacher_disagreement_score":0.37744236,"about_ca_system_score_codex":0.000012404776,"about_ca_system_score_gemma":0.000025416783,"threshold_uncertainty_score":0.56523496},"labels":[],"label_agreement":null},{"id":"W2928730275","doi":"10.1016/j.vaccine.2019.02.047","title":"Pertussis vaccine effectiveness in a frequency matched population-based case-control Canadian Immunization Research Network study in Ontario, Canada 2009–2015","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Alberta Health; Alberta Health Services; Provincial Laboratory of Public Health; University of Calgary; University of Alberta; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research; Kaiser Permanente; Sanofi Pasteur; Public Health Agency; Public Health Agency of Canada; Institut pour la Recherche en Santé Publique","keywords":"Medicine; Pediatrics; Odds ratio; Population; Confidence interval; Booster dose; Immunization; Pertussis vaccine; Incidence (geometry); Logistic regression; Demography; Immunology; Internal medicine; Environmental health","score_opus":0.013854145121612881,"score_gpt":0.2631219996070229,"score_spread":0.24926785448541006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2928730275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962267,0.00039394168,0.0000062900763,0.00036359575,0.0011040602,0.0017447321,0.00003601342,0.000023389977,0.000101254795],"genre_scores_gemma":[0.9992126,0.0000028766772,0.000013939566,0.00006673367,0.00004538522,0.00009947717,0.0002711048,0.000029231838,0.00025859868],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99697316,0.0012487246,0.00051217317,0.00042693215,0.00004538046,0.000793614],"domain_scores_gemma":[0.99862146,0.0005194903,0.00008733121,0.00048533225,0.00022091364,0.00006547612],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016062642,0.0002377392,0.00053612597,0.00062346424,0.00027781274,0.00003186483,0.00019110057,0.00024461598,0.0032671813],"category_scores_gemma":[0.00013368709,0.00021972926,0.00003913071,0.0011120248,0.000003272762,0.00013638068,0.00003701004,0.00067639706,0.00006030563],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003393833,0.00019314047,0.99273795,0.0000149373145,0.00006875788,0.000092516464,0.0001552264,0.0023542051,0.003319757,0.00004192052,0.0005434967,0.00013869115],"study_design_scores_gemma":[0.0070027066,0.00030470727,0.9912599,0.000074522366,0.000022738903,0.00006679994,0.00024075473,0.00009437412,0.00006668817,0.00005478044,0.0005840366,0.00022801514],"about_ca_topic_score_codex":0.99990964,"about_ca_topic_score_gemma":0.9999924,"teacher_disagreement_score":0.0066633234,"about_ca_system_score_codex":0.0020572713,"about_ca_system_score_gemma":0.0018290477,"threshold_uncertainty_score":0.99764395},"labels":[],"label_agreement":null},{"id":"W2935914238","doi":"10.3389/fimmu.2019.00683","title":"Exploitation of Neisseria meningitidis Group B OMV Vaccines Against N. gonorrhoeae to Inform the Development and Deployment of Effective Gonorrhea Vaccines","year":2019,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gonorrhea; Neisseria gonorrhoeae; Neisseria meningitidis; Meningococcal vaccine; Meningococcal disease; Medicine; Immunology; Neisseria; Disease; Immune system; Virology; Biology; Immunization; Microbiology; Internal medicine; Bacteria","score_opus":0.018939867344736818,"score_gpt":0.2706598369048567,"score_spread":0.2517199695601199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2935914238","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.100331455,0.89227283,0.00027751684,0.000032117336,0.004677237,0.0022206916,0.000042168693,0.000032276308,0.00011370512],"genre_scores_gemma":[0.005990493,0.9911339,0.0010253473,0.000019053696,0.00004400778,0.00097440556,0.00039432573,0.00007014449,0.00034828504],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99723774,0.00043176013,0.0014063974,0.0004679356,0.000017821,0.0004383651],"domain_scores_gemma":[0.9981058,0.00039798458,0.00082023663,0.0005202314,0.0001343554,0.000021370413],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048224087,0.0005441997,0.0022513038,0.0008153513,0.00014970353,0.000015799444,0.00043949485,0.000647247,0.000042109343],"category_scores_gemma":[0.00015146176,0.0003872711,0.00023457497,0.0006379854,0.00010140075,0.00014893565,0.00033894557,0.00043038276,0.000037057347],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028995587,0.00013276371,0.0014743973,0.0024582434,0.0015598721,2.1644149e-7,0.0013973407,0.0000038084581,0.0017272279,0.00025557118,0.0008345093,0.9898661],"study_design_scores_gemma":[0.0013019624,0.0005693495,0.0075595905,0.0025473994,0.0004150228,0.000034317465,0.00092614134,8.457391e-7,0.0011347028,0.000034180935,0.9850208,0.00045566034],"about_ca_topic_score_codex":0.00012364858,"about_ca_topic_score_gemma":0.0001222518,"teacher_disagreement_score":0.98941046,"about_ca_system_score_codex":0.00018830891,"about_ca_system_score_gemma":0.00017102194,"threshold_uncertainty_score":0.9998579},"labels":[],"label_agreement":null},{"id":"W2936830133","doi":"10.1097/qco.0000000000000548","title":"Advances in molecular diagnostic testing for central nervous system infections","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute for Health and Care Research","keywords":"Medicine; Central nervous system; Diagnostic test; Intensive care medicine; Pediatrics; Internal medicine","score_opus":0.05083799087343476,"score_gpt":0.3562983123387205,"score_spread":0.30546032146528573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2936830133","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029608808,0.963294,0.00029756303,0.0000024096007,0.032387026,0.0026608577,0.0006889235,0.00023955287,0.00013356298],"genre_scores_gemma":[0.0036422473,0.9915618,0.0000037899695,0.0000016594976,0.00046071273,0.0026181065,0.0016328094,0.000069354086,0.000009545233],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972446,0.00042032803,0.0009725944,0.0006650514,0.000028183367,0.00066926045],"domain_scores_gemma":[0.99694216,0.0020596478,0.00046589287,0.00036676382,0.000109374116,0.00005613566],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012416777,0.00057027186,0.0015087725,0.000750098,0.00017122141,0.00006377568,0.00019984058,0.00039904556,0.000049533624],"category_scores_gemma":[0.0012597311,0.00052266417,0.0005194607,0.00081419875,0.000064775835,0.00022771413,0.00010370179,0.000519657,0.00014032835],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011305362,0.00090073294,0.020547405,0.0577081,0.000090715315,9.4583675e-7,0.00001789833,0.00020820777,0.0000037376049,0.0015808598,0.00045632973,0.9184738],"study_design_scores_gemma":[0.0011253703,0.00027166915,0.0014227065,0.03311579,0.00040262865,0.00009800047,0.000016606295,0.000007209393,8.178914e-7,0.000078168436,0.96287143,0.00058961567],"about_ca_topic_score_codex":0.00008801027,"about_ca_topic_score_gemma":0.000027728993,"teacher_disagreement_score":0.9624151,"about_ca_system_score_codex":0.00047360454,"about_ca_system_score_gemma":0.00037182687,"threshold_uncertainty_score":0.9997225},"labels":[],"label_agreement":null},{"id":"W2941821118","doi":"10.1186/s12866-019-1438-2","title":"Development of flow cytometry based adherence assay for Neisseria gonorrhoeae using 5′-carboxyfluorosceinsuccidyl ester","year":2019,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Neisseria gonorrhoeae; Biology; Flow cytometry; Microbiology; Parasitology; Immunology; Zoology","score_opus":0.03197721386766765,"score_gpt":0.27310889036043473,"score_spread":0.24113167649276707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941821118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98086995,0.00029295532,0.015412583,0.000009458695,0.0025530588,0.0005958746,0.0001323929,0.000051682524,0.000082037455],"genre_scores_gemma":[0.9630015,0.000002404359,0.035901196,0.000062046354,0.000045310215,0.000043825235,0.0004442576,0.000029618417,0.00046984325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984069,0.00016991167,0.0005581729,0.0004230039,0.0000038994403,0.00043812202],"domain_scores_gemma":[0.9989919,0.00024255109,0.0002596839,0.00035123448,0.00013328712,0.000021330585],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037348038,0.0002568306,0.0005190749,0.00020603873,0.0001270108,0.000011833437,0.00023538708,0.00045409036,0.0016619693],"category_scores_gemma":[0.00005539961,0.00022668015,0.00015821547,0.00016145616,0.00008061557,0.00006702753,0.000087149834,0.00013877697,0.00035035715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029747665,0.000121941586,0.022613635,0.000100886136,0.00009427217,2.760354e-8,0.00006693736,0.000046445904,0.97516507,0.00005263113,0.00015690617,0.0012837583],"study_design_scores_gemma":[0.0033545124,0.0003674937,0.011925124,0.00007572997,0.000061406616,0.00006129702,0.00007580349,0.0002469941,0.901523,0.000011177965,0.081866145,0.0004313118],"about_ca_topic_score_codex":0.000031903957,"about_ca_topic_score_gemma":0.00011871791,"teacher_disagreement_score":0.081709236,"about_ca_system_score_codex":0.00006319421,"about_ca_system_score_gemma":0.00031256274,"threshold_uncertainty_score":0.99925065},"labels":[],"label_agreement":null},{"id":"W2941824973","doi":"10.1007/s00005-019-00542-9","title":"Conjugation of Meningococcal Lipooligosaccharides Through Their Non-Reducing Terminus Results in Improved Induction a Protective Immune Response","year":2019,"lang":"en","type":"article","venue":"Archivum Immunologiae et Therapiae Experimentalis","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Ministerstwo Edukacji i Nauki","keywords":"Toxoid; Epitope; Chemistry; Oligosaccharide; Glycolipid; Galactose oxidase; Immune system; Galactose; Biochemistry; Antibody; Lipid A; Sugar acids; Lipopolysaccharide; Biology; Immunology; Immunization","score_opus":0.016433179076526507,"score_gpt":0.2764217408669213,"score_spread":0.25998856179039476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941824973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99499625,0.0012810293,0.00006428853,0.0003200869,0.0012307271,0.0014706338,0.000108421016,0.00009834873,0.00043023386],"genre_scores_gemma":[0.9987164,0.00013651088,0.00020985243,0.000037450936,0.000028551756,0.0003421701,0.0002071285,0.000038105714,0.00028382556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971801,0.0009650505,0.000833248,0.0005516723,0.00003201995,0.00043788418],"domain_scores_gemma":[0.99843884,0.0003838757,0.00048585839,0.0006057937,0.000071797935,0.00001384886],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008586459,0.0003615248,0.00056830345,0.00030992794,0.00015570733,0.000033021202,0.00031706548,0.00031736246,0.00023058525],"category_scores_gemma":[0.00012706079,0.00029955764,0.00017818727,0.00030720446,0.00026176768,0.0004932066,0.00020138817,0.00054966245,0.00006484348],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011841219,0.0004126345,0.00023744056,0.00001217885,0.0002874866,7.694959e-7,0.022260293,0.000011306902,0.9598174,0.00015676691,0.000018571323,0.0049439487],"study_design_scores_gemma":[0.004832377,0.001972824,0.046656262,0.0001704685,0.0000099333565,0.000060459235,0.005814362,0.000015832124,0.9394068,0.00023431334,0.00052201597,0.00030434088],"about_ca_topic_score_codex":0.0047326162,"about_ca_topic_score_gemma":0.000025839361,"teacher_disagreement_score":0.046418823,"about_ca_system_score_codex":0.00014347413,"about_ca_system_score_gemma":0.000115084455,"threshold_uncertainty_score":0.99994564},"labels":[],"label_agreement":null},{"id":"W2942909712","doi":"10.1101/619502","title":"Two cases of type-a <i>Haemophilus influenzae</i> meningitis within the same week in the same hospital are phylogenetically unrelated but recently exchanged capsule genes","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Serotype; Outbreak; Meningitis; Biology; Haemophilus influenzae; Phylogenetic tree; Transmission (telecommunications); Genome; Virology; Gene; Genetics; Medicine; Pediatrics; Bacteria","score_opus":0.01932243223260925,"score_gpt":0.23001506063347252,"score_spread":0.21069262840086328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942909712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98420775,0.009152667,0.000009625802,0.0005776758,0.00419605,0.0011743183,0.00056027505,0.000112016685,0.0000096051035],"genre_scores_gemma":[0.99825,0.00086443045,0.00013351186,0.00025039405,0.00023987913,0.00015229174,0.0000049414966,0.00008458863,0.000019940717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970972,0.0007164226,0.0008124889,0.0007410728,0.00008705591,0.00054576725],"domain_scores_gemma":[0.9969587,0.00026442876,0.0007990448,0.0013548082,0.0005786147,0.000044419783],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00076401647,0.00057815353,0.0007969169,0.00021208955,0.00023743499,0.000107465145,0.0008498303,0.00080119417,0.000121559424],"category_scores_gemma":[0.00041516827,0.00041100467,0.00017356605,0.00061330944,0.00032823122,0.00008564248,0.0004893315,0.0011586258,0.00013496904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013221773,0.00034219748,0.016511945,0.00012376001,0.00042362584,0.000029474108,0.00014349057,0.0001776789,0.9813229,0.00033220754,0.00045544832,0.0000050849],"study_design_scores_gemma":[0.0029458099,0.00082812493,0.29054263,0.0008827411,0.00054063235,0.000002967589,0.00022351294,0.00002779775,0.69562143,0.000017667895,0.007017827,0.0013488574],"about_ca_topic_score_codex":0.0016728664,"about_ca_topic_score_gemma":0.00013952902,"teacher_disagreement_score":0.28570142,"about_ca_system_score_codex":0.0001028561,"about_ca_system_score_gemma":0.00037118574,"threshold_uncertainty_score":0.9998342},"labels":[],"label_agreement":null},{"id":"W2944388848","doi":"","title":"Rapport final de surveillance de la sécurité de la vaccination des jeunes de 20 ans et moins contre le méningocoque de sérogroupe B au Saguenay-Lac-Saint-Jean / auteurs, Gaston De Serres [et cinq autres] ; avec la collaboration de Hélène Gagné [et huit autres]","year":2016,"lang":"fr","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Humanities; Political science; Art","score_opus":0.011890834850632272,"score_gpt":0.27617475454509677,"score_spread":0.2642839196944645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944388848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9396349,0.0030574328,0.040204633,0.013863501,0.00060312875,0.00058083294,0.00031475778,0.00035939395,0.0013814108],"genre_scores_gemma":[0.95170254,0.007688636,0.0027867842,0.00094657147,0.00035567855,0.00021241837,0.00032462968,0.0001206488,0.03586211],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.988355,0.008124161,0.000805047,0.000740173,0.000075374206,0.0019002905],"domain_scores_gemma":[0.99527633,0.0030599101,0.00047272403,0.0005004336,0.00038154863,0.00030905398],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.006545299,0.00071668567,0.00074941805,0.0003490712,0.00081865303,0.00048670237,0.00042510033,0.0015623729,0.0010770397],"category_scores_gemma":[0.0012657518,0.00066929153,0.00026809145,0.00047748696,0.00049100374,0.0009463624,0.00017135727,0.00085515616,0.000041220293],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086430483,0.0011329057,0.58903545,0.0001862515,0.00040192239,0.00007649332,0.0055110757,0.0006766923,0.34833467,0.026069367,0.020900423,0.0068104626],"study_design_scores_gemma":[0.007526709,0.00074189587,0.75431067,0.00071752304,0.00023954829,0.0029874216,0.0027778829,0.0016315893,0.05367183,0.0040412876,0.1703068,0.0010468491],"about_ca_topic_score_codex":0.039481413,"about_ca_topic_score_gemma":0.1109758,"teacher_disagreement_score":0.29466283,"about_ca_system_score_codex":0.0010603622,"about_ca_system_score_gemma":0.0037294864,"threshold_uncertainty_score":0.9998361},"labels":[],"label_agreement":null},{"id":"W2945848340","doi":"10.1136/bmjopen-2018-026953","title":"Adverse events following immunisation with four-component meningococcal serogroup B vaccine (4CMenB): interaction with co-administration of routine infant vaccines and risk of recurrence in European randomised controlled trials","year":2019,"lang":"en","type":"article","venue":"BMJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; Centre intégré universitaire de santé et de services sociaux de la Capitale-Nationale; Centres Intégré Universitaires de Santé et de Services Sociaux; Institut National de Santé Publique du Québec; Université Laval","funders":"Institut National de Santé Publique du Québec; Université Laval; GlaxoSmithKline; Pfizer","keywords":"Medicine; Irritability; Pediatrics; Adverse effect; Incidence (geometry); Diphtheria; Vaccination; Internal medicine; Immunology","score_opus":0.039347172701963425,"score_gpt":0.3451968603074492,"score_spread":0.3058496876054858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945848340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99184036,0.000043259275,0.00014368603,0.00004900147,0.00025995995,0.0072994125,0.000016965485,0.00001106356,0.00033629162],"genre_scores_gemma":[0.9992571,0.00004565393,0.00018404929,0.000004347152,0.00001832628,0.0002582897,0.00013864637,0.000013456023,0.000080164304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965201,0.0020271235,0.0010500229,0.0002303538,0.00003633568,0.00013605147],"domain_scores_gemma":[0.99764466,0.0006356629,0.0013577587,0.00024833775,0.000097469274,0.000016124375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004663258,0.00018419183,0.0011808642,0.00015051468,0.000066428656,0.000016752256,0.00014340521,0.00007308134,0.00013547023],"category_scores_gemma":[0.00037051126,0.00011707263,0.000104528845,0.0001325582,0.000014121308,0.00036239668,0.00007577394,0.00014847101,0.000007479189],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.2047244,0.00029646212,0.466637,0.000055728546,0.0011254488,0.0000020958978,0.00067711883,0.000110647714,0.32494023,0.00002540343,0.00001361058,0.0013918432],"study_design_scores_gemma":[0.26007378,0.0027233942,0.7026186,0.0010034234,0.0005462585,0.000077996774,0.0009088217,0.00014729406,0.03147773,0.000010650908,0.00013392685,0.00027812374],"about_ca_topic_score_codex":0.0008564206,"about_ca_topic_score_gemma":0.00032954244,"teacher_disagreement_score":0.2934625,"about_ca_system_score_codex":0.000022197692,"about_ca_system_score_gemma":0.00006168022,"threshold_uncertainty_score":0.47740835},"labels":[],"label_agreement":null},{"id":"W2946466045","doi":"10.1016/j.vaccine.2019.05.036","title":"Natural immunity against Haemophilus influenzae type a and B-cell subpopulations in adult patients with severe chronic kidney disease","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"National Research Council Canada; Canadian Immunization Research Network; Centers for Disease Control and Prevention; Northern Ontario Academic Medicine Association","keywords":"Immunology; Kidney disease; Antibody; B cell; Haemophilus influenzae; Immunity; CD19; Immunoglobulin M; Immunization; Medicine; Biology; Immunoglobulin G; Immune system; Internal medicine; Microbiology","score_opus":0.004899496622764706,"score_gpt":0.2096691573753547,"score_spread":0.20476966075258998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946466045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980458,0.0006229592,3.6939414e-7,0.00016634143,0.0005885362,0.00035245786,0.000054590604,0.000039391027,0.00012955673],"genre_scores_gemma":[0.99827635,0.000065945685,0.00000967534,0.00019234397,0.000026921272,0.000006264919,0.00076985074,0.000015047772,0.00063757034],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99933475,0.0000647275,0.00017848444,0.00019974989,0.000013177314,0.0002091197],"domain_scores_gemma":[0.99944407,0.000026501228,0.00006972535,0.00025500273,0.0001604615,0.00004421327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000036150195,0.00015189263,0.00019032066,0.00011502369,0.00010629048,0.000015425137,0.00007717315,0.000094011484,0.00030640286],"category_scores_gemma":[0.00005793792,0.0001162317,0.000022378468,0.00026570502,0.000009391227,0.0001677448,0.00006943337,0.00024092718,0.00016088455],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067748415,0.00020640805,0.97575355,0.00004687577,0.000036319525,7.279168e-7,0.000055720655,0.000028565999,0.021943687,0.00005511391,0.00062055734,0.00057500304],"study_design_scores_gemma":[0.0068409275,0.00022351669,0.9858531,0.00007157917,0.000025696401,0.000004059106,0.000013249102,0.000022452265,0.0003934034,0.00001325902,0.0063541206,0.00018464097],"about_ca_topic_score_codex":0.00037839075,"about_ca_topic_score_gemma":0.00032925687,"teacher_disagreement_score":0.021550283,"about_ca_system_score_codex":0.000051843967,"about_ca_system_score_gemma":0.000086846485,"threshold_uncertainty_score":0.4739791},"labels":[],"label_agreement":null},{"id":"W2946984536","doi":"10.1186/s12955-019-1159-0","title":"A DELPHI study on aspects of study design to overcome knowledge gaps on the burden of disease caused by serogroup B invasive meningococcal disease","year":2019,"lang":"en","type":"article","venue":"Health and Quality of Life Outcomes","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"GlaxoSmithKline Biologicals; GlaxoSmithKline","keywords":"Delphi method; Quality of life (healthcare); Delphi; Medicine; Disease; Public health; Disease burden; Psychology; Actuarial science; Nursing; Pathology; Business; Computer science","score_opus":0.09745222137829875,"score_gpt":0.3726664352231034,"score_spread":0.27521421384480466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946984536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943757,0.0005526928,0.000008714575,0.0021213877,0.00025991953,0.0024792454,0.00015785884,0.000018146311,0.000026341284],"genre_scores_gemma":[0.9992622,0.000023236465,0.000002843426,0.00043807665,0.000022510889,0.00006438779,0.00001809802,0.000012035679,0.00015657135],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970902,0.0015865074,0.0007207956,0.0002971483,0.000061922714,0.00024341374],"domain_scores_gemma":[0.99728835,0.0015665354,0.00036898858,0.00047353486,0.0000990509,0.00020352122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011027468,0.00020000861,0.0007698332,0.00011390053,0.00013597167,0.0000075485536,0.00015573889,0.000054625794,0.000085972104],"category_scores_gemma":[0.0007321747,0.00013031533,0.00009779556,0.00014661765,0.0000651533,0.000039467046,0.00008862674,0.00014095355,0.000028257029],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004609139,0.005246281,0.96282804,0.00041023723,0.0004530174,3.3782175e-7,0.015835946,0.000012442436,0.0076937512,0.0014706455,0.0012967875,0.0001434033],"study_design_scores_gemma":[0.0036327848,0.005745784,0.9804461,0.00009903535,0.00005302024,8.875908e-8,0.009074203,8.1425134e-7,0.0005044042,0.000046798654,0.0002504601,0.00014647975],"about_ca_topic_score_codex":0.0019070938,"about_ca_topic_score_gemma":0.0001378356,"teacher_disagreement_score":0.017618116,"about_ca_system_score_codex":0.000027690594,"about_ca_system_score_gemma":0.0003027517,"threshold_uncertainty_score":0.53141046},"labels":[],"label_agreement":null},{"id":"W2947036080","doi":"10.1016/j.vaccine.2019.05.067","title":"Acellular pertussis vaccine effectiveness and waning immunity in Alberta, Canada: 2010–2015, a Canadian Immunization Research Network (CIRN) study","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canada Research Chairs; Public Health Ontario; University of Toronto; University of Manitoba; Alberta Health; Ministry of Health; Provincial Laboratory of Public Health; Alberta Health Services; Toronto Public Health; University of Alberta Hospital; University of Alberta; University of Calgary","funders":"Canadian Institutes of Health Research; Canadian Immunization Research Network; University of Calgary","keywords":"Medicine; Vaccination; Bordetella pertussis; Odds ratio; Incidence (geometry); Immunization; Pertussis vaccine; Pediatrics; Confidence interval; Demography; Immunology; Internal medicine; Immune system","score_opus":0.013939043313331366,"score_gpt":0.26005667633490115,"score_spread":0.24611763302156978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947036080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994879,0.0016514426,0.0000036501965,0.0008066167,0.0013862287,0.0010570764,0.000010629317,0.000020269239,0.00018508383],"genre_scores_gemma":[0.99777436,0.000094614225,0.0000055547716,0.00003359991,0.00007117132,0.000039114595,0.00012966263,0.0000334593,0.0018184669],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99716955,0.0012459401,0.00035905596,0.00040271715,0.000038944698,0.0007838129],"domain_scores_gemma":[0.998486,0.0006016057,0.00007364266,0.0005384311,0.00022265165,0.00007766353],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001615302,0.00023901611,0.0004753469,0.0003757698,0.0005853358,0.000042544892,0.00024033825,0.0002281288,0.0010086914],"category_scores_gemma":[0.0001878304,0.00021390224,0.000030660667,0.0008355815,0.000009272132,0.0001628452,0.0002121457,0.00068764965,0.000106954736],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034045114,0.00016611532,0.9628807,0.00003281472,0.00016795092,0.000006581169,0.00046874417,0.000119135075,0.031687777,0.00013541091,0.0029527335,0.0010415899],"study_design_scores_gemma":[0.0032654656,0.0003572638,0.97715497,0.00008464445,0.000028692604,0.00003194717,0.0007040606,0.00004246799,0.0010573509,0.000029723462,0.017001454,0.00024195598],"about_ca_topic_score_codex":0.99703044,"about_ca_topic_score_gemma":0.9983196,"teacher_disagreement_score":0.030630426,"about_ca_system_score_codex":0.00038308144,"about_ca_system_score_gemma":0.000566571,"threshold_uncertainty_score":0.9999045},"labels":[],"label_agreement":null},{"id":"W2947636299","doi":"10.1186/s12887-018-1374-6","title":"Factors associated with uptake of Haemophilus influenzae type b vaccination in Shanghai, China","year":2019,"lang":"en","type":"article","venue":"BMC Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"UNICEF","keywords":"Medicine; Hib vaccine; Vaccination; Immunization; Haemophilus influenzae; Pediatrics; Retrospective cohort study; Cohort; Psychological intervention; Cohort study; Environmental health; Immunology; Internal medicine; Conjugate vaccine; Nursing","score_opus":0.028261071949327744,"score_gpt":0.2523030413676608,"score_spread":0.22404196941833304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947636299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981274,0.00033926728,0.000011948883,0.0000075934186,0.00080643507,0.00019795277,0.000028352664,0.00003833831,0.00044268538],"genre_scores_gemma":[0.99922943,0.000029853138,0.000012258428,0.0000062386507,0.00003349565,0.0000031261247,0.00015166892,0.000012519298,0.000521412],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993409,0.00006240591,0.00024772476,0.00015407044,0.000019683983,0.00017524563],"domain_scores_gemma":[0.9994598,0.00009849633,0.00017390688,0.00015115383,0.000105949635,0.00001066866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014630423,0.00012062585,0.0002302057,0.00021643481,0.0000349193,0.0000075053936,0.000090557834,0.00022241152,0.000503104],"category_scores_gemma":[0.00019173909,0.00009212373,0.00003941524,0.00055827067,0.000009544059,0.00010814699,0.00003274204,0.00014902446,0.000055646786],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076879776,0.00012435412,0.99038696,0.000023851662,0.000022196593,1.14526785e-7,0.0001648706,0.00007405248,0.008539442,0.0001353632,0.00020509472,0.00024678995],"study_design_scores_gemma":[0.0012283974,0.00029357494,0.99615926,0.000009070699,0.000031933218,0.0000010289281,0.000049773127,0.0000063818115,0.0014322099,0.00003480359,0.0006413215,0.00011225737],"about_ca_topic_score_codex":0.00015021523,"about_ca_topic_score_gemma":0.00039647892,"teacher_disagreement_score":0.0071072327,"about_ca_system_score_codex":0.000045568144,"about_ca_system_score_gemma":0.000080090096,"threshold_uncertainty_score":0.55086356},"labels":[],"label_agreement":null},{"id":"W2950909361","doi":"10.1016/j.vaccine.2019.06.021","title":"Impact of a mass vaccination campaign against Serogroup B meningococcal disease in the Saguenay-Lac-Saint-Jean region of Quebec four years after its launch","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Centre hospitalier universitaire de Québec; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Institut National de Santé Publique du Québec; Université Laval","funders":"","keywords":"Meningococcal disease; Mass vaccination; SAINT; Vaccination; Medicine; Virology; Meningococcal vaccine; Demography; Geography; Neisseria meningitidis; History; Geology; Immunology; Immunization","score_opus":0.011359940233216403,"score_gpt":0.24554651410291703,"score_spread":0.23418657386970063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950909361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838054,0.0004180353,0.000030731146,0.00030325557,0.0002667582,0.00051484077,0.000024573814,0.000021884398,0.00003940239],"genre_scores_gemma":[0.9988676,0.00005620988,0.0000069787025,0.00002849315,0.000049574955,0.000026733132,0.000083281186,0.00001659875,0.00086458033],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886686,0.00025944013,0.00038053739,0.00021999612,0.000029325434,0.00024384476],"domain_scores_gemma":[0.9991682,0.00012715516,0.00020398955,0.00036394183,0.00011200615,0.000024698757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027507308,0.00017087627,0.0003157378,0.00020364251,0.000028744258,0.000011972945,0.00018163731,0.00015243812,0.0005248903],"category_scores_gemma":[0.00007431548,0.00011628794,0.00017605886,0.00031754005,0.0000070488404,0.00015493152,0.000043595574,0.00018240481,0.00007493296],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017014344,0.00032077217,0.75433815,0.00007791879,0.00014724836,0.000008612692,0.00062317186,0.00023192627,0.23819903,0.00017308911,0.00070390076,0.0034747673],"study_design_scores_gemma":[0.0023050106,0.0003242184,0.99381584,0.000069097354,0.00003902334,0.000009130855,0.000076654054,0.00007087714,0.0018438459,0.000036550126,0.001276653,0.00013312284],"about_ca_topic_score_codex":0.008746051,"about_ca_topic_score_gemma":0.0021137365,"teacher_disagreement_score":0.2394777,"about_ca_system_score_codex":0.000074412405,"about_ca_system_score_gemma":0.000047382277,"threshold_uncertainty_score":0.99785477},"labels":[],"label_agreement":null},{"id":"W2951982707","doi":"10.14745/ccdr.v45i06a01f","title":"Sommaire de la Déclaration du Comité consultatif national de l’immunisation sur la vaccination antigrippale pour la saison 2019-2020","year":2019,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Humanities; Political science; Philosophy","score_opus":0.006595001351280235,"score_gpt":0.21916127061617924,"score_spread":0.212566269264899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951982707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96537954,0.015638035,0.0009117118,0.0035991892,0.0012079892,0.0003863364,0.00032872637,0.000071217146,0.012477273],"genre_scores_gemma":[0.9573651,0.022230664,0.00045366437,0.00013352874,0.00022152763,0.000030785443,0.00039442963,0.000049997947,0.019120304],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966098,0.0018193834,0.00052384706,0.00036695268,0.00008740852,0.0005926187],"domain_scores_gemma":[0.99663615,0.0024190973,0.00023994465,0.00019892785,0.00040850075,0.0000973724],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011298583,0.0003759785,0.0004257507,0.00014231291,0.00056773255,0.00013584625,0.00021486994,0.00075177616,0.0018944558],"category_scores_gemma":[0.00034205036,0.00041027326,0.00013782359,0.00028537316,0.00022614343,0.00043511216,0.000029612665,0.0005651615,0.000054812273],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011269834,0.00091221015,0.27823752,0.0057151597,0.0015586013,0.00006594607,0.003819932,0.0040216567,0.4612984,0.03898949,0.15634026,0.047913846],"study_design_scores_gemma":[0.0027305025,0.00012649201,0.62706774,0.0011959124,0.00016123193,0.00088794826,0.0003435079,0.0012883679,0.009965251,0.0007524617,0.35502762,0.0004529577],"about_ca_topic_score_codex":0.32857245,"about_ca_topic_score_gemma":0.49601242,"teacher_disagreement_score":0.45133317,"about_ca_system_score_codex":0.0010635454,"about_ca_system_score_gemma":0.0053622494,"threshold_uncertainty_score":0.9998349},"labels":[],"label_agreement":null},{"id":"W2952445679","doi":"10.14745/ccdr.v45i06a04","title":"Increase in ST-11 serogroup W Neisseria meningitidis invasive meningococcal disease in Canada, 2016–2018","year":2019,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Yukon Health and Social Services; Government of Prince Edward Island; Government of New Brunswick; Public Health Ontario; Dalhousie University; University of Toronto; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; BC Mental Health & Substance Use Services; Memorial University of Newfoundland; Nova Scotia Health Authority; Public Health Agency of Canada","funders":"European Commission; University of Oxford; Public Health Agency; Public Health Agency of Canada; Wellcome Trust","keywords":"Neisseria meningitidis; Serotype; Meningococcal disease; Multilocus sequence typing; Biology; Neisseria; Veterinary medicine; Medicine; Demography; Microbiology; Genotype; Bacteria; Genetics","score_opus":0.009140306762370952,"score_gpt":0.21335377535404942,"score_spread":0.20421346859167847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952445679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994463,0.0021941282,6.275181e-7,0.00056884735,0.0009992525,0.00058163726,0.00035933434,0.000031479445,0.00080168154],"genre_scores_gemma":[0.99606276,0.00011767068,0.0000100054685,0.00023667466,0.000024608968,0.00014159863,0.0014125966,0.00003816142,0.001955903],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975697,0.00038897622,0.0007866582,0.0004915844,0.00006491659,0.000698162],"domain_scores_gemma":[0.9975006,0.00024508516,0.00026245796,0.0015469447,0.00010362918,0.000341257],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030398855,0.0003415077,0.0005819642,0.00014572288,0.0001843965,0.000032524258,0.00050179346,0.0001029457,0.0015964597],"category_scores_gemma":[0.00033735298,0.00034858054,0.00008673791,0.00036309665,0.00006431247,0.00022265439,0.0003723707,0.00041595235,0.000020937608],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004159084,0.00016663433,0.9800828,0.00006985386,0.0000816248,0.000784136,0.000028131091,0.0002204865,0.0049045263,0.00012685721,0.013004012,0.0001149969],"study_design_scores_gemma":[0.0019278947,0.000027857925,0.8396404,0.00028679805,0.00006762421,0.00009713975,0.00046806692,0.000043775766,0.00039113892,0.000050595885,0.1564329,0.00056584063],"about_ca_topic_score_codex":0.9992621,"about_ca_topic_score_gemma":0.99982136,"teacher_disagreement_score":0.14342889,"about_ca_system_score_codex":0.0016073488,"about_ca_system_score_gemma":0.018539822,"threshold_uncertainty_score":0.99989665},"labels":[],"label_agreement":null},{"id":"W2953816098","doi":"10.1139/cjm-2019-0210","title":"Continuing surveillance of invasive <i>Haemophilus influenzae</i> disease in northwestern Ontario emphasizes the importance of serotype a and non-typeable strains as causes of serious disease: a Canadian Immunization Research Network (CIRN) Study","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Agency of Canada; Toronto Public Health; Public Health Ontario; NOSM University; University of Ottawa","funders":"Canadian Immunization Research Network; University of Oxford; Wellcome Trust","keywords":"Haemophilus influenzae; Serotype; Epidemiology; Disease; Pasteurellaceae; Incidence (geometry); Virology; Molecular epidemiology; Medicine; Hib vaccine; Microbiology; Biology; Antibiotics; Genotype; Internal medicine; Genetics; Gene","score_opus":0.015041968660910196,"score_gpt":0.2521618981200952,"score_spread":0.237119929459185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953816098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99529886,0.003315838,3.6728184e-7,0.00012281134,0.0004575456,0.00056524546,0.00020661308,0.0000013940545,0.000031351166],"genre_scores_gemma":[0.99960667,0.000104977706,0.000004103316,0.0000538033,0.000026783235,0.0000044809203,0.00004988622,0.000013666624,0.00013562581],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821687,0.0004618078,0.00066967827,0.00017852281,0.000020213556,0.0004528944],"domain_scores_gemma":[0.9982781,0.0002053775,0.00046643842,0.00030377222,0.000583808,0.00016253184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081743015,0.00015036174,0.0005213204,0.0003548445,0.00012371341,0.000013465709,0.00029836976,0.00013329067,0.00018622729],"category_scores_gemma":[0.00014975929,0.00012211611,0.000065335036,0.00034480894,0.00033408965,0.00009656209,0.000047802092,0.00036235817,0.000004215624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030634637,0.000046511388,0.94905025,0.000035869565,0.00015701372,0.000030113008,0.002711073,0.00022297425,0.04723501,0.00003392416,0.000107678796,0.00006321417],"study_design_scores_gemma":[0.0013853472,0.000603895,0.9945994,0.00019249307,0.000038382797,0.00008738132,0.00091792713,4.3161103e-7,0.0005425204,0.000062251165,0.0014576735,0.00011230918],"about_ca_topic_score_codex":0.7895461,"about_ca_topic_score_gemma":0.99700475,"teacher_disagreement_score":0.20745863,"about_ca_system_score_codex":0.00014901448,"about_ca_system_score_gemma":0.0039702943,"threshold_uncertainty_score":0.70431316},"labels":[],"label_agreement":null},{"id":"W2954624981","doi":"10.1128/msphere.00393-19","title":"Anti-Factor H Antibody Reactivity in Young Adults Vaccinated with a Meningococcal Serogroup B Vaccine Containing Factor H Binding Protein","year":2019,"lang":"en","type":"article","venue":"mSphere","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; McGill University Health Centre; Dalhousie University; BC Children's Hospital; Nova Scotia Health Authority; Izaak Walton Killam Health Centre","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Sanofi Pasteur; Sanofi; National Institutes of Health; National Center for Research Resources; Newcastle University; GlaxoSmithKline; Government of Canada; Akershus Universitetssykehus; National Jewish Health; University of California, San Francisco; Canadian Immunization Research Network; Pfizer","keywords":"Medicine; Immunology; Antibody; Autoantibody; Vaccination; Meningococcal disease; Immunization; Meningitis; Neisseria meningitidis; Meningococcal meningitis; Meningococcal vaccine; Virology; Biology; Bacteria","score_opus":0.008451327692031572,"score_gpt":0.24142612561907242,"score_spread":0.23297479792704084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954624981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975661,0.00010086104,0.000023806062,0.000053510954,0.00052650477,0.0010055447,0.00005071071,0.00018046767,0.0004925071],"genre_scores_gemma":[0.99871194,0.000009080151,0.00004996862,0.000006977654,0.000040514155,0.0000500887,0.00014848285,0.00004366749,0.0009392648],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99839115,0.00017397653,0.00034554407,0.00051107805,0.000029604511,0.00054864003],"domain_scores_gemma":[0.99927795,0.000067076384,0.00020481847,0.00032449243,0.000090453854,0.000035185312],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012677711,0.00032879002,0.0005687306,0.00012847214,0.00014349521,0.000052972882,0.0001655373,0.0003423911,0.0027868932],"category_scores_gemma":[0.000035484038,0.00025866373,0.00007082999,0.00038493556,0.000016416972,0.00039321807,0.000084864725,0.0005263996,0.00037602315],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070553395,0.00011936128,0.43093607,0.000028015362,0.00007001249,0.000004147403,0.0002409684,0.0000014360504,0.5668923,0.00001960884,0.000008370248,0.0009741549],"study_design_scores_gemma":[0.006975932,0.0010604835,0.80997646,0.0004240934,0.00001939836,0.00010074026,0.0006884228,0.00002197589,0.1788038,0.000002959597,0.0014498817,0.00047587816],"about_ca_topic_score_codex":0.0020518254,"about_ca_topic_score_gemma":0.0021163228,"teacher_disagreement_score":0.38808852,"about_ca_system_score_codex":0.00009197385,"about_ca_system_score_gemma":0.00005461596,"threshold_uncertainty_score":0.9999865},"labels":[],"label_agreement":null},{"id":"W295474917","doi":"10.1155/2012/289230","title":"A Vignette‐Based Survey to Assess Clinical Decision Making Regarding Antibiotic Use and Hospitalization of Patients with Probable Aseptic Meningitis","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Queen Elizabeth II Health Sciences Centre","funders":"","keywords":"Vignette; Aseptic meningitis; Medicine; Aseptic processing; Antibiotics; Intensive care medicine; Asepsis; Meningitis; Pediatrics; Psychology; Surgery; Microbiology; Social psychology","score_opus":0.019388026607420634,"score_gpt":0.2760239563620223,"score_spread":0.2566359297546017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W295474917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965148,0.00074429775,0.0012934849,0.000042685057,0.0010772927,0.00017617743,0.00013812365,0.000006590664,0.000006530173],"genre_scores_gemma":[0.9994713,0.000047357255,0.00012724719,0.00020548102,0.00006254588,0.0000013959732,0.000067599736,0.000012958055,0.000004088814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986553,0.0003516645,0.0004926493,0.00015413115,0.000021183094,0.00032502628],"domain_scores_gemma":[0.99833894,0.00055392383,0.00027765366,0.00009631089,0.0003562699,0.00037687705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005532169,0.00013937519,0.00042222577,0.00026347284,0.00014999301,0.000032127824,0.00007217469,0.00023689131,0.00015383582],"category_scores_gemma":[0.0020150659,0.00010252625,0.000060563903,0.00016396049,0.00023708185,0.00017179588,0.000027085309,0.0001766704,0.0000024572942],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023219553,0.00013359608,0.9933882,0.000023642831,0.0001274708,0.0000037325399,0.00002805154,0.0000047785898,0.0009802945,0.000037225105,0.00093871006,0.0041021355],"study_design_scores_gemma":[0.002017765,0.0013031882,0.99328,0.0003746565,0.00012608766,0.00019296659,0.000012543396,0.0000016794639,0.000118142794,0.000008764007,0.0024327284,0.00013146151],"about_ca_topic_score_codex":0.00095070724,"about_ca_topic_score_gemma":0.0052544344,"teacher_disagreement_score":0.004303727,"about_ca_system_score_codex":0.000049040602,"about_ca_system_score_gemma":0.00038677012,"threshold_uncertainty_score":0.41808993},"labels":[],"label_agreement":null},{"id":"W2955991777","doi":"10.1093/cid/ciz531","title":"Asymptomatic Infection and Transmission of Pertussis in Households: A Systematic Review","year":2019,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Institute for Clinical Evaluative Sciences; McGill University; Public Health Ontario; University of Toronto","funders":"Public Health Ontario","keywords":"Asymptomatic; Subclinical infection; Transmission (telecommunications); Medicine; Pediatrics; Disease; Virology; Internal medicine","score_opus":0.06256055612172806,"score_gpt":0.37778310078402266,"score_spread":0.3152225446622946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955991777","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013947333,0.9945461,0.00001353062,0.000010194817,0.0009653253,0.0028009852,0.0000778486,0.00011922908,0.00007204022],"genre_scores_gemma":[0.0011496819,0.998029,0.0000012644884,0.000055424898,0.00004630336,0.00037392337,0.00015422839,0.00005012716,0.00014003731],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99482197,0.0018341318,0.0025266444,0.0005261908,0.00003095128,0.0002601455],"domain_scores_gemma":[0.99648076,0.0017162861,0.0011114369,0.000549381,0.00007777583,0.000064379026],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006692453,0.0004752791,0.0052439827,0.0002670466,0.00007222749,0.000022506183,0.00014418307,0.0007462135,0.00022964946],"category_scores_gemma":[0.0011733904,0.00032654539,0.0011323084,0.0004520631,0.00015344369,0.00011687725,0.00008398232,0.00051606854,0.00018485407],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000048737857,0.00059516047,0.0024956886,0.8821327,0.00053055334,9.578871e-7,0.000007880353,1.1606989e-7,0.0000014676834,0.000033342632,0.00031049963,0.11388677],"study_design_scores_gemma":[0.0008597559,0.00047112055,0.0020151641,0.8402257,0.012105162,0.00009102329,0.0000028231198,0.000001150176,4.3435512e-7,0.000034114215,0.14372893,0.000464649],"about_ca_topic_score_codex":0.00007117789,"about_ca_topic_score_gemma":0.000014294737,"teacher_disagreement_score":0.14341842,"about_ca_system_score_codex":0.00006034455,"about_ca_system_score_gemma":0.00020450933,"threshold_uncertainty_score":0.99991864},"labels":[],"label_agreement":null},{"id":"W2958296129","doi":"10.17615/3yeg-5h22","title":"The transmission of Bordetella pertussis to young infants: identifying close and casual contact sources","year":2019,"lang":"en","type":"article","venue":"Carolina Digital Repository (University of North Carolina at Chapel Hill)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Sanofi Pasteur; IWK Health Centre; Sanofi; Centre National de la Recherche Scientifique; Dalhousie University; Texas Children's Hospital; Children's Hospital of Pittsburgh; University of North Carolina at Chapel Hill; Cincinnati Children's Hospital Medical Center","keywords":"Bordetella pertussis; Casual; Transmission (telecommunications); Virology; Medicine; Biology; Computer science; Bacteria; Telecommunications; Political science; Genetics","score_opus":0.005619251187246178,"score_gpt":0.18852059503350566,"score_spread":0.18290134384625947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2958296129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634033,0.0013416532,0.000017702965,0.000049892576,0.0006713161,0.00029262982,0.00007493396,0.000033630593,0.0011778818],"genre_scores_gemma":[0.9962237,0.0002584255,0.000008231462,0.0000072663006,0.000030156649,5.790271e-7,0.000027920276,0.000014496263,0.0034292475],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989696,0.000084320855,0.00028171224,0.0003398366,0.000057597623,0.00026693972],"domain_scores_gemma":[0.9989824,0.00017657345,0.00023988212,0.0003199701,0.00020343004,0.00007770826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010064786,0.00019647875,0.00039070385,0.00010786172,0.00055828714,0.000024753048,0.00024714926,0.00016867656,0.00002597834],"category_scores_gemma":[0.000028893419,0.00017189828,0.00020129053,0.00016135378,0.00019080937,0.0003073364,0.00022657782,0.00015719379,0.000027714525],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009085906,0.000068435584,0.77018124,0.0000914176,0.00022499476,0.00001267028,0.0033034296,0.000009862415,0.2140642,0.000041968247,0.00009437057,0.010998847],"study_design_scores_gemma":[0.0012714551,0.0005350941,0.96521646,0.00009650456,0.00012311984,0.00035665813,0.0014357601,0.000024770703,0.0117925955,0.000008810733,0.018858973,0.00027982483],"about_ca_topic_score_codex":0.0005207019,"about_ca_topic_score_gemma":0.00032718558,"teacher_disagreement_score":0.2022716,"about_ca_system_score_codex":0.000059672868,"about_ca_system_score_gemma":0.000049670114,"threshold_uncertainty_score":0.7009809},"labels":[],"label_agreement":null},{"id":"W2962103718","doi":"10.1139/cjm-2019-0128","title":"The evolving nature of <i>Bordetella pertussis</i> in Ontario, Canada, 2009–2017: strains with shifting genotypes and pertactin deficiency","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Ontario; Public Health Agency of Canada","funders":"","keywords":"Pertactin; Bordetella pertussis; Genotype; Pertussis toxin; Virulence; Biology; Microbiology; Filamentous haemagglutinin adhesin; Molecular epidemiology; Whooping cough; Pertussis vaccine; Strain (injury); Virology; Gene; Genetics; Antigen; Vaccination; Immunization; Bacteria; G protein","score_opus":0.004643996460034325,"score_gpt":0.17999131576488517,"score_spread":0.17534731930485084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962103718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895401,0.008327865,0.0000011686486,0.00040754228,0.0009861786,0.00009326347,0.00003488397,0.0000012876584,0.0006077075],"genre_scores_gemma":[0.9992478,0.00004592622,0.000026323696,0.00010979714,0.000019008865,5.929159e-7,0.000008483316,0.000008166391,0.00053388794],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990418,0.00010795098,0.00034031802,0.00013535882,0.0000089809,0.00036558893],"domain_scores_gemma":[0.99923635,0.00015390383,0.00025720333,0.0001308478,0.00016642707,0.00005525651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002708691,0.00012966401,0.00029241334,0.00014213202,0.00019602307,0.000018515853,0.00020260594,0.00023700226,0.00042389656],"category_scores_gemma":[0.00007607264,0.000081942184,0.000038151342,0.00010108606,0.00014892903,0.00005752256,0.000015599668,0.00069697545,0.0000026913417],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007792897,0.000013475429,0.3112736,0.00001222232,0.00010019214,0.000016022397,0.00085653743,0.000020309497,0.6838922,0.0001993242,0.0027817504,0.0007564514],"study_design_scores_gemma":[0.0019229369,0.00080063083,0.7473568,0.00019539882,0.0000670858,0.00446926,0.0025233086,0.0000014604683,0.014586334,0.000029749683,0.22768317,0.0003638548],"about_ca_topic_score_codex":0.9247777,"about_ca_topic_score_gemma":0.9994832,"teacher_disagreement_score":0.66930586,"about_ca_system_score_codex":0.00019139423,"about_ca_system_score_gemma":0.0036733882,"threshold_uncertainty_score":0.6516433},"labels":[],"label_agreement":null},{"id":"W2962965489","doi":"10.1007/s40121-019-0254-1","title":"Epidemiologic Trends, Global Shifts in Meningococcal Vaccination Guidelines, and Data Supporting the Use of MenACWY-TT Vaccine: A Review","year":2019,"lang":"en","type":"review","venue":"Infectious Diseases and Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"Pfizer","keywords":"Medicine; Vaccination; Meningococcal vaccine; Meningococcal disease; Pediatrics; Family medicine; Virology; Immunology; Neisseria meningitidis; Immunization; Immune system","score_opus":0.19410213642622032,"score_gpt":0.42688360418480437,"score_spread":0.23278146775858405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962965489","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018834242,0.9954437,0.000011910005,0.00026648623,0.0005200674,0.000993423,0.000799374,0.00004911361,0.000032503365],"genre_scores_gemma":[0.00083075964,0.9972722,0.000010267173,0.00030163597,0.000090225374,0.000102338665,0.0013169895,0.000023968858,0.000051634015],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99686104,0.0008971519,0.001269972,0.0006284555,0.0000260252,0.00031734369],"domain_scores_gemma":[0.997468,0.0006865458,0.00092077645,0.0007818358,0.00010668556,0.000036152647],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007919792,0.00044872213,0.0018469007,0.00014513488,0.00013966218,0.000047340436,0.00029734574,0.00033313205,0.00032250307],"category_scores_gemma":[0.0006108279,0.00025869746,0.0002378055,0.00044677648,0.00004507368,0.00023529034,0.0002948908,0.00027913373,0.00000898487],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029758135,0.000113688155,0.005833398,0.0029620547,0.0003569548,9.0195465e-7,0.0000061569554,6.1643783e-7,0.0000042113243,0.00020456608,0.0070884526,0.9833992],"study_design_scores_gemma":[0.0008839292,0.00018757695,0.008357396,0.003873819,0.0007751879,0.00011578866,0.000003978729,0.000007848649,1.4871006e-7,0.00010585345,0.9854107,0.0002777883],"about_ca_topic_score_codex":0.0006726241,"about_ca_topic_score_gemma":0.00012190365,"teacher_disagreement_score":0.98312145,"about_ca_system_score_codex":0.00004165497,"about_ca_system_score_gemma":0.00011662025,"threshold_uncertainty_score":0.9999865},"labels":[],"label_agreement":null},{"id":"W2963491240","doi":"10.1097/qco.0000000000000580","title":"Meningitis vaccines in children: what have we achieved and where next?","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Michael Smith Health Research BC; Canadian Child Health Clinician Scientist Program","keywords":"Medicine; Streptococcus pneumoniae; Neisseria meningitidis; Meningitis; Meningococcal vaccine; Meningococcal disease; Bacterial meningitis; Pneumococcal conjugate vaccine; Vaccination; Serotype; Outbreak; Group B; Meningococcal meningitis; Immunization; Immunology; Pediatrics; Virology; Antibiotics; Intensive care medicine; Microbiology; Internal medicine; Bacteria; Antigen; Biology","score_opus":0.05085396849634509,"score_gpt":0.3421524199137236,"score_spread":0.2912984514173785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963491240","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004750805,0.9787142,0.0000014166004,0.000026259353,0.014795468,0.0013692123,0.00020336009,0.00011211732,0.000027104006],"genre_scores_gemma":[0.0015674048,0.9960531,5.6592773e-7,0.000003030632,0.00042456246,0.00039268177,0.0014287655,0.000059702477,0.000070212016],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99741834,0.00049177377,0.0008332103,0.00075288495,0.000028013677,0.00047578747],"domain_scores_gemma":[0.99884087,0.00026267755,0.00037998025,0.00041255337,0.00004814941,0.000055775723],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011295796,0.00065477483,0.0016701197,0.00074259454,0.00013641707,0.00025989217,0.0002047401,0.0005354491,0.0004977415],"category_scores_gemma":[0.000072593095,0.00056558714,0.0003532376,0.00038709163,0.00007388093,0.0006849744,0.00023151694,0.00071540265,0.0002700779],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019902014,0.0004889398,0.0634434,0.008728842,0.00020652171,3.114777e-7,0.000061615676,0.0000013711192,0.0000034461918,0.0001252593,0.0021264984,0.9247939],"study_design_scores_gemma":[0.0016754287,0.00014728509,0.011311046,0.03015062,0.0002959084,0.0001828565,0.000058202804,5.1092763e-7,5.330684e-7,0.00007100038,0.95545584,0.000650794],"about_ca_topic_score_codex":0.00014578381,"about_ca_topic_score_gemma":0.00007205762,"teacher_disagreement_score":0.9533293,"about_ca_system_score_codex":0.00013590971,"about_ca_system_score_gemma":0.00016779384,"threshold_uncertainty_score":0.99967957},"labels":[],"label_agreement":null},{"id":"W2968345261","doi":"10.1016/j.vaccine.2019.07.045","title":"Quantifying outcome misclassification in multi-database studies: The case study of pertussis in the ADVANCE project","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Innovative Medicines Initiative; European Commission; Warszawski Uniwersytet Medyczny; European Federation of Pharmaceutical Industries and Associations","keywords":"Bordetella pertussis; Medicine; Medical diagnosis; Incidence (geometry); Database; Pediatrics; Computer science; Mathematics","score_opus":0.1652069694304299,"score_gpt":0.3985861946394444,"score_spread":0.2333792252090145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968345261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967362,0.0013687415,0.000007013932,0.00038314794,0.00042830428,0.0010435254,0.000009118821,0.00001210932,0.000011808947],"genre_scores_gemma":[0.99955165,0.00012085021,0.000023956558,0.000040217616,0.000011946021,0.00007458304,0.000010489963,0.000007078889,0.00015921672],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988249,0.00039431584,0.0004153486,0.00020318254,0.000012591191,0.00014963816],"domain_scores_gemma":[0.9989823,0.00038091984,0.00013670186,0.00044366613,0.000053450425,0.0000029393077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000646187,0.000113549686,0.00025535835,0.0001368937,0.000095246054,0.000007496114,0.00016165311,0.000051396837,0.000042090203],"category_scores_gemma":[0.00017154233,0.00005614718,0.000033607845,0.0004022844,0.000009379414,0.00009624148,0.000059706243,0.00021286754,0.000027842472],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015004032,0.0013256209,0.89512265,0.000059462727,0.00008594713,0.000025221529,0.011728712,0.00002224423,0.089792855,0.00008350567,0.00018014282,0.0014235749],"study_design_scores_gemma":[0.009223851,0.0006949118,0.7245656,0.000098135664,0.00008209959,0.0005657575,0.25649756,0.00013941879,0.0019103707,0.0000039429838,0.005976314,0.00024199906],"about_ca_topic_score_codex":0.004369317,"about_ca_topic_score_gemma":0.017032571,"teacher_disagreement_score":0.24476884,"about_ca_system_score_codex":0.000024043009,"about_ca_system_score_gemma":0.0000145470485,"threshold_uncertainty_score":0.95045745},"labels":[],"label_agreement":null},{"id":"W2969397948","doi":"10.1096/fj.201900669r","title":"The meningococcal vaccine antigen GNA2091 is an analogue of YraP and plays key roles in outer membrane stability and virulence","year":2019,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Health and Medical Research Council; Medical Research Council; Università degli Studi di Siena","keywords":"Operon; Virulence; Bacterial outer membrane; Microbiology; Meningococcal vaccine; Biology; Neisseria meningitidis; Antigen; Biogenesis; Gene; Strain (injury); Regulon; Bacteria; Cell biology; Genetics; Escherichia coli","score_opus":0.0150297801764164,"score_gpt":0.2392684025118861,"score_spread":0.2242386223354697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969397948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975923,0.0013441934,0.000011090192,0.0005974876,0.0002473601,0.00012620982,0.000024847102,0.0000055272626,0.000051026043],"genre_scores_gemma":[0.9987514,0.0010868195,0.0000112195485,0.000046277943,0.000038757044,0.0000018098373,0.000004223613,0.0000054172733,0.00005404682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911886,0.00027507942,0.00027179025,0.00013044418,0.00001727343,0.00018652478],"domain_scores_gemma":[0.99944144,0.00015793704,0.00012751188,0.00019851318,0.000052007712,0.000022591488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082558306,0.00010365989,0.0002024622,0.000056083354,0.0002575799,0.00004186672,0.00015029711,0.000088238616,0.00031177304],"category_scores_gemma":[0.000023301842,0.000053822307,0.00003489607,0.00007650857,0.00010326422,0.00015278287,0.00006999655,0.00030026323,0.000008722455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002536132,0.00003647505,0.15680522,0.0000051220436,0.00005293797,5.123807e-7,0.0010624191,0.0000019036264,0.84044915,0.00011317904,0.00003765484,0.0011818146],"study_design_scores_gemma":[0.0018640693,0.00042527608,0.45580387,0.000042586023,0.000033069537,0.0004890485,0.0012563997,0.000052500876,0.53801566,0.00032713515,0.0015602541,0.00013010956],"about_ca_topic_score_codex":0.00017814036,"about_ca_topic_score_gemma":0.00036106593,"teacher_disagreement_score":0.30243346,"about_ca_system_score_codex":0.0000088647375,"about_ca_system_score_gemma":0.00002312121,"threshold_uncertainty_score":0.34136963},"labels":[],"label_agreement":null},{"id":"W2973320332","doi":"10.1097/inf.0000000000002423","title":"Multiplex Polymerase Chain Reaction Panel for Suspected Pertussis","year":2019,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"Medicine; Mycoplasma pneumoniae; Odds ratio; Internal medicine; Bordetella pertussis; Retrospective cohort study; Confidence interval; Pneumonia; Population; Gastroenterology; Pediatrics; Biology","score_opus":0.01284450201150612,"score_gpt":0.2330511922500529,"score_spread":0.2202066902385468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973320332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922836,0.0011163952,0.00017933491,0.0005976052,0.004883251,0.0005361146,0.00006145915,0.00012495667,0.00021730708],"genre_scores_gemma":[0.9957285,0.0005027508,0.000006402471,0.00012600087,0.001725778,0.000051902225,0.00004209423,0.000029868997,0.0017867358],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99879855,0.00021889017,0.00034062742,0.00021016192,0.00003126089,0.00040048486],"domain_scores_gemma":[0.9988498,0.00034124262,0.00027011646,0.00027004027,0.00018461117,0.00008417741],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033858264,0.00020494145,0.00022416662,0.0002228689,0.0008056643,0.00007593948,0.0001504971,0.00013797868,0.0011735759],"category_scores_gemma":[0.00026232097,0.00013529316,0.0002850515,0.0002501923,0.000034477685,0.00017425322,0.000038732425,0.00040754184,0.00045846862],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018402577,0.0009449467,0.74625224,0.000077362936,0.0005312998,0.0000049814125,0.00037276925,0.000088906505,0.22843261,0.0005380889,0.015783476,0.005133069],"study_design_scores_gemma":[0.013610383,0.0011104672,0.93262595,0.00003070386,0.0018859935,0.0019195783,0.0005255062,0.00024402559,0.0021584055,0.0019491874,0.042864747,0.0010750501],"about_ca_topic_score_codex":0.00013792221,"about_ca_topic_score_gemma":0.000021568561,"teacher_disagreement_score":0.2262742,"about_ca_system_score_codex":0.00009077375,"about_ca_system_score_gemma":0.00015934686,"threshold_uncertainty_score":0.99973947},"labels":[],"label_agreement":null},{"id":"W2974487258","doi":"10.1007/s40121-019-00264-7","title":"Immunological and Clinical Benefits of Maternal Immunization Against Pertussis: A Systematic Review","year":2019,"lang":"en","type":"review","venue":"Infectious Diseases and Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur; Sanofi","keywords":"Medicine; Vaccination; Pregnancy; Immunization; Transplacental; Pertussis vaccine; Whooping cough; Immunology; Systematic review; Pediatrics; Immune system; MEDLINE; Fetus; Placenta","score_opus":0.03814453349855919,"score_gpt":0.32675065042172474,"score_spread":0.28860611692316557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974487258","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013110506,0.98421144,0.0000017940945,0.000008303941,0.0007771089,0.0016294913,0.00015514779,0.000065624314,0.000040584324],"genre_scores_gemma":[0.002493962,0.9969204,8.8941755e-7,0.00007437941,0.00005260227,0.00014071331,0.00019335357,0.000032980814,0.000090691734],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.9975635,0.00076767895,0.0010999609,0.0003554151,0.000021572137,0.00019191441],"domain_scores_gemma":[0.9983616,0.00034968377,0.0007584549,0.00039521753,0.00010202651,0.000033038315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002474302,0.0003889463,0.0028029527,0.00012476505,0.00012973607,0.00004032793,0.00014001167,0.0004573212,0.00012540662],"category_scores_gemma":[0.00011817943,0.00024009291,0.00052026997,0.00014924798,0.00014021971,0.000075023934,0.000097666896,0.0002675049,0.000047033576],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002705018,0.00029716306,0.0014240423,0.34878665,0.0020114535,5.6718216e-7,0.000008150762,5.9475084e-8,0.000009965328,0.00021705215,0.00003873681,0.6471791],"study_design_scores_gemma":[0.0025590705,0.001553416,0.0065979487,0.693739,0.009666186,0.00062340335,0.000014051823,8.384573e-7,0.0000032676933,0.00005232718,0.28424287,0.00094761234],"about_ca_topic_score_codex":0.000037123635,"about_ca_topic_score_gemma":0.0000014729197,"teacher_disagreement_score":0.64623153,"about_ca_system_score_codex":0.00001788632,"about_ca_system_score_gemma":0.00006886076,"threshold_uncertainty_score":0.9790705},"labels":[],"label_agreement":null},{"id":"W2974820613","doi":"10.1007/s40121-019-00265-6","title":"Safety of Maternal Immunization Against Pertussis: A Systematic Review","year":2019,"lang":"en","type":"review","venue":"Infectious Diseases and Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur; Sanofi","keywords":"Medicine; Vaccination; Pregnancy; Transplacental; Tetanus; Immunization; Pediatrics; Whooping cough; Systematic review; MEDLINE; Obstetrics; Immunology; Fetus; Antibody; Placenta","score_opus":0.017500815534916316,"score_gpt":0.28311922206348383,"score_spread":0.2656184065285675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974820613","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003777523,0.9963877,0.0000070253286,0.0000057556686,0.00083239493,0.0019311107,0.00023896064,0.00007056061,0.0001487181],"genre_scores_gemma":[0.0007137725,0.9982829,4.3908054e-7,0.000068908426,0.000042245978,0.00019966262,0.00037818405,0.00004095407,0.00027293962],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99821913,0.0004967803,0.0008286483,0.0002590882,0.000020451926,0.00017588753],"domain_scores_gemma":[0.9985988,0.00014985484,0.0006997605,0.00042909168,0.00009838382,0.000024116043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013715628,0.00036565377,0.0024068244,0.00014741094,0.00012643328,0.000028675207,0.00014239474,0.000260471,0.0003097173],"category_scores_gemma":[0.000047167803,0.00023527227,0.000527184,0.00019346575,0.000055301425,0.00007401055,0.000050142033,0.00016152124,0.0001095266],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019366395,0.00015149347,0.00014300806,0.73778415,0.0015992798,4.7646327e-7,0.000012383005,1.2185934e-7,0.000029687859,0.00013950925,0.00011102446,0.26000953],"study_design_scores_gemma":[0.00075420795,0.00020067782,0.000117300784,0.46659228,0.003490538,0.0001542128,0.0000046542887,2.3210204e-7,0.0000035225669,0.000016698634,0.5283101,0.0003555872],"about_ca_topic_score_codex":0.000049809052,"about_ca_topic_score_gemma":0.0000014053624,"teacher_disagreement_score":0.5281991,"about_ca_system_score_codex":0.000033411125,"about_ca_system_score_gemma":0.00010029546,"threshold_uncertainty_score":0.95941246},"labels":[],"label_agreement":null},{"id":"W2975094520","doi":"10.1016/j.vaccine.2019.09.064","title":"A nested case-control study measuring pertussis vaccine effectiveness and duration of protection in Manitoba, Canada, 1992–2015: A Canadian Immunization Research Network Study","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary; Public Health Ontario; University of Toronto; University of Manitoba","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Medicine; Outbreak; Immunization; Vaccination; Pertussis vaccine; Population; Whooping cough; Vaccine efficacy; Pediatrics; Demography; Environmental health; Immunology; Virology; Antibody","score_opus":0.02606559366921139,"score_gpt":0.2575207724582707,"score_spread":0.23145517878905933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2975094520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99461925,0.00036786738,0.000016721959,0.00013211818,0.000503966,0.004306031,0.000017319377,0.000021145688,0.000015565218],"genre_scores_gemma":[0.99967945,0.000008003549,0.0000023278074,0.000006098584,0.00006034782,0.0001695715,0.000017236258,0.00002264782,0.000034300076],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970114,0.0016963446,0.00046252005,0.00035438998,0.000048304126,0.00042701742],"domain_scores_gemma":[0.99894077,0.00023946454,0.00012522713,0.00033230832,0.00032016632,0.00004205397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020707024,0.00018481881,0.00043253996,0.0004761759,0.00037739717,0.000028174903,0.0000982242,0.00014190644,0.000121457684],"category_scores_gemma":[0.00017161247,0.00016502716,0.0000225949,0.0008640729,0.000004881815,0.0001592036,0.000056589404,0.00036020885,0.000007879302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008017795,0.00030387405,0.9516742,0.000045467208,0.0002058484,0.00003285146,0.0004897199,0.0003348996,0.04393648,0.000009027718,0.000053289776,0.0021125118],"study_design_scores_gemma":[0.006568322,0.001242646,0.9875709,0.000068715024,0.00006015282,0.00021294218,0.003030638,0.00013701772,0.0008197263,0.000006056716,0.00012902328,0.00015386908],"about_ca_topic_score_codex":0.99177337,"about_ca_topic_score_gemma":0.9990368,"teacher_disagreement_score":0.043116756,"about_ca_system_score_codex":0.0003702994,"about_ca_system_score_gemma":0.0003009139,"threshold_uncertainty_score":0.67296124},"labels":[],"label_agreement":null},{"id":"W2976461587","doi":"10.1128/jcm.01254-19","title":"Identification and Characterization of “ <i>Haemophilus quentini</i> ” Strains Causing Invasive Disease in Ontario, Canada (2016 to 2018)","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Public Health Ontario; University of Toronto","funders":"Wellcome Trust","keywords":"Haemophilus influenzae; Pasteurellaceae; Pathogen; Biology; Microbiology; Haemophilus; Human pathogen; Genitourinary system; Human disease; Disease; Bacteria; Medicine; Pathology; Antibiotics; Genetics","score_opus":0.02323614956710509,"score_gpt":0.2810333797176167,"score_spread":0.25779723015051165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2976461587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953983,0.00009225709,0.000026864265,0.0006790072,0.0035267673,0.00018661175,0.00007310033,0.0000023550515,0.0000147345645],"genre_scores_gemma":[0.99892735,0.00009716147,0.000017068129,0.00024408025,0.00006513309,0.0000012748436,0.00006991926,0.0000068946983,0.0005711298],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99807197,0.00025789012,0.0013138182,0.00017946809,0.000010161907,0.00016668376],"domain_scores_gemma":[0.99855244,0.00021563728,0.0008360478,0.00014615816,0.0001956333,0.000054065807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005672862,0.00010754271,0.0005203616,0.00013315292,0.000030141211,0.000008346799,0.000100655336,0.00018045104,0.00031895383],"category_scores_gemma":[0.0002638612,0.000089205896,0.000082799896,0.00008252629,0.00006744531,0.00010721,0.00005594594,0.00031318172,0.000015235396],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002955666,0.00009087112,0.198168,0.000012918532,0.000056373065,0.0000027396634,0.000056412537,0.000004080059,0.80041236,0.000025499785,0.00043120692,0.00044398184],"study_design_scores_gemma":[0.0014391821,0.00029672027,0.9580174,0.00013114861,0.00004412637,0.00010197019,0.000027969263,3.6984835e-7,0.018998824,0.00003345979,0.020797808,0.000111003945],"about_ca_topic_score_codex":0.1382224,"about_ca_topic_score_gemma":0.59346825,"teacher_disagreement_score":0.7814135,"about_ca_system_score_codex":0.00007466262,"about_ca_system_score_gemma":0.0010910593,"threshold_uncertainty_score":0.8675163},"labels":[],"label_agreement":null},{"id":"W2978672155","doi":"10.1016/j.vaccine.2019.09.070","title":"The health and economic burden of pertussis in Canada: A microsimulation study","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"Canadian Immunization Research Network","keywords":"Microsimulation; Whooping cough; Environmental health; Medicine; Virology; Vaccination; Transport engineering; Engineering","score_opus":0.007842683502016631,"score_gpt":0.23329470662038862,"score_spread":0.22545202311837198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978672155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974458,0.0011779923,2.6737032e-7,0.0007054593,0.00039443522,0.00024560376,0.000006516447,0.0000033624494,0.000020522199],"genre_scores_gemma":[0.9995805,0.0001088719,0.0000011674573,0.000019697245,0.000012716628,0.0000026978412,0.0000069264524,0.000003463342,0.0002639739],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995587,0.00006131499,0.00018756244,0.00008995898,0.0000035208986,0.00009896813],"domain_scores_gemma":[0.9997203,0.0000785701,0.00006866601,0.00011424562,0.000010569282,0.00000769182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112519614,0.00004948524,0.00014469627,0.000031141702,0.000056974455,0.0000043369673,0.00004254902,0.000021451557,0.000116068615],"category_scores_gemma":[0.0000073701012,0.00003288868,0.00000953576,0.00003465401,0.0000022337865,0.000024186851,0.000026861406,0.0000506249,0.000012731191],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016473577,0.000029987552,0.9698723,0.000008102649,0.000043222448,6.170501e-8,0.00051708537,0.000069917536,0.023657834,0.000060097846,0.0007222855,0.004854354],"study_design_scores_gemma":[0.002228692,0.00038217183,0.97339153,0.000011788957,0.000005509965,0.000006056725,0.0021135972,0.000075128446,0.0008171164,0.000009375937,0.020896453,0.000062603925],"about_ca_topic_score_codex":0.9051004,"about_ca_topic_score_gemma":0.9041184,"teacher_disagreement_score":0.022840718,"about_ca_system_score_codex":0.00009242921,"about_ca_system_score_gemma":0.00024089667,"threshold_uncertainty_score":0.13411614},"labels":[],"label_agreement":null},{"id":"W2979036623","doi":"10.1016/j.xphs.2019.10.001","title":"Development of a Pertactin-Coated Beads Approach for Screening of Functional Monoclonal Antibodies","year":2019,"lang":"en","type":"article","venue":"Journal of Pharmaceutical Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Monoclonal antibody; Pertactin; Potency; Antigen; Bordetella pertussis; In vitro; Antibody; In vitro toxicology; Virology; Biology; Microbiology; Chemistry; Immunology; Bacteria; Biochemistry; Pertussis toxin","score_opus":0.10646225473622438,"score_gpt":0.35778699472340264,"score_spread":0.25132473998717825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979036623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925952,0.0004560949,0.0057083433,0.00008012077,0.0006303457,0.000098607954,0.0000061289506,0.0000034974732,0.00042163534],"genre_scores_gemma":[0.9857612,0.000019075553,0.0140507035,0.000015329862,0.000044299843,0.0000015929937,0.000004201163,0.000002683007,0.00010089514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991747,0.00004609937,0.0004647028,0.00009977724,0.00005325713,0.0001614495],"domain_scores_gemma":[0.999218,0.00017069113,0.0003211038,0.000034103774,0.00023275506,0.000023330515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081769924,0.00007630253,0.00025228586,0.0001314645,0.00012967442,0.00000905046,0.00014180988,0.00006392606,0.0004550014],"category_scores_gemma":[0.00005899743,0.00005039304,0.00011017036,0.0001629629,0.00018450367,0.00015174715,0.0000359567,0.00012476751,0.0000030028366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035813867,0.00017440988,0.019319946,0.000033053366,0.00014414186,5.3569778e-8,0.00012639337,0.00009181887,0.9730295,0.0005019504,0.000133307,0.0060872883],"study_design_scores_gemma":[0.0018812885,0.00048052464,0.02937356,0.00006285913,0.000073534284,0.00011026123,0.0007843167,0.0006671802,0.9492244,0.000024750443,0.017197035,0.000120261735],"about_ca_topic_score_codex":0.000005829093,"about_ca_topic_score_gemma":8.0812447e-7,"teacher_disagreement_score":0.023805069,"about_ca_system_score_codex":0.000014552904,"about_ca_system_score_gemma":0.00014392033,"threshold_uncertainty_score":0.49819463},"labels":[],"label_agreement":null},{"id":"W2979551548","doi":"10.3389/fimmu.2019.02423","title":"The Effect of Timing of Tetanus-Diphtheria-Acellular Pertussis Vaccine Administration in Pregnancy on the Avidity of Pertussis Antibodies","year":2019,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Monash University; Thrasher Research Fund","keywords":"Avidity; Medicine; Diphtheria; Tetanus; Vaccination; Antibody; Pregnancy; Pertussis vaccine; Pertussis toxin; Immunology; Gestational age; Obstetrics; Internal medicine; Immunization; Biology","score_opus":0.009401175267719457,"score_gpt":0.2325307393170869,"score_spread":0.22312956404936743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979551548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98744196,0.009234569,0.000029905803,0.00031327174,0.0020624225,0.00049738964,0.000016814485,0.000009013131,0.00039462873],"genre_scores_gemma":[0.998467,0.0010596758,0.000036473633,0.0000042426623,0.0000088683555,0.00003435369,0.000018910487,0.00001181323,0.00035866015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982447,0.0007121314,0.00057316164,0.00020340824,0.000023293529,0.00024327711],"domain_scores_gemma":[0.99848807,0.0006174104,0.00036175188,0.00047698652,0.00005110811,0.0000046714695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005037145,0.00017701078,0.0005975118,0.00017879336,0.000083770734,0.0000047890912,0.00029566753,0.00026539687,0.00019957659],"category_scores_gemma":[0.0002653678,0.00010005461,0.00012683828,0.00023127213,0.00022102086,0.000060493327,0.0000715658,0.000272564,0.000008952302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016143336,0.00014222636,0.25839707,0.00007089246,0.00030159767,6.2280037e-7,0.0003853083,0.000008227621,0.73021555,0.00042018676,0.00035758835,0.008086387],"study_design_scores_gemma":[0.0021840644,0.0024826943,0.20919295,0.00037725797,0.000058004,0.000012453752,0.0008008646,0.000029304529,0.78209186,0.0001237254,0.002502177,0.00014464272],"about_ca_topic_score_codex":0.00023130704,"about_ca_topic_score_gemma":0.000069602305,"teacher_disagreement_score":0.05187632,"about_ca_system_score_codex":0.00003542274,"about_ca_system_score_gemma":0.000050193907,"threshold_uncertainty_score":0.40801087},"labels":[],"label_agreement":null},{"id":"W2981674121","doi":"10.1093/ofid/ofz359.041","title":"856. Invasive Haemophilus influenzae Disease in Children: A Canadian MultiCenter Study on Emerging Serotypes","year":2019,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; Children's Hospital of Eastern Ontario; McMaster University; London Health Sciences Centre; McMaster Children's Hospital; Kingston Health Sciences Centre; Children's Hospital of Winnipeg; Stollery Children's Hospital; Izaak Walton Killam Health Centre; University of Manitoba; Montreal Children's Hospital; Western University","funders":"","keywords":"Medicine; Bacteremia; Meningitis; Internal medicine; Pneumonia; Septic arthritis; Epiglottitis; Cellulitis; Serotype; Pediatrics; Gastroenterology; Surgery; Immunology; Arthritis; Microbiology; Antibiotics","score_opus":0.009234542957648327,"score_gpt":0.2585915794351998,"score_spread":0.24935703647755145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981674121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932956,0.00022775201,2.706739e-7,0.00028568125,0.0010064624,0.0027510638,0.00023944768,0.00007600095,0.002117718],"genre_scores_gemma":[0.99815893,0.000016746637,6.062882e-7,0.0008098318,0.00003588969,0.00027935422,0.00021114135,0.000038227674,0.00044929722],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832076,0.00022009629,0.00032033058,0.0005300194,0.00002922904,0.0005795726],"domain_scores_gemma":[0.9990648,0.00007668249,0.00010728758,0.0005115456,0.000070176975,0.00016948304],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009385051,0.0003050861,0.0003733595,0.0004130372,0.0003668427,0.00017064878,0.0003700997,0.00011079245,0.0019243781],"category_scores_gemma":[0.00012963377,0.00027839697,0.00010949361,0.00029422788,0.00004138838,0.00042730544,0.00026492696,0.0002407863,0.002077398],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003060691,0.0011778362,0.99570113,0.000008608656,0.00022624734,0.000008149197,0.00018548482,0.00015657913,0.000482746,0.00023157163,0.00102373,0.000491844],"study_design_scores_gemma":[0.0043198345,0.00052871084,0.9912368,0.000078110876,0.00008215437,0.000006592214,0.00038139857,0.000002926882,0.00015729242,0.00013580974,0.0027181346,0.00035220827],"about_ca_topic_score_codex":0.13778186,"about_ca_topic_score_gemma":0.15100685,"teacher_disagreement_score":0.013224976,"about_ca_system_score_codex":0.00018117437,"about_ca_system_score_gemma":0.00030079728,"threshold_uncertainty_score":0.9999668},"labels":[],"label_agreement":null},{"id":"W2981913332","doi":"","title":"Comparative efficacy of intranasal and injectable vaccines in stimulating <i>Bordetella bronchiseptica</i>-reactive anamnestic antibody responses in household dogs.","year":2017,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Bordetella bronchiseptica; Medicine; Nasal administration; Antibody; Immunology; Biology","score_opus":0.04138294705334074,"score_gpt":0.3006256221548633,"score_spread":0.2592426751015226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981913332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99799466,0.00047719927,0.0000066016996,0.00008988224,0.00031508278,0.00056968705,0.000025346735,0.00002340792,0.0004981419],"genre_scores_gemma":[0.9996634,0.00005876919,0.00002357969,0.000008112206,0.00002974508,0.00009025128,0.000013976262,0.0000117602785,0.00010040237],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988675,0.0001500332,0.00035618545,0.00027001172,0.00001536179,0.00034088688],"domain_scores_gemma":[0.9989223,0.0005266956,0.00020067634,0.0002831997,0.000042151267,0.000024980984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003407709,0.00016662378,0.00048446166,0.00023681906,0.00017117719,0.000042800333,0.00015686617,0.00014514486,0.000017389557],"category_scores_gemma":[0.000465043,0.00014909444,0.000035671328,0.00012927369,0.00015981996,0.00023516182,0.000104144274,0.00022918258,0.0000022847992],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014628205,0.00033458814,0.76994884,0.000027091946,0.0000806393,0.0000040838195,0.00066729495,0.00010731455,0.21905503,0.0001304227,0.00003600987,0.008145863],"study_design_scores_gemma":[0.003203069,0.00009259296,0.9776314,0.00004236256,0.000025934742,0.000014458965,0.00008972842,0.00001827703,0.018501626,0.00005259204,0.00017755084,0.00015044474],"about_ca_topic_score_codex":0.0027188847,"about_ca_topic_score_gemma":0.0014475747,"teacher_disagreement_score":0.20768252,"about_ca_system_score_codex":0.000029640949,"about_ca_system_score_gemma":0.000029200179,"threshold_uncertainty_score":0.6079895},"labels":[],"label_agreement":null},{"id":"W2982349961","doi":"10.1139/cjm-2019-0406","title":"Whole genome sequencing to study the phylogenetic structure of serotype a <i>Haemophilus influenzae</i> recovered from patients in Canada","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Government of Nunavut; Government of Northwest Territories; Yukon Health and Social Services; Government of New Brunswick; NOSM University; Public Health Ontario; Newfoundland and Labrador Centre for Applied Health Research; Dalhousie University; St. John’s Health Sciences Centre; University of Toronto; Provincial Laboratory of Public Health; Memorial University of Newfoundland; BC Mental Health & Substance Use Services; Government of Prince Edward Island; Institut National de Santé Publique du Québec; University of Manitoba; Nova Scotia Health Authority; Public Health Agency of Canada","funders":"University of Oxford; Government of Canada; Wellcome Trust","keywords":"Multilocus sequence typing; Phylogenetic tree; Biology; Phylogenetics; Genetics; Haemophilus influenzae; Population; Whole genome sequencing; Genome; Serotype; Typing; Genotype; Gene; Microbiology; Bacteria","score_opus":0.009368540560957499,"score_gpt":0.19512836815454807,"score_spread":0.18575982759359055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982349961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99587876,0.00054993364,5.8058293e-7,0.00012565768,0.001781144,0.00036138782,0.0012896573,0.0000010837698,0.000011771393],"genre_scores_gemma":[0.99945223,0.0000041322937,0.000014889534,0.00036784058,0.000037002643,0.0000012294266,0.000087054555,0.000011347916,0.000024291101],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987444,0.0002602867,0.0005166228,0.00015901275,0.000010411093,0.000309219],"domain_scores_gemma":[0.99915266,0.00007664206,0.00027724457,0.00023274752,0.00019318078,0.00006750359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010967845,0.00014481437,0.00039816104,0.00018285401,0.00006943119,0.000007936797,0.0003568341,0.00013104218,0.00074459496],"category_scores_gemma":[0.000053039264,0.000106249034,0.00004802025,0.00019771533,0.000037344653,0.000034977864,0.00003464248,0.00030958923,0.0000267516],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055831966,0.000010747308,0.31771865,0.0000018277633,0.00011484366,0.000003624384,0.0005089384,0.00020628837,0.68095845,9.558094e-7,0.00022640095,0.0001934053],"study_design_scores_gemma":[0.0030580119,0.0010719727,0.9203471,0.000047043046,0.00006700528,0.00017025869,0.0014973306,2.5707965e-7,0.041087035,0.000059463684,0.03233698,0.00025756913],"about_ca_topic_score_codex":0.9117919,"about_ca_topic_score_gemma":0.9926616,"teacher_disagreement_score":0.6398714,"about_ca_system_score_codex":0.00047411825,"about_ca_system_score_gemma":0.0024078118,"threshold_uncertainty_score":0.8152793},"labels":[],"label_agreement":null},{"id":"W2982576442","doi":"10.1038/s41598-019-51925-z","title":"Potential usefulness of C-reactive protein and procalcitonin determination in patients admitted for neurological disorders in rural Democratic Republic of Congo","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; European Commission; Instituut voor Tropische Geneeskunde","keywords":"Procalcitonin; Medicine; Etiology; C-reactive protein; Internal medicine; Pneumonia; Antibiotics; Gastroenterology; Cerebrospinal fluid; Sepsis; Microbiology; Inflammation; Biology","score_opus":0.006818685637739039,"score_gpt":0.22314359606514247,"score_spread":0.21632491042740343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982576442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997055,0.000012656791,0.000029848481,0.000031196254,0.0015182091,0.0013213557,0.00000457637,0.00000835681,0.000018824869],"genre_scores_gemma":[0.99961615,2.3840313e-7,0.000029778777,0.0000015260733,0.0000030832568,0.000087976085,0.00007322179,0.0000048960196,0.00018314793],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989355,0.000100247205,0.00048120643,0.00029602466,0.000027633334,0.00015938577],"domain_scores_gemma":[0.9992926,0.00003524854,0.0003395439,0.00018317874,0.00013916747,0.000010257187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046286377,0.00008514135,0.00023116227,0.0002361723,0.000047711954,0.000015703496,0.00004904698,0.00012732847,0.000037792957],"category_scores_gemma":[0.00027337632,0.0000704925,0.000040444804,0.00024308168,0.00014012294,0.00016932828,0.00004192138,0.00008201045,7.7643654e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019018595,0.00031046764,0.53192866,0.00004490193,0.000007738159,5.5854855e-7,0.00013155428,0.0000047362714,0.46446326,0.000028398314,0.00001306274,0.0028764908],"study_design_scores_gemma":[0.0013140661,0.0005140811,0.919908,0.00003926007,0.0000087004055,0.000014199296,0.00007258105,0.000111292116,0.07633121,0.0015111682,0.000086049746,0.00008939177],"about_ca_topic_score_codex":0.000064519234,"about_ca_topic_score_gemma":0.00007785278,"teacher_disagreement_score":0.38813204,"about_ca_system_score_codex":0.000010930907,"about_ca_system_score_gemma":0.00004489161,"threshold_uncertainty_score":0.28746006},"labels":[],"label_agreement":null},{"id":"W2983304941","doi":"10.1186/s12887-019-1820-0","title":"The prevalence and clinical characteristics of pertussis-associated pneumonia among infants in Botswana","year":2019,"lang":"en","type":"article","venue":"BMC Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; BC Children's Hospital; University of British Columbia; University of British Columbia Hospital","funders":"National Institute of Allergy and Infectious Diseases; Canadian Child Health Clinician Scientist Program; University of Pennsylvania; European Society for Paediatric Infectious Diseases; Center for AIDS Research, University of Washington; BC Children's Hospital; Michael Smith Health Research BC; ViiV Healthcare; National Institutes of Health; International AIDS Society; Children's Hospital Foundation; Thrasher Research Fund","keywords":"Medicine; Pneumonia; Bordetella pertussis; Pediatrics; Vaccination; Immunology; Internal medicine","score_opus":0.012636974927165796,"score_gpt":0.26337643954360745,"score_spread":0.25073946461644164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2983304941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99763185,0.0007892492,0.000001801849,0.000023559605,0.0012319413,0.00018007154,0.00003271923,0.00001613532,0.000092673356],"genre_scores_gemma":[0.99557203,0.0033667102,0.000006341904,0.000009027462,0.00005449306,0.000004588088,0.000011336481,0.000007428369,0.0009680169],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894977,0.00021839808,0.00045812572,0.00016651755,0.000016537278,0.00019064981],"domain_scores_gemma":[0.9987143,0.00075467105,0.00024632382,0.00020243772,0.00006682603,0.000015411253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005950795,0.00009349131,0.00023483695,0.00005791079,0.00007962803,0.000015710331,0.00012708176,0.00023600867,0.000049545408],"category_scores_gemma":[0.00066175807,0.00006567737,0.00005624735,0.00016244668,0.00009373797,0.0000646903,0.0000905178,0.00023309825,0.000033375418],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005182635,0.00007965238,0.9974228,0.00004084892,0.000014651056,1.3879874e-7,0.000039187755,1.0691263e-7,0.0014285676,0.00004013265,0.000092942464,0.0007891319],"study_design_scores_gemma":[0.00063264783,0.00011239031,0.9979921,0.000014683623,0.000045275607,0.0000021962703,0.00002124587,0.0000109941775,0.00003080314,0.000014612683,0.0010423244,0.0000807298],"about_ca_topic_score_codex":0.00011616143,"about_ca_topic_score_gemma":0.00022210041,"teacher_disagreement_score":0.0025774608,"about_ca_system_score_codex":0.000013717363,"about_ca_system_score_gemma":0.000060683833,"threshold_uncertainty_score":0.26782456},"labels":[],"label_agreement":null},{"id":"W2984353633","doi":"10.1016/j.vaccine.2019.10.063","title":"Impact of the adolescent pertussis booster dose on the incidence of pertussis in British Columbia and Quebec, Canada","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; BC Centre for Disease Control; University of British Columbia; Université de Montréal; Université Laval; Institut National de Santé Publique du Québec","funders":"","keywords":"Medicine; Booster dose; Incidence (geometry); Toxoid; Tetanus; Pediatrics; Diphtheria; Whooping cough; Booster (rocketry); Pertussis vaccine; Demography; Vaccination; Immunization; Immunology","score_opus":0.006042226236220567,"score_gpt":0.2073774260401746,"score_spread":0.20133519980395403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2984353633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99839747,0.0004249301,9.6397244e-8,0.0005560055,0.00029719903,0.00023651238,0.000040728835,0.000003445806,0.000043607044],"genre_scores_gemma":[0.99769825,0.00007053456,5.179859e-7,0.00013255597,0.000011441165,0.0000037665711,0.0000042270253,0.0000062095833,0.0020724903],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993902,0.00011141103,0.000213037,0.00012930814,0.000017473334,0.00013858688],"domain_scores_gemma":[0.99946684,0.000112640315,0.00010436629,0.00025732807,0.00004863733,0.000010196291],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009533246,0.000071550254,0.00021030754,0.000021020547,0.000058450365,0.000017472994,0.00013227857,0.0000727078,0.0016373827],"category_scores_gemma":[0.0000629492,0.000049759372,0.00006067589,0.00012979182,0.000016922359,0.000038016424,0.000079060264,0.00014154025,0.0000038320827],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005546504,0.00007863995,0.9064367,0.000015041087,0.000043335534,3.307711e-7,0.00006233541,0.0000028192442,0.08056115,0.0000036200945,0.011194048,0.0015465348],"study_design_scores_gemma":[0.0007127893,0.000098637625,0.99516,0.00015286276,0.000012545732,0.000020598616,0.00007004858,0.0000027109538,0.0021919785,0.000004959107,0.0015127213,0.00006015696],"about_ca_topic_score_codex":0.9805646,"about_ca_topic_score_gemma":0.99555457,"teacher_disagreement_score":0.08872332,"about_ca_system_score_codex":0.00006681537,"about_ca_system_score_gemma":0.00017184505,"threshold_uncertainty_score":0.99927527},"labels":[],"label_agreement":null},{"id":"W2984597285","doi":"10.1186/s12889-019-7847-1","title":"Antenatal visits are positively associated with uptake of tetanus toxoid and intermittent preventive treatment in pregnancy in Ivory Coast","year":2019,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"UNICEF","keywords":"Medicine; Tetanus; Sulfadoxine; Public health; Toxoid; Pregnancy; Malaria; Odds ratio; Sulfadoxine/pyrimethamine; Psychological intervention; Logistic regression; Environmental health; Pediatrics; Obstetrics; Vaccination; Pyrimethamine; Immunology; Internal medicine; Nursing; Chloroquine","score_opus":0.023046830273151766,"score_gpt":0.26603192368142875,"score_spread":0.24298509340827698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2984597285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972551,0.0013687909,0.00001370844,0.00025945657,0.00017579176,0.0006851636,0.000115117226,0.000018102375,0.00010876555],"genre_scores_gemma":[0.9990366,0.00014696579,0.000016724502,0.000028702594,0.000005269587,0.000039744722,0.00009124314,0.000009725623,0.0006249901],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987321,0.0003173561,0.00036063525,0.00024987114,0.000016236223,0.00032383116],"domain_scores_gemma":[0.9994568,0.000069895446,0.000247117,0.00012776583,0.00006545712,0.000032936383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002540843,0.0001408376,0.00040711972,0.00020619736,0.00004079012,0.00001229154,0.000058970196,0.00011358272,0.00005321507],"category_scores_gemma":[0.000051565217,0.0001049142,0.000034249057,0.00021140483,0.00003460915,0.00014932214,0.000042657117,0.00012531318,0.000007853082],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016180085,0.00102185,0.97734874,0.00007316404,0.00010084754,0.0000052299392,0.001358437,6.6358757e-7,0.005194177,0.00010636051,0.000025008017,0.014603709],"study_design_scores_gemma":[0.0035078744,0.0012554679,0.9926944,0.0007828357,0.000005290649,0.000038936516,0.0008945791,0.0000031185214,0.0004958191,0.0000049713235,0.0002225228,0.00009422106],"about_ca_topic_score_codex":0.0013977856,"about_ca_topic_score_gemma":0.014933443,"teacher_disagreement_score":0.01534561,"about_ca_system_score_codex":0.00022457915,"about_ca_system_score_gemma":0.0003143886,"threshold_uncertainty_score":0.83332115},"labels":[],"label_agreement":null},{"id":"W2989602053","doi":"10.1016/j.vaccine.2019.05.031","title":"Neonatal seizures: Case definition &amp; guidelines for data collection, analysis, and presentation of immunization safety data","year":2019,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children; Dalhousie University","funders":"","keywords":"Immunization; Presentation (obstetrics); Medicine; Data collection; Pediatrics; Medical emergency; Intensive care medicine; Immunology; Obstetrics; Antibody","score_opus":0.24371897398569017,"score_gpt":0.41895009824763035,"score_spread":0.17523112426194018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989602053","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021507422,0.9704966,0.01860705,0.000058722027,0.00086407847,0.0011835585,0.008525305,0.00003928591,0.000010328865],"genre_scores_gemma":[0.000041089457,0.7894254,0.0018830949,0.000007501018,0.00010633467,0.000020659812,0.20795415,0.00002632028,0.00053544063],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978333,0.00025657288,0.0011009094,0.0006247168,0.000019959427,0.0001645101],"domain_scores_gemma":[0.99639565,0.00046848736,0.0007518499,0.001819917,0.0005484272,0.000015684374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005923532,0.00029082297,0.00128336,0.0005358263,0.00023957819,0.000031822805,0.0004452837,0.0004172568,0.00027448282],"category_scores_gemma":[0.000769581,0.00023759378,0.00014030185,0.000930913,0.000014033145,0.0003324991,0.00056846807,0.00015699101,0.000023316976],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034983916,0.00017444174,0.00047474512,0.009468593,0.008721506,0.0000032062403,0.00006987953,0.000008854233,0.0002510051,0.00021799939,0.07246325,0.9077967],"study_design_scores_gemma":[0.0009461122,0.00006213751,0.00006495642,0.0005184402,0.009469931,0.0011364759,0.00002122231,0.00010344986,0.000010035049,0.000012622026,0.9874332,0.00022143326],"about_ca_topic_score_codex":0.0022529694,"about_ca_topic_score_gemma":0.003857987,"teacher_disagreement_score":0.9149699,"about_ca_system_score_codex":0.000026212054,"about_ca_system_score_gemma":0.00015934576,"threshold_uncertainty_score":0.9688793},"labels":[],"label_agreement":null},{"id":"W2990831842","doi":"10.1155/2019/8901847","title":"Epidemiology and Control of Meningococcal Disease in Canada: A Long, Complex, and Unfinished Story","year":2019,"lang":"en","type":"review","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval; Institut National de Santé Publique du Québec; Centre Hospitalier Universitaire de Sherbrooke","funders":"Université Laval; Sanofi; GlaxoSmithKline; Université de Sherbrooke; Pfizer","keywords":"Outbreak; Meningococcal disease; Conjugate vaccine; Meningococcal vaccine; Immunization; Epidemiology; Neisseria meningitidis; Vaccination; Medicine; Virology; Public health; Environmental health; Immunology; Biology; Antigen","score_opus":0.022072269000637294,"score_gpt":0.2724380460429052,"score_spread":0.2503657770422679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2990831842","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060504116,0.9367876,0.000018394694,0.00027555908,0.001257011,0.0003410134,0.0008026443,0.0000035035628,0.000010138571],"genre_scores_gemma":[0.31248888,0.687018,0.000001587811,0.00024807002,0.00008514756,0.000010531884,0.00011062153,0.000018639334,0.000018550954],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99686074,0.0011983442,0.0010809599,0.0003301431,0.000014613253,0.0005151698],"domain_scores_gemma":[0.9968386,0.0014498873,0.00072429626,0.0001580413,0.00010600716,0.000723131],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00056577,0.00035976272,0.0026725323,0.00046834236,0.00011556426,0.0000061378446,0.00016354432,0.0005426223,0.000526632],"category_scores_gemma":[0.0014108919,0.00027434435,0.00020137396,0.00011126455,0.0007595028,0.00004124186,0.000053704276,0.000802202,0.0000024798483],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023106416,0.00013368735,0.51980144,0.007555116,0.0018787454,0.00030997602,0.00006948321,0.0000021249118,0.0001346394,0.00065539754,0.0037596363,0.46546867],"study_design_scores_gemma":[0.0032474746,0.00048932835,0.08487945,0.0034460633,0.0014658817,0.004366825,0.000032599975,0.0000018836175,4.137959e-7,0.000053223175,0.90160817,0.00040867375],"about_ca_topic_score_codex":0.4250179,"about_ca_topic_score_gemma":0.74511176,"teacher_disagreement_score":0.89784855,"about_ca_system_score_codex":0.00028295597,"about_ca_system_score_gemma":0.010122789,"threshold_uncertainty_score":0.99997085},"labels":[],"label_agreement":null},{"id":"W2991330128","doi":"10.1007/s10198-019-01129-z","title":"Economic evaluation of meningococcal vaccines: considerations for the future","year":2019,"lang":"en","type":"article","venue":"The European Journal of Health Economics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universitetet i Oslo; Sanofi Pasteur; Meningitis Research Foundation; University of Bristol; Department of Health and Social Care; National Institute for Health and Care Research; University of Toronto; Sanofi; World Health Organization; AstraZeneca; Bill and Melinda Gates Foundation; Pfizer","keywords":"Medicine; Economic evaluation; Meningococcal vaccine; Cost–benefit analysis; Risk analysis (engineering); Cost effectiveness; Transparency (behavior); Meningococcal disease; Intensive care medicine; Actuarial science; Computer science; Neisseria meningitidis; Immunology; Economics; Immunization","score_opus":0.04418162281234062,"score_gpt":0.29574941323725695,"score_spread":0.25156779042491634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991330128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9828919,0.0032751989,0.00012424232,0.0082196705,0.0045517054,0.0004788744,0.0000255006,0.0000041345534,0.00042877495],"genre_scores_gemma":[0.9985214,0.00059559284,0.00007015381,0.00020337991,0.00052455306,0.0000032488465,0.000005030993,0.000013197225,0.00006343178],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982674,0.000825571,0.00070432643,0.00007314316,0.0000074963928,0.00012204291],"domain_scores_gemma":[0.99826235,0.00047813263,0.00088740536,0.00020358116,0.0001565271,0.000012024757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005764344,0.000077292905,0.0002326232,0.000048452326,0.00023507333,0.00001875385,0.00015772184,0.000025107542,0.00046136617],"category_scores_gemma":[0.000049778195,0.000044130196,0.0001123626,0.000016478145,0.000029485647,0.00008571879,0.00002439233,0.00014784992,0.000080211554],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021487537,0.00056446315,0.013354558,0.0002707761,0.004700521,4.71084e-7,0.01188038,0.08902161,0.046556532,0.07762021,0.18352608,0.57035565],"study_design_scores_gemma":[0.016126687,0.002759444,0.13417904,0.00011306776,0.0006539189,0.0010922608,0.0056475727,0.001803573,0.003604624,0.0066061793,0.8269896,0.0004240655],"about_ca_topic_score_codex":0.000014188385,"about_ca_topic_score_gemma":0.000049491246,"teacher_disagreement_score":0.6434635,"about_ca_system_score_codex":0.000068159134,"about_ca_system_score_gemma":0.000334519,"threshold_uncertainty_score":0.5051636},"labels":[],"label_agreement":null},{"id":"W2991496612","doi":"10.1016/j.vaccine.2019.10.104","title":"Impact of tetanus-diphtheria-acellular pertussis immunization during pregnancy on subsequent infant immunization seroresponses: follow-up from a large randomized placebo-controlled trial","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary; Dalhousie University; Canadian Institute for Advanced Research","funders":"Dalhousie University; GlaxoSmithKline","keywords":"Tetanus; Diphtheria; Medicine; Immunization; Placebo; Pregnancy; Pediatrics; Randomized controlled trial; Whooping cough; Vaccination; Obstetrics; Immunology; Surgery; Antibody; Alternative medicine","score_opus":0.008340392639979915,"score_gpt":0.24383806376900025,"score_spread":0.23549767112902034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991496612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99116606,0.0017735179,0.00014066804,0.000048759233,0.0022888656,0.0042349556,0.00012340162,0.000112336136,0.00011141225],"genre_scores_gemma":[0.99589914,0.00045607137,0.000018061755,0.000007243461,0.00008555633,0.00019088741,0.0007665961,0.000055358698,0.0025210995],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9968274,0.0012990176,0.0010250016,0.000399849,0.00005182236,0.00039686848],"domain_scores_gemma":[0.9976804,0.00063193607,0.0006756603,0.0007560203,0.00022311497,0.000032831078],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000520375,0.00040637725,0.0015904929,0.00033572825,0.00020749817,0.00003866829,0.00024527987,0.0003730721,0.0061148703],"category_scores_gemma":[0.00061954395,0.00028366232,0.00070691603,0.00034525918,0.000017156866,0.0002173239,0.000099124096,0.00025032455,0.0002042771],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.5300937,0.00032021498,0.0036100154,0.000012310923,0.0009737522,7.765445e-7,0.0003224805,0.000054250082,0.46445924,0.000054026274,0.000018839288,0.00008037172],"study_design_scores_gemma":[0.920615,0.0010642351,0.018446377,0.00026165711,0.00033060912,0.000009806793,0.00007676952,0.00013463662,0.05859492,0.000029142931,0.00013372688,0.00030312815],"about_ca_topic_score_codex":0.0010915038,"about_ca_topic_score_gemma":0.000041722917,"teacher_disagreement_score":0.40586433,"about_ca_system_score_codex":0.000119295655,"about_ca_system_score_gemma":0.00011810582,"threshold_uncertainty_score":0.99996156},"labels":[],"label_agreement":null},{"id":"W2991620753","doi":"10.1016/j.vaccine.2019.10.105","title":"Immunogenicity, transplacental transfer of pertussis antibodies and safety following pertussis immunization during pregnancy: Evidence from a randomized, placebo-controlled trial","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Dalhousie University; Canadian Institute for Advanced Research","funders":"Dalhousie University; GlaxoSmithKline","keywords":"Medicine; Reactogenicity; Diphtheria; Pertactin; Pregnancy; Tetanus; Whooping cough; Randomized controlled trial; Vaccination; Obstetrics; Immunology; Immunization; Internal medicine; Pertussis toxin; Antibody; Biology","score_opus":0.00818752387204651,"score_gpt":0.22906416334097124,"score_spread":0.22087663946892472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991620753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759137,0.019006131,0.00021458886,0.0001960247,0.0017512034,0.0027305158,0.000046695568,0.00006659021,0.00007457237],"genre_scores_gemma":[0.99362457,0.005456793,0.000041978867,0.0000067169117,0.000061737366,0.00007343647,0.00008803399,0.000028014452,0.00061873137],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99789506,0.0005612006,0.0008405316,0.0003800714,0.000039824707,0.00028328627],"domain_scores_gemma":[0.99851304,0.0009192848,0.00015114967,0.00032528475,0.00006816041,0.000023101858],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035741774,0.0003052225,0.0014816205,0.00016584044,0.00024010478,0.000029157203,0.00016686707,0.00026281178,0.0013080271],"category_scores_gemma":[0.00017629664,0.0002249485,0.00054927066,0.00015963524,0.000031405438,0.00036368865,0.00005812714,0.00019773934,0.000027165088],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.52311665,0.000096779,0.004682886,0.00004133031,0.0009773114,4.6652698e-7,0.00071184617,0.000005440665,0.470052,0.000022879074,0.0000032669554,0.00028910395],"study_design_scores_gemma":[0.9104336,0.00027226674,0.010648015,0.00093922147,0.0008620417,0.000018758992,0.0001572284,0.000046282665,0.076284,0.000013524686,0.00005736278,0.00026768935],"about_ca_topic_score_codex":0.0010494365,"about_ca_topic_score_gemma":0.00008036553,"teacher_disagreement_score":0.393768,"about_ca_system_score_codex":0.000032259224,"about_ca_system_score_gemma":0.000049774346,"threshold_uncertainty_score":0.99960494},"labels":[],"label_agreement":null},{"id":"W2995566116","doi":"10.3390/antibiotics9010002","title":"Reduced Production of Bacterial Membrane Vesicles Predicts Mortality in ST45/USA600 Methicillin-Resistant Staphylococcus aureus Bacteremia","year":2019,"lang":"en","type":"article","venue":"Antibiotics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Mount Sinai Hospital","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Bacteremia; Microbiology; Staphylococcus aureus; Medicine; Methicillin-resistant Staphylococcus aureus; Bacteria; Biology; Antibiotics","score_opus":0.02077652936626862,"score_gpt":0.26546230117171027,"score_spread":0.24468577180544165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995566116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99383295,0.0001611202,0.0000037511616,0.00012537441,0.0049442328,0.00049526314,0.00008705284,0.00005825641,0.00029200595],"genre_scores_gemma":[0.9988631,0.00016071058,0.00007652102,0.000012456948,0.00019799928,8.70614e-7,0.00020083395,0.000022335735,0.0004651839],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998365,0.00025106707,0.00060820126,0.00040217623,0.00004014509,0.00033345152],"domain_scores_gemma":[0.9989571,0.00007808155,0.0002643118,0.0005215079,0.00015524874,0.000023757448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048788456,0.00022078998,0.00049252564,0.00017820309,0.000068083384,0.000019230807,0.00017584238,0.00039287994,0.0006807018],"category_scores_gemma":[0.00012683749,0.00019643987,0.00010036838,0.00025722652,0.00012350571,0.00016509027,0.000072328345,0.00031282855,0.00012152836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003676874,0.00022187922,0.03612147,0.00012759837,0.00015876946,9.563589e-7,0.00021744882,0.000023303002,0.9617682,0.00033650568,0.00023682663,0.0004193705],"study_design_scores_gemma":[0.0008239472,0.00020598169,0.24985218,0.000084056526,0.000055546603,0.000001931725,0.00009245846,0.0000026020616,0.7458532,0.000043374763,0.0028227626,0.00016199301],"about_ca_topic_score_codex":0.00053481216,"about_ca_topic_score_gemma":0.00034869625,"teacher_disagreement_score":0.21591501,"about_ca_system_score_codex":0.000042671454,"about_ca_system_score_gemma":0.000108839355,"threshold_uncertainty_score":0.80105853},"labels":[],"label_agreement":null},{"id":"W2997414608","doi":"10.1002/9780470473283.ch2","title":"Preparation of Glycoconjugate Vaccines","year":2008,"lang":"en","type":"other","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Glycoconjugate; Computational biology; Biology; Chemistry; Bioinformatics","score_opus":0.012034981930612242,"score_gpt":0.2712917588246742,"score_spread":0.25925677689406196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997414608","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0073939753,0.0018073763,0.000046083533,0.00002540319,0.0018293625,0.0002613003,0.000047169528,0.00022676963,0.98836255],"genre_scores_gemma":[0.015444241,0.0008816981,0.000051104707,0.000010204071,0.000115118986,0.000013334557,0.00017216345,0.00008923074,0.9832229],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995545,0.000033807555,0.00017384323,0.00013963782,0.00000448651,0.000093692375],"domain_scores_gemma":[0.999602,0.000012853299,0.00015440457,0.00019825001,0.000027519261,0.0000049392133],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000020590798,0.0001276744,0.0002589821,0.00013618225,0.000026289592,0.000002232327,0.00006624411,0.000365454,0.030471222],"category_scores_gemma":[0.000008369196,0.00009855848,0.00006638783,0.000055437733,0.000029482593,0.000018482613,0.000023363442,0.00006567557,0.0009355294],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031133295,0.0000450373,0.00015467174,0.000019270392,0.00013772934,1.0846748e-7,0.000015274392,8.6476334e-8,0.09637643,0.00040765823,0.90240043,0.0004121532],"study_design_scores_gemma":[0.00038151705,0.00009053557,0.0002107157,0.000030025965,0.000024650726,0.000031364263,0.000003835911,1.1097286e-7,0.029833345,0.000010720387,0.9692796,0.00010356737],"about_ca_topic_score_codex":0.0008478914,"about_ca_topic_score_gemma":0.00031439107,"teacher_disagreement_score":0.06687916,"about_ca_system_score_codex":0.0000040577365,"about_ca_system_score_gemma":0.00002264864,"threshold_uncertainty_score":0.99984235},"labels":[],"label_agreement":null},{"id":"W2997630322","doi":"10.36552/pjns.v23i4.387","title":"Consequences of Streptococcal Pneumoniae Meningitis When it Remains Undiagnosed – Suggested Model of Investigational Process","year":2019,"lang":"en","type":"article","venue":"Pakistan Journal Of Neurological Surgery","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Defence Medical Centre","funders":"","keywords":"Meningitis; Medicine; Streptococcus pneumoniae; Bacterial meningitis; Lumbar puncture; Culprit; Rash; Pediatrics; Dermatology; Internal medicine; Biology; Microbiology; Antibiotics","score_opus":0.037503338149958126,"score_gpt":0.27945626400383183,"score_spread":0.2419529258538737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997630322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99806327,0.00016212728,0.0000465386,0.00092163484,0.0004813713,0.00013058777,0.000065895474,0.000012309232,0.000116291165],"genre_scores_gemma":[0.9996569,0.000063368374,0.000065158245,0.000095535936,0.00003057443,0.000004141349,0.000015381645,0.000008696169,0.000060232094],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981824,0.0003239228,0.0010405817,0.00017234021,0.00006529364,0.00021542415],"domain_scores_gemma":[0.99701333,0.001367222,0.0009958731,0.00013203495,0.00044303873,0.000048519403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005818053,0.00015256487,0.00064709067,0.00017620789,0.000050856794,0.000011440647,0.00018089214,0.00020151831,0.0008107549],"category_scores_gemma":[0.00055424223,0.000111977955,0.00023313542,0.00015613748,0.0003762863,0.00014742008,0.00003402753,0.00031755873,0.000008408132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035128728,0.00017241687,0.3344304,0.0000409639,0.00008718384,0.000009439937,0.000080877464,0.0006179003,0.66311485,0.000543591,0.00041688644,0.0001342119],"study_design_scores_gemma":[0.0040547317,0.0058726934,0.44285154,0.00071233243,0.00032552355,0.002133546,0.00049977493,0.00039230438,0.5152316,0.023735119,0.0032613112,0.00092951744],"about_ca_topic_score_codex":0.000013668298,"about_ca_topic_score_gemma":0.0000059195563,"teacher_disagreement_score":0.14788327,"about_ca_system_score_codex":0.000011089614,"about_ca_system_score_gemma":0.00025298097,"threshold_uncertainty_score":0.88771975},"labels":[],"label_agreement":null},{"id":"W2998117186","doi":"10.1016/j.vaccine.2019.12.021","title":"Assessing adolescent immunization options for pertussis in Canada: A cost-utility analysis","year":2019,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Ottawa; Children's Hospital of Eastern Ontario; University Health Network; Toronto General Hospital; University of Toronto","funders":"","keywords":"Medicine; Immunization; Vaccination; Pediatrics; Cost effectiveness; Pertussis vaccine; Diphtheria; Quality-adjusted life year; Cost-effectiveness analysis; Tetanus; Immunology","score_opus":0.01991886768611306,"score_gpt":0.2692983553266036,"score_spread":0.24937948764049056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998117186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965536,0.00035867997,0.0015474998,0.00039103188,0.0006018544,0.00040095308,0.000038697657,0.000020901442,0.00008679412],"genre_scores_gemma":[0.9990589,0.00003984159,0.00006987128,0.000060024264,0.000018659435,0.000024496569,0.00043072956,0.000007616286,0.00028985023],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99925643,0.00008258715,0.00025698368,0.00019362167,0.000009563947,0.00020083309],"domain_scores_gemma":[0.99949986,0.00007824259,0.00007832152,0.00023551876,0.00009492041,0.00001311561],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015143359,0.00009912084,0.00026589734,0.0001850987,0.00010184688,0.000021951586,0.0000793041,0.00008073274,0.0012747475],"category_scores_gemma":[0.000044592853,0.00008694778,0.00007638493,0.00054126076,0.0000024200558,0.00013265575,0.000030609666,0.00010707397,0.000023209093],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076550874,0.00011534799,0.9388255,0.000019619614,0.00025400613,1.3238017e-7,0.000030957923,0.0003633102,0.054635663,0.000100584984,0.0006093316,0.004969016],"study_design_scores_gemma":[0.0011352706,0.0000216076,0.98023146,0.000016022417,0.00015108885,0.0000025118256,0.00018468521,0.001026321,0.0027173653,0.0000069605676,0.014400608,0.00010606963],"about_ca_topic_score_codex":0.45495594,"about_ca_topic_score_gemma":0.748074,"teacher_disagreement_score":0.29311806,"about_ca_system_score_codex":0.0002148026,"about_ca_system_score_gemma":0.00024457416,"threshold_uncertainty_score":0.9996382},"labels":[],"label_agreement":null},{"id":"W2998821301","doi":"10.1016/j.cmi.2020.01.004","title":"Influenza increases invasive meningococcal disease risk in temperate countries","year":2020,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Nova Scotia Health Authority; University of Toronto; Dalhousie University; University of Alberta; Canadian Blood Services; Public Health Ontario","funders":"Canadian Institutes of Health Research; National Oceanic and Atmospheric Administration; GlaxoSmithKline","keywords":"Confidence interval; Odds ratio; Meningococcal disease; Demography; Medicine; Relative risk; Environmental health; Population; Disease burden; Neisseria meningitidis; Internal medicine; Biology","score_opus":0.03175350713404804,"score_gpt":0.30718668045585407,"score_spread":0.27543317332180606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998821301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969159,0.0012430362,0.000027610178,0.000532465,0.0007616946,0.00025674567,0.000110979214,0.00009855036,0.000053057003],"genre_scores_gemma":[0.9954672,0.0023647798,0.000009713614,0.0017669296,0.0001857079,0.000029522738,0.00013216907,0.000011599959,0.00003238395],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979093,0.0007538121,0.00061454263,0.00045787872,0.0000041291237,0.0002603094],"domain_scores_gemma":[0.9989461,0.0005744922,0.0001909206,0.00013474381,0.00007118881,0.00008258886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041070464,0.00019953004,0.00041202578,0.000081401195,0.00024063929,0.00002411927,0.00006798651,0.00044254342,0.00045316014],"category_scores_gemma":[0.0015388621,0.00016930832,0.00010489313,0.00015227415,0.00043107133,0.00016898017,0.00011490954,0.0005642299,0.00039208407],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008443947,0.00014952655,0.9043889,0.000022282456,0.0000902858,0.0000012716703,0.000074576485,0.0000061927512,0.09208489,0.00022515762,0.0013099548,0.0008025872],"study_design_scores_gemma":[0.0031860918,0.0007572894,0.8459999,0.000045067987,0.000104053375,0.00003711536,0.000028821076,0.000005519709,0.005175853,0.00016382808,0.14421336,0.00028309744],"about_ca_topic_score_codex":0.00044972164,"about_ca_topic_score_gemma":0.00026791551,"teacher_disagreement_score":0.14290342,"about_ca_system_score_codex":0.000017391822,"about_ca_system_score_gemma":0.000084294195,"threshold_uncertainty_score":0.6904193},"labels":[],"label_agreement":null},{"id":"W2999172795","doi":"10.1371/journal.pone.0217255","title":"A competence-regulated toxin-antitoxin system in Haemophilus influenzae","year":2020,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Deafness and Other Communication Disorders; Canadian Institutes of Health Research; National Institutes of Health; University of British Columbia","keywords":"Haemophilus influenzae; Antitoxin; Microbiology; Toxin; Virology; Biology; Antibiotics","score_opus":0.04277773994911026,"score_gpt":0.22378169566971587,"score_spread":0.18100395572060562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999172795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99736303,0.0004526824,0.000006591809,0.0007411047,0.00021442842,0.0002421115,0.000023478326,0.00019729436,0.0007593037],"genre_scores_gemma":[0.99937874,0.000016519485,0.00008671709,0.00019111902,0.000094574025,0.000021701866,0.00003688499,0.00001363499,0.00016011596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991513,0.000098461176,0.0002854159,0.00022213506,0.000017171087,0.00022549766],"domain_scores_gemma":[0.999643,0.00003857036,0.000066561035,0.00016250559,0.000061391904,0.000027968219],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006646667,0.00012703193,0.0003432385,0.00007542119,0.00007861219,0.000017219098,0.00013178209,0.0001742169,0.00040683345],"category_scores_gemma":[0.000061495106,0.00011782353,0.00004316368,0.0002741019,0.00004141766,0.0000821326,0.00006780714,0.00020609575,0.0011024612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011404591,0.00035532395,0.011473304,0.000109728586,0.0001929356,0.0000045614,0.00020245985,0.0000053029685,0.98650396,0.00063086767,0.0002480306,0.00015947812],"study_design_scores_gemma":[0.003919199,0.000556159,0.06832169,0.0005850133,0.0001665325,0.000041257368,0.00030562404,0.0002604274,0.9174394,0.000033939818,0.00788879,0.00048196863],"about_ca_topic_score_codex":0.00018897136,"about_ca_topic_score_gemma":0.00003667188,"teacher_disagreement_score":0.069064565,"about_ca_system_score_codex":0.000034546923,"about_ca_system_score_gemma":0.000026605896,"threshold_uncertainty_score":0.9996753},"labels":[],"label_agreement":null},{"id":"W2999274357","doi":"10.3389/fmicb.2019.02981","title":"Structural Basis for Evasion of Nutritional Immunity by the Pathogenic Neisseriae","year":2020,"lang":"en","type":"review","venue":"Frontiers in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Georgia State University; National Institute of General Medical Sciences; Directorate for Biological Sciences; University of Toronto; Purdue University","keywords":"Neisseria; Neisseria gonorrhoeae; Biology; Neisseria meningitidis; Bacterial outer membrane; Virulence; Microbiology; Computational biology; Genetics; Bacteria; Gene","score_opus":0.022907899796734247,"score_gpt":0.27406600478049625,"score_spread":0.251158104983762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999274357","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023685838,0.9870206,0.00016084433,0.000087853405,0.0045920545,0.0011527088,0.0045840526,0.000021983647,0.00001130029],"genre_scores_gemma":[0.00044987508,0.99177593,0.0003898274,0.00003646895,0.00011195366,0.00023760853,0.006777278,0.000039419865,0.00018165374],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99761534,0.0007767172,0.00081930927,0.00041223835,0.0000064740757,0.0003699457],"domain_scores_gemma":[0.9987378,0.00034465294,0.0004814809,0.00034550176,0.000074795564,0.000015757101],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00026827448,0.0003987039,0.0017706977,0.00017582386,0.000188638,0.000009861266,0.0005576042,0.00095044565,0.00025491777],"category_scores_gemma":[0.00013610498,0.0002680976,0.00061735266,0.00027588237,0.00028645783,0.00003994616,0.00014643608,0.00059978355,0.00002214352],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037538676,0.00016617736,0.00013611668,0.0038394355,0.0014316184,8.2485633e-7,0.000117217176,3.891366e-7,0.24599707,0.0001531006,0.17227373,0.57550895],"study_design_scores_gemma":[0.0006977566,0.00018660958,0.000020441857,0.000653008,0.0003619836,0.00019479085,0.000055034732,4.157202e-7,0.00080459245,0.00009436161,0.9966758,0.00025522654],"about_ca_topic_score_codex":0.000054720895,"about_ca_topic_score_gemma":0.00001404537,"teacher_disagreement_score":0.82440203,"about_ca_system_score_codex":0.00011066834,"about_ca_system_score_gemma":0.00017819204,"threshold_uncertainty_score":0.9999771},"labels":[],"label_agreement":null},{"id":"W3000245576","doi":"10.28933/ijcr-2019-12-1105","title":"Supraglottitis secondary to Haemophilus influenzae serotype f infection: Case report and review of literature","year":2020,"lang":"en","type":"article","venue":"International Journal of Case Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"NOSM University","funders":"Canadian Immunization Research Network; Lakehead University; Northwestern University","keywords":"Haemophilus influenzae; Epiglottitis; Serotype; Medicine; Haemophilus; Microbiology; Virology; Pediatrics; Biology; Antibiotics; Bacteria","score_opus":0.015158117186394697,"score_gpt":0.29356280352630676,"score_spread":0.27840468633991206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000245576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9737047,0.019515308,0.000084689935,0.0034980148,0.0026706455,0.00013631818,0.00003720342,0.000013016427,0.0003401331],"genre_scores_gemma":[0.99594814,0.002415867,0.000120770404,0.0010808522,0.0003095673,0.000003176553,0.000026627926,0.00000934535,0.000085681815],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9986606,0.000072617564,0.0009742009,0.00015611244,0.00005021871,0.00008621454],"domain_scores_gemma":[0.99765646,0.00004479195,0.00084308436,0.00012750376,0.0012579749,0.000070182934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003722088,0.00011839891,0.00033194336,0.00014232085,0.000050710012,0.00003180222,0.000041394556,0.00010443349,0.0004671221],"category_scores_gemma":[0.000658964,0.00009940561,0.00013469798,0.00015987898,0.000031978732,0.00025704753,0.00007801167,0.00028175872,0.000004958092],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012642026,0.00005828709,0.004725344,0.00036905767,0.00053596974,0.9589443,0.0002683715,0.00000736153,0.0133028,0.000038539973,0.017095648,0.004527877],"study_design_scores_gemma":[0.00026206207,0.00021087388,0.001994159,0.0010118509,0.00007009071,0.8563821,0.000011141862,2.373436e-7,0.0032614325,0.00003878237,0.13668115,0.00007613159],"about_ca_topic_score_codex":0.00018665982,"about_ca_topic_score_gemma":0.00003502571,"teacher_disagreement_score":0.119585514,"about_ca_system_score_codex":0.000028943197,"about_ca_system_score_gemma":0.00013445797,"threshold_uncertainty_score":0.5114659},"labels":[],"label_agreement":null},{"id":"W3000640454","doi":"10.17269/s41997-019-00275-4","title":"Cost-effectiveness of alternative strategies for vaccination of adolescents against serogroup B IMD with the MenB-FHbp vaccine in Canada","year":2020,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Pfizer (Canada)","funders":"Pfizer Canada; Pfizer","keywords":"Vaccination; Incidence (geometry); Medicine; Carriage; Population; Demography; Transmission (telecommunications); Immunization; Cost effectiveness; Environmental health; Pediatrics; Immunology","score_opus":0.05692493193760095,"score_gpt":0.2900927534814136,"score_spread":0.23316782154381266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000640454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99159086,0.0005573594,0.0014627633,0.005335556,0.00037211095,0.00052478054,0.00012782197,0.0000016114518,0.000027163693],"genre_scores_gemma":[0.99956155,0.000039753882,0.000016305787,0.0002915999,0.0000419789,0.000011019616,0.000025988023,0.000009070462,0.0000027440128],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868584,0.00044009823,0.0004400553,0.000095273805,0.00002749198,0.00031122428],"domain_scores_gemma":[0.9986095,0.00014625397,0.00052888744,0.00007988527,0.00046338988,0.00017212763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009308106,0.000101755584,0.0003764921,0.00016190497,0.00008905029,0.00001576662,0.00019430998,0.000048846032,0.000038405422],"category_scores_gemma":[0.00011030097,0.00006976558,0.000041854048,0.0002862718,0.000023424707,0.00018909966,0.0000078373005,0.00020751593,2.508291e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002017207,0.0003455825,0.8044884,0.0024861218,0.0014978703,0.000023390168,0.0114880875,0.0025591594,0.03378837,0.00958806,0.009662137,0.12205558],"study_design_scores_gemma":[0.006479935,0.0017621851,0.96259403,0.00041532097,0.000027323824,0.00005198877,0.009570094,0.00005306811,0.0039101187,0.0000954364,0.014860773,0.00017971684],"about_ca_topic_score_codex":0.74454147,"about_ca_topic_score_gemma":0.978289,"teacher_disagreement_score":0.23374757,"about_ca_system_score_codex":0.0005520715,"about_ca_system_score_gemma":0.013067662,"threshold_uncertainty_score":0.9925273},"labels":[],"label_agreement":null},{"id":"W3002431503","doi":"10.1016/j.vaccine.2019.12.051","title":"Estimated susceptibility of Canadian meningococcal B isolates to a meningococcal serogroup B vaccine (MenB-FHbp)","year":2020,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Alberta; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; Stollery Children's Hospital; University of British Columbia","funders":"Novartis; Pfizer","keywords":"Neisseria meningitidis; Meningococcal disease; Biology; Microbiology; Virology; Neisseriaceae; Meningococcal vaccine; Genotype; Immunization; Neisseria; Antibody; Bacteria; Immunology; Gene; Antibiotics; Genetics","score_opus":0.027486647120664544,"score_gpt":0.25893482785722266,"score_spread":0.23144818073655812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3002431503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918403,0.0003058289,0.00012844,0.0060679875,0.000485774,0.0005527017,0.000123758,0.00018432153,0.00031088496],"genre_scores_gemma":[0.9984241,0.000024950466,0.0005335184,0.00045544666,0.00013594973,0.000023970751,0.00018767036,0.000035948688,0.00017840974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99810416,0.00013001479,0.00062031095,0.0005216076,0.000020622705,0.0006032756],"domain_scores_gemma":[0.99892133,0.00009040441,0.00013524265,0.0003790805,0.00020089265,0.000273047],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002385344,0.0003196348,0.00062204094,0.0004384797,0.00020810864,0.000025922309,0.00030069085,0.00028685367,0.004483497],"category_scores_gemma":[0.00025602715,0.00028372926,0.00012669846,0.0012581839,0.000012570525,0.00012903144,0.00014999715,0.00030391314,0.00056908285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058620516,0.00010492105,0.06852875,0.000034529072,0.00018649657,0.0000022078686,0.0007283472,0.000044152108,0.9136934,0.00018363973,0.014319086,0.0015882545],"study_design_scores_gemma":[0.007287346,0.003512242,0.30074155,0.00011498951,0.00024774694,0.00011046915,0.00042202466,0.0003344348,0.41514108,0.00007435508,0.27102825,0.0009855175],"about_ca_topic_score_codex":0.0593616,"about_ca_topic_score_gemma":0.055754896,"teacher_disagreement_score":0.49855235,"about_ca_system_score_codex":0.00006771755,"about_ca_system_score_gemma":0.00011852899,"threshold_uncertainty_score":0.9999615},"labels":[],"label_agreement":null},{"id":"W3004732273","doi":"10.1016/j.bpj.2019.11.928","title":"STED Superresolution Imaging of DUOX1 and CEN2 Reveals Substructure of Membrane Macromolecular Complexes in Human Bronchial Epithelial Cells","year":2020,"lang":"en","type":"article","venue":"Biophysical Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"STED microscopy; Cell biology; Biology; NADPH oxidase; Cilium; Superresolution; Biophysics; Chemistry; Reactive oxygen species","score_opus":0.011191697612882754,"score_gpt":0.23520178466178246,"score_spread":0.22401008704889971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004732273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920905,0.00012080183,0.00006774467,0.00019555689,0.00024489049,0.00007432641,0.000065491855,0.0000075291928,0.000014589275],"genre_scores_gemma":[0.99970657,0.000026113725,0.00004711248,0.000027382297,0.00016085956,5.7678017e-7,0.000018410501,0.000007882435,0.000005091476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991922,0.00015603952,0.0003466814,0.00012534129,0.000022135964,0.00015762405],"domain_scores_gemma":[0.99966735,0.000025800508,0.00015259176,0.000065061,0.000057397043,0.000031810614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007105867,0.00010731208,0.00032096842,0.000060565995,0.000084147534,0.0000113748265,0.00008929322,0.00007998895,0.00014093937],"category_scores_gemma":[0.000015853973,0.0000894906,0.00008549232,0.000110417954,0.00014345208,0.00006850256,0.00004625398,0.00025068273,0.0000028444033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001664812,0.00007347049,0.0023090318,0.000030468385,0.000041272782,0.000003506702,0.00025453875,0.000006103426,0.99639165,0.0003608128,0.00006446016,0.0002982138],"study_design_scores_gemma":[0.0013693251,0.00016935979,0.06104737,0.000030268915,0.000030435922,0.000070405484,0.000051615778,0.0000166924,0.93683606,0.000109070614,0.00018460007,0.00008480543],"about_ca_topic_score_codex":0.0001260603,"about_ca_topic_score_gemma":0.0000061549486,"teacher_disagreement_score":0.05955559,"about_ca_system_score_codex":0.000009709593,"about_ca_system_score_gemma":0.000015265712,"threshold_uncertainty_score":0.36493206},"labels":[],"label_agreement":null},{"id":"W3005509359","doi":"10.3201/eid2603.190160","title":"Randomized Trial of 2 Schedules of Meningococcal B Vaccine in Adolescents and Young Adults, Canada1","year":2020,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Nova Scotia Health Authority; McGill University Health Centre; University of Calgary; University of British Columbia; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research; Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Vaccination; Immunogenicity; Reactogenicity; Tolerability; Meningococcal disease; Titer; Meningococcal vaccine; Randomized controlled trial; Adverse effect; Outbreak; Neisseria meningitidis; Immunization; Pediatrics; Internal medicine; Immunology; Virology; Antibody; Biology","score_opus":0.007232649232643531,"score_gpt":0.23545130362078573,"score_spread":0.2282186543881422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005509359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966125,0.0017736886,0.000036045763,0.000110220695,0.0008184533,0.00051256455,0.000036170833,0.000043144653,0.000057211968],"genre_scores_gemma":[0.99960154,0.00021354434,0.0000055059677,0.000023398274,0.00007056089,0.00003960005,0.0000255337,0.00001142296,0.000008904998],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99891686,0.00022467747,0.00047636506,0.0001957733,0.00002044986,0.00016586126],"domain_scores_gemma":[0.9995188,0.00006978305,0.00020313996,0.0001017348,0.00006677472,0.000039734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011661928,0.00014280334,0.00061317824,0.00012870008,0.00005805662,0.000005907873,0.00006257159,0.00008574147,0.0001322449],"category_scores_gemma":[0.0004526684,0.00012480874,0.000117321484,0.00019405175,0.00007650613,0.00007095806,0.000055912573,0.00011327081,0.0000026032124],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.5322349,0.00063052337,0.44222,0.00035137692,0.00032722982,0.0000015879866,0.0005934221,0.000027796223,0.020865912,0.000689312,0.0002170281,0.0018409294],"study_design_scores_gemma":[0.9491348,0.00047785457,0.044964936,0.00027815308,0.00020314653,0.0000071338372,0.00016405054,0.000066472705,0.004085126,0.00009194542,0.0003238516,0.00020248536],"about_ca_topic_score_codex":0.005482996,"about_ca_topic_score_gemma":0.0010129632,"teacher_disagreement_score":0.41689995,"about_ca_system_score_codex":0.000013352585,"about_ca_system_score_gemma":0.00005189269,"threshold_uncertainty_score":0.8288686},"labels":[],"label_agreement":null},{"id":"W3005778269","doi":"10.14745/ccdr.v46i23a03","title":"Summary of the NACI Statement on the Use of Bivalent Factor H Binding Protein Meningococcal Serogroup B (MenB-fHBP) Vaccine for the Prevention of Meningococcal B Disease","year":2020,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Alberta","funders":"Health Canada; Centers for Disease Control and Prevention; Association of Medical Microbiology and Infectious Disease Canada; Public Health Agency; Public Health Agency of Canada","keywords":"Neisseria meningitidis; Meningococcal vaccine; Meningococcal disease; Medicine; Immunogenicity; Outbreak; Virology; Vaccination; Bivalent (engine); Immunology; Antigen; Immunization; Biology; Chemistry","score_opus":0.07348274253866732,"score_gpt":0.2732381055730466,"score_spread":0.1997553630343793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005778269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921733,0.00065329025,0.0000627552,0.004106266,0.00024539526,0.0019783224,0.00075239636,0.000014635215,0.00001360015],"genre_scores_gemma":[0.99879354,0.00006259266,0.000023883162,0.00008090962,0.000020033382,0.0002978909,0.00019712019,0.000019924097,0.0005041053],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982479,0.0004245894,0.0007936524,0.00020799486,0.00009034631,0.000235523],"domain_scores_gemma":[0.99738985,0.00045892104,0.0007556302,0.0011244527,0.00018769247,0.00008344163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034310116,0.00019148765,0.00034571142,0.000029885234,0.00038192753,0.000014728788,0.0005024389,0.00005265453,0.00017745826],"category_scores_gemma":[0.0005666623,0.00010376454,0.00024596302,0.00020059787,0.000112997215,0.000078473684,0.00033909312,0.00021598575,4.284522e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00612853,0.0013091671,0.06898835,0.0009772888,0.0025905566,0.000013741945,0.00046551952,0.0009207683,0.88267606,0.0021965383,0.03178005,0.0019534172],"study_design_scores_gemma":[0.004850293,0.0010476381,0.13991562,0.0015619912,0.0016185179,0.000018931029,0.0013116018,0.00080101594,0.27716917,0.00013815738,0.570796,0.00077106187],"about_ca_topic_score_codex":0.018651154,"about_ca_topic_score_gemma":0.0081873955,"teacher_disagreement_score":0.6055069,"about_ca_system_score_codex":0.00009509679,"about_ca_system_score_gemma":0.00084285764,"threshold_uncertainty_score":0.98788375},"labels":[],"label_agreement":null},{"id":"W3009036797","doi":"10.3390/ijms21051627","title":"RNA-Sequencing Analyses of Small Bacterial RNAs and their Emergence as Virulence Factors in Host-Pathogen Interactions","year":2020,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virulence; Biology; RNA; Small RNA; Pathogen; Gene; Genetics; Pathogenicity island; Transfer RNA; Computational biology; Virulence factor","score_opus":0.09088131048175273,"score_gpt":0.37378526494037545,"score_spread":0.2829039544586227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009036797","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27921462,0.71663415,0.00034459718,0.00007607731,0.0034063305,0.00011629265,0.00008342227,0.000005818636,0.00011868226],"genre_scores_gemma":[0.15817177,0.84147286,0.00017544246,0.000016425784,0.00011382854,0.0000039007473,0.000020024778,0.000011054099,0.000014701441],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982635,0.0002982661,0.0009561862,0.00025436972,0.00007072792,0.00015698522],"domain_scores_gemma":[0.99823594,0.00021700091,0.001140454,0.000094388,0.0002754542,0.000036770612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036944269,0.00024891985,0.0008440202,0.0006535585,0.00006985597,0.00006964211,0.00077507936,0.00014009915,0.0002899808],"category_scores_gemma":[0.00036530482,0.00016673702,0.0003734269,0.0003673034,0.00022928121,0.0002556097,0.00017526209,0.00037600644,0.00000789314],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033249988,0.000062927895,0.00008801911,0.00012164299,0.00064637617,0.00003710785,0.00041511125,0.00001576642,0.88716066,0.00019375351,0.000013665049,0.11121173],"study_design_scores_gemma":[0.0010252943,0.0012344592,0.0004218598,0.011306051,0.00078840123,0.0037926764,0.001927566,0.000016831644,0.25047252,0.00049156015,0.72759706,0.00092571793],"about_ca_topic_score_codex":0.00033450243,"about_ca_topic_score_gemma":0.000054867785,"teacher_disagreement_score":0.7275834,"about_ca_system_score_codex":0.00007012941,"about_ca_system_score_gemma":0.0005185213,"threshold_uncertainty_score":0.6799339},"labels":[],"label_agreement":null},{"id":"W3009540216","doi":"10.1099/acmi.fis2019.po0046","title":"The Half-Life of Maternal Transplacental Antibodies in infants from mothers vaccinated with diphtheria, tetanus and pertussis: An individual participant data meta-analysis","year":2020,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Diphtheria; Medicine; Tetanus; Vaccination; Transplacental; Pediatrics; Immunization; Pregnancy; Antibody; Socioeconomic status; Demography; Obstetrics; Immunology; Fetus; Population; Biology; Placenta; Environmental health","score_opus":0.13943062424060443,"score_gpt":0.3235905499103163,"score_spread":0.1841599256697119,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009540216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98960125,0.007099733,0.000025211843,0.0010723714,0.00012557051,0.00021320244,0.0018270666,0.000027308146,0.0000083013965],"genre_scores_gemma":[0.9983141,0.00028941003,0.00003621398,0.00021284987,0.000019829675,0.000017243965,0.0010823646,0.000015697065,0.000012307609],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981131,0.0005137457,0.0005042492,0.0005206319,0.000014110715,0.000334189],"domain_scores_gemma":[0.9989939,0.0002053467,0.00024177157,0.00047275916,0.000043260512,0.000043004307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025289544,0.00024508472,0.0009276189,0.00010084983,0.00015779331,0.00007206407,0.00082110113,0.00018995124,0.0008126789],"category_scores_gemma":[0.000040693776,0.00013707596,0.00011547648,0.00029937117,0.00026116334,0.0003272867,0.00029209832,0.00019866867,0.000007055036],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015089641,0.00016541543,0.26944855,0.000015395099,0.10415792,0.0000049347977,0.0020009798,0.000034507197,0.6219913,0.000028842509,0.00012293622,0.00052030274],"study_design_scores_gemma":[0.0043214667,0.0007044335,0.78326696,0.000014136902,0.11523305,0.00007043398,0.0018822191,0.0001024724,0.08996076,0.000032496297,0.0037737247,0.0006378391],"about_ca_topic_score_codex":0.0051492066,"about_ca_topic_score_gemma":0.008041282,"teacher_disagreement_score":0.5320305,"about_ca_system_score_codex":0.0000038824674,"about_ca_system_score_gemma":0.00004381807,"threshold_uncertainty_score":0.8898264},"labels":[],"label_agreement":null},{"id":"W3009652969","doi":"10.1128/msphere.00883-19","title":"Culture-Confirmed Invasive Meningococcal Disease in Canada, 2010 to 2014: Characterization of Serogroup B <i>Neisseria meningitidis</i> Strains and Their Predicted Coverage by the 4CMenB Vaccine","year":2020,"lang":"en","type":"article","venue":"mSphere","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Neisseria meningitidis; Meningococcal disease; Meningococcal vaccine; Neisseriaceae; Microbiology; Virology; Medicine; Bacterial meningitis; Biology; Meningitis; Bacteria; Antibiotics; Pediatrics; Genetics","score_opus":0.006697881543629932,"score_gpt":0.18736085443533537,"score_spread":0.18066297289170544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009652969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99603534,0.00031092914,0.00007324107,0.0016708634,0.00026400702,0.00045542823,0.0011269085,0.000022806056,0.000040504478],"genre_scores_gemma":[0.9983141,0.00010113476,0.0000033237,0.00041640783,0.00004253976,0.000045905752,0.00083453575,0.000013862664,0.00022821351],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99917024,0.00011295187,0.0002667274,0.00023055005,0.00001446191,0.00020506955],"domain_scores_gemma":[0.9995919,0.000040183528,0.00010264187,0.00014021511,0.000050186496,0.00007490179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004855393,0.00017233028,0.00024871927,0.000014119574,0.000096572,0.00001957591,0.0001269921,0.00008393507,0.00072674046],"category_scores_gemma":[0.000043929842,0.000117191565,0.000028067503,0.00014484666,0.000022644595,0.00009013261,0.00006706816,0.00016017024,0.0000072645344],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023410193,0.00003354709,0.033385593,0.000023258732,0.00006432656,8.051422e-7,0.0009723697,0.000008934627,0.9524845,0.000021927526,0.012251257,0.00051937986],"study_design_scores_gemma":[0.002377692,0.0003293571,0.76974475,0.00006693533,0.00005116807,0.000009465374,0.00082313805,0.00003479823,0.19237079,0.000017101629,0.033873934,0.0003008888],"about_ca_topic_score_codex":0.09507449,"about_ca_topic_score_gemma":0.1827313,"teacher_disagreement_score":0.7601137,"about_ca_system_score_codex":0.000036430825,"about_ca_system_score_gemma":0.00019326623,"threshold_uncertainty_score":0.9109515},"labels":[],"label_agreement":null},{"id":"W3009795769","doi":"10.3138/jammi.2019-0015","title":"Emergence of a clone of invasive <i>fucK</i>-negative serotype e <i>Haemophilus influenzae</i> in British Columbia","year":2020,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"BC Mental Health & Substance Use Services; Public Health Agency of Canada","funders":"","keywords":"Haemophilus influenzae; Serotype; Microbiology; Pulsed-field gel electrophoresis; Operon; Biology; Virology; Genotype; Genetics; Gene; Escherichia coli; Antibiotics","score_opus":0.005706650482373094,"score_gpt":0.20390861418550424,"score_spread":0.19820196370313115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009795769","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955505,0.0010126597,0.0000028635932,0.0021962011,0.0008520269,0.0001277047,0.00022544633,0.0000024567646,0.000030130792],"genre_scores_gemma":[0.99855274,0.00061320956,0.0000031397215,0.0007364557,0.00004628204,0.0000019951517,0.000007960436,0.000005045346,0.000033149525],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985229,0.00040624762,0.0007585067,0.00010597112,0.000060343104,0.00014605757],"domain_scores_gemma":[0.99784225,0.00039225223,0.0012167334,0.0000753712,0.0003979391,0.000075449905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041535217,0.00007977378,0.00048129898,0.000034495228,0.00006724492,0.000005178946,0.00020618981,0.00022710187,0.0004571398],"category_scores_gemma":[0.003439793,0.00008084892,0.00011362785,0.00025511088,0.00016932112,0.00006136534,0.00009231231,0.00036522766,3.9334134e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015441755,0.0001605609,0.797845,0.00010695725,0.00039639958,0.000005449323,0.00015474061,0.000017770575,0.16567926,0.000022721548,0.035037726,0.00041898628],"study_design_scores_gemma":[0.0065872357,0.0007991305,0.9542467,0.00066957285,0.0003412994,0.00022838857,0.00048423695,0.0000035419137,0.02805033,0.00039819384,0.007940686,0.00025069638],"about_ca_topic_score_codex":0.23468195,"about_ca_topic_score_gemma":0.6999444,"teacher_disagreement_score":0.4652624,"about_ca_system_score_codex":0.000065188186,"about_ca_system_score_gemma":0.0012880289,"threshold_uncertainty_score":0.77041435},"labels":[],"label_agreement":null},{"id":"W3010391404","doi":"10.1099/acmi.fis2019.po0136","title":"National Audit of Meningitis Management (NAMM): a National Infection Trainee Collaborative for Audit and Research (NITCAR) audit of adherence to the 2016 UK joint specialist societies’ guideline on the diagnosis and management of acute meningitis in adults","year":2020,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Guideline; Meningitis; Lumbar puncture; Ceftriaxone; Audit; Neisseria meningitidis; Intensive care medicine; Pediatrics; Etiology; Antibiotics; Internal medicine; Emergency medicine; Cerebrospinal fluid; Pathology","score_opus":0.06865434247065136,"score_gpt":0.35629537057845007,"score_spread":0.2876410281077987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010391404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978789,0.00047404753,0.00027115276,0.014889519,0.00041340027,0.0021203535,0.0021459656,0.000012300886,0.0008842718],"genre_scores_gemma":[0.9957675,0.0024691138,0.00031819305,0.00025354646,0.00009040579,0.0006350624,0.00025195346,0.000011308446,0.00020294414],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998504,0.0002654132,0.00060184253,0.00034815585,0.000052773514,0.00022785424],"domain_scores_gemma":[0.99826396,0.00048020724,0.000310185,0.000121922225,0.00080554176,0.000018203835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087618345,0.00016003104,0.00033870456,0.00020154964,0.00019907625,0.000021253776,0.00024313448,0.00013591594,0.00031811764],"category_scores_gemma":[0.00017377433,0.00011183727,0.00006472577,0.00053157477,0.00034321495,0.00007710676,0.0003707626,0.00015925232,0.0000048244415],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022344252,0.00040277958,0.0036886923,0.0006054693,0.0028238131,0.000002661359,0.0030001178,0.00016277288,0.2883471,0.03897227,0.65104544,0.008714485],"study_design_scores_gemma":[0.016689831,0.010394123,0.16501896,0.0026258617,0.0006132017,0.0000706488,0.0049305246,0.000107092885,0.39884767,0.008454003,0.39107424,0.0011738146],"about_ca_topic_score_codex":0.0002382587,"about_ca_topic_score_gemma":0.00035736692,"teacher_disagreement_score":0.25997117,"about_ca_system_score_codex":0.00006843761,"about_ca_system_score_gemma":0.00008529679,"threshold_uncertainty_score":0.45605916},"labels":[],"label_agreement":null},{"id":"W3010451358","doi":"10.1099/acmi.fis2019.po0123","title":"The management of adult patients with meningitis at Arrowe Park Hospital – A complete audit cycle","year":2020,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Audit; Meningitis; Blood culture; Emergency medicine; Psychological intervention; Antibiotics; Pediatrics; Nursing; Business; Accounting","score_opus":0.008259608481882496,"score_gpt":0.21409496891989446,"score_spread":0.20583536043801196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3010451358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966114,0.00019083278,0.000038376777,0.0013953571,0.0007216178,0.00037491016,0.00022905506,0.000046995126,0.0003914157],"genre_scores_gemma":[0.9988795,0.000113380906,0.00004960835,0.00017004843,0.000029810833,0.00004036884,0.00050671597,0.000016307264,0.0001942452],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989616,0.00009263206,0.000302996,0.00030743727,0.000009343766,0.00032599166],"domain_scores_gemma":[0.9992918,0.00006974746,0.00023338286,0.00024133615,0.00014109514,0.000022644881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000399242,0.00017947308,0.0002738325,0.000027218015,0.0003274149,0.000021690184,0.00042821438,0.00012166303,0.00037313692],"category_scores_gemma":[0.000011049237,0.00011402823,0.0000695582,0.00014728264,0.00024908214,0.00008632446,0.00041543815,0.00012519257,0.00023789308],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002045162,0.0004960197,0.19723105,0.00015421183,0.0031133317,0.000007380287,0.00067553075,0.000015985437,0.74487424,0.0035343743,0.041390486,0.0064622476],"study_design_scores_gemma":[0.011477289,0.0031739168,0.31320897,0.00014825014,0.00041749352,0.000061321916,0.00031259182,0.0000036556696,0.1181682,0.00015084186,0.5519088,0.0009686476],"about_ca_topic_score_codex":0.0000712323,"about_ca_topic_score_gemma":0.00006552465,"teacher_disagreement_score":0.626706,"about_ca_system_score_codex":0.00002369708,"about_ca_system_score_gemma":0.000010885917,"threshold_uncertainty_score":0.46499366},"labels":[],"label_agreement":null},{"id":"W3013494640","doi":"10.1099/mgen.0.000348","title":"Two cases of type-a Haemophilus influenzae meningitis within the same week in the same hospital are phylogenetically unrelated but recently exchanged capsule genes","year":2020,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Haemophilus influenzae; Meningitis; Haemophilus; Microbiology; Gene; Capsule; Medicine; Biology; Genetics; Pediatrics; Bacteria; Antibiotics","score_opus":0.02736911642500804,"score_gpt":0.23778734697943957,"score_spread":0.21041823055443154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013494640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99258095,0.0028851097,0.0000074251843,0.0025300356,0.0011257757,0.0005003619,0.00028345664,0.00003568663,0.00005122051],"genre_scores_gemma":[0.9981906,0.00031083898,0.00012391512,0.00090830954,0.00021115883,0.0000150626565,0.0001145992,0.00003227215,0.00009325829],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984857,0.00032741934,0.0005128979,0.0003199495,0.00002338578,0.0003306797],"domain_scores_gemma":[0.9991252,0.0001231294,0.00027420785,0.00031707482,0.00013238336,0.000028001898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023508268,0.0002507818,0.00038535363,0.00006191551,0.00022209046,0.000045619792,0.000432368,0.00023364768,0.0001774464],"category_scores_gemma":[0.0001563847,0.00017416687,0.00010544546,0.00033640434,0.00024563412,0.000048191636,0.00017185177,0.0003936183,0.0001261017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000245961,0.00014078271,0.0012752269,0.000016055274,0.0001459584,0.000013642115,0.0037116145,0.00019165722,0.9921666,0.00011611865,0.0013730959,0.0006032957],"study_design_scores_gemma":[0.00593571,0.0022135905,0.025452573,0.00010968102,0.0003790337,0.0007873108,0.00606463,0.000039469665,0.8988298,0.00021820478,0.058973595,0.0009964107],"about_ca_topic_score_codex":0.0016103408,"about_ca_topic_score_gemma":0.00097503857,"teacher_disagreement_score":0.0933368,"about_ca_system_score_codex":0.000047360547,"about_ca_system_score_gemma":0.00010158053,"threshold_uncertainty_score":0.7102319},"labels":[],"label_agreement":null},{"id":"W3015772434","doi":"10.23750/abm.v91i3-s.9442","title":"Vaccines are underused in pregnancy: what about knowledge, attitudes and practices of providers?","year":2020,"lang":"en","type":"review","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Pregnancy; Medicine; Business; Biology","score_opus":0.07714526291173629,"score_gpt":0.3371726621273503,"score_spread":0.260027399215614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015772434","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004937438,0.99614716,5.5377313e-7,0.00015578725,0.0011446553,0.001803789,0.000025242356,0.00004668509,0.00018239733],"genre_scores_gemma":[0.0024630318,0.9950111,0.000005528753,0.0000081205435,0.000086647226,0.0018270141,0.000060052986,0.000033272314,0.00050524634],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982616,0.00036949202,0.00060482894,0.00044193753,0.000012102205,0.0003100494],"domain_scores_gemma":[0.9980884,0.00037511552,0.0011916017,0.00024836138,0.00006517478,0.000031345164],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018478392,0.0003385321,0.0015150442,0.00023255157,0.00006173497,0.00009590327,0.00019819604,0.0004929178,0.00004878484],"category_scores_gemma":[0.0003950348,0.0002594593,0.00016533998,0.0003257128,0.000065872286,0.000500614,0.00015955475,0.00038091562,0.00002925019],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021204512,0.00017895401,0.00088150083,0.014507441,0.00038308772,0.0000021695312,0.00009308113,2.0020156e-8,0.0000073583237,0.000060358572,0.00030890224,0.9835559],"study_design_scores_gemma":[0.0005738229,0.00003306211,0.015131343,0.010892213,0.00041640672,0.000046940957,0.00007435971,3.4611077e-8,0.000022627397,0.000015648695,0.97253907,0.00025445488],"about_ca_topic_score_codex":0.000073920186,"about_ca_topic_score_gemma":0.0005900989,"teacher_disagreement_score":0.98330146,"about_ca_system_score_codex":0.000042253174,"about_ca_system_score_gemma":0.00011897289,"threshold_uncertainty_score":0.99998575},"labels":[],"label_agreement":null},{"id":"W3020937799","doi":"10.1093/cid/ciaa518","title":"A Call for Caution in Use of Pertussis Vaccine Effectiveness Studies to Estimate Waning Immunity: A Canadian Immunization Research Network Study","year":2020,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Blood Services; University of Alberta; University of Manitoba; Alberta Health; St Joseph's Health Centre; University of Calgary; Institute for Clinical Evaluative Sciences; Women's College Hospital; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research; Canadian Immunization Research Network; Ontario Ministry of Health and Long-Term Care; Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Vaccination; Confounding; Pertussis vaccine; Immunization; Vaccine efficacy; Immunity; Public health; Immunology; Pediatrics; Immune system; Internal medicine; Pathology","score_opus":0.19844317567558378,"score_gpt":0.4698002870764672,"score_spread":0.2713571114008834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3020937799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958634,0.0007848688,0.00023538803,0.00038850392,0.0007925511,0.0017790195,0.00007455494,0.000073696945,0.000008033788],"genre_scores_gemma":[0.99910206,0.0001090405,0.000016574055,0.00013267172,0.00013315563,0.00035888556,0.00010476177,0.000026013033,0.000016855709],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99643415,0.0019634238,0.0006986002,0.00038649334,0.000029594576,0.00048772158],"domain_scores_gemma":[0.99529475,0.003502206,0.0001192947,0.0002784601,0.00066640216,0.00013891405],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0014456785,0.00018193363,0.00067692745,0.0002587894,0.00052329665,0.0000404467,0.00014131048,0.00017621156,0.00003290595],"category_scores_gemma":[0.008958049,0.00016297586,0.0001392086,0.00093998737,0.00009002524,0.00015486481,0.00019401757,0.00035931915,0.000023982342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007813802,0.00089180324,0.98790807,0.00010528839,0.00049235835,0.000002870125,0.0007249029,0.002278455,0.0021585023,0.00014775843,0.0015582887,0.0029503405],"study_design_scores_gemma":[0.0026406927,0.00325276,0.99033445,0.00018257312,0.00016859178,0.0000017004489,0.000438662,0.0001321388,0.00013711872,0.00014764362,0.0023755683,0.00018810661],"about_ca_topic_score_codex":0.027008265,"about_ca_topic_score_gemma":0.07431721,"teacher_disagreement_score":0.047308948,"about_ca_system_score_codex":0.00015472792,"about_ca_system_score_gemma":0.00024008557,"threshold_uncertainty_score":0.99938995},"labels":[],"label_agreement":null},{"id":"W3021538298","doi":"10.1136/jnnp.2007.139725","title":"Community-acquired bacterial meningitis in adults","year":2008,"lang":"en","type":"review","venue":"Practical Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Bacterial meningitis; Meningitis; Medicine; Psychology; Intensive care medicine; Psychiatry","score_opus":0.06389165827896466,"score_gpt":0.34212438194321915,"score_spread":0.2782327236642545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021538298","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009685057,0.98258066,0.0000040752434,0.00048406038,0.0052590137,0.00069130585,0.00009055429,0.00014869218,0.0010565894],"genre_scores_gemma":[0.0007930089,0.99768114,0.000023640705,0.000109763816,0.00024945146,0.00016751097,0.00072573574,0.00006589096,0.0001838611],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99333686,0.0046517993,0.00090606656,0.0004790883,0.000017661432,0.00060855167],"domain_scores_gemma":[0.9969644,0.001944392,0.00038901344,0.00061107875,0.000048252525,0.00004284126],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.000263499,0.0005022272,0.0019343941,0.00033815368,0.00029567894,0.000023362767,0.00033652323,0.0015980119,0.001954109],"category_scores_gemma":[0.0009290053,0.0004358079,0.00034126977,0.00030286761,0.00028878864,0.00016921652,0.00036358045,0.002416095,0.0016811311],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018454085,0.00200055,0.0000665139,0.0028092102,0.00058305135,0.00038200963,0.00032200184,1.3885222e-7,0.00064862624,0.0010176479,0.019056516,0.9712683],"study_design_scores_gemma":[0.0009676709,0.00069267675,0.000091627306,0.00050367194,0.00012719595,0.008264932,0.000004820448,1.6338821e-7,0.0000071625605,0.000025971745,0.98899317,0.0003209147],"about_ca_topic_score_codex":0.00054860197,"about_ca_topic_score_gemma":0.00019633157,"teacher_disagreement_score":0.9709474,"about_ca_system_score_codex":0.000033691962,"about_ca_system_score_gemma":0.00020451436,"threshold_uncertainty_score":0.9998854},"labels":[],"label_agreement":null},{"id":"W3025599776","doi":"10.9778/cmajo.20190215","title":"Perinatal health care providers’ approaches to recommending and providing pertussis vaccination in pregnancy: a qualitative study","year":2020,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia; Université Laval; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Pregnancy; Qualitative research; Vaccination; Medicine; Health care; Whooping cough; Obstetrics; Family medicine; Immunology; Political science","score_opus":0.16865892367013752,"score_gpt":0.3680859933632577,"score_spread":0.19942706969312018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025599776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845586,0.0010021518,0.000064243046,0.010809334,0.00016028176,0.0029442003,0.000023580214,0.000036619174,0.00040102782],"genre_scores_gemma":[0.9990112,0.000010927152,0.00021751423,0.00020528119,0.000017178028,0.0003866644,0.000036373956,0.000012983769,0.00010185273],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.9987431,0.00045605013,0.00023425133,0.000361821,0.000011030204,0.000193742],"domain_scores_gemma":[0.9996971,0.000061972096,0.000078523255,0.000101690304,0.000023439823,0.00003727065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002464547,0.00012531434,0.00027547262,0.00008180041,0.00023681358,0.00010802165,0.00015945939,0.00005697929,0.000090980524],"category_scores_gemma":[0.00010411537,0.0001102114,0.000018837709,0.00020361818,0.000008874047,0.00033236464,0.00034213628,0.00014152964,0.00001690026],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024295741,0.00015779962,0.020024342,0.00015561274,0.00007504322,0.0000012475008,0.89538026,0.0000019004971,0.0023668597,0.00046182406,0.00056145596,0.08057071],"study_design_scores_gemma":[0.004644583,0.003526424,0.0788296,0.00027805963,0.000026040707,0.000013230739,0.8974491,0.000014471008,0.0022456239,0.000041422925,0.012473508,0.0004579677],"about_ca_topic_score_codex":0.0022694701,"about_ca_topic_score_gemma":0.0017706761,"teacher_disagreement_score":0.08011275,"about_ca_system_score_codex":0.00009074467,"about_ca_system_score_gemma":0.00006770037,"threshold_uncertainty_score":0.44942904},"labels":[],"label_agreement":null},{"id":"W3028750988","doi":"10.1016/j.jpba.2020.113395","title":"Development of a targeted nanoLC-MS/MS method for quantitation of residual toxins from Bordetella pertussis","year":2020,"lang":"en","type":"article","venue":"Journal of Pharmaceutical and Biomedical Analysis","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bordetella pertussis; Pertussis toxin; Chemistry; Whooping cough; Bordetella; In silico; Toxin; Immunoassay; Chromatography; Virulence; Peptide; Microbiology; Biochemistry; G protein; Bacteria; Virology; Biology; Antibody; Gene; Immunology","score_opus":0.050327706824939325,"score_gpt":0.3594070624473731,"score_spread":0.30907935562243377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3028750988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9273956,0.001494955,0.06796851,0.0027520694,0.00018815156,0.000068154055,0.00011743289,0.000007631245,0.000007536962],"genre_scores_gemma":[0.9633954,0.0002596288,0.036029745,0.00012693179,0.000117835145,0.000002070234,0.000049012364,0.000007423448,0.000011924243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986554,0.00014084727,0.00085839524,0.00014254455,0.00006277228,0.00014003602],"domain_scores_gemma":[0.9988659,0.00038073186,0.00037548444,0.000047626992,0.00022805804,0.000102201644],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045061973,0.00010857969,0.0005992595,0.00021707277,0.00006914414,0.000007118941,0.00010470779,0.00015575338,0.00095037674],"category_scores_gemma":[0.00028235128,0.00007099303,0.00026681297,0.0005187918,0.00012064524,0.000059201942,0.00004199837,0.0001548967,0.000001845592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074768334,0.0002576231,0.001153193,0.000039130206,0.0036874174,8.3882543e-7,0.0005956925,0.000002100061,0.9453927,0.000059938426,0.00033254837,0.047731087],"study_design_scores_gemma":[0.0033433572,0.0008054073,0.01373737,0.000046688445,0.004653193,0.000012125893,0.00047898028,0.0014362669,0.82596606,0.00007672492,0.14925651,0.00018733926],"about_ca_topic_score_codex":0.000051573512,"about_ca_topic_score_gemma":0.000025902747,"teacher_disagreement_score":0.14892396,"about_ca_system_score_codex":0.0000116359,"about_ca_system_score_gemma":0.000080134225,"threshold_uncertainty_score":0.99996287},"labels":[],"label_agreement":null},{"id":"W3032184139","doi":"10.1093/cid/ciaa651","title":"Highlights of the 12th International<i>Bordetella</i>Symposium","year":2020,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Food and Drug Administration; U.S. Food and Drug Administration; Université de Lille; GlaxoSmithKline","keywords":"Bordetella pertussis; Bordetella; Microbiology; Biology; Virulence; Gene; Genetics; Bacteria","score_opus":0.02425125831021131,"score_gpt":0.29852674123419637,"score_spread":0.27427548292398507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3032184139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9829705,0.00035821102,0.000037990718,0.0050467593,0.0064953975,0.00019227064,0.00010156302,0.00014352806,0.004653818],"genre_scores_gemma":[0.9978603,0.00033068104,0.0000012671561,0.0009996006,0.00040167687,0.000010802878,0.000028678907,0.000011575427,0.000355396],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989499,0.00017947408,0.0004744679,0.00023858901,0.000020538375,0.00013705835],"domain_scores_gemma":[0.9991051,0.0002794232,0.00020363266,0.00024215961,0.00012061787,0.00004904422],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007449142,0.00012121882,0.00026825353,0.000025156878,0.00012665972,0.000016782658,0.00026982545,0.00014571397,0.0016724806],"category_scores_gemma":[0.00046764358,0.000078948855,0.0003259402,0.00015843952,0.0002186744,0.00006748409,0.00017032174,0.00018619359,0.00027789254],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016094379,0.001045955,0.8605623,0.00003355678,0.0006197259,0.0000010291428,0.00011451802,0.000025795358,0.09673534,0.0026230665,0.035389498,0.0026882365],"study_design_scores_gemma":[0.0021395916,0.0005031498,0.38951737,0.000033215572,0.00024346002,0.0000072247517,0.000030116122,0.000010889398,0.022993037,0.0003946613,0.5838983,0.00022897653],"about_ca_topic_score_codex":0.000030120586,"about_ca_topic_score_gemma":0.00001005145,"teacher_disagreement_score":0.5485088,"about_ca_system_score_codex":0.000010436543,"about_ca_system_score_gemma":0.000054929424,"threshold_uncertainty_score":0.9992401},"labels":[],"label_agreement":null},{"id":"W3032327206","doi":"10.1097/olq.0000000000001206","title":"Gen2EpiGUI: User-Friendly Pipeline for Analyzing Whole-Genome Sequencing Data for Epidemiological Studies of Neisseria gonorrhoeae","year":2020,"lang":"en","type":"article","venue":"Sexually Transmitted Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Neisseria gonorrhoeae; Whole genome sequencing; Pipeline (software); Genome; Computational biology; Graphical user interface; Medicine; Bioinformatics; Data mining; Genetics; Computer science; Biology; Gene; Programming language","score_opus":0.10403056891660056,"score_gpt":0.34182105647855227,"score_spread":0.2377904875619517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3032327206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85684675,0.025232097,0.09454928,0.0028660854,0.0007829826,0.0014648588,0.017995236,0.00025230128,0.000010385372],"genre_scores_gemma":[0.9877077,0.0003794497,0.0020877377,0.0005300523,0.00036501297,0.00016402622,0.008595643,0.00004262049,0.00012779201],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979029,0.00018589894,0.000778157,0.0006757463,0.00001151845,0.00044574105],"domain_scores_gemma":[0.99781454,0.0010839066,0.00023291509,0.0005050372,0.0002783799,0.000085226166],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031553314,0.00031066354,0.0008720943,0.00007733049,0.00026840318,0.000018154873,0.0005126305,0.00018386534,0.00010640156],"category_scores_gemma":[0.0016571619,0.00024742077,0.00022264237,0.00022699113,0.0001705707,0.00022901785,0.00011043058,0.00012640798,0.000012362628],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017137685,0.0002341004,0.0037750527,0.0006894193,0.0012878383,5.3741394e-7,0.0004172641,0.00019782221,0.9780207,0.0006624408,0.008728703,0.004272355],"study_design_scores_gemma":[0.016294431,0.0057740314,0.027351938,0.00029532754,0.005567692,0.000031998636,0.008610642,0.0021751418,0.015455836,0.0018740429,0.9142649,0.0023040066],"about_ca_topic_score_codex":0.000031855623,"about_ca_topic_score_gemma":0.000027183136,"teacher_disagreement_score":0.9625649,"about_ca_system_score_codex":0.000026258673,"about_ca_system_score_gemma":0.00013946876,"threshold_uncertainty_score":0.9999978},"labels":[],"label_agreement":null},{"id":"W3033885385","doi":"10.1016/j.jinf.2020.05.079","title":"The everchanging epidemiology of meningococcal disease worldwide and the potential for prevention through vaccination","year":2020,"lang":"en","type":"review","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":262,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Meningococcal disease; Neisseria meningitidis; Meningococcal vaccine; Medicine; Vaccination; Conjugate vaccine; Epidemiology; Incidence (geometry); Case fatality rate; Meningitis; Virology; Disease burden; Immunology; Environmental health; Immunization; Pediatrics; Population; Biology; Immune system; Internal medicine","score_opus":0.04862490539823005,"score_gpt":0.36085005052822033,"score_spread":0.3122251451299903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033885385","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006653128,0.9819469,0.013355243,0.0005880825,0.0026927644,0.0007188515,0.000011732424,0.000008698899,0.0000124187745],"genre_scores_gemma":[0.0035255072,0.9956519,0.00006121017,0.0000142932095,0.00052099256,0.000060853305,0.000030182726,0.000015104485,0.00011996171],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99750906,0.0011925965,0.0010026128,0.00012641704,0.000017307186,0.00015199321],"domain_scores_gemma":[0.99620396,0.0015551619,0.0019041647,0.00011050048,0.00020807212,0.000018146255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016289117,0.00017466393,0.0009454831,0.00010689359,0.00035383078,0.000014085593,0.00009598539,0.00020789809,0.000024011693],"category_scores_gemma":[0.0013944694,0.00008641333,0.0007292599,0.00015029548,0.0000870766,0.00014570857,0.00005239249,0.00038915855,0.000002733972],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007877151,0.000052479736,0.00009090486,0.0013344206,0.0009748605,3.6035897e-7,0.0000689752,0.000013930198,0.000062760686,0.005150432,0.00090550195,0.9905577],"study_design_scores_gemma":[0.0014931269,0.00030455246,0.0009669045,0.0012710715,0.00210353,0.00029585636,0.000014208848,0.000017884226,0.000015199927,0.004847479,0.9885693,0.00010087272],"about_ca_topic_score_codex":0.000025964824,"about_ca_topic_score_gemma":0.000010426625,"teacher_disagreement_score":0.99045676,"about_ca_system_score_codex":0.000056441935,"about_ca_system_score_gemma":0.00010317646,"threshold_uncertainty_score":0.35238335},"labels":[],"label_agreement":null},{"id":"W3034015204","doi":"10.1186/s12889-020-08985-y","title":"Prevalence and predictors of taking tetanus toxoid vaccine in pregnancy: a cross-sectional study of 8,722 women in Sierra Leone","year":2020,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"UNICEF","keywords":"Medicine; Sierra leone; Cross-sectional study; Biostatistics; Public health; Tetanus; Environmental health; Pregnancy; Epidemiology; Toxoid; Pediatrics; Obstetrics; Vaccination; Virology; Nursing; Socioeconomics; Internal medicine; Pathology","score_opus":0.050952809915755244,"score_gpt":0.3142976776597778,"score_spread":0.26334486774402255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034015204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99751705,0.0012527151,0.000016546848,0.00020735571,0.0002878154,0.00060856645,0.00003741969,0.000024274603,0.000048228918],"genre_scores_gemma":[0.9996508,0.00012770822,0.000015563739,0.000028663515,0.000030080797,0.000069735856,0.000010572816,0.00000849392,0.000058404035],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99819833,0.00034935935,0.0007479572,0.00029401632,0.000030588497,0.00037977388],"domain_scores_gemma":[0.9992657,0.00010795099,0.00034278492,0.00015212418,0.000067543464,0.00006394677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078311714,0.000116951225,0.000399886,0.00020917978,0.000061247825,0.000013972651,0.00012315463,0.00011618992,0.00025627515],"category_scores_gemma":[0.00041507004,0.00010750881,0.000024020885,0.00045252152,0.000041475156,0.00018564661,0.00009619616,0.00021585026,0.0000020009454],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014772953,0.00065580604,0.9885482,0.00037460346,0.0000306555,3.6109444e-7,0.0049417857,0.00001016021,0.0045214477,0.000040918807,0.000015487214,0.00071284565],"study_design_scores_gemma":[0.0030651027,0.001364908,0.9945044,0.0000685683,0.0000021792446,0.000008909938,0.000585515,0.000009488639,0.0001091072,0.00000994147,0.00019881687,0.0000730922],"about_ca_topic_score_codex":0.0011543774,"about_ca_topic_score_gemma":0.0010326182,"teacher_disagreement_score":0.005956171,"about_ca_system_score_codex":0.00010371283,"about_ca_system_score_gemma":0.0003545306,"threshold_uncertainty_score":0.4384082},"labels":[],"label_agreement":null},{"id":"W3036032461","doi":"10.28933/ijcr-2020-05-2805","title":"Invasive Haemophilus influenzae disease in Northwestern Ontario First Nations communities: Case Series","year":2020,"lang":"en","type":"article","venue":"International Journal of Case Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Immunization Research Network","keywords":"Haemophilus influenzae; Disease; Meningitis; Pneumonia; Medicine; Pasteurellaceae; Immunology; Pediatrics; Biology; Antibiotics; Microbiology; Pathology; Internal medicine","score_opus":0.025761324421446883,"score_gpt":0.2655098566823078,"score_spread":0.23974853226086093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036032461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588335,0.0002993039,0.000028161265,0.0015356959,0.001899662,0.0001068954,0.000047817644,0.00001453978,0.00018456113],"genre_scores_gemma":[0.9993185,0.00008132725,0.000033922755,0.00020935634,0.00015022888,0.000007928905,0.000051467046,0.000011017747,0.00013626789],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99883944,0.000080541344,0.00079825375,0.00010623918,0.00005001851,0.0001254809],"domain_scores_gemma":[0.9984492,0.00019991722,0.00055770675,0.00013773082,0.0005800084,0.000075411255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014717522,0.0001373791,0.00023409561,0.00027985187,0.00018600824,0.000064836386,0.00010484847,0.00008070644,0.0006597387],"category_scores_gemma":[0.00022428407,0.00012576742,0.00013548769,0.0001134037,0.00007093292,0.0005327605,0.00010279964,0.0003494251,0.000013280598],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050142355,0.00024216853,0.33354512,0.000025261852,0.00050619984,0.65129435,0.011004202,0.00096387166,0.0011245077,0.00012690453,0.00048474382,0.00018126873],"study_design_scores_gemma":[0.0009068793,0.00015780075,0.013810293,0.00012934719,0.00006793699,0.9305468,0.0015040261,0.0000026009827,0.00048851164,0.000110444314,0.052124977,0.00015035635],"about_ca_topic_score_codex":0.032063294,"about_ca_topic_score_gemma":0.6050973,"teacher_disagreement_score":0.573034,"about_ca_system_score_codex":0.00017069423,"about_ca_system_score_gemma":0.0004163599,"threshold_uncertainty_score":0.9743823},"labels":[],"label_agreement":null},{"id":"W3043923685","doi":"10.1155/2020/5931235","title":"A Case of <i>Brevibacillus brevis</i> Meningitis and Bacteremia","year":2020,"lang":"en","type":"article","venue":"Case Reports in Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Bacteremia; Meningitis; Vancomycin; External ventricular drain; Pilocytic astrocytoma; Debulking; Microbiology; Surgery; Internal medicine; Glioma; Antibiotics; Astrocytoma; Staphylococcus aureus; Bacteria; Hydrocephalus; Biology; Cancer","score_opus":0.013169178621619974,"score_gpt":0.2392037808885744,"score_spread":0.22603460226695443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3043923685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99506956,0.0034541613,0.000023984665,0.00004886258,0.0004670837,0.0002601058,0.00009580749,0.00009927428,0.0004811341],"genre_scores_gemma":[0.999572,0.0001824571,0.0000073067463,0.000063738094,0.000063694075,0.000034079145,0.000033289303,0.000016744796,0.000026703794],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99880826,0.0001139754,0.0005307466,0.00033614392,0.0000113632,0.00019948118],"domain_scores_gemma":[0.9992665,0.000120319,0.00024245687,0.00021804533,0.00007751854,0.00007513466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009353965,0.00018040482,0.00040071766,0.00009650597,0.00012526961,0.000022939239,0.000019795874,0.00013028472,0.00047236824],"category_scores_gemma":[0.00034683401,0.00016804031,0.000098719334,0.00022924242,0.00012377901,0.00012947441,0.000081777354,0.0001494337,0.000009042123],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018483523,0.0005693427,0.5174249,0.00077237515,0.00042881953,0.35237503,0.0013128362,0.000027299246,0.08938576,0.0004007309,0.0032144727,0.033903625],"study_design_scores_gemma":[0.0010606152,0.00028245972,0.0048538507,0.00008289432,0.00019683872,0.97832906,0.0001907786,0.0000038818716,0.0041486905,0.00011319593,0.010454685,0.0002830226],"about_ca_topic_score_codex":0.0006202842,"about_ca_topic_score_gemma":0.00010747931,"teacher_disagreement_score":0.6259541,"about_ca_system_score_codex":0.000024759867,"about_ca_system_score_gemma":0.00005542626,"threshold_uncertainty_score":0.6852485},"labels":[],"label_agreement":null},{"id":"W3047120178","doi":"10.1038/s42003-020-01153-3","title":"Genetically detoxified pertussis toxin displays near identical structure to its wild-type and exhibits robust immunogenicity","year":2020,"lang":"en","type":"article","venue":"Communications Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fluidigm (Canada); York University; Sanofi (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada; Sanofi Pasteur; Sanofi","keywords":"Immunogenicity; Pertussis toxin; Bordetella pertussis; Mutant; Chemistry; Pertussis vaccine; Antigen; Biology; Genetics; Biochemistry; Receptor; G protein; Immunization; Gene","score_opus":0.04621486475743707,"score_gpt":0.28457184307207306,"score_spread":0.23835697831463598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047120178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836209,0.004586548,0.00052403286,0.010143668,0.00035587972,0.00031954038,0.00012791115,0.00009534455,0.00022620239],"genre_scores_gemma":[0.99519587,0.00071835687,0.0024541758,0.0011175058,0.000050944458,0.00002180248,0.00032505815,0.000018772742,0.00009753592],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985165,0.00040254378,0.000393274,0.0003618328,0.000011595203,0.00031423863],"domain_scores_gemma":[0.9985501,0.0002149929,0.00007782805,0.00086396054,0.00019882519,0.0000943012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010575636,0.00020531165,0.0003348102,0.000058675625,0.0005857622,0.000051985076,0.0007106952,0.0003852777,0.0007305912],"category_scores_gemma":[0.00057898246,0.00017849277,0.000058402307,0.000381824,0.00034387351,0.000066579756,0.00096633425,0.0003970274,0.00035607527],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013436041,0.00006662093,0.0043290537,0.0000076006077,0.00013371778,2.2035685e-7,0.00035767723,0.00001017993,0.9852712,0.0057025943,0.0011194113,0.0028673243],"study_design_scores_gemma":[0.0039076917,0.0025160867,0.16863376,0.00006942968,0.00050379196,0.0003616073,0.0004439106,0.0015895936,0.15365183,0.0010324348,0.665653,0.0016368879],"about_ca_topic_score_codex":0.00006125757,"about_ca_topic_score_gemma":0.00014555994,"teacher_disagreement_score":0.8316194,"about_ca_system_score_codex":0.000021742782,"about_ca_system_score_gemma":0.000067387315,"threshold_uncertainty_score":0.7999461},"labels":[],"label_agreement":null},{"id":"W3047216808","doi":"10.1080/21645515.2020.1756668","title":"Safety and immunogenicity of a fully-liquid DTaP-IPV-Hib-HepB vaccine (Vaxelis™) in premature infants","year":2020,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Merck","keywords":"Immunogenicity; Medicine; Hib vaccine; Vaccine safety; Virology; Pediatrics; Immunology; Immunization; Immune system","score_opus":0.019055455534552092,"score_gpt":0.2601430146385581,"score_spread":0.241087559104006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047216808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836808,0.013944456,0.00005340092,0.00084748166,0.00044782076,0.0005289782,0.00007686999,0.00011834927,0.00030188274],"genre_scores_gemma":[0.99694914,0.0018802113,0.000057601224,0.00050125876,0.000106317224,0.000018564753,0.00011687882,0.000060277198,0.00030975218],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975982,0.0002497609,0.0011184897,0.000497369,0.000042487918,0.0004937483],"domain_scores_gemma":[0.99869907,0.00013049801,0.0003978785,0.0005539634,0.00017478356,0.000043804237],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031357893,0.00044862652,0.00089478365,0.00019930927,0.00026033702,0.00003761462,0.00040363267,0.0004830719,0.0015788567],"category_scores_gemma":[0.000060986895,0.0004027423,0.0001763637,0.00047012084,0.0000709733,0.0002294181,0.00024148729,0.00058701413,0.0000603549],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043506357,0.00023653418,0.013579947,0.00010694225,0.00044693408,0.0000017948233,0.0016337137,0.000011481438,0.97657996,0.0006725962,0.00023610785,0.0021433365],"study_design_scores_gemma":[0.023056433,0.003109015,0.46312928,0.00039843604,0.00043893434,0.00022517082,0.00070367916,0.000047809495,0.31623572,0.00032205976,0.19079575,0.0015377043],"about_ca_topic_score_codex":0.00039022634,"about_ca_topic_score_gemma":0.00030620262,"teacher_disagreement_score":0.66034424,"about_ca_system_score_codex":0.0000414823,"about_ca_system_score_gemma":0.000057219233,"threshold_uncertainty_score":0.99984246},"labels":[],"label_agreement":null},{"id":"W3047550025","doi":"10.1542/peds.2019-3579","title":"Interference With Pertussis Vaccination in Infants After Maternal Pertussis Vaccination","year":2020,"lang":"en","type":"review","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Diphtheria; Tetanus; Vaccination; Pertussis vaccine; Immunization; Whooping cough; Pediatrics; Pregnancy; Immunology; Antibody","score_opus":0.018866845946400892,"score_gpt":0.2775282389854885,"score_spread":0.25866139303908764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047550025","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002571999,0.99483013,0.00013516165,0.000092590846,0.00128129,0.0005494747,0.00013387336,0.00008907451,0.00031641597],"genre_scores_gemma":[0.015219054,0.9833337,0.00005021739,0.000036065783,0.0003650966,0.00026385215,0.0003110341,0.000055281143,0.00036568937],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99810755,0.00026285785,0.00069113506,0.0005494994,0.000037348353,0.00035163076],"domain_scores_gemma":[0.9989957,0.0001553308,0.00040522814,0.00028496215,0.00011968598,0.000039061186],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016134798,0.0004780683,0.0010940871,0.0006362586,0.00008590031,0.00008192093,0.0002878325,0.0006406713,0.001972659],"category_scores_gemma":[0.00012761993,0.0003433233,0.00019777718,0.0008025804,0.000011239347,0.00024066246,0.00015293408,0.0006646359,0.0005553624],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012250806,0.000097256736,0.006762249,0.0027436547,0.00009754297,0.000012843191,0.00013255687,2.3709156e-7,0.000006805168,0.000025187728,0.00069071294,0.9893084],"study_design_scores_gemma":[0.0007251431,0.00021888381,0.025027426,0.00083555543,0.0007161484,0.00014713984,0.00001170908,0.0000028503828,0.000009473127,0.000013255376,0.9717536,0.0005387972],"about_ca_topic_score_codex":0.00011587855,"about_ca_topic_score_gemma":0.00016666797,"teacher_disagreement_score":0.98876965,"about_ca_system_score_codex":0.00018288485,"about_ca_system_score_gemma":0.00021133738,"threshold_uncertainty_score":0.9999019},"labels":[],"label_agreement":null},{"id":"W3048253297","doi":"10.4049/jimmunol.2000676","title":"Overcoming Waning Immunity in Pertussis Vaccines: Workshop of the National Institute of Allergy and Infectious Diseases","year":2020,"lang":"en","type":"review","venue":"The Journal of Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Medical Research Council; National Institute for Health and Care Research","keywords":"Bordetella pertussis; Immunity; Medicine; Pertussis vaccine; Immunology; Whooping cough; Infectious disease (medical specialty); Virology; Disease; Vaccination; Immunization; Biology; Antibody; Immune system; Pathology","score_opus":0.029358059639148032,"score_gpt":0.28976351038801496,"score_spread":0.2604054507488669,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048253297","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038736757,0.9593327,0.000013948041,0.00018522383,0.0014547853,0.00018252061,0.000028120863,0.0000056286904,0.00006029689],"genre_scores_gemma":[0.08154412,0.9182874,0.0000064119085,0.00001970821,0.000075439806,0.0000047248786,0.000008393888,0.000015773754,0.000038056427],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975955,0.0009797394,0.0011153539,0.00010598058,0.00003472271,0.00016873833],"domain_scores_gemma":[0.9971742,0.0007786738,0.0016046688,0.00020807511,0.00022238442,0.000011972996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046571947,0.00024775584,0.0013961118,0.00028921576,0.00015925562,0.000007897829,0.0005227374,0.0003431111,0.00008630984],"category_scores_gemma":[0.00077503663,0.00013099734,0.00035893626,0.00040945073,0.00030844437,0.00013123923,0.000360114,0.0009904131,0.0000022767974],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012834808,0.0010246077,0.0017520759,0.0027357868,0.016477685,0.0000076900305,0.0030048154,0.00008350877,0.032532208,0.0038077747,0.001071243,0.9362191],"study_design_scores_gemma":[0.0017671026,0.00034480612,0.0058760787,0.0057873214,0.0010591289,0.0023924974,0.00033940203,0.0000010563924,0.00021367094,0.00035501586,0.9816147,0.00024919826],"about_ca_topic_score_codex":0.00016852416,"about_ca_topic_score_gemma":0.00010784673,"teacher_disagreement_score":0.9805435,"about_ca_system_score_codex":0.00008428279,"about_ca_system_score_gemma":0.00040352382,"threshold_uncertainty_score":0.53419167},"labels":[],"label_agreement":null},{"id":"W3068076848","doi":"10.1093/pch/pxaa068.015","title":"16 Variability in lumbar punctures and neuroimaging in infants less than 90 days with acute bacterial meningitis at a provincial children’s hospital in Canada","year":2020,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Lumbar puncture; Bacterial meningitis; Meningitis; Pediatrics; Neuroimaging; Retrospective cohort study; Lumbar; Emergency medicine; Internal medicine; Surgery; Cerebrospinal fluid; Psychiatry","score_opus":0.005161832517436151,"score_gpt":0.20136590083899658,"score_spread":0.19620406832156043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3068076848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99396425,0.00045599075,0.000006895689,0.0036710144,0.00075193227,0.00076229277,0.0003109975,0.000026897944,0.000049732127],"genre_scores_gemma":[0.9985701,0.00044204312,0.000021611442,0.0004418465,0.00024690383,0.000022305136,0.0002309881,0.000021727723,0.000002490832],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979535,0.00038738633,0.0005041961,0.0005437474,0.000040784038,0.0005704372],"domain_scores_gemma":[0.9994444,0.00008855739,0.0001855221,0.00016572831,0.000024581499,0.00009117481],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003627266,0.00025596967,0.00051589427,0.00014937723,0.00017500391,0.000027201802,0.0001392188,0.0001309464,0.000046974135],"category_scores_gemma":[0.00012950842,0.00022351311,0.000028689317,0.00042347526,0.00004559808,0.00014009651,0.0001812997,0.00060006377,0.000002027532],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002738425,0.00008477641,0.99549085,0.000039056114,0.000021713415,0.000012351487,0.0011103278,0.000008727371,0.0005266426,0.000026930253,0.0003150282,0.0020897521],"study_design_scores_gemma":[0.0028082829,0.0002539465,0.9959849,0.000023816721,0.000015701706,0.00006087953,0.00006277848,0.000009243922,0.00013767734,0.000014391453,0.0003985678,0.0002297856],"about_ca_topic_score_codex":0.73632306,"about_ca_topic_score_gemma":0.92562824,"teacher_disagreement_score":0.18930522,"about_ca_system_score_codex":0.0006104527,"about_ca_system_score_gemma":0.0012328459,"threshold_uncertainty_score":0.91146},"labels":[],"label_agreement":null},{"id":"W3081386957","doi":"10.14740/jnr.v0i0.620","title":"Brain Abscess in a Patient With Radiotherapy-Treated Adenoid Cystic Carcinoma: A Misdiagnosis Case Report and Review of the Literature","year":2020,"lang":"en","type":"article","venue":"Journal of Neurology Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Brain abscess; Craniotomy; Adenoid cystic carcinoma; Headaches; Lesion; Surgery; Abscess; Radiology; Carcinoma; Internal medicine","score_opus":0.027338491604651023,"score_gpt":0.3104276609834598,"score_spread":0.2830891693788088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081386957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.927938,0.04644284,9.399959e-7,0.025245208,0.000105075735,0.00024416376,0.000008576561,0.0000023961443,0.000012841274],"genre_scores_gemma":[0.9959187,0.0029722673,0.0000066445664,0.0010199952,0.00004196286,0.00000906313,0.0000020208306,0.000008956413,0.000020391126],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99795294,0.0012132045,0.00044128805,0.00016034151,0.00004245119,0.00018980635],"domain_scores_gemma":[0.9987547,0.00047088633,0.00026172225,0.00016329436,0.00031385393,0.00003555573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064263836,0.0000927221,0.0003543261,0.0001503448,0.000083689425,0.000011123258,0.00013254261,0.00013317198,0.0000742751],"category_scores_gemma":[0.000626803,0.000051084462,0.000061222076,0.00055959687,0.00017479612,0.000056981735,0.0000627016,0.00094598136,8.2109307e-7],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009857006,0.0008998613,0.34360746,0.0032624484,0.0005680008,0.19677864,0.0064875106,0.000014869062,0.40229598,0.00003846858,0.032121927,0.00406783],"study_design_scores_gemma":[0.0031923284,0.0070135817,0.14782193,0.001707009,0.00007133562,0.8151129,0.00009145073,0.0000040928126,0.005852151,0.000017944618,0.018984059,0.0001312043],"about_ca_topic_score_codex":0.000120236604,"about_ca_topic_score_gemma":0.000048728492,"teacher_disagreement_score":0.6183343,"about_ca_system_score_codex":0.000012516603,"about_ca_system_score_gemma":0.000106082975,"threshold_uncertainty_score":0.41098708},"labels":[],"label_agreement":null},{"id":"W3082141561","doi":"10.1371/journal.pone.0238056","title":"Predictive value of repeated cerebrospinal fluid parameters in the outcomes of bacterial meningitis in infants &lt;90 days of age","year":2020,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Western University; Montreal Children's Hospital; McGill University; University of Ottawa; Hospital for Sick Children; Université de Montréal; University of Alberta; SickKids Foundation; University of British Columbia; Centre Hospitalier Universitaire Sainte-Justine; McMaster University","funders":"BC Children's Hospital","keywords":"Medicine; Meningitis; Lumbar puncture; Cerebrospinal fluid; Cohort; Bacterial meningitis; Retrospective cohort study; White blood cell; Cohort study; Pediatrics; Emergency department; Internal medicine","score_opus":0.035286169540250975,"score_gpt":0.23513502056272328,"score_spread":0.1998488510224723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082141561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99904567,0.00006938771,0.0000041466137,0.00014516599,0.00012437388,0.00028536437,0.00015936485,0.000011420154,0.00015511036],"genre_scores_gemma":[0.99969155,0.000040514664,0.00011581111,0.000022200298,0.00001409014,0.000017997556,0.0000777327,0.00000733239,0.000012762925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894994,0.00023397278,0.0004936946,0.00015132903,0.000030133771,0.00014091756],"domain_scores_gemma":[0.9994164,0.00014665331,0.0001971908,0.00017349725,0.00005662118,0.000009608952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000167547,0.00010526604,0.00049067603,0.000091257,0.00001915645,0.0000035668215,0.00015768144,0.000130397,0.0001538006],"category_scores_gemma":[0.00030405435,0.00007961579,0.000061846826,0.00022602617,0.000108110115,0.000065125954,0.000058985956,0.0001432352,0.000003943953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006747376,0.00061789254,0.11267731,0.000046832498,0.00034268055,0.000001350236,0.0021772005,0.0000089603,0.883281,0.000094372925,0.000034072236,0.000043597032],"study_design_scores_gemma":[0.0016431673,0.0008412907,0.44649363,0.00010711897,0.0000870994,0.0000017939128,0.00017780809,0.000016904592,0.5505101,0.000032465723,0.000021025253,0.00006762976],"about_ca_topic_score_codex":0.00057995255,"about_ca_topic_score_gemma":0.00005877537,"teacher_disagreement_score":0.3338163,"about_ca_system_score_codex":0.00001108183,"about_ca_system_score_gemma":0.00002498376,"threshold_uncertainty_score":0.32466376},"labels":[],"label_agreement":null},{"id":"W3086298155","doi":"10.2196/21430","title":"Point-of-Care Approaches for Meningitis Diagnosis in a Low-Resource Setting (Southwestern Uganda): Observational Cohort Study Protocol of the “PI-POC” Trial","year":2020,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Svenska Läkaresällskapet; Knut och Alice Wallenbergs Stiftelse; Svenska Sällskapet för Medicinsk Forskning; Vetenskapsrådet; Stiftelsen för Strategisk Forskning","keywords":"Medicine; Meningitis; Streptococcus pneumoniae; Pediatrics; Etiology; Observational study; Vaccination; Lumbar puncture; Neisseria meningitidis; Intensive care medicine; Immunology; Internal medicine; Cerebrospinal fluid; Antibiotics","score_opus":0.25226143521676303,"score_gpt":0.46140982438421196,"score_spread":0.20914838916744893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086298155","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28670973,0.0000014619998,0.000008113348,0.00033651612,0.000012073139,0.7127577,0.00007025274,0.000018287723,0.00008588323],"genre_scores_gemma":[0.18754639,3.4418377e-8,0.00003861954,0.000010036921,0.00009302861,0.8121907,0.000029267614,0.000020182108,0.00007176575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972419,0.0011323671,0.0007042481,0.0004057975,0.00012730152,0.00038838343],"domain_scores_gemma":[0.99838334,0.0006246321,0.00027626427,0.0003547647,0.00032934846,0.000031653817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013979897,0.00017172813,0.00043137453,0.00012259703,0.00025620472,0.000043485055,0.0004840539,0.00019163762,0.00016911942],"category_scores_gemma":[0.00070314953,0.00012200706,0.00016297108,0.00053628534,0.00017911568,0.00012348118,0.00036263952,0.0004781888,0.0000066536118],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03398175,0.0022232486,0.938873,0.0014290231,0.00014960837,7.272162e-7,0.0050378866,0.000023776467,0.0134190945,0.00019306655,0.0018066316,0.0028622197],"study_design_scores_gemma":[0.14949432,0.01928958,0.5571304,0.0030130534,0.000029980169,0.0000040573773,0.007066889,0.000048876496,0.11586453,0.00017554789,0.14734145,0.00054136646],"about_ca_topic_score_codex":0.000061856765,"about_ca_topic_score_gemma":0.000065714456,"teacher_disagreement_score":0.3817426,"about_ca_system_score_codex":0.000048505648,"about_ca_system_score_gemma":0.00021881633,"threshold_uncertainty_score":0.49753037},"labels":[],"label_agreement":null},{"id":"W3093363459","doi":"10.9778/cmajo.20200060","title":"Pertussis vaccination in pregnancy in Canada: a cost-utility analysis","year":2020,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Ottawa; Women and Children’s Health Research Institute; Stollery Children's Hospital; University of British Columbia; Izaak Walton Killam Health Centre; BC Children's Hospital; Ottawa Public Health; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Vaccination; Cost-effectiveness analysis; Pregnancy; Cost effectiveness; Cost–benefit analysis; Guideline; Quality-adjusted life year; Marginal cost; Economic evaluation; Pediatrics; Immunology; Risk analysis (engineering)","score_opus":0.03565093885674611,"score_gpt":0.27736354505938227,"score_spread":0.24171260620263615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093363459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994812,0.00047533357,0.00005117833,0.0018548408,0.00017855191,0.0005169624,0.00003929274,0.000009839751,0.0020620038],"genre_scores_gemma":[0.99943215,0.000039445327,0.000009282326,0.00016227522,0.0000068165546,0.00007179917,0.000096469725,0.000003826831,0.00017796378],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99926734,0.00013443474,0.00022118665,0.00021561896,0.000007984316,0.0001534109],"domain_scores_gemma":[0.99973196,0.000038024693,0.000049515136,0.00013581738,0.00002721162,0.000017486196],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008826094,0.00007712126,0.00025774274,0.00008012681,0.000045095185,0.00002099841,0.00020737897,0.00006790165,0.0034552014],"category_scores_gemma":[0.00007924325,0.000069477326,0.000033406865,0.0006817467,0.000005246683,0.00013525365,0.0001297461,0.00012625824,0.000034579316],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086943575,0.00006452192,0.96178716,0.000009597875,0.00012992915,0.0000031052582,0.00039846462,0.000029422312,0.0046479856,0.000069192174,0.0014054737,0.03136821],"study_design_scores_gemma":[0.0008374625,0.000020639696,0.9878414,0.00001570899,0.000041234467,8.955594e-7,0.00017848141,0.00012709967,0.0018166419,0.000012683301,0.009020061,0.00008766985],"about_ca_topic_score_codex":0.93416536,"about_ca_topic_score_gemma":0.9900943,"teacher_disagreement_score":0.05592895,"about_ca_system_score_codex":0.00014944912,"about_ca_system_score_gemma":0.00028118055,"threshold_uncertainty_score":0.9974558},"labels":[],"label_agreement":null},{"id":"W3093745608","doi":"10.14745/ccdr.v46i10a05","title":"Paediatric Investigators Collaborative Network on Infections in Canada (PICNIC) study of the current landscape of invasive meningococcal disease in children","year":2020,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Dalhousie University; Queen's University; McMaster University; University of Ottawa; McGill University; Western University; University of Manitoba; University of Alberta","funders":"","keywords":"Medicine; Meningitis; Meningococcal disease; Incidence (geometry); Pediatrics; Bacteremia; Subdural empyema; Antibiotics; Picnic; Emergency medicine; Neisseria meningitidis","score_opus":0.010948111241739202,"score_gpt":0.21805135456273306,"score_spread":0.20710324332099386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093745608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956081,0.002498668,1.2092478e-7,0.00042482797,0.00042744298,0.00077642704,0.00019707685,0.00000707905,0.00006025696],"genre_scores_gemma":[0.9995339,0.00011902312,7.1049686e-7,0.000087678396,0.000027330927,0.00008888791,0.00012482064,0.000010999113,0.000006665121],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982784,0.00056930486,0.00063004764,0.00022388803,0.00006558139,0.00023279495],"domain_scores_gemma":[0.99851626,0.00020811279,0.00036435336,0.00064863934,0.00011844798,0.00014418576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013154079,0.00016902594,0.0003917867,0.00006118353,0.0001487009,0.00000546108,0.00031394983,0.000032764514,0.000046040863],"category_scores_gemma":[0.0006547254,0.0001371232,0.000049785325,0.0010817023,0.000060466344,0.000043316675,0.0002524127,0.00040980228,3.3140617e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012430409,0.0003531484,0.98668355,0.0000221612,0.00009529636,0.000015581632,0.00011474603,0.007752265,0.000048123267,0.000026280224,0.0046722153,0.000092336224],"study_design_scores_gemma":[0.0010811338,0.0000799334,0.9958951,0.00007675967,0.000085123436,0.0000030962694,0.00037572172,0.000023273078,0.000058282374,0.0000144679025,0.0021719562,0.00013517974],"about_ca_topic_score_codex":0.9757064,"about_ca_topic_score_gemma":0.99777937,"teacher_disagreement_score":0.02207297,"about_ca_system_score_codex":0.00028198742,"about_ca_system_score_gemma":0.013612223,"threshold_uncertainty_score":0.99197966},"labels":[],"label_agreement":null},{"id":"W3094904550","doi":"10.1128/aac.00254-20","title":"Sodium Tetraphenylborate Displays Selective Bactericidal Activity against Neisseria meningitidis and N. gonorrhoeae and Is Effective at Reducing Bacterial Infection Load","year":2020,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Réseau Québécois de Recherche sur les Médicaments; Agence Universitaire de la Francophonie; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Neisseria gonorrhoeae; Neisseria meningitidis; Microbiology; Neisseriaceae; Biology; Antibiotics; Human pathogen; Virology; Bacteria; Genetics","score_opus":0.009931058553743585,"score_gpt":0.22957555653947598,"score_spread":0.21964449798573238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094904550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99702257,0.00007693535,0.000036629277,0.0014304126,0.0005985237,0.00049284304,0.00011266433,0.000083202605,0.00014622153],"genre_scores_gemma":[0.9965044,0.0016177971,0.000027933675,0.001380299,0.00020591947,0.000018705277,0.000069428825,0.000039661514,0.00013584594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862176,0.00013156403,0.00023335328,0.0006331883,0.000015117472,0.00036501174],"domain_scores_gemma":[0.9994974,0.000049224087,0.00016838936,0.00012263804,0.00007809605,0.000084259686],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009911923,0.00037403632,0.00045458393,0.000060699276,0.0005628021,0.00013453912,0.00005712787,0.00027833585,0.00026919536],"category_scores_gemma":[0.000018349658,0.00034108805,0.00007735327,0.00018492756,0.00017438548,0.00031662293,0.00012213195,0.0002410145,0.000019332389],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014131536,0.00009480915,0.026411226,0.000056844827,0.00031255,7.4978306e-7,0.0026319115,5.0461495e-7,0.9506497,0.0000037193533,0.004968016,0.01345683],"study_design_scores_gemma":[0.0042249924,0.0005940152,0.37828624,0.0000565307,0.00009523408,0.00008460204,0.000043215252,0.000035975634,0.5770777,0.000007488161,0.038981277,0.0005127276],"about_ca_topic_score_codex":0.00059422094,"about_ca_topic_score_gemma":0.000058035494,"teacher_disagreement_score":0.373572,"about_ca_system_score_codex":0.00006534927,"about_ca_system_score_gemma":0.00003418153,"threshold_uncertainty_score":0.9999041},"labels":[],"label_agreement":null},{"id":"W3095916653","doi":"10.3390/microorganisms8111681","title":"Why the Anti-Meningococcal B Vaccination during Adolescence Should Be Implemented in Italy: An Overview of Available Evidence","year":2020,"lang":"en","type":"review","venue":"Microorganisms","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Pfizer","keywords":"Sequela; Meningococcal disease; Medicine; Vaccination; Neisseria meningitidis; Public health; Incidence (geometry); Pediatrics; Epidemiology; Meningococcal vaccine; Disease; Environmental health; Disease burden; Immunology; Immunization; Psychiatry; Internal medicine; Pathology","score_opus":0.18217481947185932,"score_gpt":0.3698881195846864,"score_spread":0.1877133001128271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095916653","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007562718,0.9905074,0.0000117627105,0.00030640163,0.00050277385,0.0009151997,0.000113932074,0.00006174217,0.00001806896],"genre_scores_gemma":[0.0040680305,0.99517846,0.000026072872,0.00014516844,0.00007830443,0.00005830515,0.00022996574,0.000056236066,0.00015945752],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975001,0.000578092,0.0009374316,0.0005649255,0.000033535336,0.00038586438],"domain_scores_gemma":[0.9986621,0.0001453378,0.0005197978,0.0005473279,0.00009730749,0.000028087434],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042521712,0.00043002277,0.0013285816,0.00018950232,0.00020363569,0.000051754963,0.0006255641,0.0004407727,0.003226692],"category_scores_gemma":[0.00011154545,0.00030992055,0.00025090517,0.00070850353,0.000054973774,0.0002644484,0.00032471548,0.0006454735,0.00022234367],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005290724,0.00036275035,0.000628513,0.012412964,0.00041048814,0.0000096295225,0.0005933419,4.854434e-7,0.86163116,0.00020020193,0.007847769,0.11584976],"study_design_scores_gemma":[0.00043195538,0.00014163177,0.00080617575,0.0056541828,0.00034064185,0.00014754168,0.00004941501,2.9572462e-7,0.025621053,0.0000059409103,0.96645886,0.00034230572],"about_ca_topic_score_codex":0.00047347482,"about_ca_topic_score_gemma":0.00023217512,"teacher_disagreement_score":0.9586111,"about_ca_system_score_codex":0.00012433133,"about_ca_system_score_gemma":0.00018785712,"threshold_uncertainty_score":0.99993527},"labels":[],"label_agreement":null},{"id":"W3100990027","doi":"10.1016/s1473-3099(20)30474-6","title":"Validating clinical practice guidelines for the management of children with non-blanching rashes in the UK (PiC): a prospective, multicentre cohort study","year":2020,"lang":"en","type":"article","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Public Health Agency; Queen's University Belfast","keywords":"Medicine; Pediatrics; Rash; Guideline; Prospective cohort study; Cohort; Internal medicine","score_opus":0.05186310761932506,"score_gpt":0.36851304720823147,"score_spread":0.3166499395889064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3100990027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991908,0.00051215733,0.00036334002,0.003033369,0.00027335942,0.0035033652,0.000050738872,0.000065757944,0.0002899239],"genre_scores_gemma":[0.9973502,0.00023975407,0.000114256836,0.0013099455,0.00045083874,0.00048433052,0.000022423785,0.000014573716,0.000013677886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986132,0.00039372267,0.00044965246,0.00026994635,0.000045891793,0.00022762135],"domain_scores_gemma":[0.9979213,0.001128673,0.0002866197,0.00040194526,0.00024724842,0.000014251634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009449657,0.00016741669,0.00036795143,0.000019662879,0.0003851735,0.000056962428,0.0003467352,0.000044142776,0.000030330306],"category_scores_gemma":[0.00086561544,0.00007350606,0.000098144475,0.00023314997,0.00009506833,0.000090180314,0.00010938421,0.0002423475,0.00000930738],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061717886,0.0005657212,0.9913039,0.000029668008,0.0016093284,0.000001305973,0.00078524364,0.00022168634,0.00006891359,0.00013559502,0.0026146616,0.002046779],"study_design_scores_gemma":[0.0039965664,0.0005245697,0.9892496,0.000044229433,0.0011316495,0.00002183372,0.0033159656,0.00004503803,0.000040333718,0.000036637433,0.0014814175,0.00011215534],"about_ca_topic_score_codex":0.0004025993,"about_ca_topic_score_gemma":0.00020128347,"teacher_disagreement_score":0.005442211,"about_ca_system_score_codex":0.000014139202,"about_ca_system_score_gemma":0.000027169905,"threshold_uncertainty_score":0.29974902},"labels":[],"label_agreement":null},{"id":"W3105842719","doi":"10.15252/msb.20209888","title":"Gene expression profiling reveals insights into infant immunological and febrile responses to group B meningococcal vaccine","year":2020,"lang":"en","type":"article","venue":"Molecular Systems Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Medical Research Council; European Commission; NIHR Oxford Biomedical Research Centre; University of Oxford; National Institute for Health and Care Research; UK Research and Innovation; FP7 Ideas: European Research Council; Wellcome Trust; GlaxoSmithKline","keywords":"Reactogenicity; Vaccination; Immunogenicity; Meningococcal vaccine; Neisseria meningitidis; Immunology; Biology; Gene expression profiling; Medicine; Gene expression; Immunization; Immune system; Gene; Genetics","score_opus":0.015464788117079067,"score_gpt":0.2542413682925274,"score_spread":0.23877658017544834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3105842719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98174345,0.0114076,0.0046006823,0.00053272594,0.0008336915,0.0006731135,0.000016920876,0.0001473158,0.000044487595],"genre_scores_gemma":[0.99846935,0.00009324326,0.0006018864,0.00033206333,0.00012543176,0.00016730645,0.00013343438,0.000021962056,0.00005534505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977057,0.00085558963,0.000486231,0.0005908904,0.000015668611,0.0003458981],"domain_scores_gemma":[0.99928886,0.00010357245,0.00017066808,0.00027545632,0.00008035493,0.00008106182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021796318,0.0002626561,0.00055456284,0.00013408945,0.00022840123,0.00003364483,0.00018833381,0.000475704,0.000055258835],"category_scores_gemma":[0.00035880905,0.00019576089,0.00007028179,0.0002040706,0.00005023537,0.000054556906,0.00035298395,0.00024534378,0.00014212771],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060542277,0.000034261284,0.005576063,0.00002925715,0.00009242593,0.000010857836,0.000325132,0.0000033640727,0.9909292,0.001661097,0.00024697479,0.00048594197],"study_design_scores_gemma":[0.0013668087,0.0016640808,0.006026612,0.00006500911,0.000032783373,0.00018433479,0.00015093214,0.000016297183,0.94753975,0.00009720897,0.042486623,0.0003695424],"about_ca_topic_score_codex":0.00021415086,"about_ca_topic_score_gemma":0.0000044386875,"teacher_disagreement_score":0.043389436,"about_ca_system_score_codex":0.000025387226,"about_ca_system_score_gemma":0.000020196561,"threshold_uncertainty_score":0.7982897},"labels":[],"label_agreement":null},{"id":"W3106021010","doi":"10.1186/s12889-020-09854-4","title":"Revisiting the epidemiology of pertussis in Canada, 1924–2015: a literature review, evidence synthesis, and modeling study","year":2020,"lang":"en","type":"review","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University of Guelph; Sanofi (Canada); York University; University of Guelph-Humber; Thompson Rivers University","funders":"","keywords":"Epidemiology; Medicine; Incidence (geometry); Biostatistics; Whooping cough; Public health; Demography; Bordetella pertussis; Pertussis vaccine; Pediatrics; Vaccination; Immunology; Immunization; Pathology","score_opus":0.14603190916087525,"score_gpt":0.3925984705374601,"score_spread":0.24656656137658486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106021010","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023506372,0.98931926,0.000032031985,0.0084226485,0.0003371795,0.0015359335,0.00009441692,0.00001623997,0.000007238877],"genre_scores_gemma":[0.0020313691,0.9967954,0.000040995783,0.00060159765,0.00015291624,0.00027771515,0.00005753031,0.000024456609,0.000018002165],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98902905,0.007834584,0.0019609022,0.0005897527,0.000030222482,0.0005554899],"domain_scores_gemma":[0.99408257,0.0041900286,0.0009784221,0.00054617756,0.00011855894,0.000084253945],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.006019098,0.00037653962,0.0033386077,0.00016544743,0.00020350293,0.000015967882,0.00040678162,0.00025002795,0.00006112139],"category_scores_gemma":[0.009557262,0.00022110228,0.00019711719,0.0007254654,0.000041759955,0.000114309754,0.00021678711,0.00093915506,0.0000057300454],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006969404,0.00003595019,0.00437755,0.06084614,0.00016032055,0.0000022524407,0.00019358557,5.723534e-7,3.7377794e-7,0.00010040044,0.0015020085,0.9327739],"study_design_scores_gemma":[0.000111625326,0.00007206578,0.00084569555,0.10404599,0.00020940683,0.00020887241,0.00020791557,0.000031849013,2.3677497e-8,0.0000028530746,0.8940402,0.00022347024],"about_ca_topic_score_codex":0.35209945,"about_ca_topic_score_gemma":0.23594812,"teacher_disagreement_score":0.93255043,"about_ca_system_score_codex":0.00041257488,"about_ca_system_score_gemma":0.0068093673,"threshold_uncertainty_score":0.9988211},"labels":[],"label_agreement":null},{"id":"W3106530627","doi":"10.31631/2073-3046-2020-19-5-84-92","title":"Estimation of the Potential Benefits of Meningococcal Vaccination in Children at 9 and 12 Months of Age Using a Predictive Mathematical Model","year":2020,"lang":"en","type":"article","venue":"Epidemiology and Vaccinal Prevention","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Health Economics","funders":"","keywords":"Vaccination; Epidemiology; Medicine; Meningococcal disease; Immunization; Population; Pediatrics; Disease burden; Vaccination schedule; Disease; Demography; Cohort; Vaccination policy; Estimation; Environmental health; Immunology; Neisseria meningitidis; Internal medicine","score_opus":0.035788112105677276,"score_gpt":0.2933391578435229,"score_spread":0.2575510457378456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106530627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98273057,0.00057779974,0.01611312,0.00014613656,0.00005037362,0.00033310673,0.00002388894,0.0000061783294,0.000018818291],"genre_scores_gemma":[0.9990685,0.00007603006,0.00077219406,0.000010127253,0.00001270001,0.0000073796814,0.000027852426,0.000004804022,0.000020443178],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998725,0.0004189559,0.0005584637,0.00017138939,0.000012768381,0.000113417445],"domain_scores_gemma":[0.9993283,0.00014109576,0.0003991442,0.00008367947,0.000033167235,0.000014593338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005406647,0.000097031356,0.00038891754,0.00006161427,0.00007299343,9.714969e-7,0.000057622216,0.00020573144,0.000051147865],"category_scores_gemma":[0.00035916106,0.0000737552,0.000070840164,0.00007742963,0.00007479329,0.00009384576,0.000114579925,0.00012527108,4.625625e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019654352,0.00043004213,0.44630057,0.0003642544,0.00041859882,1.4551907e-7,0.0016376986,0.10562748,0.41575298,0.011679093,0.00007751196,0.015746186],"study_design_scores_gemma":[0.0013021794,0.0002920682,0.8728838,0.0000849468,0.00013723089,0.000038097427,0.000034733508,0.104774766,0.009803109,0.010584248,6.5705035e-7,0.0000641456],"about_ca_topic_score_codex":0.000060913662,"about_ca_topic_score_gemma":0.000015424244,"teacher_disagreement_score":0.42658326,"about_ca_system_score_codex":0.000013077287,"about_ca_system_score_gemma":0.000014869725,"threshold_uncertainty_score":0.300765},"labels":[],"label_agreement":null},{"id":"W3107100387","doi":"10.3390/ijms21238899","title":"A Budding Relationship: Bacterial Extracellular Vesicles in the Microbiota-Gut-Brain Axis","year":2020,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Biology; Vesicle; Gut–brain axis; Biogenesis; Gut flora; Cell biology; Neuroscience; Immunology; Biochemistry; Membrane","score_opus":0.04531516485979427,"score_gpt":0.3294426891983876,"score_spread":0.28412752433859334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107100387","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014063844,0.9801544,0.00016102563,0.0017331277,0.0035021082,0.00018107997,0.000030254067,0.000007698465,0.00016645786],"genre_scores_gemma":[0.040407628,0.95820576,0.0003624043,0.00016604862,0.0006261971,0.000014545787,0.00006623164,0.000024032228,0.00012713263],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997865,0.0007304173,0.00088722573,0.00023016165,0.00010070153,0.00018649483],"domain_scores_gemma":[0.9984457,0.00045904153,0.0008204219,0.00011914163,0.00013624535,0.00001944748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012325195,0.00022126317,0.00059152074,0.00046866795,0.0001358065,0.00022028969,0.0013585436,0.00022348022,0.00019406737],"category_scores_gemma":[0.00049020036,0.0001384393,0.00044007547,0.00043668944,0.00019738637,0.00021410627,0.000106715575,0.0005938647,0.00005371211],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009475137,0.00035802845,0.00010512686,0.00032209934,0.0010629704,0.00048321698,0.0010563659,0.000019454266,0.23007123,0.011149386,0.004461787,0.7508156],"study_design_scores_gemma":[0.000307556,0.00012453926,0.00007624914,0.001245085,0.000099620825,0.0019680941,0.00011395089,5.57119e-7,0.00032315525,0.00012618827,0.9954679,0.00014711796],"about_ca_topic_score_codex":0.00002447822,"about_ca_topic_score_gemma":0.0000041135704,"teacher_disagreement_score":0.9910061,"about_ca_system_score_codex":0.00007307158,"about_ca_system_score_gemma":0.0003557959,"threshold_uncertainty_score":0.5645391},"labels":[],"label_agreement":null},{"id":"W3108215055","doi":"10.1016/j.vaccine.2020.11.053","title":"A model for the incremental burden of invasive Haemophilus influenzae type b due to a decline of childhood vaccination during the COVID-19 outbreak: A dynamic transmission model in Japan","year":2020,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Vaccination; Medicine; Outbreak; Transmission (telecommunications); Incidence (geometry); Pediatrics; Disease burden; Carriage; Disease; Hib vaccine; Immunology; Virology; Immunization; Internal medicine; Conjugate vaccine","score_opus":0.026126758945918812,"score_gpt":0.2798208648368158,"score_spread":0.25369410589089697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108215055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805313,0.0004372199,0.007909499,0.009856711,0.000071324175,0.0010499309,0.00011266394,0.000024780553,0.0000065672357],"genre_scores_gemma":[0.99880403,0.00010177129,0.00021199843,0.0006757037,0.000029866816,0.000050129067,0.00005629972,0.00001842703,0.000051788324],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99903876,0.000064513675,0.0004650666,0.00022103974,0.00002713772,0.00018351195],"domain_scores_gemma":[0.9992865,0.00018421601,0.00016375534,0.00021413024,0.0001123787,0.000039048235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022045866,0.00015703704,0.00032153947,0.00011883303,0.00015450758,0.000007234348,0.00026951436,0.00012388089,0.00008485754],"category_scores_gemma":[0.00030166045,0.00009858688,0.00009171832,0.0003410562,0.00000901312,0.00007582172,0.0001384894,0.0001525079,0.000004458244],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018666418,0.00013180413,0.0013016645,0.00012442897,0.00012260405,2.6442947e-7,0.0071711033,0.12831384,0.8590864,0.00011306393,0.00020212057,0.0015660869],"study_design_scores_gemma":[0.026336487,0.0020225064,0.1267566,0.00020343525,0.00047458842,0.0001419972,0.0021695208,0.68890333,0.14881448,0.0016690989,0.0017792566,0.00072871277],"about_ca_topic_score_codex":0.0006761539,"about_ca_topic_score_gemma":0.0007986368,"teacher_disagreement_score":0.7102719,"about_ca_system_score_codex":0.000053438172,"about_ca_system_score_gemma":0.00014587717,"threshold_uncertainty_score":0.40202564},"labels":[],"label_agreement":null},{"id":"W3110446672","doi":"10.1016/j.bjane.2020.09.008","title":"Is Bordetella pertussis co-infecting SARS-CoV-2 patients?","year":2020,"lang":"en","type":"letter","venue":"Brazilian Journal of Anesthesiology (English Edition)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Bordetella pertussis; Virology; Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Microbiology; Coronavirus disease 2019 (COVID-19); Biology; Bacteria; Genetics; Pathology; Infectious disease (medical specialty)","score_opus":0.018257555846779808,"score_gpt":0.25573034470759276,"score_spread":0.23747278886081297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110446672","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68104887,0.0013016888,0.000025528152,0.28166032,0.032364957,0.00068942853,0.0006462824,0.0002450238,0.002017905],"genre_scores_gemma":[0.14788146,0.00067566655,0.00018138374,0.7965038,0.04918568,0.000043755143,0.0037499613,0.0003212948,0.0014570396],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.996277,0.0008703007,0.0014631066,0.00058379275,0.000090181755,0.0007156258],"domain_scores_gemma":[0.9956196,0.0006977399,0.0017610365,0.00042198686,0.0014423828,0.000057284495],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00032288852,0.00068611023,0.001462057,0.00053948094,0.00048399754,0.00009091771,0.0006630806,0.002177548,0.0022186572],"category_scores_gemma":[0.001099579,0.0005842085,0.00081151817,0.00028262625,0.0004083632,0.0004322775,0.00007532161,0.0038322029,0.0007516727],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017759379,0.00014171704,0.00864979,0.00008656791,0.0005409459,0.00020308803,0.00043951368,2.6279156e-7,0.0058192173,0.0000051739485,0.9825797,0.0013564323],"study_design_scores_gemma":[0.0016662362,0.0018092246,0.0066080596,0.0001815908,0.00032326725,0.00096583687,0.00007393079,2.1936212e-7,0.0151033625,0.00016626892,0.97254086,0.0005611591],"about_ca_topic_score_codex":0.000014629357,"about_ca_topic_score_gemma":0.0000023777823,"teacher_disagreement_score":0.5331674,"about_ca_system_score_codex":0.00010549115,"about_ca_system_score_gemma":0.0002733417,"threshold_uncertainty_score":0.9996609},"labels":[],"label_agreement":null},{"id":"W3111714631","doi":"10.1371/journal.pone.0242502","title":"Timeliness of immunisation with the pentavalent vaccine at different levels of the health care system in the Lao People’s Democratic Republic: A cross-sectional study","year":2020,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Agence Universitaire de la Francophonie","keywords":"Medicine; Vaccination; Vaccine-preventable diseases; Immunization; Cross-sectional study; Pediatrics; Diphtheria; Logistic regression; Poliomyelitis; Herd immunity; Measles; Tetanus; Hepatitis B; Environmental health; Family medicine; Immunology; Internal medicine","score_opus":0.05163925974870199,"score_gpt":0.2670146780687014,"score_spread":0.2153754183199994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111714631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99658746,0.00039206387,0.000013725819,0.0017196224,0.00010702906,0.0010775874,0.00006824892,0.000016206239,0.000018051413],"genre_scores_gemma":[0.99964285,0.000007917258,0.0000037354355,0.0000794422,0.00003784402,0.000079792306,0.00003564708,0.000008761462,0.000104022045],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984987,0.00071913184,0.00042273983,0.00015957528,0.00006949058,0.00013038122],"domain_scores_gemma":[0.9989853,0.00016856358,0.00030597812,0.00034067934,0.00019020824,0.00000926136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033581952,0.00011624844,0.0003163205,0.000032183267,0.00030053014,0.000016161728,0.0002634628,0.000052856383,0.00012700903],"category_scores_gemma":[0.000051359184,0.000050275852,0.00005331339,0.00023191186,0.000036623125,0.000041724255,0.00011671397,0.00018570074,0.000005305113],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005651445,0.0015236627,0.91673815,0.0003321084,0.0004147005,1.15468225e-7,0.012888935,0.000018719462,0.06724828,0.00013436348,0.000081737104,0.000054102984],"study_design_scores_gemma":[0.001371733,0.0008255904,0.9856308,0.00006958013,0.00008445326,0.000009464822,0.005354501,0.000013241293,0.0065727592,0.0000019854501,0.000012908392,0.000052969997],"about_ca_topic_score_codex":0.00056244584,"about_ca_topic_score_gemma":0.0024020353,"teacher_disagreement_score":0.06889268,"about_ca_system_score_codex":0.000079252284,"about_ca_system_score_gemma":0.00005186416,"threshold_uncertainty_score":0.23114653},"labels":[],"label_agreement":null},{"id":"W3112214620","doi":"10.1016/j.ijantimicag.2020.106258","title":"Pharmacotherapy for Bordetella pertussis infection. I. A synthesis of laboratory sciences","year":2020,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Etest; Bordetella pertussis; Antibiotics; Medicine; Drug resistance; Intensive care medicine; Antibiotic resistance; Microbiology; Biology; Bacteria","score_opus":0.052454241792824596,"score_gpt":0.37513177816822113,"score_spread":0.32267753637539653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112214620","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002357711,0.9836978,0.00020126771,0.00042420666,0.011606171,0.00042098342,0.001190358,0.000019882957,0.00008166453],"genre_scores_gemma":[0.0012241714,0.99768984,0.00020542479,0.00010234366,0.0006311122,0.000010848495,0.000029648894,0.000028400087,0.00007822325],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99836874,0.00019869981,0.0010130851,0.0002018861,0.000054469707,0.00016311536],"domain_scores_gemma":[0.99740106,0.00030564406,0.0015148231,0.00007527045,0.0006757745,0.000027425702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000341278,0.0002585869,0.0010981294,0.0004923838,0.00010715074,0.000052509862,0.00057151966,0.00024156069,0.0005485094],"category_scores_gemma":[0.00022577251,0.00017559911,0.00084018067,0.00024140194,0.00014269094,0.0001623715,0.000065748805,0.00025134004,0.00003773335],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021741829,0.0003788729,0.00006561035,0.0011208511,0.0041503496,0.0000070847,0.000057078207,0.0000044930594,0.029250722,0.00004028131,0.036354475,0.9283528],"study_design_scores_gemma":[0.0005690081,0.00015403939,0.000008385868,0.0028001713,0.00059921626,0.0002426123,0.0000036023002,6.476932e-7,0.0134336995,0.0000045397383,0.9820205,0.00016356084],"about_ca_topic_score_codex":0.00003107019,"about_ca_topic_score_gemma":0.0000021072758,"teacher_disagreement_score":0.945666,"about_ca_system_score_codex":0.00007860317,"about_ca_system_score_gemma":0.0004972421,"threshold_uncertainty_score":0.7160724},"labels":[],"label_agreement":null},{"id":"W3112776677","doi":"10.1542/peds.2020-1571","title":"Invasive Bacterial Infections in Afebrile Infants Diagnosed With Acute Otitis Media","year":2020,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Alberta; University of Calgary","funders":"","keywords":"Medicine; Bacteremia; Meningitis; Sepsis; Otitis; Confidence interval; Pediatrics; Blood culture; Adverse effect; Internal medicine; Emergency department; Antibiotics; Surgery","score_opus":0.011735529402296638,"score_gpt":0.2208313990129178,"score_spread":0.20909586961062115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112776677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966895,0.000211862,0.00005406135,0.00041270387,0.0017506741,0.00021370401,0.00018837312,0.00010375253,0.00037534718],"genre_scores_gemma":[0.99760824,0.0011214315,0.000055198758,0.0001520587,0.0006626892,0.00004815342,0.00029189282,0.000019690953,0.000040611467],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99911916,0.00008490243,0.00024441563,0.00025629535,0.000019019932,0.00027622044],"domain_scores_gemma":[0.99939257,0.00025796445,0.000094258394,0.0001343247,0.000071342925,0.000049512186],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000057309688,0.00016417076,0.00025507575,0.0001452911,0.00010919413,0.000031468873,0.00010975972,0.00020239923,0.0016885607],"category_scores_gemma":[0.00030463954,0.00014302203,0.00004898395,0.0006230787,0.000049153008,0.00018463717,0.00007587274,0.0002668169,0.0004625853],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082753965,0.0006031384,0.80610466,0.000070011934,0.00028599176,0.0001700783,0.0040733977,0.000075488024,0.15239349,0.00041932118,0.032593567,0.0023832994],"study_design_scores_gemma":[0.017635504,0.0026600396,0.84679246,0.000050614402,0.00075696025,0.0006212706,0.0006225765,0.000009978031,0.01972898,0.00021238871,0.1093381,0.0015711018],"about_ca_topic_score_codex":0.0004358316,"about_ca_topic_score_gemma":0.0015611928,"teacher_disagreement_score":0.1326645,"about_ca_system_score_codex":0.000026409132,"about_ca_system_score_gemma":0.00014353041,"threshold_uncertainty_score":0.999224},"labels":[],"label_agreement":null},{"id":"W3112788061","doi":"10.1186/s12889-020-09946-1","title":"Systematic literature review of the impact and effectiveness of monovalent meningococcal C conjugated vaccines when used in routine immunization programs","year":2020,"lang":"en","type":"review","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Pfizer","keywords":"Medicine; Vaccination; Meningococcal vaccine; Immunization; Herd immunity; Meningococcal disease; Systematic review; Pediatrics; Incidence (geometry); Population; Public health; Family medicine; Conjugate vaccine; MEDLINE; Environmental health; Neisseria meningitidis; Immunology","score_opus":0.04287784716454164,"score_gpt":0.34269681975815125,"score_spread":0.2998189725936096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112788061","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021495847,0.9919071,0.000030229745,0.00012085908,0.00027316465,0.005393832,0.00009169117,0.000028583258,0.000004924313],"genre_scores_gemma":[0.004799428,0.99402803,0.000015497953,0.000012671524,0.000019996533,0.00030159065,0.0007835515,0.00002823847,0.000010978316],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9919155,0.0058748964,0.0015963432,0.00029547384,0.000031838226,0.00028592825],"domain_scores_gemma":[0.99731207,0.00045622952,0.0014945092,0.00045721533,0.00023570095,0.000044269524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027235628,0.00035733433,0.003255058,0.00020628952,0.000071249284,0.000031989886,0.00027745464,0.00034896776,0.00002474432],"category_scores_gemma":[0.0007714181,0.00019122612,0.00036072094,0.001177206,0.00004764561,0.00010176401,0.00014728135,0.00042259778,0.0000025464765],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017517455,0.00015984713,0.0016602597,0.9750576,0.0003111856,1.6611759e-7,0.00019792409,7.125489e-8,0.00004951982,0.00015276224,0.000035050554,0.022358073],"study_design_scores_gemma":[0.000961974,0.00037346542,0.0027188659,0.955781,0.0002523794,0.00016488177,0.000020726216,0.000002686448,0.000009257352,0.000007067709,0.039509088,0.0001986416],"about_ca_topic_score_codex":0.00026038717,"about_ca_topic_score_gemma":0.000028448743,"teacher_disagreement_score":0.039474037,"about_ca_system_score_codex":0.00016730947,"about_ca_system_score_gemma":0.00095495646,"threshold_uncertainty_score":0.7797975},"labels":[],"label_agreement":null},{"id":"W3113207127","doi":"10.1016/j.ijantimicag.2020.106257","title":"Pharmacotherapy for Bordetella pertussis infection. II. A synthesis of clinical sciences","year":2020,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Bordetella pertussis; Medicine; Antibiotics; Trimethoprim; Intensive care medicine; Macrolide Antibiotics; Clinical trial; Sulfamethoxazole; Internal medicine; Erythromycin; Microbiology; Biology; Bacteria","score_opus":0.12946599595657807,"score_gpt":0.4568888699455237,"score_spread":0.32742287398894565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113207127","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007237908,0.96293974,0.0002859126,0.00086739345,0.02695911,0.00064043,0.000829072,0.000026684302,0.00021374674],"genre_scores_gemma":[0.0018069454,0.99635285,0.00029867576,0.00012093639,0.0011653338,0.000008867697,0.00003169838,0.000027395703,0.00018728936],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973277,0.0002939387,0.0018910343,0.0002508285,0.000060778606,0.00017573568],"domain_scores_gemma":[0.9964389,0.0005611431,0.0022968382,0.0000869354,0.00058010715,0.000036068544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007145258,0.00027041064,0.0016122195,0.00041737777,0.00015844684,0.000043463508,0.0006770042,0.0003390416,0.0006610616],"category_scores_gemma":[0.0005077073,0.00017737244,0.001641726,0.00018595275,0.00019439361,0.00014906198,0.00012227282,0.0003681198,0.00003499773],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024924945,0.0004732863,0.00012284484,0.00048249724,0.003528613,0.0000044502412,0.000029322126,0.000002120072,0.0022610629,0.00002914014,0.03053766,0.96227974],"study_design_scores_gemma":[0.0008747223,0.00034625392,0.000027410077,0.0028537856,0.00076966593,0.00039719953,0.0000026035384,0.0000013184246,0.0024834864,0.000007179748,0.992068,0.00016838995],"about_ca_topic_score_codex":0.000039012713,"about_ca_topic_score_gemma":0.0000026506284,"teacher_disagreement_score":0.96211135,"about_ca_system_score_codex":0.000048233742,"about_ca_system_score_gemma":0.00051116396,"threshold_uncertainty_score":0.72381616},"labels":[],"label_agreement":null},{"id":"W3115055834","doi":"10.1016/j.csbj.2020.12.023","title":"Structure and compositional analysis of aluminum oxyhydroxide adsorbed pertussis vaccine","year":2020,"lang":"en","type":"article","venue":"Computational and Structural Biotechnology Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Sanofi (Canada); York University","funders":"Sanofi Pasteur; Sanofi","keywords":"Fourier transform infrared spectroscopy; Pertussis toxin; Chemistry; Adsorption; Bordetella pertussis; Adjuvant; Organic chemistry; Chemical engineering; Biochemistry; Biology; Immunology","score_opus":0.007843864801588009,"score_gpt":0.22550264164231512,"score_spread":0.21765877684072713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3115055834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98924625,0.0013599045,0.001016453,0.007925241,0.00017593073,0.000057478843,0.00017775915,0.0000361131,0.0000048767292],"genre_scores_gemma":[0.9982472,0.000089638335,0.0011809033,0.00023622838,0.000048726833,6.7871997e-7,0.00018451065,0.0000056966364,0.0000064080114],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991706,0.00006360362,0.00035829967,0.00022233058,0.000028392502,0.00015678555],"domain_scores_gemma":[0.99947935,0.00008737489,0.00020412798,0.000059359558,0.000121232435,0.00004854679],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000046969613,0.00015790548,0.00040940332,0.00031202176,0.00028956047,0.000025448517,0.00010738819,0.00027708287,0.0005035789],"category_scores_gemma":[0.000037568785,0.0001204217,0.00009293132,0.00040502974,0.00019993813,0.00009556738,0.000089050605,0.0003803804,0.0000017852736],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034605895,0.000021258611,0.04447008,0.000023517174,0.004360696,0.0000055833116,0.00033914373,0.0020590294,0.929599,0.007838317,0.0005512473,0.010386093],"study_design_scores_gemma":[0.0029741384,0.0006512886,0.92087215,0.000022947474,0.0013582546,0.0030083195,0.00021671315,0.011626145,0.047896527,0.009546103,0.0014088042,0.00041858575],"about_ca_topic_score_codex":0.0000121947905,"about_ca_topic_score_gemma":0.000005746833,"teacher_disagreement_score":0.8817024,"about_ca_system_score_codex":0.000011349617,"about_ca_system_score_gemma":0.000027008775,"threshold_uncertainty_score":0.5513836},"labels":[],"label_agreement":null},{"id":"W3116197429","doi":"10.1016/j.vaccine.2020.12.015","title":"Proceedings of a workshop to discuss the epidemiology of invasive Haemophilus influenzae disease with emphasis on serotype a and b in the Americas, 2019","year":2020,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University; Public Health Agency of Canada; National Research Council Canada","funders":"Canadian Dairy Commission","keywords":"Epidemiology; Public health; Haemophilus influenzae; Agency (philosophy); Environmental health; Medicine; Library science; Biology; Microbiology; Pathology; Sociology; Social science","score_opus":0.03534237384304769,"score_gpt":0.28702881399077235,"score_spread":0.2516864401477247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116197429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97413576,0.0006165538,0.000006065639,0.024702974,0.000042232437,0.00042840737,0.00002773389,0.000009580536,0.00003068029],"genre_scores_gemma":[0.9978834,0.00011224865,0.000024904552,0.0018613847,0.000034663062,0.000030679017,0.000008477932,0.000007964887,0.00003631452],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99928683,0.0000910314,0.0002621518,0.000193161,0.000012170408,0.00015466099],"domain_scores_gemma":[0.9991677,0.00045599855,0.00014721962,0.00013400837,0.000066548506,0.000028567245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019277721,0.000121438345,0.00033007676,0.00006110531,0.000054875705,0.0000034308307,0.00016812938,0.000058711234,0.00004346656],"category_scores_gemma":[0.00057799276,0.000054248245,0.00003589495,0.00040897148,0.00004298684,0.000044623423,0.00007345348,0.0001535796,0.00001127781],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008408629,0.00027283354,0.8949176,0.000103851824,0.00022278455,0.0000020993616,0.0037432965,0.00009654592,0.07765402,0.0014440907,0.0101092225,0.0030249946],"study_design_scores_gemma":[0.0013280471,0.0011314912,0.9853495,0.00010642864,0.000075081116,0.000018777526,0.0009666441,0.0000030650297,0.0032833063,0.00010646645,0.007519476,0.00011173027],"about_ca_topic_score_codex":0.00017578059,"about_ca_topic_score_gemma":0.00008171934,"teacher_disagreement_score":0.090431854,"about_ca_system_score_codex":0.000005528997,"about_ca_system_score_gemma":0.000023571278,"threshold_uncertainty_score":0.22121792},"labels":[],"label_agreement":null},{"id":"W3117493653","doi":"10.3389/fimmu.2020.605273","title":"Anti-FIM and Anti-FHA Antibodies Inhibit Bordetella pertussis Growth and Reduce Epithelial Cell Inflammation Through Bacterial Aggregation","year":2020,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur","keywords":"Bordetella pertussis; Antibody; Microbiology; Proinflammatory cytokine; Chemokine; Immunology; Vaccination; Pertussis toxin; Monoclonal antibody; Biology; Inflammation; Bacteria; Cell biology; Signal transduction; G protein","score_opus":0.009526924949769106,"score_gpt":0.21594396525688006,"score_spread":0.20641704030711094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3117493653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988381,0.005411782,0.0004247703,0.0019218929,0.0031529095,0.00030703683,0.000045577064,0.000085063904,0.00026996506],"genre_scores_gemma":[0.99085575,0.007456927,0.0011140058,0.0000840261,0.00021983462,0.000016955473,0.00015819658,0.00002593764,0.00006837441],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837327,0.00028674604,0.00046709235,0.00047991346,0.000019452173,0.0003735205],"domain_scores_gemma":[0.999477,0.00006318,0.0002051602,0.00016625636,0.000064053966,0.000024299243],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011825698,0.000279624,0.0005744702,0.00018034327,0.00025383692,0.000055827426,0.00012817222,0.00048160634,0.00009915185],"category_scores_gemma":[0.00015952943,0.00026769956,0.000055136803,0.00022421668,0.00039010827,0.00041670495,0.00016460265,0.00034148913,0.000026403819],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034349298,0.000044293993,0.026520386,0.00005536434,0.00011506767,0.0000027990077,0.0019065469,0.0000016329399,0.9632152,0.00022764072,0.0009852104,0.006582394],"study_design_scores_gemma":[0.0042749234,0.00043786914,0.07155827,0.00006395072,0.000088240835,0.00008973904,0.0010843041,0.00002898133,0.8921446,0.00045211095,0.02928027,0.00049671327],"about_ca_topic_score_codex":0.00026276996,"about_ca_topic_score_gemma":0.000012679727,"teacher_disagreement_score":0.07107054,"about_ca_system_score_codex":0.000025119682,"about_ca_system_score_gemma":0.000045031877,"threshold_uncertainty_score":0.9999775},"labels":[],"label_agreement":null},{"id":"W3121051395","doi":"10.1016/s1473-3099(20)30690-3","title":"First immunogenicity data for the UK serogroup B meningococcal vaccination schedule in infants","year":2021,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institutes of Health","keywords":"Meningococcal disease; Medicine; Meningococcal vaccine; Vaccination; Epidemiology; Pediatrics; Public health; Family medicine; Neisseria meningitidis; Immunization; Virology; Immunology; Internal medicine","score_opus":0.04409851047605997,"score_gpt":0.2933088266865947,"score_spread":0.24921031621053472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121051395","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41841832,0.05388152,0.000770748,0.48676684,0.019052798,0.0059825093,0.013486457,0.0009402719,0.0007005452],"genre_scores_gemma":[0.849796,0.0036590737,0.000023436694,0.107753195,0.0122056315,0.0018386245,0.023390524,0.00015241702,0.0011810993],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980202,0.00037821475,0.00041626775,0.0005594222,0.000038717993,0.0005872226],"domain_scores_gemma":[0.9962364,0.0014667044,0.00027364667,0.0018712825,0.00013864602,0.000013314851],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042051869,0.00037299987,0.0006452361,0.00010255515,0.00080934336,0.00017498576,0.0010947632,0.00060146337,0.0010795355],"category_scores_gemma":[0.00054013,0.00023129779,0.00020351267,0.0002982088,0.00009882388,0.00016491626,0.0005915064,0.0012168351,0.000076376025],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020426836,0.00017427327,0.02814748,0.00016782121,0.00092835305,0.000005382057,0.00007584269,0.00004669625,0.0006432279,0.00011857027,0.967851,0.0016370799],"study_design_scores_gemma":[0.0023976113,0.00009326362,0.068780445,0.000108969994,0.00051566004,0.000086047316,0.000034196393,0.000060983068,0.0001597143,0.00031923468,0.927084,0.0003598487],"about_ca_topic_score_codex":0.00094668457,"about_ca_topic_score_gemma":0.0020472675,"teacher_disagreement_score":0.43137768,"about_ca_system_score_codex":0.000097454984,"about_ca_system_score_gemma":0.00013251243,"threshold_uncertainty_score":0.9998336},"labels":[],"label_agreement":null},{"id":"W3122876401","doi":"10.21037/tp-20-255","title":"An improved clinical prediction rule for identifying neonatal bacterial meningitis: a multicenter cohort study","year":2021,"lang":"en","type":"article","venue":"Translational Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; University of Ottawa","keywords":"Medicine; Prospective cohort study; Cohort; Logistic regression; Receiver operating characteristic; Meningitis; Internal medicine; Cohort study; Retrospective cohort study; Cerebrospinal fluid; CSF pleocytosis; Pediatrics","score_opus":0.033650723077151834,"score_gpt":0.33088220937294677,"score_spread":0.29723148629579493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122876401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984912,0.00022382267,0.008223882,0.000060694263,0.005087683,0.00071623886,0.0006530072,0.00009578627,0.000026918078],"genre_scores_gemma":[0.9942464,0.00004044515,0.0010215451,0.000014888867,0.0013252406,0.00010553498,0.003083718,0.000021158152,0.00014103057],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985883,0.00020151888,0.0005659555,0.0003979367,0.000033113676,0.00021315503],"domain_scores_gemma":[0.999166,0.00023047323,0.0001088882,0.00018133169,0.0002779974,0.00003530535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004805747,0.00014208736,0.0002381438,0.000075213786,0.00027387077,0.00006638243,0.00008858887,0.00022260084,0.0006452881],"category_scores_gemma":[0.00008605483,0.00014577438,0.00015114681,0.0001296925,0.000028988194,0.00030928862,0.00001763867,0.00018732357,0.000032226824],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006691768,0.0011721276,0.88651913,0.000024500914,0.00026946925,0.0000019483186,0.00037705517,0.000019336312,0.106529295,0.00006440523,0.0003397619,0.004013815],"study_design_scores_gemma":[0.0071659954,0.0004627853,0.98353803,0.000004319946,0.0004701767,0.000026035328,0.00020972137,0.00029480035,0.0019037755,0.00013502297,0.0055696727,0.00021966285],"about_ca_topic_score_codex":0.000038190323,"about_ca_topic_score_gemma":0.000106765874,"teacher_disagreement_score":0.10462552,"about_ca_system_score_codex":0.000015671794,"about_ca_system_score_gemma":0.00011808084,"threshold_uncertainty_score":0.70654523},"labels":[],"label_agreement":null},{"id":"W3123665560","doi":"10.1038/s41467-021-21096-5","title":"Author Correction: Uncoupling of invasive bacterial mucosal immunogenicity from pathogenicity","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; McMaster University; University of Bern","keywords":"Immunogenicity; Pathogenicity; Microbiology; Pathogenicity island; Computational biology; Biology; Escherichia coli; Immunology; Genetics; Gene; Antigen","score_opus":0.02291263773752855,"score_gpt":0.28418379405741795,"score_spread":0.2612711563198894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123665560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98032725,0.0098112235,0.00009400508,0.0013541545,0.0070888232,0.00014086695,0.0004188207,0.000087200606,0.0006776761],"genre_scores_gemma":[0.99533826,0.00057200174,0.0010349321,0.000063326486,0.00012215963,0.000024525638,0.0022075637,0.000015507901,0.0006217349],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878806,0.00036211126,0.00040991371,0.00024264654,0.000022961063,0.000174323],"domain_scores_gemma":[0.9970136,0.0007024675,0.00022325611,0.0015179255,0.00052106177,0.000021689442],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001693186,0.0001558399,0.0003081303,0.000065432025,0.00044642104,0.000026545322,0.0005494463,0.0006544847,0.0012287988],"category_scores_gemma":[0.0006530384,0.0001561894,0.00018104048,0.00034640028,0.00015112243,0.00011864856,0.0004956302,0.00097245764,0.00008025349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006872401,0.00027081755,0.0048614834,0.0000038848007,0.0002413131,4.6457436e-7,0.00017784443,0.0000027155738,0.9872924,0.0011837273,0.004729827,0.001166771],"study_design_scores_gemma":[0.0011291136,0.000065091735,0.0752342,0.0000633055,0.00020885417,0.000075550546,0.00039306254,0.000019847686,0.7888926,0.00038310274,0.13325687,0.00027838262],"about_ca_topic_score_codex":0.00056234957,"about_ca_topic_score_gemma":0.0040078443,"teacher_disagreement_score":0.1983998,"about_ca_system_score_codex":0.00005103895,"about_ca_system_score_gemma":0.00026551163,"threshold_uncertainty_score":0.9996842},"labels":[],"label_agreement":null},{"id":"W3124271020","doi":"10.1080/14760584.2021.1878030","title":"Use of Cost-Effectiveness Analyses for Decisions About Vaccination Programs for Meningococcal Disease in the United States, United Kingdom, The Netherlands, and Canada","year":2021,"lang":"en","type":"review","venue":"Expert Review of Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal vaccine; Vaccination; Meningococcal disease; Medicine; Population; Environmental health; Cost effectiveness; Incidence (geometry); Neisseria meningitidis; Immunology; Immunization; Risk analysis (engineering)","score_opus":0.1853566809836511,"score_gpt":0.4366879165877731,"score_spread":0.251331235604122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124271020","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021885126,0.9902757,0.0002655536,0.00023163714,0.0003807711,0.006161074,0.000486184,0.000009936571,6.595273e-7],"genre_scores_gemma":[0.00033121865,0.9868713,0.00006395583,0.00013340979,0.00006542836,0.0035128219,0.00896739,0.000032289463,0.000022172619],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99692625,0.0014229255,0.001010985,0.00034190627,0.000041681695,0.00025625384],"domain_scores_gemma":[0.9924563,0.0056939903,0.00069146394,0.00051440374,0.0006146663,0.000029139352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008645613,0.00038967247,0.0017456319,0.00024296824,0.00019394992,0.000038284055,0.00033469332,0.00016906994,0.000036227862],"category_scores_gemma":[0.0016874773,0.00019130643,0.00042607644,0.00096836634,0.00003391009,0.000071136375,0.00007726165,0.00018865078,1.753661e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023340338,0.00042705244,0.0004259305,0.04726566,0.0012378688,0.0000016169555,0.00012787782,0.000015500336,0.00006635335,0.0005762808,0.024134902,0.9254876],"study_design_scores_gemma":[0.0005787616,0.00009934805,0.00049233023,0.040634498,0.0009934214,0.000015382253,0.00004398164,0.000013445723,0.00002153862,0.000008785192,0.9569024,0.000196124],"about_ca_topic_score_codex":0.10602802,"about_ca_topic_score_gemma":0.036967676,"teacher_disagreement_score":0.9327675,"about_ca_system_score_codex":0.000059729533,"about_ca_system_score_gemma":0.00039987874,"threshold_uncertainty_score":0.9806051},"labels":[],"label_agreement":null},{"id":"W3124477985","doi":"10.3390/toxins13020075","title":"Staphylococcus aureus Extracellular Vesicles: A Story of Toxicity and the Stress of 2020","year":2021,"lang":"en","type":"article","venue":"Toxins","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; York University","keywords":"Staphylococcus aureus; Microbiology; Hemolysin; Cytotoxicity; Cytolysis; Biology; Virulence; Extracellular; Internalization; Superantigen; Toxin; Lysis; Chemistry; Biochemistry; Bacteria; In vitro; Cell","score_opus":0.009777478169286698,"score_gpt":0.2235190648295141,"score_spread":0.2137415866602274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124477985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98964906,0.009315475,0.000039841376,0.00026046223,0.00026312823,0.00008567723,0.00007999801,0.000010167803,0.00029619044],"genre_scores_gemma":[0.9987135,0.0002497046,0.000022308908,0.00001597515,0.000027686068,0.0000046457812,0.000012817953,0.0000045981265,0.0009487811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993762,0.00024734187,0.00016553483,0.00010693921,0.000009716118,0.00009428994],"domain_scores_gemma":[0.9994738,0.00015730795,0.000093069866,0.00020082411,0.00006638755,0.000008597137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018063534,0.0000677717,0.00020593204,0.00001997497,0.00008644204,0.0000040846044,0.00006800271,0.00008778536,0.00040207023],"category_scores_gemma":[0.00007558491,0.000047086585,0.000059620008,0.00008101866,0.00021431793,0.00002920998,0.000059764214,0.00013828854,0.000006305063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009803161,0.00015266622,0.0012966861,0.000027553086,0.00010225994,9.733794e-7,0.0005638007,0.0000022027075,0.99386,0.0017756481,0.00043759,0.0016825759],"study_design_scores_gemma":[0.0017999762,0.000081728,0.017811721,0.000024532514,0.000049229668,0.000009435934,0.00076746906,0.000002364405,0.9661028,0.0001270123,0.01315911,0.000064657965],"about_ca_topic_score_codex":0.00006923748,"about_ca_topic_score_gemma":0.00011084543,"teacher_disagreement_score":0.02775725,"about_ca_system_score_codex":0.000004878085,"about_ca_system_score_gemma":0.00003801223,"threshold_uncertainty_score":0.4402387},"labels":[],"label_agreement":null},{"id":"W3127097470","doi":"10.53318/msp.v9i02.1510","title":"Investigation d'un cas de récidive de méningite, W135 et Y à Yirimadio, Bamako, Juin 2019","year":2019,"lang":"fr","type":"article","venue":"Mali Santé Publique","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"École Nationale d'Administration Publique","funders":"","keywords":"Medicine; Humanities; Gynecology; Art","score_opus":0.011075672563651703,"score_gpt":0.25246847916844234,"score_spread":0.24139280660479062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127097470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96993685,0.0076211696,0.00067471527,0.010370796,0.0049234116,0.0005104693,0.00023095708,0.00016098085,0.0055706645],"genre_scores_gemma":[0.94365525,0.0014875728,0.0010891497,0.0040404503,0.00053935935,0.00006542569,0.0005915996,0.00007719742,0.04845399],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99667054,0.001314656,0.0005087559,0.00053581013,0.000032761065,0.000937499],"domain_scores_gemma":[0.99848336,0.00032227352,0.00028117976,0.0005212283,0.00025680294,0.00013515078],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011205941,0.00040251313,0.00048848666,0.00028255436,0.00023395932,0.00021426748,0.00031514472,0.0011734151,0.009497126],"category_scores_gemma":[0.00032071766,0.00042047325,0.00019698024,0.00039741438,0.00020296675,0.0007381415,0.00020238635,0.00086720096,0.0018297149],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016228943,0.00018664348,0.2095162,0.00015041127,0.00038818977,0.00001632229,0.0021793968,0.00005873848,0.6255939,0.042595796,0.1141099,0.0050422265],"study_design_scores_gemma":[0.0020087585,0.00060937647,0.37974444,0.00030509583,0.00017380109,0.0014901777,0.00042664286,0.000078408884,0.17262803,0.00405048,0.43771848,0.0007663007],"about_ca_topic_score_codex":0.007753375,"about_ca_topic_score_gemma":0.0005910875,"teacher_disagreement_score":0.45296586,"about_ca_system_score_codex":0.00031550304,"about_ca_system_score_gemma":0.00074052217,"threshold_uncertainty_score":0.9998247},"labels":[],"label_agreement":null},{"id":"W3129630150","doi":"10.1097/inf.0000000000003047","title":"VA-MENGOC-BC Vaccination Induces Serum and Mucosal Anti Neisseria gonorrhoeae Immune Responses and Reduces the Incidence of Gonorrhea","year":2021,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Gonorrhea; Neisseria gonorrhoeae; Medicine; Neisseria meningitidis; Vaccination; Incidence (geometry); Immunology; Meningococcal vaccine; Virology; Antibody; Microbiology; Immunization; Human immunodeficiency virus (HIV); Biology","score_opus":0.008538845309685836,"score_gpt":0.24546104205705752,"score_spread":0.2369221967473717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3129630150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9814409,0.015719637,0.000011622685,0.0011745108,0.0013575822,0.00016056788,0.000032940152,0.000029563076,0.00007270456],"genre_scores_gemma":[0.9892276,0.0100617,0.000005496353,0.00004657557,0.0004301861,0.0000111623485,0.0000065985005,0.0000138606265,0.00019680764],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99843013,0.0006758598,0.0004241449,0.000195634,0.00002210068,0.00025215646],"domain_scores_gemma":[0.99856216,0.00052286126,0.00036529996,0.0002272192,0.00026464305,0.00005783685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006672961,0.00018489412,0.00025192517,0.00014854521,0.0010170037,0.00013606028,0.00014596042,0.00011336432,0.0003333837],"category_scores_gemma":[0.0005771682,0.00011350782,0.00009576403,0.00036020426,0.00009976635,0.0002749788,0.0001604539,0.00044786118,0.0000118192165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005668057,0.0003390309,0.7374027,0.00008144881,0.0003275446,0.000006062195,0.0010424708,0.000032580218,0.24911588,0.00046895095,0.0006592102,0.009957361],"study_design_scores_gemma":[0.0009164603,0.00014893399,0.98746496,0.000016694597,0.00041424856,0.0018959722,0.0004001724,0.000008489105,0.007156901,0.000828048,0.0005871179,0.00016198956],"about_ca_topic_score_codex":0.00013260928,"about_ca_topic_score_gemma":0.00002287058,"teacher_disagreement_score":0.25006232,"about_ca_system_score_codex":0.00002712384,"about_ca_system_score_gemma":0.0002980486,"threshold_uncertainty_score":0.7822073},"labels":[],"label_agreement":null},{"id":"W3130495577","doi":"10.1016/j.jiac.2021.01.017","title":"Invasive Haemophilus influenzae type a infection and polyarthritis in a 72-year-old Japanese man: A case report","year":2021,"lang":"en","type":"article","venue":"Journal of Infection and Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Polyarthritis; Medicine; Haemophilus influenzae; Throat; Medical microbiology; Chills; Serotype; Arthritis; Virology; Internal medicine; Immunology; Microbiology; Antibiotics; Surgery; Biology","score_opus":0.013234223804715143,"score_gpt":0.2634985660112029,"score_spread":0.2502643422064878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130495577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969485,0.001306103,0.0000099049985,0.0004713204,0.00095441646,0.00008543591,0.0000022066326,0.000017288843,0.00020481642],"genre_scores_gemma":[0.9932959,0.0055732024,0.00003100553,0.00036186335,0.00014617252,0.0000033514214,0.0000056639346,0.0000134649335,0.00056937936],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99913424,0.000092044946,0.0004355005,0.00016153723,0.000020371162,0.00015631378],"domain_scores_gemma":[0.99925566,0.000058053098,0.00027069382,0.00010971847,0.0002678182,0.000038083755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024927923,0.00013819787,0.00030176266,0.00022414015,0.00013193025,0.000051472154,0.000016250115,0.00021587477,0.0003588252],"category_scores_gemma":[0.00012967856,0.00012384394,0.000075986594,0.0002826979,0.000057738634,0.00023254922,0.000023756727,0.00030443145,0.000006526478],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083724444,0.0006010684,0.58295465,0.00009371534,0.00046812816,0.005366242,0.0020772545,0.000008839433,0.38582334,0.00017517686,0.0017617875,0.019832516],"study_design_scores_gemma":[0.006150066,0.0008860221,0.35917562,0.00018987452,0.00005583801,0.56266165,0.00034226725,0.0000017543258,0.038712386,0.00031022905,0.031252712,0.00026162138],"about_ca_topic_score_codex":0.0013396642,"about_ca_topic_score_gemma":0.0017033818,"teacher_disagreement_score":0.5572954,"about_ca_system_score_codex":0.000039505478,"about_ca_system_score_gemma":0.00006875453,"threshold_uncertainty_score":0.505021},"labels":[],"label_agreement":null},{"id":"W3130519850","doi":"10.1016/j.vaccine.2021.02.001","title":"Impact of maternal diphtheria-tetanus-acellular pertussis vaccination on pertussis booster immune responses in toddlers: Follow-up of a randomized trial","year":2021,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; Centre Hospitalier Universitaire Sainte-Justine; University of Calgary; Université de Montréal; Canadian Institute for Advanced Research; Dalhousie University","funders":"Fakultní nemocnice Hradec Králové; GlaxoSmithKline","keywords":"Tetanus; Diphtheria; Medicine; Vaccination; Booster dose; Booster (rocketry); Immunology; Whooping cough; Pediatrics; Immune system; Immunization","score_opus":0.01798275266642988,"score_gpt":0.27753077100427925,"score_spread":0.25954801833784935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130519850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951865,0.0021669683,0.000030096737,0.00026648282,0.0014332269,0.000636975,0.000071124494,0.000027309166,0.00018131915],"genre_scores_gemma":[0.9961791,0.00039488904,0.00003106259,0.000013771008,0.000075019074,0.000046537047,0.00011007146,0.000028004228,0.003121526],"study_design_codex":"bench_or_experimental","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9972269,0.0010344546,0.0010809576,0.00032233904,0.00004455624,0.0002907871],"domain_scores_gemma":[0.99825615,0.0005816826,0.0004519256,0.00044729703,0.00023860745,0.000024347162],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00077211345,0.00027871729,0.00136029,0.00039208255,0.000066673136,0.000021679216,0.00015673897,0.0002780691,0.0064618476],"category_scores_gemma":[0.00084856537,0.00019834601,0.0007259598,0.00036867263,0.000018812178,0.00013801231,0.00008079213,0.00019235985,0.000033981716],"study_design_candidate":"randomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.45748547,0.0004191778,0.004386616,0.000021736292,0.00051465584,0.0000039139677,0.00023841862,0.000005974906,0.53492,0.00005022893,0.000115677336,0.0018381565],"study_design_scores_gemma":[0.5533949,0.0011390931,0.10702529,0.00013139799,0.000177082,0.000044087406,0.00007748589,0.000013045733,0.3373791,0.000052592743,0.00037751495,0.00018842141],"about_ca_topic_score_codex":0.0009881287,"about_ca_topic_score_gemma":0.000075558964,"teacher_disagreement_score":0.19754086,"about_ca_system_score_codex":0.00007964748,"about_ca_system_score_gemma":0.00013425853,"threshold_uncertainty_score":0.9944464},"labels":[],"label_agreement":null},{"id":"W3133641607","doi":"10.1016/j.vaccine.2021.02.050","title":"Infant pertussis and maternal immunity: The curious case of Canada","year":2021,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institute for Clinical Evaluative Sciences; Public Health Ontario; University of Toronto","funders":"","keywords":"Outbreak; Epidemiology; Medicine; Demography; Incidence (geometry); Pertussis vaccine; Whooping cough; Pediatrics; Relative risk; Herd immunity; Environmental health; Vaccination; Population; Immunology; Virology; Immunization; Confidence interval; Immune system","score_opus":0.0064313067971662145,"score_gpt":0.21415431793680242,"score_spread":0.2077230111396362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133641607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99508286,0.0027448626,0.000002763554,0.0013890106,0.00053370494,0.0000415789,0.000035350804,0.000008134572,0.0001617191],"genre_scores_gemma":[0.9983959,0.00017234779,0.00000896908,0.00010934758,0.000026234165,0.000002207242,0.000012761667,0.0000048711036,0.0012673235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995782,0.00007588163,0.00014297136,0.00008114652,0.0000054962634,0.00011634983],"domain_scores_gemma":[0.999619,0.00006773116,0.000047544192,0.00018639285,0.0000686924,0.000010637105],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006794302,0.00006788193,0.00013601466,0.000018876568,0.00018224548,0.00000893518,0.0000456256,0.000046599962,0.00097339036],"category_scores_gemma":[0.000039971506,0.000042149117,0.000021354352,0.00007586133,0.000008604277,0.000024235176,0.00007860509,0.000102531856,0.0000032666164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001402485,0.00009622226,0.06528502,0.000048221907,0.00044534748,0.00031566503,0.00049163797,0.0000029831335,0.90241337,0.001042016,0.017427633,0.012291611],"study_design_scores_gemma":[0.0020248778,0.00012009032,0.32784408,0.00003859689,0.00012014287,0.03194544,0.0009086339,0.000008250261,0.34688783,0.000105743646,0.28978992,0.0002063941],"about_ca_topic_score_codex":0.5186307,"about_ca_topic_score_gemma":0.52660674,"teacher_disagreement_score":0.55552554,"about_ca_system_score_codex":0.000010594721,"about_ca_system_score_gemma":0.00011761462,"threshold_uncertainty_score":0.99993986},"labels":[],"label_agreement":null},{"id":"W3133726952","doi":"10.3390/microorganisms9030535","title":"Bacterial Meningitis in Children: Neurological Complications, Associated Risk Factors, and Prevention","year":2021,"lang":"en","type":"review","venue":"Microorganisms","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Meningitis; Streptococcus pneumoniae; Neisseria meningitidis; Pediatrics; Hydrocephalus; Vaccination; Hearing loss; Case fatality rate; Intensive care medicine; Antibiotics; Immunology; Surgery; Internal medicine; Epidemiology","score_opus":0.02311380150563613,"score_gpt":0.27495849199989564,"score_spread":0.2518446904942595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133726952","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28883412,0.7096038,0.000006763128,0.000009556853,0.0005427811,0.00046722643,0.00045461397,0.00006694724,0.000014192443],"genre_scores_gemma":[0.004603283,0.98711056,0.00003610608,0.0000064921287,0.00006242645,0.00004756961,0.007892794,0.000044613116,0.00019618354],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99755114,0.0009643819,0.0006044991,0.0005628114,0.000012974467,0.0003041934],"domain_scores_gemma":[0.99909514,0.00015357368,0.00041503296,0.0002717899,0.000040522344,0.000023950706],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019226843,0.00040382825,0.001297993,0.00015907451,0.00022635028,0.00007903843,0.0001710677,0.000910179,0.001026989],"category_scores_gemma":[0.0001360298,0.00033010566,0.00024224156,0.00026434497,0.00007189323,0.00006242781,0.00019250344,0.0006547531,0.00009910435],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024534735,0.0014271825,0.060994945,0.00062421965,0.002742094,0.000007248917,0.00020589803,2.031425e-7,0.031418517,0.00032634856,0.004428157,0.8978006],"study_design_scores_gemma":[0.0009454763,0.00023062457,0.07091396,0.0010777819,0.0008477916,0.00042521846,0.000008222031,4.1995776e-8,0.00042486505,0.00003888038,0.924527,0.00056015863],"about_ca_topic_score_codex":0.00019461055,"about_ca_topic_score_gemma":0.000058615537,"teacher_disagreement_score":0.92009884,"about_ca_system_score_codex":0.000054623375,"about_ca_system_score_gemma":0.00008709583,"threshold_uncertainty_score":0.9999151},"labels":[],"label_agreement":null},{"id":"W3135563487","doi":"10.3389/fmicb.2021.628801","title":"Comparative Analysis of Outer Membrane Vesicle Isolation Methods With an Escherichia coli tolA Mutant Reveals a Hypervesiculating Phenotype With Outer-Inner Membrane Vesicle Content","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"Public Health Agency; Public Health Agency of Canada; Research Manitoba","keywords":"Bacterial outer membrane; Escherichia coli; Vesicle; Nanoparticle tracking analysis; Microbiology; Biology; Mutant; Virulence; Bacteria; Extracellular vesicle; Chemistry; Membrane; Cell biology; Biochemistry; Genetics; Microvesicles; Gene","score_opus":0.02817096069953291,"score_gpt":0.2821330679524073,"score_spread":0.2539621072528744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135563487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9773541,0.0007664492,0.020469835,0.00012298075,0.0006717959,0.00034478278,0.000110919944,0.000042873682,0.000116283314],"genre_scores_gemma":[0.9349066,0.000024080458,0.0638963,0.00014679559,0.000030914867,0.00003270634,0.00066258176,0.0000224245,0.00027760366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968897,0.0013339187,0.0006868854,0.0006237217,0.000019319457,0.00044646958],"domain_scores_gemma":[0.9985936,0.00015227828,0.00041489294,0.00046561414,0.00033370577,0.000039898343],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048124083,0.00033076623,0.0013746953,0.00034429767,0.00015075454,0.000026971375,0.00018443691,0.00032193805,0.0002888492],"category_scores_gemma":[0.00003858705,0.0002517949,0.0001428317,0.0011147963,0.00026637854,0.00021302201,0.00007120185,0.00031278477,0.000006841346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012652446,0.00034407864,0.031649172,0.000026769265,0.002659543,0.000011051217,0.0014752974,0.00052308594,0.96129656,0.000100828365,0.00009934047,0.0005490061],"study_design_scores_gemma":[0.0036168117,0.0010000361,0.050040245,0.00007459222,0.0013251033,0.00011686287,0.0025923112,0.0007432122,0.93844277,0.000026506843,0.0015198458,0.00050172245],"about_ca_topic_score_codex":0.00036005795,"about_ca_topic_score_gemma":0.0007165128,"teacher_disagreement_score":0.04342646,"about_ca_system_score_codex":0.00007802061,"about_ca_system_score_gemma":0.000092247676,"threshold_uncertainty_score":0.99999344},"labels":[],"label_agreement":null},{"id":"W3137378387","doi":"10.1016/j.jogc.2020.12.006","title":"Clinical Conundrum: Neisseria meningitidis Septic Abortion","year":2021,"lang":"en","type":"article","venue":"Journal of Obstetrics and Gynaecology Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Septic shock; Septic abortion; Neisseria meningitidis; Antibiotics; Abortion; Curettage; Intensive care medicine; Neisseria gonorrhoeae; Intensive care unit; Sepsis; Pregnancy; Internal medicine; Surgery; Microbiology; Bacteria","score_opus":0.015348934078280784,"score_gpt":0.2614247307295755,"score_spread":0.24607579665129473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137378387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95623535,0.008575979,0.000024820818,0.0003459895,0.034254365,0.000033872406,0.00001214234,0.0000040260547,0.00051344384],"genre_scores_gemma":[0.99830836,0.00053648767,0.000090149486,0.00019195142,0.000043824708,8.3950533e-7,0.00001188294,0.0000071797017,0.000809305],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988827,0.00017754633,0.00060470164,0.00012570879,0.000018236255,0.00019109831],"domain_scores_gemma":[0.9977616,0.0012962401,0.00035710516,0.000101614874,0.0004262908,0.000057157584],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025461946,0.000097310156,0.00036260913,0.00008723282,0.00013396387,0.000020080024,0.00007423734,0.0002062971,0.0015291206],"category_scores_gemma":[0.002246869,0.000084161475,0.00008080127,0.00021251041,0.000055799686,0.000072880146,0.000039673123,0.00034143994,0.0000046518344],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028585702,0.00039862806,0.7324596,0.00004413089,0.0012524206,0.0009891995,0.00009414374,0.000019423605,0.025807751,0.0015947539,0.032527905,0.20478345],"study_design_scores_gemma":[0.0021828236,0.00033783622,0.70282376,0.0000045211764,0.00014082859,0.00057814975,0.00021971142,0.000002723136,0.0015525497,0.00012721398,0.2919,0.0001298606],"about_ca_topic_score_codex":0.003148481,"about_ca_topic_score_gemma":0.017349102,"teacher_disagreement_score":0.25937212,"about_ca_system_score_codex":0.00015630653,"about_ca_system_score_gemma":0.0012446226,"threshold_uncertainty_score":0.9993836},"labels":[],"label_agreement":null},{"id":"W3137621775","doi":"10.1016/j.jim.2021.113037","title":"Development of a non-biased, high-throughput ELISA for the rapid evaluation of immunogenicity and cross-reactivity","year":2021,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Alberta Heritage Foundation for Medical Research","keywords":"Immunogenicity; Streptavidin; Avidin; Biotin; Biotinylation; Polyclonal antibodies; Fusion protein; Antigen; Epitope; Transferrin; Chemistry; Molecular biology; Biology; Recombinant DNA; Microbiology; Biochemistry; Gene; Immunology","score_opus":0.10395279162097587,"score_gpt":0.42695201356881646,"score_spread":0.3229992219478406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137621775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94652414,0.012599483,0.039369393,0.00012515648,0.0011198521,0.00021269417,0.000012800132,0.0000040656864,0.000032394528],"genre_scores_gemma":[0.8891991,0.0006041096,0.11008826,0.000014537577,0.000039135262,0.00001743242,0.0000065956096,0.0000062511863,0.000024580931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977298,0.0010401524,0.0008660724,0.00014532196,0.000052430412,0.00016625627],"domain_scores_gemma":[0.9958654,0.0017511657,0.0008531853,0.00021620063,0.0013021369,0.000011877667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0059133917,0.00013592729,0.0005497332,0.000064243344,0.00021040306,0.000017438782,0.00017095148,0.00024517506,0.00043570803],"category_scores_gemma":[0.002223513,0.00008059513,0.00021334233,0.00015897467,0.00024940362,0.000124413,0.00012554627,0.0002923285,9.540179e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049074035,0.00021351277,0.0003677444,0.00001306794,0.0005326605,1.7321382e-7,0.00016676348,0.000007794309,0.703428,0.00007870286,0.000012448978,0.2946884],"study_design_scores_gemma":[0.002281334,0.00031607927,0.24233073,0.00003739326,0.0002376863,0.00010540437,0.00023512554,0.000016209917,0.74977595,0.00040392144,0.0041867,0.00007345418],"about_ca_topic_score_codex":0.00002217163,"about_ca_topic_score_gemma":0.0000040608206,"teacher_disagreement_score":0.29461494,"about_ca_system_score_codex":0.000053194603,"about_ca_system_score_gemma":0.00029174474,"threshold_uncertainty_score":0.47706977},"labels":[],"label_agreement":null},{"id":"W3137952195","doi":"10.3201/eid2704.191716","title":"Genomic Surveillance of a Globally Circulating Distinct Group W Clonal Complex 11 Meningococcal Variant, New Zealand, 2013–2018","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Institute of Environmental Science and Research","keywords":"Meningococcal Infections; Genetics; Neisseria meningitidis; Biology; Multilocus sequence typing; Group (periodic table); Meningococcal disease; Virology; Computational biology; Genotype; Gene","score_opus":0.01387444899403855,"score_gpt":0.24778462960064906,"score_spread":0.2339101806066105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137952195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99495816,0.0012492106,0.00080334424,0.00022401825,0.0017185247,0.00014740272,0.00025040118,0.00019468227,0.00045425142],"genre_scores_gemma":[0.99829674,0.00006803491,0.00006736608,0.00005337231,0.0003208068,0.000013321765,0.00064971694,0.000027757855,0.0005029105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998458,0.00024164192,0.0004659169,0.00040190804,0.000036771646,0.00039574096],"domain_scores_gemma":[0.9990771,0.00015980065,0.0002446676,0.00031322145,0.00013016624,0.00007505746],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012404892,0.00024976357,0.00044655672,0.00008669114,0.00032278328,0.00004823538,0.00014208847,0.00012909471,0.0026855138],"category_scores_gemma":[0.000158555,0.00024974032,0.00022284171,0.00029315992,0.00009322325,0.00009865733,0.00016320235,0.00013753164,0.000085290754],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059694787,0.00029409057,0.7792068,0.000035748533,0.00030637422,0.000012073776,0.00008138551,0.00011485335,0.20208926,0.000735189,0.0156102795,0.001454219],"study_design_scores_gemma":[0.0018334804,0.00011211057,0.9212093,0.000044371405,0.00010866068,0.00042489977,0.000031690804,0.00004021488,0.00037719816,0.00034380105,0.07516203,0.00031227537],"about_ca_topic_score_codex":0.004149677,"about_ca_topic_score_gemma":0.002259218,"teacher_disagreement_score":0.20171206,"about_ca_system_score_codex":0.000067558045,"about_ca_system_score_gemma":0.00016655494,"threshold_uncertainty_score":0.99999547},"labels":[],"label_agreement":null},{"id":"W3139270685","doi":"10.1016/j.vaccine.2021.03.009","title":"Vaccine coverage among children with epilepsy in two Canadian provinces: A Canadian immunization research network study","year":2021,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Ottawa; Public Health Ontario; Ottawa Public Health; University of Toronto; Dalhousie University; University of Manitoba; Ottawa Hospital; Institute for Clinical Evaluative Sciences","funders":"Canadian Institutes of Health Research; Canadian Immunization Research Network; Public Health Agency of Canada","keywords":"Medicine; Epilepsy; Pediatrics; Odds ratio; Vaccination; Measles; Confidence interval; Tetanus; Diphtheria; MMR vaccine; Cohort; Logistic regression; Measles-Mumps-Rubella Vaccine; Retrospective cohort study; Pertussis vaccine; Immunization; Cohort study; Epilepsy in children; Demography; Rubella; Immunology; Psychiatry; Surgery; Internal medicine","score_opus":0.02918345177381546,"score_gpt":0.32489968882999765,"score_spread":0.29571623705618216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139270685","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.061699864,0.9326723,0.000001978395,0.000066807384,0.00080259325,0.004003611,0.00018724537,0.000050538758,0.00051502447],"genre_scores_gemma":[0.10047556,0.89199847,0.000010159873,0.000029024226,0.00047541867,0.00036187036,0.005127274,0.0001408265,0.0013814053],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948941,0.0017758331,0.00088628294,0.0008728855,0.00005156349,0.0015193699],"domain_scores_gemma":[0.99799067,0.00018872201,0.00025247457,0.0010051526,0.0003440507,0.00021890298],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013987743,0.0006167165,0.0019473598,0.0016173973,0.0008189326,0.00014992003,0.00058910105,0.0005422784,0.0018303341],"category_scores_gemma":[0.00012816528,0.00048645237,0.00015334284,0.0029898325,0.000019247078,0.00018024795,0.00017822004,0.0017275256,0.00021301201],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007232892,0.00048618982,0.7194098,0.0005070204,0.0019216501,0.00013952206,0.0002910967,0.0000766468,0.000002623225,0.00021897508,0.010763602,0.2661105],"study_design_scores_gemma":[0.0023363829,0.00048453073,0.1264086,0.00382431,0.0004132916,0.00023908922,0.000100074394,7.354391e-7,0.0000012027991,0.0000064060077,0.86556643,0.000618927],"about_ca_topic_score_codex":0.9758581,"about_ca_topic_score_gemma":0.99880004,"teacher_disagreement_score":0.85480285,"about_ca_system_score_codex":0.0011533609,"about_ca_system_score_gemma":0.004407864,"threshold_uncertainty_score":0.9997587},"labels":[],"label_agreement":null},{"id":"W3147253343","doi":"10.1016/j.vaccine.2004.03.004","title":"Letter to the Editor","year":2004,"lang":"en","type":"letter","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Medicine","score_opus":0.00955818657385948,"score_gpt":0.22669584206334042,"score_spread":0.21713765548948094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3147253343","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012338359,0.00046094618,0.00004724335,0.9488436,0.048534792,0.0003579751,0.00009211578,0.00011258834,0.00031693123],"genre_scores_gemma":[0.00072020525,0.000021762982,0.000017181046,0.8320189,0.138953,0.000050063245,0.0005602892,0.00004797214,0.027610641],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988772,0.00010116462,0.0002565656,0.0003381587,0.000017542481,0.0004093596],"domain_scores_gemma":[0.99913585,0.000083839026,0.00008887987,0.0006050514,0.00007464139,0.0000117302525],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010536445,0.00028956248,0.00032440608,0.00013152976,0.00022317076,0.00004109274,0.00038882063,0.0010047031,0.0037558863],"category_scores_gemma":[0.000040158695,0.00017235387,0.00014271565,0.00016344167,0.000007812525,0.000039783456,0.00012912037,0.001569762,0.010553402],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019179377,0.000015216638,0.000018261842,0.000013386093,0.000115176226,0.0000051997336,0.00003171954,0.0000018301739,0.006847946,0.000009988122,0.99251413,0.0004079349],"study_design_scores_gemma":[0.0005044042,0.00010704855,0.00028723787,0.000037089798,0.00006289172,0.000058824764,0.0000017827662,1.8963599e-8,0.0021257561,0.000032463347,0.996556,0.00022647878],"about_ca_topic_score_codex":0.00033215637,"about_ca_topic_score_gemma":0.00006349666,"teacher_disagreement_score":0.11682469,"about_ca_system_score_codex":0.000054466007,"about_ca_system_score_gemma":0.00004588971,"threshold_uncertainty_score":0.99715483},"labels":[],"label_agreement":null},{"id":"W314785865","doi":"","title":"Epidemiology and outcome of bacterial meningitis in Canadian children: 1998-1999.","year":2006,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Medicine; Meningitis; Neisseria meningitidis; Streptococcus pneumoniae; Pediatrics; Pneumococcal conjugate vaccine; Conjugate vaccine; Epidemiology; Vaccination; Internal medicine; Immunization; Immunology; Microbiology; Antibiotics","score_opus":0.017761436851724918,"score_gpt":0.22913032142578002,"score_spread":0.21136888457405512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W314785865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969282,0.0010433198,0.000001620284,0.0002574533,0.0007517334,0.00025737495,0.00008221599,0.000015141687,0.00066291756],"genre_scores_gemma":[0.99921584,0.000024881721,0.000017762739,0.0000347785,0.00008509029,0.00012887116,0.00015740964,0.0000068939075,0.00032846662],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988995,0.00013277782,0.00035975265,0.0001617531,0.0000037409961,0.0004424593],"domain_scores_gemma":[0.9996746,0.00009251277,0.000082430466,0.00010571991,0.000010600593,0.00003413927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039616314,0.000093058865,0.00030083145,0.00018196052,0.000053487387,0.000003133943,0.00005983761,0.00018922104,0.000115120434],"category_scores_gemma":[0.00011268913,0.000084957195,0.000036525085,0.0000834288,0.00008368304,0.000047842794,0.000025227051,0.00010063058,0.000013733401],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002376473,0.000021046726,0.98909104,0.0000032312516,0.00002315129,4.433929e-7,0.000009693736,8.9642265e-7,0.0030424993,0.0010939897,0.00070724374,0.0059830076],"study_design_scores_gemma":[0.0006736129,0.000016314041,0.97518003,0.0000019862757,0.000010318206,0.00004796578,0.0000024079582,2.0603474e-7,0.0011953398,0.00017117208,0.022619883,0.00008074044],"about_ca_topic_score_codex":0.59196997,"about_ca_topic_score_gemma":0.4254299,"teacher_disagreement_score":0.16654003,"about_ca_system_score_codex":0.000037804548,"about_ca_system_score_gemma":0.000019506433,"threshold_uncertainty_score":0.5850545},"labels":[],"label_agreement":null},{"id":"W3148151625","doi":"10.3390/ijms22083858","title":"Bacterial Membrane Vesicles in Pneumonia: From Mediators of Virulence to Innovative Vaccine Candidates","year":2021,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Bundesministerium für Bildung und Forschung; Berlin Institute of Health; Deutsche Forschungsgemeinschaft; Deutsche Stiftung für Herzforschung; Deutsches Zentrum für Herz-Kreislaufforschung","keywords":"Virulence; Microbiology; Biology; Pneumonia; Pathogen; Bacterial outer membrane; Antibiotics; Population; Immune system; Immunology; Medicine; Escherichia coli","score_opus":0.018500904001691704,"score_gpt":0.3184005089651368,"score_spread":0.2998996049634451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3148151625","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31027824,0.68520963,0.00003549923,0.00018163542,0.0040232404,0.00009920662,0.00013724076,0.0000031408258,0.000032152308],"genre_scores_gemma":[0.070832334,0.9283618,0.00031928552,0.000044093096,0.00030816617,0.000008424274,0.000096391625,0.000014083309,0.00001547182],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981725,0.00027694044,0.0010394696,0.00024118443,0.00011168473,0.00015820653],"domain_scores_gemma":[0.9981175,0.00025209523,0.000910124,0.000109911605,0.0005841005,0.000026256503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004894145,0.000204245,0.0010039081,0.00075021625,0.000034999426,0.00005494632,0.00086974096,0.00017832161,0.00049276673],"category_scores_gemma":[0.00033793863,0.00015093845,0.00020683155,0.00067575945,0.00009426368,0.00017393641,0.00018456083,0.00028176422,0.000019989537],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010132256,0.00019489886,0.00036679642,0.00012986464,0.0011305083,0.000115815434,0.0003180034,0.0000151881295,0.6102765,0.00051484664,0.00020153642,0.38663468],"study_design_scores_gemma":[0.0016069072,0.00062097574,0.00085003884,0.012845273,0.0003164722,0.00066605775,0.00022407502,7.286461e-7,0.19110727,0.00019860885,0.79100174,0.0005618419],"about_ca_topic_score_codex":0.00031031948,"about_ca_topic_score_gemma":0.0000814541,"teacher_disagreement_score":0.7908002,"about_ca_system_score_codex":0.00007083823,"about_ca_system_score_gemma":0.0006004536,"threshold_uncertainty_score":0.61550915},"labels":[],"label_agreement":null},{"id":"W3152779883","doi":"10.1007/s42399-021-00883-7","title":"Predicting Cognitive Rehabilitation Needs in Patients with Central Nervous System Infections Using Montreal Cognitive Assessment","year":2021,"lang":"en","type":"article","venue":"SN Comprehensive Clinical Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Montreal Cognitive Assessment; Rehabilitation; Medicine; Cognition; Odds ratio; Physical therapy; Young adult; Cognitive impairment; Gerontology; Internal medicine; Psychiatry","score_opus":0.030539195826870077,"score_gpt":0.33781526385112853,"score_spread":0.30727606802425844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3152779883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99443483,0.00021299982,0.00067262695,0.00021779317,0.0028397713,0.00068283954,0.00007589654,0.000089924964,0.0007733102],"genre_scores_gemma":[0.9988186,0.000020989746,0.000084665735,0.00013138905,0.00028676548,0.000035422603,0.0005570307,0.000022609423,0.000042571693],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99718475,0.001011424,0.00091196346,0.0004391088,0.000059109592,0.000393653],"domain_scores_gemma":[0.9944508,0.0035147346,0.00030933553,0.00017415891,0.0014768832,0.00007407597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002533246,0.000247485,0.0007119775,0.00021635742,0.00024297745,0.000014360497,0.00005566078,0.00026480542,0.00021762095],"category_scores_gemma":[0.0011994578,0.00019420378,0.00010252473,0.0006109548,0.00038873166,0.00013517585,0.00008321399,0.00062870496,0.000019230412],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000568405,0.0008976854,0.9908621,0.000067751665,0.0003727643,0.000009828961,0.00044573162,0.000033782464,0.0013684307,0.000096460215,0.0000844891,0.0051926216],"study_design_scores_gemma":[0.011047797,0.002897556,0.9750122,0.001666368,0.00035887116,0.000040329247,0.008383961,0.00012643231,0.00007477161,0.000018297702,0.00018299853,0.00019046005],"about_ca_topic_score_codex":0.0010639495,"about_ca_topic_score_gemma":0.0004412668,"teacher_disagreement_score":0.015849892,"about_ca_system_score_codex":0.00013854667,"about_ca_system_score_gemma":0.00018287073,"threshold_uncertainty_score":0.79194003},"labels":[],"label_agreement":null},{"id":"W3153148622","doi":"10.2139/ssrn.3352010","title":"Influenza Increases Invasive Meningococcal Disease Risk in Temperate Countries","year":2019,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Nova Scotia Health Authority; Canadian Blood Services; Public Health Ontario; University of Toronto","funders":"","keywords":"Meningococcal disease; Medicine; Disease; Temperate climate; Virology; Environmental health; Neisseria meningitidis; Biology; Internal medicine; Bacteria","score_opus":0.005596987402623018,"score_gpt":0.23161437277828975,"score_spread":0.22601738537566674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153148622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992675,0.0063840277,0.0000145543845,0.00012643187,0.00046500328,0.00017919444,0.000020851969,0.00003076583,0.00010415358],"genre_scores_gemma":[0.9931613,0.0055954466,0.0000022457205,0.00010312026,0.00009989168,0.0000121559315,0.00001734956,0.000016307882,0.000992175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978865,0.00027608185,0.00031208163,0.00020137934,0.000020868745,0.0013031065],"domain_scores_gemma":[0.99942464,0.00012269492,0.00016828321,0.00016495265,0.00008154114,0.00003788393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076983776,0.00017025096,0.00024173387,0.00017676382,0.00022410823,0.00004885331,0.00016002801,0.00012616478,0.00064975116],"category_scores_gemma":[0.00017564642,0.00013876945,0.000089793684,0.00013928826,0.000053199667,0.00026323687,0.000048511243,0.0014236688,0.00073315325],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008624115,0.00014102558,0.9418925,0.000008932741,0.00026463845,0.0000018332313,0.00012082329,0.00004503907,0.038771454,0.017010253,0.00012810346,0.00075298967],"study_design_scores_gemma":[0.016610272,0.0020974942,0.8105989,0.0002851983,0.00033935963,0.0014180966,0.003460608,0.000010710278,0.010658214,0.06809761,0.08512714,0.0012963817],"about_ca_topic_score_codex":0.0010131254,"about_ca_topic_score_gemma":0.0022785757,"teacher_disagreement_score":0.13129358,"about_ca_system_score_codex":0.00033397356,"about_ca_system_score_gemma":0.0016465677,"threshold_uncertainty_score":0.94234467},"labels":[],"label_agreement":null},{"id":"W3155090119","doi":"10.9778/cmajo.20200239","title":"Obstetric and perinatal health outcomes after pertussis vaccination during pregnancy in Ontario, Canada: a retrospective cohort study","year":2021,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"The Society of Obstetricians and Gynaecologists of Canada; BC Children's Hospital; Ottawa Hospital; Izaak Walton Killam Health Centre; Children's Hospital of Eastern Ontario; Queen's University; Bruyère; Toronto Public Health; Public Health Ontario; University of British Columbia; Kingston Health Sciences Centre; University of Ottawa; Dalhousie University; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Retrospective cohort study; Medicine; Pregnancy; Vaccination; Cohort; Obstetrics; Cohort study; Pediatrics; Virology","score_opus":0.013323708743773411,"score_gpt":0.2587233873833695,"score_spread":0.24539967863959605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155090119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965799,0.0012950337,4.799321e-7,0.0002807537,0.0006248807,0.0007826088,0.000018545055,0.000010153041,0.000407651],"genre_scores_gemma":[0.9933929,0.0000454156,0.00000895011,0.000036812464,0.000005585953,0.00019163737,0.000023327455,0.00000882907,0.0062865703],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990927,0.00013064087,0.00022524851,0.0003296817,0.000018947418,0.00020279121],"domain_scores_gemma":[0.9996216,0.000031994437,0.00006439105,0.00019427319,0.000066681336,0.000021031408],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008316916,0.00012112379,0.0003498745,0.00007227321,0.00018098087,0.000057854108,0.00009529832,0.00006000471,0.0018029668],"category_scores_gemma":[0.00007283544,0.00010706427,0.000021443466,0.00017442062,0.00000749453,0.00018326253,0.00027007368,0.00019306477,0.0000053546296],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034675435,0.00011429672,0.99789655,0.000011074204,0.000089238296,0.000027310487,0.0008170646,2.0144857e-7,0.00021107263,0.000017794126,0.000051063722,0.000729686],"study_design_scores_gemma":[0.0016180512,0.00008396168,0.9968207,0.000047033773,0.000013769696,0.0000508553,0.000420469,1.561291e-7,0.00017954767,0.000006077878,0.000640121,0.00011926263],"about_ca_topic_score_codex":0.97322214,"about_ca_topic_score_gemma":0.9983737,"teacher_disagreement_score":0.025151527,"about_ca_system_score_codex":0.0007846825,"about_ca_system_score_gemma":0.0005387624,"threshold_uncertainty_score":0.9991095},"labels":[],"label_agreement":null},{"id":"W3155763864","doi":"10.1542/peds.2020-042507","title":"Health Outcomes in Young Children Following Pertussis Vaccination During Pregnancy","year":2021,"lang":"en","type":"article","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia; Toronto Public Health; Mount Sinai Hospital; Izaak Walton Killam Health Centre; University Health Network; Ottawa Hospital; The Society of Obstetricians and Gynaecologists of Canada; Children's Hospital of Eastern Ontario; Public Health Ontario; Dalhousie University; University of Toronto; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Vaccination; Pediatrics; Pregnancy; Population; Retrospective cohort study; Diphtheria; Tetanus; Adverse effect; Incidence (geometry); Cohort study; Obstetrics; Immunology; Environmental health; Internal medicine","score_opus":0.00859097088803782,"score_gpt":0.25584090458380243,"score_spread":0.24724993369576462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155763864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915381,0.005831728,0.000029877256,0.00061064475,0.0015845636,0.00012891312,0.000015818656,0.000060680875,0.00019964151],"genre_scores_gemma":[0.9974573,0.0010908004,0.000056273082,0.000019109231,0.00007502978,0.000015482216,0.000112585236,0.000012122897,0.0011612935],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991465,0.00010168633,0.00026452035,0.00021356982,0.000015523714,0.0002581992],"domain_scores_gemma":[0.9996694,0.000045202476,0.0000800587,0.00015451727,0.00003468069,0.000016141708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007644518,0.0001082791,0.00023655349,0.00015056475,0.00018386052,0.000022399752,0.000063964224,0.00011828466,0.00017865794],"category_scores_gemma":[0.00013060271,0.00010223486,0.00010011634,0.00032481563,0.000003055634,0.00013004841,0.00006104757,0.00016206404,0.000053903957],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000038783405,0.0001145807,0.9942033,0.000020570604,0.000029558161,0.0000024036035,0.00019816005,0.0000026990324,0.0029093574,0.000047151505,0.00007911695,0.0023892066],"study_design_scores_gemma":[0.0010008706,0.000020803653,0.9974444,0.000016074478,0.000020902391,0.000050492406,0.000042614844,6.207803e-7,0.0011934926,0.00002375373,0.00007611555,0.00010985833],"about_ca_topic_score_codex":0.00045609963,"about_ca_topic_score_gemma":0.00070880074,"teacher_disagreement_score":0.0059191715,"about_ca_system_score_codex":0.000073184405,"about_ca_system_score_gemma":0.00007345161,"threshold_uncertainty_score":0.41690165},"labels":[],"label_agreement":null},{"id":"W3156260088","doi":"10.21203/rs.3.rs-379923/v1","title":"Biological functions of Lacticaseibacillus rhamnosus JB-1 membrane vesicles: lipoteichoic acid, immune activity, and gut epithelial endocytosis","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Hospital for Sick Children; McMaster University","keywords":"Lipoteichoic acid; Endocytosis; Lactobacillus rhamnosus; Internalization; Cell biology; TLR2; Biology; Bacteria; Immune system; Microbiology; Receptor; Biochemistry; Lactobacillus; TLR4; Immunology; Signal transduction; Staphylococcus aureus","score_opus":0.06577766667392645,"score_gpt":0.3482692223524378,"score_spread":0.28249155567851136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3156260088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875565,0.008100702,0.000075029195,0.00066025753,0.0014540683,0.0007530137,0.0007764634,0.000100746605,0.0005232136],"genre_scores_gemma":[0.9929709,0.0050289626,0.00005508486,0.000005379671,0.00031010283,0.0002205009,0.0005515252,0.000037380603,0.0008201537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958289,0.001852098,0.000554819,0.0008881014,0.0001081995,0.0007678465],"domain_scores_gemma":[0.9969943,0.0010197844,0.00022379337,0.0009330446,0.0007384484,0.00009059362],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011204653,0.0004061694,0.0009510151,0.0005130538,0.0005734359,0.0001431312,0.00035474097,0.0012146544,0.0023616052],"category_scores_gemma":[0.0011024767,0.00034293561,0.00036294907,0.00048331742,0.000725028,0.00014129463,0.0020657324,0.0023170332,0.00014736118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006194756,0.00047795963,0.00090813986,0.00042252045,0.0005545349,0.000016319707,0.0002358048,0.0000059086296,0.98235196,0.00011366224,0.00016947022,0.014124234],"study_design_scores_gemma":[0.0019452429,0.0011156525,0.045287598,0.00052763714,0.0001322709,0.00026771793,0.0012129677,0.000008063107,0.93692625,0.00015695121,0.011915869,0.0005037691],"about_ca_topic_score_codex":0.0027852852,"about_ca_topic_score_gemma":0.00023360904,"teacher_disagreement_score":0.04542571,"about_ca_system_score_codex":0.0001292109,"about_ca_system_score_gemma":0.00040163667,"threshold_uncertainty_score":0.9999847},"labels":[],"label_agreement":null},{"id":"W3156862599","doi":"10.1016/j.vaccine.2021.03.031","title":"A multisite study of pertussis vaccine effectiveness by time since last vaccine dose from three Canadian provinces: A Canadian Immunization Research Network study","year":2021,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; Provincial Laboratory of Public Health; Alberta Health; University of Manitoba; University of Alberta; University of Calgary; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Vaccination; Pertussis vaccine; Medicine; Immunization; Demography; Population; Vaccine efficacy; Pediatrics; Environmental health; Immunology","score_opus":0.01632914315073927,"score_gpt":0.2715485389378567,"score_spread":0.25521939578711744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3156862599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99377614,0.0023757154,0.00001614805,0.00038447132,0.0007366412,0.0021820199,0.00034853318,0.00006752439,0.000112798836],"genre_scores_gemma":[0.9978275,0.000060706687,0.000024261815,0.000038947528,0.00018998687,0.00012740571,0.0011302687,0.000066860244,0.0005341114],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99556047,0.0017549506,0.0007034311,0.0008361396,0.00008540515,0.001059626],"domain_scores_gemma":[0.99695915,0.000617009,0.00018044823,0.0010428691,0.00097461476,0.0002258811],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012194109,0.00040985952,0.00087713683,0.0005477671,0.0010757011,0.00009019121,0.00048172195,0.00033723578,0.002131932],"category_scores_gemma":[0.00034331923,0.00036965962,0.00008740532,0.0018821766,0.000012786205,0.00023314601,0.00026682293,0.00062390935,0.0002544788],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006737925,0.0020228268,0.87668455,0.000025220344,0.0009684756,0.000047618374,0.0010018107,0.00011263677,0.10997958,0.00001788742,0.00571281,0.0027527781],"study_design_scores_gemma":[0.0089520095,0.0019502501,0.9726706,0.00013336254,0.00020902682,0.000025155869,0.0014579683,0.00006424243,0.0037825217,0.000028979239,0.010321394,0.0004044686],"about_ca_topic_score_codex":0.9600616,"about_ca_topic_score_gemma":0.9968037,"teacher_disagreement_score":0.10619706,"about_ca_system_score_codex":0.0004911121,"about_ca_system_score_gemma":0.0007683878,"threshold_uncertainty_score":0.99987555},"labels":[],"label_agreement":null},{"id":"W3157945938","doi":"10.1016/j.jinf.2021.04.031","title":"Recent advances in meningococcal B disease prevention: real-world evidence from 4CMenB vaccination","year":2021,"lang":"en","type":"review","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Université Laval","funders":"National Institute for Health and Care Research","keywords":"Medicine; Vaccination; Observational study; Licensure; Meningococcal disease; Immunization; Meningococcal vaccine; Outbreak; Epidemiology; Disease; Pediatrics; Immunogenicity; Family medicine; Environmental health; Immunology; Virology; Nursing; Internal medicine","score_opus":0.0599912108501561,"score_gpt":0.3896107378061526,"score_spread":0.3296195269559965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157945938","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002042552,0.99210054,0.00016388162,0.00005846487,0.0051677143,0.00029168022,0.000012117759,0.000018133578,0.00014490989],"genre_scores_gemma":[0.0002606931,0.9985429,0.00003546812,0.0000048583,0.00058554474,0.00003751109,0.00014481055,0.000019890704,0.0003683401],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974554,0.00087748957,0.001202907,0.00025023764,0.000040020386,0.00017395568],"domain_scores_gemma":[0.9977094,0.00031866258,0.0014186641,0.000191587,0.00032129968,0.000040371346],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00056665647,0.00026442212,0.0011028864,0.0005833745,0.00009955242,0.000050276587,0.00010417951,0.0002710892,0.0019771073],"category_scores_gemma":[0.00039934678,0.00021254717,0.00049035857,0.0006352049,0.0000147041255,0.0007660958,0.0000528774,0.0006770464,0.000045352193],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006697787,0.00021405825,0.0014456415,0.0005755816,0.00017762229,0.000007649613,0.000020946965,0.000011147437,0.00006818032,0.000036739777,0.0006391625,0.9967363],"study_design_scores_gemma":[0.00042032715,0.0001656095,0.005933065,0.01612248,0.00065957685,0.00008753087,0.0000059083272,4.7456146e-7,0.000037330356,0.00008705849,0.976295,0.00018564617],"about_ca_topic_score_codex":0.000102369595,"about_ca_topic_score_gemma":0.00071125216,"teacher_disagreement_score":0.9965506,"about_ca_system_score_codex":0.0004560695,"about_ca_system_score_gemma":0.00044104998,"threshold_uncertainty_score":0.9989352},"labels":[],"label_agreement":null},{"id":"W3159123728","doi":"10.1016/j.vaccine.2021.04.032","title":"Pertussis vaccine effectiveness and duration of protection – A systematic review and meta-analysis","year":2021,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Research Manitoba","keywords":"Observational study; Meta-analysis; Pertussis vaccine; Medicine; Confounding; Receipt; Duration (music); Whooping cough; Random effects model; Systematic review; Immunology; MEDLINE; Vaccination; Immunization; Internal medicine; Biology; Computer science; Immune system","score_opus":0.04984851123349985,"score_gpt":0.31558363779056325,"score_spread":0.2657351265570634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159123728","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006531799,0.9965021,0.000119458164,0.00008355313,0.00010097415,0.0030105128,0.0000807151,0.000031352425,0.0000059983213],"genre_scores_gemma":[0.00052971597,0.9980653,0.000013885868,0.000015959904,0.000014869477,0.0007277068,0.00027531467,0.000026200534,0.00033103363],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99644446,0.0016860757,0.0011849413,0.0005042841,0.00002131664,0.00015891709],"domain_scores_gemma":[0.9979788,0.00032884243,0.000944065,0.00050330977,0.00022165368,0.00002334963],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00087228743,0.00044913642,0.008835878,0.00041383735,0.00012090698,0.00002661392,0.000090417045,0.00037862273,0.0007051984],"category_scores_gemma":[0.00033124138,0.0002715344,0.0012361088,0.0010101586,0.000007836729,0.00009443799,0.00010103688,0.00024240023,0.000012405595],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008118506,0.00006159795,0.000004079658,0.82336944,0.17206869,6.792994e-7,0.000009217645,7.31936e-8,0.00016374259,0.000050917573,0.000046601792,0.0042168587],"study_design_scores_gemma":[0.00028095668,0.000115824536,0.00005438145,0.027168654,0.941996,0.00031033208,0.0000046512555,3.5826648e-7,0.00006654009,0.0000032770408,0.029737283,0.00026177554],"about_ca_topic_score_codex":0.00014177072,"about_ca_topic_score_gemma":0.00004493567,"teacher_disagreement_score":0.79620075,"about_ca_system_score_codex":0.000028977413,"about_ca_system_score_gemma":0.000041273055,"threshold_uncertainty_score":0.99997365},"labels":[],"label_agreement":null},{"id":"W3164163709","doi":"10.1128/cmr.00028-21","title":"Invasive Haemophilus influenzae Infections after 3 Decades of Hib Protein Conjugate Vaccine Use","year":2021,"lang":"en","type":"review","venue":"Clinical Microbiology Reviews","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"Sanofi Pasteur; Sanofi; Pfizer; Johns Hopkins University; Seqirus; AstraZeneca; Public Health England","keywords":"Conjugate vaccine; Haemophilus influenzae; Serotype; Meningitis; Medicine; Hib vaccine; Virology; Pneumonia; Immunology; Immunization; Microbiology; Antibiotics; Biology; Pediatrics; Antigen; Internal medicine","score_opus":0.12170364074352259,"score_gpt":0.39470529675981336,"score_spread":0.2730016560162908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164163709","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0078017716,0.98466945,0.000009377253,0.00004542036,0.0032511558,0.0033424343,0.00075975346,0.00008164826,0.0000389643],"genre_scores_gemma":[0.000076049786,0.99458224,0.00014792399,0.00026569184,0.00033962206,0.0010646629,0.0016725153,0.000091151225,0.0017601624],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9876797,0.00516253,0.005188889,0.001278744,0.00000620857,0.0006838969],"domain_scores_gemma":[0.9932923,0.0021246437,0.0026002198,0.0014718347,0.00041801023,0.000093044895],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0014713818,0.0010524638,0.008252534,0.00035772676,0.00018957423,0.000044801076,0.00057803007,0.0030850268,0.002620459],"category_scores_gemma":[0.0042134374,0.0007531614,0.0030625253,0.0006999999,0.0006026748,0.00018245503,0.0006650559,0.0020201756,0.0025787347],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019134617,0.002109602,0.0025006032,0.021857744,0.005678518,0.000014031519,0.000050098588,1.8625062e-7,0.020825567,0.00042378463,0.043857425,0.9024911],"study_design_scores_gemma":[0.0008460816,0.00060096587,0.00006302531,0.018745856,0.0020594343,0.0007511352,0.000002412207,5.096445e-9,0.00014249864,0.000015151125,0.9761118,0.00066160446],"about_ca_topic_score_codex":0.00007355372,"about_ca_topic_score_gemma":0.00016656258,"teacher_disagreement_score":0.93225443,"about_ca_system_score_codex":0.00009921122,"about_ca_system_score_gemma":0.00073892117,"threshold_uncertainty_score":0.99949193},"labels":[],"label_agreement":null},{"id":"W3164676328","doi":"10.1128/mbio.00721-21","title":"Challenges and Controversies Concerning Neisseria gonorrhoeae-Neutrophil Interactions in Pathogenesis","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Government of Canada","keywords":"Neisseria gonorrhoeae; Gonorrhea; Gonococcal infection; Microbiology; Antibiotics; Neisseria; Incidence (geometry); Medicine; Antibiotic resistance; Neisseriaceae; Immunology; Biology; Virology; Bacteria; Sexually transmitted disease; Syphilis","score_opus":0.035657072969139,"score_gpt":0.2638847148792902,"score_spread":0.2282276419101512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164676328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9791126,0.016452124,0.0000037602963,0.0011358123,0.0009886916,0.00004642834,0.000011711073,0.000030354993,0.0022184902],"genre_scores_gemma":[0.9959942,0.00290487,0.00001439519,0.00006914611,0.00004735441,0.000011911044,0.00002679496,0.000006803662,0.0009245365],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99946874,0.000087099485,0.00012350739,0.00018021642,0.0000021145515,0.00013834653],"domain_scores_gemma":[0.99968064,0.00012383253,0.00003586419,0.00010957404,0.000039386032,0.000010687299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004845346,0.00008312014,0.00016073397,0.000050083767,0.00008554985,0.000016901038,0.0000318013,0.000065994005,0.0004077313],"category_scores_gemma":[0.00006413578,0.000081374536,0.000032211738,0.000052468473,0.00003415139,0.00008957464,0.00005008384,0.000106730935,0.00006299839],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004647766,0.000062532934,0.005693437,0.000010723768,0.000057863585,0.0000023078687,0.00046970896,0.0000012772739,0.9693897,0.0018299355,0.00022499933,0.022211049],"study_design_scores_gemma":[0.0019931889,0.000091951166,0.4794802,0.0000647115,0.000045083958,0.00033107962,0.0026600999,0.000003501374,0.05261398,0.00020823265,0.46226266,0.0002453121],"about_ca_topic_score_codex":0.00013775818,"about_ca_topic_score_gemma":0.0012742098,"teacher_disagreement_score":0.9167757,"about_ca_system_score_codex":0.00001870644,"about_ca_system_score_gemma":0.000020375805,"threshold_uncertainty_score":0.4464372},"labels":[],"label_agreement":null},{"id":"W3164937600","doi":"10.1016/s2589-7500(21)00077-7","title":"Changes in the incidence of invasive disease due to Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis during the COVID-19 pandemic in 26 countries and territories in the Invasive Respiratory Infection Surveillance Initiative: a prospective analysis of surveillance data","year":2021,"lang":"en","type":"article","venue":"The Lancet Digital Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":539,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Statens Serum Institut; Merck Sharp and Dohme; Sanofi Pasteur; Robert Koch Institut; Knut och Alice Wallenbergs Stiftelse; Bundesministerium für Gesundheit; Bundesamt für Gesundheit; ABB; Public Health England; European Centre for Disease Prevention and Control; St. George's, University of London; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; Ministry of Health; Wellcome Trust; Astellas Pharma US; Roche; Ministerstwo Edukacji i Nauki; GlaxoSmithKline; Merck; Public Health Agency; Royal College of Surgeons in Ireland; Vetenskapsrådet; Pfizer","keywords":"Streptococcus pneumoniae; Neisseria meningitidis; Haemophilus influenzae; Medicine; Incidence (geometry); Pandemic; Pneumonia; Population; Bacterial pneumonia; Transmission (telecommunications); Disease; Virology; Immunology; Microbiology; Infectious disease (medical specialty); Biology; Coronavirus disease 2019 (COVID-19); Internal medicine; Environmental health; Antibiotics","score_opus":0.05842116955319909,"score_gpt":0.3378731171085381,"score_spread":0.27945194755533903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164937600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912704,0.0022551306,0.0000035314063,0.004214522,0.00007620896,0.0007951429,0.0013588528,0.000014586353,0.0000116104],"genre_scores_gemma":[0.9972516,0.0013032436,9.05617e-7,0.0011465765,0.00004667975,0.00013848481,0.00010234567,0.000007935695,0.0000022344561],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977011,0.0011814936,0.0004344457,0.00034732625,0.00005497264,0.00028063764],"domain_scores_gemma":[0.9964309,0.0025013292,0.00030973504,0.00062645413,0.00010166314,0.000029968927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016568091,0.00017126705,0.0005751816,0.00017920978,0.00022694012,0.00008332927,0.00034977277,0.00006450327,0.0000041483354],"category_scores_gemma":[0.002074994,0.00009560318,0.0000283847,0.0012391346,0.0003398052,0.00028691915,0.0002953706,0.00028167822,4.735518e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031472257,0.00005317767,0.9897486,0.00018868769,0.00008374627,0.000007947783,0.0084256325,0.00006824455,0.00080147194,0.00013835463,0.000030523952,0.00013889148],"study_design_scores_gemma":[0.00069233304,0.0001265021,0.99575996,0.00008657058,0.000018844708,0.000033555996,0.0023124753,0.0000040051277,0.00016716616,0.00032539872,0.0003740302,0.00009913395],"about_ca_topic_score_codex":0.0049590343,"about_ca_topic_score_gemma":0.38810202,"teacher_disagreement_score":0.383143,"about_ca_system_score_codex":0.00008843541,"about_ca_system_score_gemma":0.00042279693,"threshold_uncertainty_score":0.7496609},"labels":[],"label_agreement":null},{"id":"W3165204560","doi":"10.1016/j.crmicr.2020.100010","title":"PMAP-36 reduces the innate immune response induced by Bordetella bronchiseptica-derived outer membrane vesicles","year":2020,"lang":"en","type":"article","venue":"Current Research in Microbial Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; CMC Microsystems","keywords":"Bordetella bronchiseptica; Bacterial outer membrane; Microbiology; Immune system; Innate immune system; Chemistry; Vesicle; Cathelicidin; Bacteria; Biology; Escherichia coli; Membrane; Biochemistry; Immunology","score_opus":0.11181227246370136,"score_gpt":0.3773745820035431,"score_spread":0.2655623095398418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165204560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9786834,0.0031786475,0.0000027582728,0.016237166,0.0012128745,0.0004610657,0.000032672862,0.000040106832,0.00015131275],"genre_scores_gemma":[0.99891055,0.00059205265,0.000014303923,0.000080757745,0.00019360038,0.000036749003,0.000022374616,0.000011872152,0.00013772257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99618036,0.0019049417,0.00043111818,0.0005802016,0.00009764521,0.0008057284],"domain_scores_gemma":[0.99895245,0.0005099621,0.00009408428,0.00024545842,0.0001307545,0.000067299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032155502,0.00020138851,0.0002707628,0.00022297734,0.0009758651,0.00023020076,0.0010241555,0.00014618204,0.00055650284],"category_scores_gemma":[0.0005817179,0.0001341673,0.00008751683,0.0013007508,0.0013837937,0.00019936917,0.00047311044,0.0008767885,0.0004016592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000736854,0.00012807394,0.00007579859,0.000012072966,0.000016845657,8.508725e-7,0.00090423797,0.00000229712,0.97823,0.000051097817,0.007644359,0.012197533],"study_design_scores_gemma":[0.0007175343,0.00054479606,0.0028410708,0.00006826224,0.0000051985417,0.000009469755,0.00047469023,0.000006184752,0.8561162,0.00004736169,0.13898742,0.00018182624],"about_ca_topic_score_codex":0.00033791322,"about_ca_topic_score_gemma":0.000030580573,"teacher_disagreement_score":0.13134307,"about_ca_system_score_codex":0.00005242994,"about_ca_system_score_gemma":0.00028756206,"threshold_uncertainty_score":0.7505664},"labels":[],"label_agreement":null},{"id":"W3165920221","doi":"10.7759/cureus.15402","title":"The Diagnostic Challenge of the Pediatric Brain Abscess","year":2021,"lang":"en","type":"article","venue":"Cureus","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brandon Regional Health Authority","funders":"","keywords":"Medicine; Presentation (obstetrics); Emergency department; Altered Mental Status; Brain abscess; Pediatrics; Intensive care medicine; Intervention (counseling); Disease; Abscess; Autism; Psychiatry; Pathology; Surgery","score_opus":0.012969619938940706,"score_gpt":0.24446951781068235,"score_spread":0.23149989787174163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165920221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9641271,0.025783893,0.000005680172,0.0043475693,0.0034059978,0.00008189495,0.000014624128,0.000016473556,0.0022167512],"genre_scores_gemma":[0.99549854,0.002174965,0.0000013181394,0.000045738427,0.0001344006,0.000011159739,0.0000050747713,0.0000048895618,0.002123934],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99955595,0.00011513584,0.00011946614,0.000085831765,0.000007608532,0.00011603796],"domain_scores_gemma":[0.998921,0.0006807614,0.000057306675,0.0002711277,0.00006460681,0.000005192284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008758635,0.000055128876,0.00008010999,0.0000068518243,0.00022168698,0.000009109271,0.00015129813,0.00008085939,0.00040230542],"category_scores_gemma":[0.00052953576,0.000028967968,0.000062642255,0.00010309799,0.00004861829,0.000023012186,0.00009073933,0.000104531406,0.00006670584],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008698553,0.0012531457,0.16976514,0.00013733696,0.00073059765,0.0000074856243,0.001964045,0.000012296945,0.5133109,0.08446462,0.19775623,0.030511217],"study_design_scores_gemma":[0.00089946925,0.00009710365,0.28650364,0.000020153317,0.00011766028,0.00007236437,0.0003240317,6.2606443e-7,0.042431835,0.002193731,0.6671641,0.0001752723],"about_ca_topic_score_codex":0.00004990103,"about_ca_topic_score_gemma":0.00024801772,"teacher_disagreement_score":0.47087905,"about_ca_system_score_codex":0.000006597217,"about_ca_system_score_gemma":0.000042283158,"threshold_uncertainty_score":0.4404962},"labels":[],"label_agreement":null},{"id":"W3171063586","doi":"10.1503/cmaj.202420","title":"Tdap vaccination in pregnancy","year":2021,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Incidence (geometry); Medicine; Vaccination; Confidence interval; Population; Pediatrics; Pregnancy; Intensive care unit; Environmental health; Intensive care medicine; Internal medicine; Immunology; Biology","score_opus":0.007368183560894682,"score_gpt":0.23177887527033617,"score_spread":0.22441069170944147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3171063586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9464876,0.0031221393,0.00005441495,0.031149043,0.0062714266,0.00008511919,0.00001951445,0.000023029133,0.012787699],"genre_scores_gemma":[0.9945541,0.00040881764,0.000013426741,0.0010403629,0.00030608216,0.0000049331743,0.000035145356,0.0000065969116,0.0036305303],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99913085,0.00021616291,0.0002515102,0.00009006784,0.000047042256,0.00026435],"domain_scores_gemma":[0.99942136,0.0000687137,0.00008211476,0.00005239368,0.00024951535,0.00012588309],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004238296,0.00005680897,0.000117683514,0.00012816394,0.00015510699,0.000039475734,0.000073772746,0.00038026948,0.02653528],"category_scores_gemma":[0.0010672922,0.000055312317,0.000045652632,0.00020995553,0.000004933486,0.000104034814,0.000009737746,0.0005600901,0.0004010381],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011568537,0.00019438293,0.4346381,0.000012773979,0.0002397634,0.00042730948,0.00066952984,0.0000048255365,0.0094216205,0.0026686445,0.20345345,0.34825802],"study_design_scores_gemma":[0.001444841,0.000023228611,0.31148016,0.000088806606,0.0000073650717,0.00080927357,0.00023200392,0.000005184401,0.0011103165,0.00031672168,0.6843751,0.000106966625],"about_ca_topic_score_codex":0.0015143697,"about_ca_topic_score_gemma":0.094619,"teacher_disagreement_score":0.4809217,"about_ca_system_score_codex":0.00044010236,"about_ca_system_score_gemma":0.0013936013,"threshold_uncertainty_score":0.9743546},"labels":[],"label_agreement":null},{"id":"W3172490779","doi":"10.1159/000515540","title":"Post-Traumatic Meningitis: Case-Based Review of Literature from Internists’ Perspective","year":2021,"lang":"en","type":"article","venue":"Case Reports in Acute Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Meningitis; Referral; Head trauma; Intensive care medicine; Context (archaeology); Surgery; General surgery; Pediatrics; Family medicine","score_opus":0.014538451264084378,"score_gpt":0.30089716032915964,"score_spread":0.28635870906507527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172490779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8312271,0.16339335,0.000054416727,0.0017115421,0.0018174923,0.00025744824,0.00014319229,0.000037868278,0.0013575335],"genre_scores_gemma":[0.9937149,0.0040480774,0.00015444134,0.0005418667,0.00010329129,0.00002912928,0.0007610524,0.000016925464,0.0006302597],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99847716,0.00020363665,0.00076903345,0.0003533368,0.000026655112,0.00017015917],"domain_scores_gemma":[0.99838525,0.00017190032,0.00034470056,0.0004815833,0.00058731984,0.00002923707],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032651646,0.00018761573,0.00064932584,0.00011631959,0.00007156123,0.000009501614,0.00003593395,0.0001690247,0.00286673],"category_scores_gemma":[0.0007741935,0.0001424377,0.00010982264,0.0003286873,0.0001278137,0.00006320368,0.00004345705,0.00031941917,0.0000057479983],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006923437,0.00025172805,0.00059044466,0.0012370916,0.00061064475,0.7954262,0.003343253,3.5732248e-7,0.1878925,0.00013061218,0.008406253,0.002041678],"study_design_scores_gemma":[0.0011722298,0.00029047558,0.0003259729,0.019730754,0.0005163289,0.9419083,0.0039606476,0.0000017867179,0.024250923,0.0001239513,0.007523352,0.00019529699],"about_ca_topic_score_codex":0.0033370801,"about_ca_topic_score_gemma":0.0005010357,"teacher_disagreement_score":0.16364159,"about_ca_system_score_codex":0.000077782825,"about_ca_system_score_gemma":0.000112262926,"threshold_uncertainty_score":0.9980448},"labels":[],"label_agreement":null},{"id":"W3175288849","doi":"","title":"Comparative analysis of outer membrane vesicles from cationic adapted Escherichia coli isolates reveals unique vesicle membrane morphologies and different antimicrobial susceptibilities when supplemented to unadapted E. coli","year":2021,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"","keywords":"Bacterial outer membrane; Antimicrobial; Microbiology; Chemistry; Escherichia coli; Vesicle; Biology; Biochemistry; Membrane","score_opus":0.02471763389991502,"score_gpt":0.262205369311826,"score_spread":0.23748773541191096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175288849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994104,0.00018656268,0.00023803818,0.003925041,0.00024193196,0.00039531235,0.0007313999,0.000093452545,0.000084246494],"genre_scores_gemma":[0.9954542,0.00009311394,0.00075611565,0.0007785875,0.000028557675,0.000033632303,0.00169842,0.000013556915,0.001143795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980166,0.00048236435,0.0006418466,0.000502019,0.00002835927,0.0003288156],"domain_scores_gemma":[0.99859804,0.00038354102,0.00019391986,0.00041722078,0.00036548663,0.000041795724],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012345298,0.00029567568,0.001006852,0.00024572064,0.00019616271,0.000058461657,0.0001569339,0.00022833793,0.0050483025],"category_scores_gemma":[0.00005955083,0.00025193498,0.00014814241,0.000552205,0.00017755719,0.00013049779,0.00018290675,0.00018350079,0.000017927643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002898389,0.00019963812,0.0086529795,0.000021204418,0.0027129268,0.0000018593141,0.0019785557,0.000047012694,0.981454,0.00037513062,0.004229532,0.00003728439],"study_design_scores_gemma":[0.0011209634,0.00019451327,0.09940566,0.000028408052,0.00078469445,0.000004335816,0.0020435553,0.000068618516,0.8943597,0.00008767917,0.0016356676,0.00026619193],"about_ca_topic_score_codex":0.005660523,"about_ca_topic_score_gemma":0.007386442,"teacher_disagreement_score":0.09075268,"about_ca_system_score_codex":0.000047674832,"about_ca_system_score_gemma":0.000065884386,"threshold_uncertainty_score":0.99999326},"labels":[],"label_agreement":null},{"id":"W3175752907","doi":"10.1038/s41598-021-93311-8","title":"Membrane vesicles of Lacticaseibacillus rhamnosus JB-1 contain immunomodulatory lipoteichoic acid and are endocytosed by intestinal epithelial cells","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Natural Sciences and Engineering Research Council of Canada; Hospital for Sick Children; McMaster University","keywords":"Lipoteichoic acid; Lactobacillus rhamnosus; Endocytosis; Internalization; Cell biology; TLR2; Bacteria; Biology; Microbiology; Intracellular; Receptor; Chemistry; Lactobacillus; Biochemistry; TLR4; Signal transduction; Staphylococcus aureus","score_opus":0.01015916287527972,"score_gpt":0.224563942601718,"score_spread":0.2144047797264383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175752907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988237,0.0025942645,0.000044060365,0.000088805245,0.0086136125,0.00015146627,0.0000450796,0.000047496047,0.00017816931],"genre_scores_gemma":[0.99703234,0.000033421333,0.00007007064,0.000014747668,0.000047449077,0.000009614188,0.00013799702,0.000013436754,0.0026409263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836373,0.00017374469,0.0005514503,0.0005740007,0.00004415221,0.00029289775],"domain_scores_gemma":[0.99859536,0.00009940416,0.00041110165,0.0005631857,0.00028745603,0.000043498538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056286895,0.0001764335,0.00036389497,0.000101448655,0.0003164469,0.00009535674,0.00007812478,0.00014361201,0.0006289594],"category_scores_gemma":[0.00029318762,0.00016007722,0.00009814421,0.00023810034,0.00041979345,0.00014293382,0.00011513385,0.0001810687,0.000034084587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059844246,0.00012608067,0.0012205146,0.00003316786,0.000076030876,0.00012890562,0.00010184097,0.0000012213956,0.99360085,0.000045167904,0.0027929412,0.0018134644],"study_design_scores_gemma":[0.00054940843,0.00007004513,0.0015862988,0.00003445487,0.000048336395,0.002135968,0.00018400545,0.000001364431,0.9318427,0.00020716341,0.06318688,0.00015337081],"about_ca_topic_score_codex":0.00012165371,"about_ca_topic_score_gemma":0.000045818535,"teacher_disagreement_score":0.061758112,"about_ca_system_score_codex":0.00002794936,"about_ca_system_score_gemma":0.00015731648,"threshold_uncertainty_score":0.6886664},"labels":[],"label_agreement":null},{"id":"W3179146975","doi":"10.3389/fimmu.2021.689394","title":"The Effect of Tetanus-Diphtheria-Acellular-Pertussis Immunization During Pregnancy on Infant Antibody Responses: Individual-Participant Data Meta-Analysis","year":2021,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"Medical Research Council; GlaxoSmithKline","keywords":"Medicine; Diphtheria; Tetanus; Immunization; Booster dose; Pertactin; Vaccination; Pregnancy; Pneumococcal conjugate vaccine; Immunology; Antibody; Pediatrics; Internal medicine; Streptococcus pneumoniae; Pertussis toxin; Microbiology","score_opus":0.09563108158471126,"score_gpt":0.3544087447433925,"score_spread":0.2587776631586812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179146975","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028988658,0.9918374,0.00008975618,0.00004559882,0.0031163995,0.0011485665,0.0007823292,0.000048878806,0.00003223161],"genre_scores_gemma":[0.0025132678,0.9905412,0.000079137346,0.0000032997416,0.000028315832,0.00039253972,0.0052469415,0.00007428814,0.0011209797],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.98906934,0.0072714463,0.0018535206,0.0010111511,0.00006529034,0.0007292765],"domain_scores_gemma":[0.993513,0.0015318026,0.0012846624,0.003552195,0.000096298725,0.000022031147],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014520498,0.000793448,0.0064433566,0.0011426687,0.00047296393,0.000078436125,0.0018223549,0.0011301343,0.00043130602],"category_scores_gemma":[0.0011180572,0.00047917478,0.0018378368,0.0019251985,0.00044817448,0.00015818256,0.001060633,0.0010457572,0.00003719215],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071630144,0.0003296307,0.0006730954,0.0018238433,0.84949285,0.000040487565,0.00030735033,0.000013955124,0.0043526674,0.0001013416,0.00057682866,0.14157164],"study_design_scores_gemma":[0.0010600757,0.00058033754,0.00046522584,0.0014523317,0.41605338,0.00011133873,0.00013383299,0.0000025725808,0.0017484382,0.0000053279364,0.57777494,0.00061221235],"about_ca_topic_score_codex":0.00022951196,"about_ca_topic_score_gemma":0.00006113642,"teacher_disagreement_score":0.5771981,"about_ca_system_score_codex":0.000073184536,"about_ca_system_score_gemma":0.00023329389,"threshold_uncertainty_score":0.999766},"labels":[],"label_agreement":null},{"id":"W3179316687","doi":"10.1136/sextrans-2021-sti.446","title":"P424 Rapidly rising epidemic of African plasmid/blaTEM-1 in penicillinase-producing Neisseria gonorrhoeae from Guangdong, China","year":2021,"lang":"en","type":"article","venue":"Poster presentations","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plasmid; Neisseria gonorrhoeae; Microbiology; Biology; Multilocus sequence typing; Typing; Tetracycline; Virology; Gene; Genotype; Genetics; Antibiotics","score_opus":0.02192243172512472,"score_gpt":0.28047375636008687,"score_spread":0.25855132463496217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179316687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994629,0.0012782783,0.00012815736,0.0009964044,0.0012067885,0.00019286259,0.00017612036,0.000041777148,0.0013505967],"genre_scores_gemma":[0.99809426,0.00007153428,0.00022343357,0.00004491899,0.00008194319,0.000025314826,0.0005344413,0.00001908373,0.0009050463],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99852645,0.00033321252,0.0005129384,0.00035787147,0.000010747714,0.00025879126],"domain_scores_gemma":[0.99904317,0.0002825098,0.00017079101,0.00038258857,0.00009819889,0.000022726972],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015701912,0.000154083,0.0003212871,0.00015823783,0.00013790795,0.00003069124,0.0001330608,0.00013712962,0.0015050041],"category_scores_gemma":[0.00021955393,0.00015430985,0.000102850056,0.00032914281,0.000058508154,0.00022592193,0.000110269546,0.00023171598,0.000110041074],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000806651,0.00017149,0.10369338,0.000017945196,0.000135861,0.0000016016902,0.0028828932,0.00011786271,0.89058006,0.00012719863,0.0011048674,0.001086167],"study_design_scores_gemma":[0.0014880442,0.00006125025,0.7105122,0.00008093491,0.000093566974,0.000046519264,0.0011523272,0.00004057004,0.28115296,0.0006502963,0.004479787,0.00024153155],"about_ca_topic_score_codex":0.006332007,"about_ca_topic_score_gemma":0.0019953426,"teacher_disagreement_score":0.6094271,"about_ca_system_score_codex":0.000028586219,"about_ca_system_score_gemma":0.00008019938,"threshold_uncertainty_score":0.99940777},"labels":[],"label_agreement":null},{"id":"W3181854893","doi":"","title":"<i>Bordetella bronchiseptica</i>-reactive antibodies in Canadian polar bears.","year":2021,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Bordetella bronchiseptica; Bordetella; Biology; Microbiology; Antibody; Bacteria; Immunology; Bordetella pertussis","score_opus":0.011785779704924173,"score_gpt":0.21462075437673964,"score_spread":0.20283497467181547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181854893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9798216,0.0017471471,9.80123e-7,0.00077456166,0.0010945281,0.0001887762,0.00005061716,0.000028224187,0.016293531],"genre_scores_gemma":[0.996373,0.00010301037,0.000009915491,0.0001588962,0.00005116196,0.00011461281,0.00008545248,0.000010473501,0.0030935002],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990352,0.00009179759,0.00014663256,0.00020115764,0.0000074824848,0.00051773974],"domain_scores_gemma":[0.9996521,0.000045303528,0.000027598042,0.00016348482,0.000055071643,0.00005642547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001287639,0.00010103569,0.00017340976,0.00013413386,0.00010642338,0.000024245419,0.000068827874,0.00015226223,0.00047484276],"category_scores_gemma":[0.0001280173,0.00009973851,0.00004937488,0.00019384356,0.000047294478,0.00008323307,0.000034037763,0.00018087619,0.0001661134],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009000155,0.00033267622,0.654524,0.00002380277,0.0003781139,0.000066274646,0.0005437571,0.000003314901,0.20806001,0.0029410638,0.010491624,0.12254536],"study_design_scores_gemma":[0.0003543819,0.0000067679143,0.6864798,0.0000035985197,0.0000117478185,0.000046240904,0.00006227072,1.378815e-7,0.030860936,0.000059919785,0.28201443,0.000099766265],"about_ca_topic_score_codex":0.17698956,"about_ca_topic_score_gemma":0.4728021,"teacher_disagreement_score":0.29581255,"about_ca_system_score_codex":0.00009508488,"about_ca_system_score_gemma":0.0001378342,"threshold_uncertainty_score":0.8284909},"labels":[],"label_agreement":null},{"id":"W3184707783","doi":"10.3201/eid2708.203566","title":"Modeling Immune Evasion and Vaccine Limitations by Targeted Nasopharyngeal <i>Bordetella pertussis</i> Inoculation in Mice","year":2021,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Deafness and Other Communication Disorders; National Institutes of Health; National Institute of General Medical Sciences; University of Georgia","keywords":"Bordetella pertussis; Immune system; Colonization; Immunity; Immunology; Biology; Pneumonia; Respiratory tract; Immunization; Evasion (ethics); Virology; Microbiology; Medicine; Respiratory system; Bacteria; Internal medicine","score_opus":0.01089325494308313,"score_gpt":0.2357992728791004,"score_spread":0.22490601793601728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3184707783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9763042,0.021674175,0.00040257195,0.00034167286,0.00076916587,0.00014885407,0.000043164917,0.00014677994,0.00016944532],"genre_scores_gemma":[0.99696106,0.0019196323,0.000020278994,0.0000875258,0.00005745289,0.000039139246,0.0007148911,0.000023391725,0.00017661476],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988415,0.00018385038,0.0003534877,0.0003405567,0.00002195765,0.0002586123],"domain_scores_gemma":[0.9994815,0.00012074977,0.00006638254,0.00015655217,0.00013815294,0.000036658334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008109423,0.00018977764,0.00026041365,0.00016404859,0.0003469413,0.00004577665,0.000047945305,0.0001353944,0.00026583867],"category_scores_gemma":[0.00023143385,0.00019354017,0.00008108644,0.00035970364,0.000020510442,0.00023963285,0.00007000547,0.00017791847,0.000023843435],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088501154,0.00050073146,0.060202368,0.000047404166,0.00013799289,0.000004125224,0.0003443764,0.0037963798,0.9259437,0.000124445,0.0009912762,0.007818716],"study_design_scores_gemma":[0.02876162,0.0010816744,0.62683284,0.00092422083,0.0014963946,0.0007738828,0.0027172186,0.052410204,0.22122847,0.0025561983,0.057331584,0.0038856799],"about_ca_topic_score_codex":0.00052902556,"about_ca_topic_score_gemma":0.00033451835,"teacher_disagreement_score":0.7047152,"about_ca_system_score_codex":0.000049950595,"about_ca_system_score_gemma":0.000054879434,"threshold_uncertainty_score":0.7892339},"labels":[],"label_agreement":null},{"id":"W3185330071","doi":"10.3390/pathogens10070906","title":"Exploring the Ability of Meningococcal Vaccines to Elicit Mucosal Immunity: Insights from Humans and Mice","year":2021,"lang":"en","type":"review","venue":"Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Neisseria meningitidis; Meningococcal vaccine; Immunology; Colonization; Immunity; Immune system; Herd immunity; Immunization; Medicine; Meningococcal disease; Disease; Vaccination; Biology; Microbiology; Bacteria; Internal medicine","score_opus":0.09857439337074592,"score_gpt":0.30783927532967387,"score_spread":0.20926488195892795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185330071","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33444706,0.664014,0.000008647067,0.000018345914,0.00090220396,0.0003300168,0.00020053211,0.000025756251,0.000053419462],"genre_scores_gemma":[0.01019874,0.9888844,0.00004953485,0.0000152347175,0.00020088023,0.00021692908,0.0003530763,0.000034184246,0.000047056637],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99805486,0.00069242326,0.00059891026,0.0004138525,0.000017233115,0.00022269011],"domain_scores_gemma":[0.99843144,0.0005984651,0.00020838279,0.0006139289,0.0001188609,0.000028931936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019459342,0.00034264344,0.0013271656,0.0001216344,0.00028815615,0.00002907476,0.0002651405,0.00025806355,0.00020310981],"category_scores_gemma":[0.00016729733,0.00022182304,0.0003082322,0.00027929,0.000046622663,0.00006992969,0.0003778237,0.00043200128,0.00005206637],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024184537,0.00017970185,0.000108674314,0.0013107386,0.0010142085,0.0000031831614,0.0018642579,2.846284e-7,0.3176029,0.0004936468,0.00018633936,0.6772119],"study_design_scores_gemma":[0.00018442418,0.000070810915,0.0021616153,0.0014318303,0.000763563,0.000034909503,0.00022904172,5.980348e-8,0.0013013042,0.000026398104,0.9935304,0.00026565985],"about_ca_topic_score_codex":0.0007372285,"about_ca_topic_score_gemma":0.00021793785,"teacher_disagreement_score":0.99334407,"about_ca_system_score_codex":0.000029575129,"about_ca_system_score_gemma":0.00007469723,"threshold_uncertainty_score":0.90456814},"labels":[],"label_agreement":null},{"id":"W3187537443","doi":"10.1007/s40121-021-00499-3","title":"Meningococcal Disease Outbreaks: A Moving Target and a Case for Routine Preventative Vaccination","year":2021,"lang":"en","type":"review","venue":"Infectious Diseases and Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"GlaxoSmithKline Biologicals","keywords":"Outbreak; Medicine; Vaccination; Population; Disease; Environmental health; Psychological intervention; Pace; Reimbursement; Health care; Immunology; Virology; Geography; Economic growth; Nursing","score_opus":0.02500354037605045,"score_gpt":0.3288175301125179,"score_spread":0.30381398973646745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187537443","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009418219,0.98718494,0.00019485774,0.000025917912,0.00061648147,0.0014305082,0.0010073263,0.000100179546,0.000021538024],"genre_scores_gemma":[0.0146355815,0.98312175,0.000014188736,0.00003313358,0.00021030367,0.00091225444,0.0008567623,0.0000529643,0.00016305593],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984778,0.0003252327,0.0003954275,0.00051757134,0.000013809709,0.0002701709],"domain_scores_gemma":[0.9990291,0.00035034984,0.00026580848,0.00019505926,0.00006686501,0.00009281063],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000112264664,0.00042563886,0.0010234425,0.00015210117,0.00046234814,0.00012035597,0.000049753377,0.00023852868,0.0002638664],"category_scores_gemma":[0.00008736074,0.0003356194,0.00036514903,0.0001413462,0.00004940727,0.00013249123,0.000070960574,0.00017374764,0.0000035177654],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098343015,0.0003799346,0.0008662177,0.0021292728,0.0011484672,0.000042067204,0.00013311103,4.3747838e-7,0.000018220018,0.0008108913,0.00027093492,0.9941021],"study_design_scores_gemma":[0.0026142267,0.00037712825,0.00052950287,0.0012067369,0.0013400948,0.0017429537,0.000066212844,0.0000054407133,0.0000051817174,0.0005078005,0.99106926,0.000535489],"about_ca_topic_score_codex":0.000088353874,"about_ca_topic_score_gemma":0.0000129549935,"teacher_disagreement_score":0.99356663,"about_ca_system_score_codex":0.000042766507,"about_ca_system_score_gemma":0.00012347323,"threshold_uncertainty_score":0.9999096},"labels":[],"label_agreement":null},{"id":"W3191469104","doi":"10.1139/cjm-2021-0152","title":"Global population structure of <i>Haemophilus influenzae</i> serotype a (Hia) and emergence of invasive Hia disease: capsule switching or capsule replacement?","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Haemophilus influenzae; Biology; Multilocus sequence typing; Population; Serotype; Pasteurellaceae; Microbiology; clone (Java method); Virology; Genetics; Gene; Bacteria; Genotype; Medicine","score_opus":0.011416484684953912,"score_gpt":0.23750463383151535,"score_spread":0.22608814914656145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3191469104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920114,0.0055251443,0.000017562159,0.0002259499,0.0013910665,0.000100812475,0.00070817705,0.00000320349,0.000016658856],"genre_scores_gemma":[0.99936104,0.0001536136,0.000113928756,0.00010784468,0.00005678313,6.522993e-7,0.00014165121,0.00000829569,0.000056198973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987586,0.0001900598,0.0006002072,0.00018364226,0.000010976214,0.0002565026],"domain_scores_gemma":[0.9987502,0.000031143976,0.00051685795,0.00018919379,0.00039521756,0.000117372874],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011264802,0.00015272357,0.00043469475,0.00013621332,0.00012517071,0.000009183471,0.00013994492,0.00022289097,0.0009846583],"category_scores_gemma":[0.00028905642,0.0001295036,0.00008676822,0.00022693693,0.00011366191,0.00010299212,0.000040457628,0.00017708569,0.000002343837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018687037,0.000018467781,0.07470209,0.00005734505,0.0002048877,0.000020119958,0.00016325127,0.000042301188,0.92188644,0.0001873647,0.002236572,0.00029428492],"study_design_scores_gemma":[0.005151505,0.0011573863,0.4626106,0.00060726743,0.00058816577,0.00858827,0.0011253596,0.0000023712273,0.50360614,0.0014900407,0.01441638,0.00065650715],"about_ca_topic_score_codex":0.0073681627,"about_ca_topic_score_gemma":0.07139086,"teacher_disagreement_score":0.41828027,"about_ca_system_score_codex":0.00006197463,"about_ca_system_score_gemma":0.0011617125,"threshold_uncertainty_score":0.9999286},"labels":[],"label_agreement":null},{"id":"W3194349084","doi":"10.17269/s41997-021-00536-1","title":"Exploring the reasons for low pertussis vaccine effectiveness in Ontario, Canada, 2006–2008: a Canadian Immunization Research Network study","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Manitoba; Alberta Health; University of Alberta; University of Calgary; Institute for Clinical Evaluative Sciences; Canadian Blood Services; University of Toronto; Public Health Ontario","funders":"Canadian Institutes of Health Research; Canadian Immunization Research Network","keywords":"Immunization; Pertussis vaccine; Medicine; Virology; Family medicine; Immunology; Antibody","score_opus":0.1408683245604948,"score_gpt":0.3164292396865348,"score_spread":0.17556091512604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194349084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9813324,0.0017136077,0.000048567166,0.013603852,0.002637295,0.0005333024,0.00005012691,0.0000027463223,0.000078052835],"genre_scores_gemma":[0.9989533,0.000059512953,0.000014999733,0.00027316777,0.00017746398,0.00006471954,0.00006455296,0.000018450268,0.000373867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996058,0.0019914687,0.00049516436,0.00017980563,0.000043459524,0.001232135],"domain_scores_gemma":[0.99755,0.0005390539,0.00014013474,0.00027366317,0.00095733604,0.00053981296],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0059248707,0.00012728295,0.00036577616,0.0005066317,0.0013786335,0.000103630475,0.00027109325,0.000080487116,0.00041601158],"category_scores_gemma":[0.0010752836,0.00010317038,0.00005819164,0.0009566587,0.000031466287,0.0002240745,0.000020447469,0.00081069575,0.0000026449907],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.000058558344,0.00013519677,0.92822075,0.000037727426,0.00032360735,0.000077954726,0.004252711,0.0002921276,0.00015848463,0.00090096745,0.05141573,0.014126188],"study_design_scores_gemma":[0.0008880009,0.00024601255,0.7647281,0.00008896649,0.000007768427,0.0001411416,0.0032567254,0.0000018801375,0.000016247957,0.000020909305,0.23052357,0.00008061729],"about_ca_topic_score_codex":0.99986815,"about_ca_topic_score_gemma":0.9999994,"teacher_disagreement_score":0.17910784,"about_ca_system_score_codex":0.0048638284,"about_ca_system_score_gemma":0.09027568,"threshold_uncertainty_score":0.99992144},"labels":[],"label_agreement":null},{"id":"W3194990160","doi":"10.1128/msphere.00650-21","title":"RNase III and RNase E Influence Posttranscriptional Regulatory Networks Involved in Virulence Factor Production, Metabolism, and Regulatory RNA Processing in Bordetella pertussis","year":2021,"lang":"en","type":"article","venue":"mSphere","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Simon Fraser University; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; RNase P; Transcriptome; Bordetella pertussis; Virulence; Gene; RNA; Genetics; Regulon; Gene expression; Bacteria","score_opus":0.010566732104830986,"score_gpt":0.2241794983451713,"score_spread":0.2136127662403403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194990160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9684984,0.030464485,0.00001716379,0.00031072996,0.0004568715,0.00016707121,0.00001160255,0.000039583952,0.000034061064],"genre_scores_gemma":[0.9981042,0.0010680386,0.000081669736,0.000118499476,0.00007984237,0.000026586367,0.000026832156,0.000017572522,0.00047676958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986618,0.00017783209,0.00036508564,0.00048184322,0.0000278637,0.0002855627],"domain_scores_gemma":[0.99948496,0.000030079857,0.00009217057,0.00021446966,0.0001391542,0.000039166916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001816,0.00020471192,0.00030413957,0.000085859465,0.00019146601,0.0000511672,0.00006950722,0.00026376403,0.00023706724],"category_scores_gemma":[0.0000820578,0.00019540834,0.000034524404,0.0003210143,0.00018620721,0.00040766643,0.00006024833,0.00033961653,0.0000035171577],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016891808,0.00013142609,0.06649191,0.00006985496,0.000027787706,0.000008834071,0.00063162274,0.00018403481,0.91713196,0.00015396444,0.00015509805,0.014844593],"study_design_scores_gemma":[0.0014791256,0.00003099511,0.9450916,0.00023501817,0.00002874224,0.000105279614,0.00051935815,0.00006714719,0.04606677,0.00011774434,0.005945039,0.00031318355],"about_ca_topic_score_codex":0.00030386992,"about_ca_topic_score_gemma":0.0017462823,"teacher_disagreement_score":0.8785997,"about_ca_system_score_codex":0.000039588216,"about_ca_system_score_gemma":0.0001320219,"threshold_uncertainty_score":0.7968521},"labels":[],"label_agreement":null},{"id":"W3196932605","doi":"10.1007/s10719-021-10020-0","title":"Cross-reactivity of Haemophilus influenzae type a and b polysaccharides: molecular modeling and conjugate immunogenicity studies","year":2021,"lang":"en","type":"article","venue":"Glycoconjugate Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"University of Capetown","keywords":"Serotype; Immunogenicity; Haemophilus influenzae; Microbiology; Conjugate vaccine; Polysaccharide; Virology; Biology; Conjugate; Antibody; Immunology; Antibiotics; Biochemistry","score_opus":0.03149834264490771,"score_gpt":0.30962067965653883,"score_spread":0.27812233701163114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196932605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9669383,0.0318437,0.00010214052,0.00017153249,0.0007691579,0.00008409052,0.000018954692,0.000020341009,0.00005173678],"genre_scores_gemma":[0.9949135,0.004718242,0.00010628406,0.00008721869,0.000049749447,0.0000028174393,0.0000057579787,0.000014560773,0.000101849524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884444,0.00016970819,0.0004615381,0.00023595513,0.000025581123,0.0002627982],"domain_scores_gemma":[0.99875915,0.00009656221,0.00021384297,0.00018142101,0.00070659246,0.000042423097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037313165,0.0001914155,0.00046707303,0.00009099244,0.00035076015,0.00008566401,0.00007518174,0.00016856744,0.00012646223],"category_scores_gemma":[0.0003811561,0.00016484226,0.00007876878,0.00015696912,0.0002184119,0.00028224976,0.00018852523,0.00039141797,0.000008766548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030243924,0.00005543838,0.0041997903,0.000034829594,0.0006250866,0.000025137579,0.0003279265,0.00008516803,0.9918972,0.00023914545,0.000020537851,0.0021872595],"study_design_scores_gemma":[0.004588322,0.00047578634,0.0077827103,0.00022852814,0.0003400466,0.008915655,0.0008158901,0.00019094668,0.9702282,0.0030496877,0.0029071542,0.0004771023],"about_ca_topic_score_codex":0.00015051909,"about_ca_topic_score_gemma":0.000021577867,"teacher_disagreement_score":0.027975174,"about_ca_system_score_codex":0.000025435014,"about_ca_system_score_gemma":0.00012279986,"threshold_uncertainty_score":0.67220724},"labels":[],"label_agreement":null},{"id":"W3198125555","doi":"10.1503/cmaj.202420-f","title":"Immunisation durant la grossesse avec le vaccin DCaT","year":2021,"lang":"fr","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Gynecology; Medicine; Humanities; Art","score_opus":0.00611771965832875,"score_gpt":0.22464951701212132,"score_spread":0.21853179735379258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198125555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7250617,0.014760281,0.00023046954,0.23379911,0.019427339,0.00009492473,0.00013192734,0.00002678578,0.0064674416],"genre_scores_gemma":[0.93702304,0.00812662,0.00008120523,0.0045986245,0.004168777,0.000009035849,0.00022682369,0.000041380827,0.04572447],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99679166,0.0015632081,0.00063665555,0.00021133722,0.00012503409,0.00067210104],"domain_scores_gemma":[0.99779993,0.0004028303,0.00031698015,0.0001662617,0.0007784225,0.0005355755],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0018396832,0.00019103214,0.00034530918,0.00016091553,0.00093076745,0.00025928055,0.00019931185,0.0015508024,0.041244205],"category_scores_gemma":[0.00216464,0.00020559257,0.00020831388,0.00032314842,0.000075304066,0.00029936145,0.00003896915,0.0018312766,0.001099079],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060122435,0.000759332,0.03517796,0.00009560568,0.002246735,0.003217196,0.0032047215,0.000014568901,0.030980451,0.030313428,0.68276983,0.21116002],"study_design_scores_gemma":[0.0017138994,0.000039055893,0.055611324,0.00016356821,0.000075947595,0.014867606,0.00086084433,0.0000181101,0.0011088395,0.00048376652,0.9248409,0.00021610709],"about_ca_topic_score_codex":0.016955577,"about_ca_topic_score_gemma":0.07553185,"teacher_disagreement_score":0.24207108,"about_ca_system_score_codex":0.0009340707,"about_ca_system_score_gemma":0.008750059,"threshold_uncertainty_score":0.99974537},"labels":[],"label_agreement":null},{"id":"W3198241874","doi":"10.1016/j.vacun.2021.07.002","title":"Avances recientes en la prevención de la enfermedad meningocócica B: evidencia real de la vacunación con 4CMenB","year":2021,"lang":"es","type":"article","venue":"Vacunas","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec","funders":"","keywords":"Humanities; Medicine; Philosophy","score_opus":0.010832300671860156,"score_gpt":0.3108911622937857,"score_spread":0.3000588616219256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198241874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96734685,0.007943025,0.00010555757,0.0005871914,0.0011525583,0.00021095591,0.00011169393,0.00015500915,0.022387182],"genre_scores_gemma":[0.9717658,0.019291794,0.00058882876,0.00012781905,0.000452995,0.0000733221,0.00009391552,0.00005314084,0.007552363],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9934654,0.004585294,0.00053251785,0.0006299878,0.000050484156,0.00073630747],"domain_scores_gemma":[0.9955246,0.0034562142,0.00024103613,0.0004965642,0.00017774732,0.00010387471],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018218037,0.00042658526,0.00060974347,0.00015609253,0.00045379167,0.00026272127,0.00035664003,0.0011377198,0.002275657],"category_scores_gemma":[0.0010822769,0.0004064571,0.00026665407,0.00035529662,0.00039570252,0.00023695186,0.000285661,0.00083651085,0.0003000898],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020493605,0.00048775473,0.067141846,0.00013178078,0.0005716215,0.00008554929,0.0019000467,0.00000627799,0.8925051,0.019368343,0.009869668,0.007727093],"study_design_scores_gemma":[0.0014868552,0.00030833404,0.18476793,0.0005246071,0.00036453624,0.0014131631,0.0005942153,0.000012182021,0.20770939,0.0021984926,0.6000932,0.0005271049],"about_ca_topic_score_codex":0.000670926,"about_ca_topic_score_gemma":0.00007884315,"teacher_disagreement_score":0.6847957,"about_ca_system_score_codex":0.00020675291,"about_ca_system_score_gemma":0.0008449307,"threshold_uncertainty_score":0.9998387},"labels":[],"label_agreement":null},{"id":"W3198683762","doi":"10.26685/urncst.281","title":"Combating Antimicrobial Resistance: Assessing Efflux Pump Deficient Environments in Neisseria gonorrhoeae and the Masking Effect on Antimicrobial-Resistant Mutations","year":2021,"lang":"en","type":"article","venue":"Undergraduate Research in Natural and Clinical Science and Technology (URNCST) Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Efflux; Neisseria gonorrhoeae; Azithromycin; Antibiotic resistance; Microbiology; Drug resistance; Biology; CRISPR; Antimicrobial; Multiple drug resistance; Antibiotics; Genetics; Gene","score_opus":0.02767803509688955,"score_gpt":0.36138512585845756,"score_spread":0.333707090761568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198683762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9734115,0.0016747232,0.000010795753,0.023905067,0.0005645962,0.0002566633,0.0000031782258,0.000015184023,0.00015831151],"genre_scores_gemma":[0.9967392,0.0028595452,0.000094986644,0.00010307222,0.000039768198,0.00000844862,0.0000047947615,0.0000085370175,0.00014165282],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99679315,0.0011182684,0.0006709484,0.00058903464,0.000084586245,0.00074403576],"domain_scores_gemma":[0.9975841,0.0017861937,0.00018554935,0.00021078225,0.0001656154,0.00006778124],"candidate_categories":["sts","research_integrity"],"consensus_categories":["sts"],"category_scores_codex":[0.0069812434,0.00019486083,0.0004436496,0.00064520113,0.001917282,0.00044075082,0.0002966725,0.00030353724,0.000010864721],"category_scores_gemma":[0.002195003,0.00012419542,0.000058230497,0.0016379874,0.0037872691,0.00030786495,0.00043898594,0.0025010626,0.000008712724],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075288245,0.000449578,0.0870558,0.000059743114,0.00009311698,0.000060662547,0.00011237726,0.000009386308,0.8668977,0.012544101,0.0001903295,0.031774316],"study_design_scores_gemma":[0.05216965,0.0032734377,0.6651794,0.005356722,0.00025120654,0.0064491145,0.004800331,0.0012468037,0.16169228,0.08315728,0.01443039,0.0019934352],"about_ca_topic_score_codex":0.000059397247,"about_ca_topic_score_gemma":0.00032102357,"teacher_disagreement_score":0.70520544,"about_ca_system_score_codex":0.00015018691,"about_ca_system_score_gemma":0.0002440728,"threshold_uncertainty_score":0.9998002},"labels":[],"label_agreement":null},{"id":"W3202734911","doi":"10.1128/spectrum.00803-21","title":"Increased Incidence of Invasive Haemophilus influenzae Disease Driven by Non-Type B Isolates in Ontario, Canada, 2014 to 2018","year":2021,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institute for Clinical Evaluative Sciences; Public Health Agency of Canada; University of Toronto; Public Health Ontario","funders":"","keywords":"Haemophilus influenzae; Serotype; Incidence (geometry); Ampicillin; Population; Microbiology; Medicine; Amp resistance; Antibiotic resistance; Antibiotics; Biology; Environmental health","score_opus":0.006316015849380365,"score_gpt":0.2059423603678909,"score_spread":0.19962634451851055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202734911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99582195,0.0009876235,0.000006863629,0.0011962398,0.0012929697,0.00025588946,0.00031355204,0.000019032668,0.00010586275],"genre_scores_gemma":[0.9967759,0.00005465987,0.000038118207,0.0008821666,0.000027526103,0.000015714631,0.00076609355,0.00001748912,0.0014223222],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833703,0.00019004509,0.00047475618,0.00048861094,0.000010319614,0.00049922446],"domain_scores_gemma":[0.9990814,0.00014894312,0.0001472252,0.0004229388,0.00012157151,0.00007792579],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010125915,0.00026004406,0.00052077515,0.00014152021,0.00011360913,0.000010698867,0.00026208058,0.00025832848,0.0029315366],"category_scores_gemma":[0.00015137701,0.0002569638,0.00007168165,0.00027698715,0.00012990776,0.00007459258,0.00023921404,0.00035319326,0.00022233844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002331421,0.00009810479,0.24151087,0.000009686816,0.00007959078,0.000017438639,0.00008703004,0.000014423325,0.70181453,0.00002064741,0.056105055,0.00000950075],"study_design_scores_gemma":[0.0011898124,0.0002535817,0.39770544,0.000078528545,0.000046340498,0.00012800025,0.00004689179,6.904661e-7,0.54374605,0.000074439675,0.056377962,0.00035222503],"about_ca_topic_score_codex":0.9310822,"about_ca_topic_score_gemma":0.9945225,"teacher_disagreement_score":0.15806843,"about_ca_system_score_codex":0.00036126672,"about_ca_system_score_gemma":0.0021380482,"threshold_uncertainty_score":0.99998826},"labels":[],"label_agreement":null},{"id":"W3203248732","doi":"10.11622/smedj.2021123","title":"Diagnostic value of cerebrospinal fluid levels of D-lactate, tumour necrosis factor-alpha and interleukin-6, -8, and -17 in suspected nosocomial meningitis","year":2021,"lang":"en","type":"article","venue":"Singapore Medical Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Meningitis; Pleocytosis; Cerebrospinal fluid; Gastroenterology; Receiver operating characteristic; Internal medicine; CSF pleocytosis; Surgery","score_opus":0.01365183803783,"score_gpt":0.2618623656310977,"score_spread":0.24821052759326773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203248732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968151,0.0014951511,0.00008779149,0.0005694004,0.0007885497,0.000065961794,0.000053996573,0.000009439526,0.00011460552],"genre_scores_gemma":[0.99920815,0.00040780075,0.00012201241,0.000031841264,0.000106632506,0.0000018121015,0.000014830119,0.000011772803,0.00009515019],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99858946,0.0002464934,0.00064556574,0.00019271781,0.00006495088,0.0002608291],"domain_scores_gemma":[0.9989254,0.0004907925,0.00023203836,0.00008859191,0.00017205572,0.00009110898],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032435718,0.000157083,0.0004910843,0.00014536333,0.00011692891,0.000030463954,0.00010220053,0.00025161778,0.0019029948],"category_scores_gemma":[0.0015344026,0.0001315106,0.000076663106,0.00016647577,0.0003053268,0.00010614034,0.000121975754,0.00057622546,0.0000016893011],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013910107,0.00020508435,0.083345115,0.000047223704,0.00014568155,0.00009642528,0.0008184897,7.226066e-7,0.90369767,0.00020040268,0.000465563,0.010838545],"study_design_scores_gemma":[0.0033361975,0.00049664045,0.7812323,0.00070369296,0.000060251426,0.0044507855,0.00026825024,0.0000081273165,0.20805426,0.0004396875,0.0007822495,0.00016754401],"about_ca_topic_score_codex":0.00019963853,"about_ca_topic_score_gemma":0.00014930012,"teacher_disagreement_score":0.6978872,"about_ca_system_score_codex":0.000045297747,"about_ca_system_score_gemma":0.00035316971,"threshold_uncertainty_score":0.99900943},"labels":[],"label_agreement":null},{"id":"W3203619011","doi":"10.1016/j.vaccine.2021.09.022","title":"Factors affecting antibody responses to immunizations in infants born to women immunized against pertussis in pregnancy and unimmunized women: Individual-Participant Data Meta-analysis","year":2021,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"GlaxoSmithKline","keywords":"Tetanus; Toxoid; Immunization; Booster dose; Medicine; Diphtheria; Pertactin; Bordetella pertussis; Pregnancy; Immunology; Vaccination; Antibody; Pertussis toxin; Internal medicine; Biology","score_opus":0.20316219232119723,"score_gpt":0.39916043590004563,"score_spread":0.1959982435788484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203619011","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31841886,0.6791577,0.0000086655,0.0000751147,0.00022270075,0.0011428298,0.00091029366,0.000054744574,0.0000091150605],"genre_scores_gemma":[0.04765741,0.9436308,0.00014120973,0.00007273753,0.000022194854,0.0005203645,0.007171903,0.00010507533,0.0006783182],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.99256915,0.0032432743,0.0018542124,0.0011854455,0.000060737257,0.0010871931],"domain_scores_gemma":[0.9949904,0.0016286313,0.00052424613,0.0025836434,0.00013434827,0.0001387165],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019555385,0.0009000757,0.0067045246,0.0033745412,0.00033506195,0.00018608231,0.001025849,0.0006036586,0.0012807321],"category_scores_gemma":[0.0022678566,0.000677251,0.00054624554,0.0065088533,0.000021305079,0.0003193708,0.0024658623,0.00083575945,0.000039123417],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00105837,0.003605774,0.019715786,0.0050284504,0.6838805,0.00011807627,0.047792863,0.00012891178,0.013583659,0.000057856196,0.0006616149,0.22436814],"study_design_scores_gemma":[0.004167149,0.0005456902,0.05252528,0.0060994355,0.15237664,0.00004282952,0.006414015,0.0000042725637,0.00012843893,0.0000031854404,0.77520007,0.002492993],"about_ca_topic_score_codex":0.0008830961,"about_ca_topic_score_gemma":0.0010721998,"teacher_disagreement_score":0.77453846,"about_ca_system_score_codex":0.00018554438,"about_ca_system_score_gemma":0.00033843864,"threshold_uncertainty_score":0.99963224},"labels":[],"label_agreement":null},{"id":"W3204308800","doi":"10.3138/jammi-2020-0034","title":"Susceptibilities of invasive <i>Neisseria meningitidis</i> strains to agents used for prophylaxis and to penicillin G","year":2021,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Dalhousie University; Provincial Laboratory of Public Health; Public Health Agency of Canada","funders":"","keywords":"Neisseria meningitidis; Ciprofloxacin; Microbiology; Penicillin; Trimethoprim; Azithromycin; Sulfamethoxazole; Medicine; Minocycline; Antibiotics; Biology; Bacteria","score_opus":0.00781141202950224,"score_gpt":0.23496382326095264,"score_spread":0.22715241123145039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204308800","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938422,0.00038265705,0.000024283283,0.0040504457,0.0011852436,0.00018976786,0.0003120313,0.0000023348093,0.000011026375],"genre_scores_gemma":[0.99907476,0.00007042253,0.000014394031,0.0005298879,0.000053981294,0.000005521169,0.000017635126,0.0000053425447,0.00022806315],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990003,0.0002549378,0.0004400828,0.00011573362,0.000036552636,0.00015238384],"domain_scores_gemma":[0.9985271,0.0004254577,0.0003966059,0.00009100501,0.00045901805,0.00010081651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004854511,0.00009294326,0.00033885133,0.0000562458,0.000113442766,0.0000071888753,0.00011026042,0.00016360593,0.00013990211],"category_scores_gemma":[0.003289457,0.00006766681,0.000093040915,0.00011551226,0.00006214988,0.000034573495,0.00008164078,0.00015481276,3.1814793e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020246812,0.00015872538,0.16172232,0.0001345213,0.00057943136,0.0000019343702,0.00040762292,0.00001475518,0.8134783,0.0003860336,0.022300828,0.00061304576],"study_design_scores_gemma":[0.007768085,0.002519399,0.5649263,0.0006656346,0.00065997714,0.00029695965,0.0016292369,0.0000016679417,0.31791118,0.0008982533,0.10224657,0.00047672176],"about_ca_topic_score_codex":0.005476853,"about_ca_topic_score_gemma":0.11160526,"teacher_disagreement_score":0.49556714,"about_ca_system_score_codex":0.00012402755,"about_ca_system_score_gemma":0.0012591991,"threshold_uncertainty_score":0.9046056},"labels":[],"label_agreement":null},{"id":"W3205502112","doi":"10.21203/rs.3.rs-966673/v1","title":"A Refined, Controlled 16S RRNA Gene Sequencing Approach Reveals Limited Detection of Cerebrospinal Fluid Microbiota in Children with Bacterial Meningitis","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"16S ribosomal RNA; Bacterial meningitis; Cerebrospinal fluid; Microbiology; Meningitis; Gene; Biology; Bacteria; Ribosomal RNA; Computational biology; Genetics; Medicine; Neuroscience; Pediatrics","score_opus":0.03348443051042197,"score_gpt":0.29731070223380346,"score_spread":0.26382627172338147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3205502112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944672,0.0020716046,0.00017238669,0.000052027313,0.00049818866,0.0021806231,0.00030811466,0.000065632834,0.00018423154],"genre_scores_gemma":[0.99556303,0.00045561645,0.00044948395,0.0000041502653,0.00025013677,0.00047451464,0.0023948413,0.00006209722,0.0003461392],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954053,0.001823038,0.00088933134,0.0009633335,0.00010992623,0.0008090299],"domain_scores_gemma":[0.997655,0.00017512096,0.00037367985,0.0008179421,0.0009221583,0.000056108624],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015337825,0.00044528622,0.001325571,0.0009074766,0.0002947901,0.00015964048,0.00039076136,0.0010770003,0.0004049915],"category_scores_gemma":[0.00036311534,0.0003800742,0.00028076355,0.0007492423,0.0002340642,0.00012021114,0.0007055429,0.0018845706,0.000016371896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039939526,0.00029230482,0.008258896,0.000295984,0.0008104461,0.000005193942,0.00023608275,0.000081471706,0.9853537,0.000015505384,0.000063675245,0.00059279613],"study_design_scores_gemma":[0.018764839,0.0021829961,0.18363328,0.0019160424,0.00020627247,0.0009192009,0.0006155175,0.00005220364,0.7905774,0.000031871452,0.00026452114,0.00083583564],"about_ca_topic_score_codex":0.0045768716,"about_ca_topic_score_gemma":0.0005384083,"teacher_disagreement_score":0.19477628,"about_ca_system_score_codex":0.00046579546,"about_ca_system_score_gemma":0.0006372809,"threshold_uncertainty_score":0.9998651},"labels":[],"label_agreement":null},{"id":"W3207388809","doi":"10.1101/2021.10.15.464623","title":"Characterisation of the phase-variable autotransporter Lav reveals a role in host cell adherence and biofilm formation in Non-Typeable <i>Haemophilus influenzae</i>","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; National Institutes of Health; Medical Research Council; Children's Health Foundation","keywords":"Phase variation; Haemophilus influenzae; Biology; Microbiology; Haemophilus; Gene; Pasteurellaceae; Biofilm; Phenotype; Locus (genetics); Variable number tandem repeat; Genome; Genetics; Lineage (genetic); Neisseria; Genotype; Bacteria","score_opus":0.009896530388432174,"score_gpt":0.21319907679247185,"score_spread":0.2033025464040397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207388809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99717396,0.000983664,0.00006157568,0.00004994178,0.00080698123,0.00066113914,0.0002120601,0.000036988164,0.000013712541],"genre_scores_gemma":[0.99923885,0.00030035598,0.00018524654,0.000070088165,0.00004122889,0.00012138571,0.000005469818,0.000028692495,0.000008660664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835354,0.00018656367,0.0006823125,0.00043433963,0.000034688448,0.0003085289],"domain_scores_gemma":[0.9987017,0.000036451565,0.0004734418,0.00056459615,0.00019802243,0.000025823269],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040728363,0.00029020561,0.00051226036,0.00021090006,0.00008597258,0.00006245702,0.00022507318,0.00061912485,0.00009978293],"category_scores_gemma":[0.000045329627,0.00026475947,0.00006939912,0.0004901803,0.00006904357,0.00030780947,0.00017859886,0.0005848662,0.000009966852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058058104,0.00023849873,0.026186267,0.00031630657,0.00002735131,0.0000018859541,0.00009279218,0.000014927129,0.97300744,0.000029797873,0.000023608176,0.0000030478045],"study_design_scores_gemma":[0.0013690729,0.00005186162,0.34900752,0.00058718753,0.0000383389,1.05893406e-7,0.0000131095085,0.00004307507,0.6480283,0.0000017250144,0.0006258337,0.0002338202],"about_ca_topic_score_codex":0.0009845649,"about_ca_topic_score_gemma":0.0000720577,"teacher_disagreement_score":0.32497913,"about_ca_system_score_codex":0.000091253685,"about_ca_system_score_gemma":0.00019789989,"threshold_uncertainty_score":0.99998045},"labels":[],"label_agreement":null},{"id":"W3208208486","doi":"10.3390/toxins13110763","title":"Design of a Quantitative LC-MS Method for Residual Toxins Adenylate Cyclase Toxin (ACT), Dermonecrotic Toxin (DNT) and Tracheal Cytotoxin (TCT) in Bordetella pertussis Vaccines","year":2021,"lang":"en","type":"article","venue":"Toxins","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bordetella pertussis; Toxin; Pertussis toxin; Bordetella; Microbiology; Cyclase; Adenylate kinase; Pertactin; Adenylate Cyclase Toxin; Chemistry; Biology; Bacteria; Biochemistry; Enzyme; G protein; Receptor","score_opus":0.03700216413932985,"score_gpt":0.31240449244341506,"score_spread":0.27540232830408523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208208486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9757342,0.003600706,0.017784983,0.0008534297,0.0004924634,0.0010240619,0.00022102705,0.00008184644,0.0002073124],"genre_scores_gemma":[0.96794325,0.00048375962,0.029474484,0.00015606097,0.000084201,0.00021400671,0.00013882475,0.00006994718,0.0014354402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970058,0.00074612023,0.0008635788,0.0007060555,0.000043659926,0.0006347358],"domain_scores_gemma":[0.99745095,0.0015709953,0.0002575515,0.00042080347,0.00022431178,0.00007537834],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008099519,0.0004195567,0.00092243677,0.00032960842,0.00024064448,0.000048274025,0.00019665237,0.00050156796,0.00061780005],"category_scores_gemma":[0.0007323912,0.0003887683,0.00017880896,0.0004415288,0.000111707486,0.00018375966,0.00012729106,0.00037185955,0.0000276625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011328096,0.0005407859,0.001133407,0.00011190305,0.00028615558,0.00001928198,0.0016719499,0.0001532808,0.9881761,0.0010326826,0.0009547226,0.0047868965],"study_design_scores_gemma":[0.0067537567,0.0015562946,0.024104428,0.00016501702,0.00027598813,0.00043601,0.0015225479,0.0010864221,0.9583707,0.0010307363,0.003954586,0.00074355584],"about_ca_topic_score_codex":0.0005363141,"about_ca_topic_score_gemma":0.0019240003,"teacher_disagreement_score":0.029805467,"about_ca_system_score_codex":0.00007921629,"about_ca_system_score_gemma":0.00023440794,"threshold_uncertainty_score":0.9998564},"labels":[],"label_agreement":null},{"id":"W3209028205","doi":"10.1097/inf.0000000000003367","title":"Pertussis Disease and Antenatal Vaccine Effectiveness in Australian Children","year":2021,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre","funders":"","keywords":"Pertussis vaccine; Disease; Whooping cough; Bordetella pertussis; Pregnancy; Population","score_opus":0.0058759685723392815,"score_gpt":0.22895467572379335,"score_spread":0.2230787071514541,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209028205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928355,0.0049375324,0.000021612213,0.0007394194,0.0011210423,0.0002011591,0.00006360007,0.00004331325,0.000036792342],"genre_scores_gemma":[0.99677235,0.0022305264,0.0000021210772,0.00006787367,0.0006262654,0.00002075317,0.000034898705,0.000018846631,0.00022639034],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998462,0.000595325,0.00029229047,0.0002534152,0.000031614272,0.00036532435],"domain_scores_gemma":[0.9991759,0.00020925475,0.00011711536,0.00022489525,0.00011699494,0.00015583266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035788128,0.00020865185,0.00024762793,0.00019771942,0.0005451776,0.000106923915,0.00011410752,0.00008921168,0.0005921619],"category_scores_gemma":[0.00032599087,0.00014247136,0.0001471335,0.0003906611,0.000044546003,0.00018881561,0.00010637647,0.0005258556,0.000058387483],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034519852,0.00030458407,0.9957746,0.000030194373,0.00012968348,0.000088267894,0.000046695055,0.000035125442,0.0017670938,0.000069991576,0.0007301023,0.00067841954],"study_design_scores_gemma":[0.002322125,0.00005811579,0.993532,0.000024668705,0.00040735753,0.002382463,0.000026701702,0.0000031827599,0.000112431044,0.00067432737,0.00026649536,0.00019015324],"about_ca_topic_score_codex":0.00009722328,"about_ca_topic_score_gemma":0.000036093992,"teacher_disagreement_score":0.0039367955,"about_ca_system_score_codex":0.000062375846,"about_ca_system_score_gemma":0.00022398238,"threshold_uncertainty_score":0.64837575},"labels":[],"label_agreement":null},{"id":"W3210308867","doi":"10.1073/pnas.2109364118","title":"The minor pilin PilV provides a conserved adhesion site throughout the antigenically variable meningococcal type IV pilus","year":2021,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Fondation pour la Recherche Médicale; Agence Nationale de la Recherche; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Pilin; Pilus; Neisseria meningitidis; Microbiology; Fimbriae Proteins; Biology; Neisseria; Adhesion; Bacteria; Chemistry; Genetics; Virulence; Gene","score_opus":0.041334257106948755,"score_gpt":0.3134104509021454,"score_spread":0.27207619379519665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210308867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98885065,0.0010768923,8.138643e-7,0.0077986466,0.00017953901,0.00019833108,0.000014055961,0.000014577838,0.0018664941],"genre_scores_gemma":[0.9979729,0.00013089846,0.0002664667,0.00025914723,0.000071162256,0.000012270453,6.7332974e-7,0.0000036871636,0.0012827942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990947,0.000043574386,0.0003401732,0.00021756279,0.00011600976,0.0001879506],"domain_scores_gemma":[0.99855924,0.0005181475,0.00032200504,0.00002048078,0.00056957226,0.000010540555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013828467,0.00009741173,0.00015570575,0.000033878703,0.0009721634,0.000057869795,0.00059047516,0.00012875757,0.00006609725],"category_scores_gemma":[0.0013477551,0.000044913962,0.00008011486,0.00063511357,0.0009606104,0.00021001491,0.00019428301,0.00023214845,0.000011298531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006304838,0.000047316677,0.006262004,0.000013797795,0.000042837313,3.0645515e-9,0.00012482185,0.000004238224,0.9610245,0.029853279,0.0023914548,0.00017266987],"study_design_scores_gemma":[0.00039053502,0.00013093819,0.06471703,0.000071385904,0.000042962172,0.00004544668,0.00030490034,0.00007653634,0.8933292,0.014048435,0.026741978,0.00010065518],"about_ca_topic_score_codex":0.000040210718,"about_ca_topic_score_gemma":0.0000017978595,"teacher_disagreement_score":0.067695335,"about_ca_system_score_codex":0.000016063428,"about_ca_system_score_gemma":0.00012226071,"threshold_uncertainty_score":0.7477193},"labels":[],"label_agreement":null},{"id":"W3211543068","doi":"10.1080/19490976.2021.1993583","title":"Bacterial membrane vesicles and phages in blood after consumption of <i>Lacticaseibacillus rhamnosus</i> JB-1","year":2021,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Natural Sciences and Engineering Research Council of Canada; W. Garfield Weston Foundation","keywords":"Biology; Bacteria; Microbiology; Immune system; Extracellular vesicle; Lipoteichoic acid; Lactobacillus rhamnosus; Vesicle; Cell biology; Innate immune system; Microvesicles; Bacterial outer membrane; Lipopolysaccharide; TLR2; Immunity; Immunology; Escherichia coli; Probiotic; Membrane; Biochemistry; Staphylococcus aureus","score_opus":0.010247458284371326,"score_gpt":0.22984467465800876,"score_spread":0.21959721637363744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211543068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99429375,0.004549388,0.000003821132,0.00016633309,0.00066594896,0.000094764524,0.00010881217,0.000023599729,0.0000935955],"genre_scores_gemma":[0.99806005,0.0012265738,0.00010397451,0.00004111,0.000060687882,0.000013573599,0.00009098588,0.000010878085,0.00039214361],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912226,0.00014182637,0.00028990756,0.0002382491,0.0000093081435,0.00019844527],"domain_scores_gemma":[0.9995879,0.00009345519,0.00007308887,0.00016895335,0.00006147338,0.00001513193],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010007725,0.00013763254,0.00028011404,0.00008638188,0.000053073967,0.00002415064,0.00004689465,0.00017610822,0.0023019563],"category_scores_gemma":[0.0000406497,0.00012992935,0.000052149997,0.00008146931,0.00013077912,0.000118266384,0.000078902485,0.00012033114,0.00007417445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021786614,0.00018135225,0.016373971,0.0000751056,0.00008812578,0.000014897908,0.00020507828,2.1000908e-7,0.9813465,0.00006880359,0.00017107352,0.0012570175],"study_design_scores_gemma":[0.0019579802,0.00006408724,0.066887476,0.000057171488,0.00007843092,0.00041250832,0.0000709673,1.10208674e-7,0.9176445,0.000025255811,0.012669231,0.00013229641],"about_ca_topic_score_codex":0.00014192262,"about_ca_topic_score_gemma":0.00030885127,"teacher_disagreement_score":0.06370201,"about_ca_system_score_codex":0.0000084123585,"about_ca_system_score_gemma":0.000035016663,"threshold_uncertainty_score":0.9986101},"labels":[],"label_agreement":null},{"id":"W3211742697","doi":"10.1097/gme.0000000000001867","title":"Select immunizations for adult women","year":2021,"lang":"en","type":"article","venue":"Menopause The Journal of The North American Menopause Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Advisory committee; Immunization; Vaccination; Immunization program; MEDLINE","score_opus":0.007209384178106618,"score_gpt":0.23222207503326808,"score_spread":0.22501269085516146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211742697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943647,0.000652948,0.0005040104,0.0029105542,0.0011903864,0.00023894508,0.000066136,0.000026054053,0.000046265784],"genre_scores_gemma":[0.99465287,0.0011901762,0.00038633807,0.0015226727,0.00021937446,0.000025234927,0.00001769147,0.000035693447,0.0019499258],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982828,0.0005265181,0.00054147764,0.00014166483,0.00005602653,0.00045152058],"domain_scores_gemma":[0.9971335,0.00038870398,0.0007638005,0.0005154318,0.0011538076,0.000044739343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061801774,0.0002124845,0.00042478315,0.00003153333,0.001003823,0.000042153875,0.0005905138,0.000064698805,0.00014633828],"category_scores_gemma":[0.00034766374,0.00011825742,0.00019873785,0.00085668324,0.00033774608,0.00012612778,0.00016429058,0.000502587,0.00001666793],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003043899,0.0003345162,0.0044638547,0.000022894761,0.0019640103,7.8673787e-7,0.0069676703,0.00023033799,0.9495741,0.00009578093,0.034165885,0.0018757422],"study_design_scores_gemma":[0.010874335,0.006298631,0.08440008,0.00017418197,0.0031633782,0.0030040361,0.033661045,0.000038801587,0.33221546,0.0007293986,0.5239889,0.0014517555],"about_ca_topic_score_codex":0.000083055274,"about_ca_topic_score_gemma":0.0001876149,"teacher_disagreement_score":0.6173587,"about_ca_system_score_codex":0.00016986494,"about_ca_system_score_gemma":0.00032265426,"threshold_uncertainty_score":0.7720697},"labels":[],"label_agreement":null},{"id":"W32120885","doi":"10.3390/ijms21051627","title":"Определение стационарной теплопроводности в прямом стержне прямоугольного сечения","year":2010,"lang":"en","type":"article","venue":"Известия Тульского государственного университета. Технические науки","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Computer science","score_opus":0.007908675932051376,"score_gpt":0.23429766600261123,"score_spread":0.22638899007055985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W32120885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9353426,0.0012760926,0.000486006,0.0024465742,0.019450102,0.0013883663,0.0003822043,0.0017676235,0.037460413],"genre_scores_gemma":[0.97264665,0.00021623148,0.0009527515,0.0011215386,0.0018543844,0.0003571356,0.0008597165,0.00033469728,0.021656899],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9921761,0.00059204805,0.0020151013,0.002227992,0.00025180084,0.0027369296],"domain_scores_gemma":[0.9943329,0.0006575513,0.00085426786,0.0029463645,0.0007387827,0.00047011898],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.0015012919,0.0016611791,0.0017771306,0.0009511173,0.0018825472,0.00043944042,0.0018396623,0.0021551235,0.028949386],"category_scores_gemma":[0.0006077542,0.0015608851,0.0010227859,0.0014096497,0.0010843903,0.0011143505,0.00081224047,0.0034920485,0.014271333],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046674683,0.0011319768,0.009114475,0.00009680851,0.0007008063,0.000040708466,0.00069624477,0.000011501529,0.8734661,0.01383774,0.06994727,0.030489618],"study_design_scores_gemma":[0.0059112334,0.0006318583,0.034282297,0.00013456744,0.00040949933,0.0012923877,0.00045440646,0.000042517393,0.18427025,0.002819313,0.7672408,0.002510845],"about_ca_topic_score_codex":0.002075446,"about_ca_topic_score_gemma":0.0031600315,"teacher_disagreement_score":0.6972936,"about_ca_system_score_codex":0.0001825783,"about_ca_system_score_gemma":0.00048806495,"threshold_uncertainty_score":0.9996135},"labels":[],"label_agreement":null},{"id":"W3212711960","doi":"10.1016/j.idcr.2021.e01335","title":"Atypical presentation of a methicillin-resistant Staphylococcus aureus brain abscess","year":2021,"lang":"en","type":"article","venue":"IDCases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Staphylococcus aureus; Presentation (obstetrics); Brain abscess; Methicillin-resistant Staphylococcus aureus; Abscess; Staphylococcal infections; Microbiology; Surgery; Bacteria","score_opus":0.028257734363660452,"score_gpt":0.30367924640455757,"score_spread":0.2754215120408971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212711960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955338,0.002298293,0.00021121878,0.00070842396,0.0006066198,0.00008286606,0.00009223035,0.00003423921,0.00043226097],"genre_scores_gemma":[0.99855494,0.000038314894,0.00009387989,0.000079330006,0.000056455297,0.000012081735,0.00010296461,0.0000072060066,0.00105485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928,0.00018275085,0.0002251504,0.0001607312,0.000014746462,0.00013665437],"domain_scores_gemma":[0.9992529,0.0003119153,0.00007800594,0.0001819933,0.00016256928,0.000012612907],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009517672,0.000084502426,0.00018596713,0.00005022859,0.000085996806,0.000012557116,0.00006167837,0.00013687015,0.0014493208],"category_scores_gemma":[0.00027677882,0.00007269619,0.00007934304,0.0001468663,0.000070169146,0.000054270786,0.00004424652,0.000109724075,0.000060932856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021630783,0.00014793548,0.0012453494,0.000023618377,0.00009489038,0.000006518451,0.0001027966,0.000005737043,0.9898848,0.0021728605,0.0047358987,0.0013632647],"study_design_scores_gemma":[0.00074821716,0.00010913495,0.061701614,0.00002837869,0.00004236495,0.000011430973,0.00022744329,0.000001669122,0.87546307,0.0004239662,0.061139885,0.000102823054],"about_ca_topic_score_codex":0.00026049308,"about_ca_topic_score_gemma":0.00026144067,"teacher_disagreement_score":0.11442175,"about_ca_system_score_codex":0.000009783561,"about_ca_system_score_gemma":0.00006441506,"threshold_uncertainty_score":0.9994635},"labels":[],"label_agreement":null},{"id":"W3215483604","doi":"10.1136/archdischild-2021-323055","title":"Waning infant pertussis during COVID-19 pandemic","year":2021,"lang":"en","type":"article","venue":"Archives of Disease in Childhood","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Pandemic; Coronavirus disease 2019 (COVID-19); Incidence (geometry); Pediatrics; Quarter (Canadian coin); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Cohort; Whooping cough; Cohort study; Virology; Outbreak; Infectious disease (medical specialty); Vaccination; Internal medicine; Disease","score_opus":0.013078056576205416,"score_gpt":0.25704312385711175,"score_spread":0.24396506728090633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215483604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965467,0.002116477,0.00003090231,0.00036483645,0.00021620124,0.00009508642,0.000086575834,0.000049504783,0.0004937245],"genre_scores_gemma":[0.9990683,0.00042767805,0.00004003559,0.00010404761,0.000036953094,0.0000163092,0.00011573385,0.000011209227,0.00017972144],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991027,0.0001544894,0.00025878407,0.00025020936,0.000012719944,0.00022108652],"domain_scores_gemma":[0.9993842,0.00021270209,0.00006849305,0.00024694783,0.000011498804,0.00007612008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000046086432,0.00011767009,0.0002095922,0.00013609674,0.00014594202,0.000009203229,0.00010869298,0.000050373554,0.0005633725],"category_scores_gemma":[0.00036030507,0.00010842853,0.00012426198,0.00012772891,0.00008192371,0.00006352545,0.00013347014,0.00016205033,0.000018640465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018920471,0.0003858297,0.7324741,0.000067069865,0.00009725726,0.000010203566,0.0016082053,0.0000808231,0.26334745,0.0003241975,0.00002707713,0.0013886156],"study_design_scores_gemma":[0.0017719447,0.000026817124,0.9864327,0.00009090371,0.000035301553,0.00003994944,0.0002062238,0.0000031736488,0.008303806,0.0012003222,0.0017503261,0.00013854635],"about_ca_topic_score_codex":0.00016799102,"about_ca_topic_score_gemma":0.000113595524,"teacher_disagreement_score":0.25504363,"about_ca_system_score_codex":0.000015082027,"about_ca_system_score_gemma":0.00023471068,"threshold_uncertainty_score":0.6168534},"labels":[],"label_agreement":null},{"id":"W3215931900","doi":"10.5001/omj.2022.62","title":"Laboratory Performance and Clinical Correlation of Real-time Polymerase Chain Reaction as a Diagnostic Test for Bordetella Pertussis Isolated from Patients in Oman","year":2021,"lang":"en","type":"article","venue":"Oman Medical Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Gold standard (test); Bordetella pertussis; Polymerase chain reaction; Internal medicine; Real-time polymerase chain reaction; Throat; Whooping cough; Gastroenterology; Pathology; Surgery; Biology; Bacteria","score_opus":0.006322638447240384,"score_gpt":0.2605306551030744,"score_spread":0.254208016655834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215931900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998224,0.00029704714,0.00003173196,0.0003129173,0.0009238555,0.0000969311,0.00004142361,0.000011449162,0.000060616854],"genre_scores_gemma":[0.99656063,0.0028843093,0.000037450143,0.00007879514,0.00016316975,0.0000049542214,0.00014555124,0.000010319274,0.00011480957],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988192,0.00024905938,0.00056586694,0.00016608152,0.000040063995,0.00015977489],"domain_scores_gemma":[0.99771756,0.0017218672,0.00021858879,0.00009223787,0.00017469407,0.00007503502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041790077,0.00009806614,0.00026327587,0.000079185986,0.00012874536,0.000012720682,0.00005608143,0.00033395318,0.0007248534],"category_scores_gemma":[0.0042159683,0.000083212704,0.000057550376,0.00012414384,0.0000837186,0.00010411556,0.000029905035,0.00037917364,0.000024659488],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042843958,0.00097412843,0.8032468,0.000017655366,0.000121323435,0.000016506709,0.00017546429,3.9966815e-7,0.13342929,0.000009147601,0.0015051661,0.060075693],"study_design_scores_gemma":[0.004116373,0.0008140817,0.988697,0.0002665063,0.00007524141,0.00010733254,0.00006166036,0.0004164872,0.002824989,0.000028160584,0.0024769884,0.00011516036],"about_ca_topic_score_codex":0.00020639085,"about_ca_topic_score_gemma":0.000101593265,"teacher_disagreement_score":0.18545024,"about_ca_system_score_codex":0.00002617794,"about_ca_system_score_gemma":0.00018161797,"threshold_uncertainty_score":0.7936636},"labels":[],"label_agreement":null},{"id":"W3215996469","doi":"10.1111/tmi.13704","title":"Current status and challenges in the care of patients with bacterial meningitis in the Philippines: A scoping review","year":2021,"lang":"en","type":"review","venue":"Tropical Medicine & International Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Health care; Epidemiology; Psychological intervention; Intensive care medicine; Meningitis; Disease burden; Developing country; Environmental health; Pediatrics; Nursing; Population; Economic growth; Pathology","score_opus":0.09863149308659101,"score_gpt":0.4021288571052296,"score_spread":0.3034973640186386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215996469","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020935563,0.9926491,9.827515e-7,0.0029854707,0.00097570807,0.0011872292,0.0000617942,0.000004333597,0.00004182497],"genre_scores_gemma":[0.0020034323,0.99658686,0.000003822755,0.0001135723,0.0002150859,0.00016233929,0.0009046364,0.000008906967,0.0000013486197],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977975,0.0008885328,0.00077411346,0.00025903812,0.00007418299,0.00020663615],"domain_scores_gemma":[0.9988924,0.0004309393,0.00034904815,0.00019700127,0.000113110545,0.000017474644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026398132,0.00020435339,0.0011396945,0.00013003714,0.00004985701,0.000006700313,0.00023357688,0.00008949472,0.00022500275],"category_scores_gemma":[0.00019091171,0.00009286146,0.00006832494,0.00017198306,0.00010431898,0.000034559052,0.000051909643,0.00043644483,0.0000019323497],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023928102,0.00013347328,0.0010509542,0.03279084,0.000047903883,0.0000010345954,0.0009765486,1.0306127e-8,9.3793346e-8,0.00093098293,0.00012273517,0.9639215],"study_design_scores_gemma":[0.00093780184,0.00045218572,0.014670103,0.2676484,0.00007497529,0.000025010091,0.0002234275,1.29259545e-8,3.0588286e-8,0.000004270826,0.7158871,0.00007669781],"about_ca_topic_score_codex":0.00019351985,"about_ca_topic_score_gemma":0.00075411267,"teacher_disagreement_score":0.9638448,"about_ca_system_score_codex":0.00008382532,"about_ca_system_score_gemma":0.0002650113,"threshold_uncertainty_score":0.37867805},"labels":[],"label_agreement":null},{"id":"W344269213","doi":"10.1155/2009/871071","title":"Profile of Serogroup Y Meningococcal Infections in Canada: Implications for Vaccine Selection","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Alberta; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; Stollery Children's Hospital; University of British Columbia; Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Medicine; Incidence (geometry); Neisseria meningitidis; Conjugate vaccine; Virology; Immunization; Pediatrics; Immunology; Biology; Antigen","score_opus":0.005704825274729102,"score_gpt":0.2284307448667197,"score_spread":0.2227259195919906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W344269213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99505866,0.0017155815,0.00028006983,0.0016543664,0.0007885846,0.00023199755,0.00020744813,0.000007292454,0.000055986075],"genre_scores_gemma":[0.9994348,0.00012732387,0.000017091263,0.00022143895,0.000097224765,0.000014923764,0.00006124329,0.0000068342492,0.00001909909],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989355,0.0000880419,0.0005164167,0.00013946622,0.00000863202,0.00031194524],"domain_scores_gemma":[0.99908423,0.00015656602,0.00022269734,0.00007307087,0.00024616974,0.00021725525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015575207,0.00012629457,0.00037815724,0.00031253815,0.00015661132,0.000007559687,0.00009347787,0.00019260055,0.00038778692],"category_scores_gemma":[0.0003711658,0.00010897392,0.00008690836,0.0002270978,0.00007218664,0.000063022686,0.000008067721,0.00023152152,0.0000010419698],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011808629,0.00024199205,0.81745553,0.000036836627,0.00019123881,0.0000034955196,0.000066990826,0.000020446923,0.13861373,0.0023688846,0.009836299,0.03104646],"study_design_scores_gemma":[0.0040702294,0.0018196346,0.9466737,0.00011438045,0.00014785865,0.0032925752,0.000088701585,0.000007310682,0.0017052772,0.00085580203,0.04099087,0.00023367778],"about_ca_topic_score_codex":0.42050904,"about_ca_topic_score_gemma":0.9337947,"teacher_disagreement_score":0.51328564,"about_ca_system_score_codex":0.0002756501,"about_ca_system_score_gemma":0.0038074953,"threshold_uncertainty_score":0.67543334},"labels":[],"label_agreement":null},{"id":"W353002146","doi":"10.1093/pch/11.1.29a","title":"Les bénéfices des glucocorticoïdes dans le traitement des méningites communautaires de l'enfant : Fin de la controverse?","year":2006,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"","keywords":"Medicine; Humanities; Philosophy","score_opus":0.011506855949964439,"score_gpt":0.27047990729998284,"score_spread":0.2589730513500184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W353002146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83637094,0.15467262,0.002541676,0.0027580785,0.0009568628,0.00038355266,0.0002649987,0.00014120182,0.0019100782],"genre_scores_gemma":[0.9731601,0.02214753,0.002335662,0.00031185197,0.0009889056,0.000053401054,0.00016864152,0.00005423098,0.0007796865],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9956509,0.0017565845,0.0008450821,0.0004066226,0.000045610897,0.0012952071],"domain_scores_gemma":[0.99770546,0.0012493294,0.0004572982,0.00033330722,0.00010958937,0.00014500851],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0015355956,0.0004255256,0.00062973856,0.00024070717,0.002667606,0.00015725207,0.0002971198,0.00054807414,0.0002970926],"category_scores_gemma":[0.0002448029,0.00042815844,0.0002722489,0.00039300884,0.0009945377,0.00021813397,0.00012256861,0.0007398438,0.000036719455],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023886186,0.0028702694,0.7978717,0.0012040985,0.00043086745,0.00001328327,0.010507918,0.00081235345,0.030265156,0.061091203,0.008728987,0.085965306],"study_design_scores_gemma":[0.0025021543,0.000617909,0.8330153,0.00030462226,0.00022299124,0.00033483576,0.002055902,0.00006733852,0.0033732522,0.0048900037,0.15214325,0.00047242144],"about_ca_topic_score_codex":0.16456072,"about_ca_topic_score_gemma":0.027230151,"teacher_disagreement_score":0.14341426,"about_ca_system_score_codex":0.00069052476,"about_ca_system_score_gemma":0.00082057057,"threshold_uncertainty_score":0.999817},"labels":[],"label_agreement":null},{"id":"W4200285941","doi":"10.1016/j.opresp.2021.100153","title":"Pertussis Vaccine in COPD and Asthma: An Old Acquaintance Is Back","year":2021,"lang":"en","type":"editorial","venue":"Open Respiratory Archives","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Chiesi Farmaceutici; Pfizer; Teva Pharmaceutical Industries; AstraZeneca; Boehringer Ingelheim","keywords":"Asthma; COPD; Medicine; Internal medicine","score_opus":0.018269878515224554,"score_gpt":0.2918284936246678,"score_spread":0.27355861510944324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200285941","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22099586,0.014478425,0.000011766615,0.00038097374,0.7522326,0.0013132334,0.001247485,0.00006901368,0.009270638],"genre_scores_gemma":[0.011726709,0.008343754,0.0011364637,0.0031628448,0.82709676,0.0008447261,0.0060549104,0.0005361857,0.14109765],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.997329,0.00076817465,0.0005263935,0.0009263617,0.000032014108,0.00041806523],"domain_scores_gemma":[0.99838156,0.0005725418,0.00022354587,0.0006964493,0.00006481421,0.00006108642],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003197552,0.00042935094,0.0008506502,0.00021180541,0.00026483976,0.0002453743,0.00067304895,0.0007661116,0.0034926028],"category_scores_gemma":[0.00017986071,0.00038857033,0.000094764386,0.00017006765,0.00011843183,0.00035327635,0.0007537634,0.00096364465,0.00016975756],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005517896,0.000247032,0.0014947862,0.00009325922,0.00015883906,0.00001564319,0.00071139244,3.9932937e-7,0.06777496,0.00015043725,0.9199883,0.008813191],"study_design_scores_gemma":[0.0023598205,0.00039204696,0.0057367487,0.0002958378,0.000027093114,0.000008537545,0.00013869279,7.0940615e-7,0.0028931955,0.000080504185,0.987622,0.0004447764],"about_ca_topic_score_codex":0.0004764656,"about_ca_topic_score_gemma":0.002181112,"teacher_disagreement_score":0.20926915,"about_ca_system_score_codex":0.000029387109,"about_ca_system_score_gemma":0.00030266566,"threshold_uncertainty_score":0.9998566},"labels":[],"label_agreement":null},{"id":"W4200488596","doi":"10.1016/j.euroneuro.2021.10.101","title":"P.0100 Impact of emotional blunting on functioning in patients with MDD: do the perspectives of patients and HCPS differ?","year":2021,"lang":"en","type":"article","venue":"European Neuropsychopharmacology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Educational attainment; Demography; Medicine; Multivariate analysis; Quarter (Canadian coin); Metropolitan area; Gerontology; Disease; Psychology; Internal medicine; Geography","score_opus":0.007249730407946184,"score_gpt":0.2464263640128601,"score_spread":0.23917663360491392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200488596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979747,0.00013690523,0.0000027153715,0.00005799507,0.0006855174,0.00015559743,0.00003549869,0.000018627188,0.00093245343],"genre_scores_gemma":[0.99972206,0.00004660127,0.000005374705,0.000059957634,0.00003901321,0.000002669985,0.00002954158,0.000026933803,0.00006781665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985279,0.00073403894,0.0002705954,0.00026840638,0.000024427949,0.00017465206],"domain_scores_gemma":[0.9993011,0.00015061957,0.0001898769,0.00014170614,0.00020145507,0.000015244899],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112990165,0.00014332769,0.00020940785,0.0001161598,0.000091087946,0.000009110078,0.00008788101,0.000039437084,0.00044826782],"category_scores_gemma":[0.000064146734,0.000094448216,0.00006436987,0.00021520403,0.00015042978,0.000054997152,0.00007276312,0.0002662716,0.000011201465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014468598,0.0011042946,0.7630702,0.000011730575,0.0001992154,0.000002833108,0.0007787193,0.00007742168,0.23034334,0.0000740995,0.00052924856,0.0023620054],"study_design_scores_gemma":[0.0042709946,0.0010770436,0.9931956,0.000021255091,0.000030007772,0.0000062473628,0.00009388499,0.0000013625805,0.0008642572,0.0000039493557,0.0003537428,0.00008168886],"about_ca_topic_score_codex":0.0000100005245,"about_ca_topic_score_gemma":0.0000018510924,"teacher_disagreement_score":0.23012534,"about_ca_system_score_codex":0.000018770013,"about_ca_system_score_gemma":0.00002278016,"threshold_uncertainty_score":0.49082184},"labels":[],"label_agreement":null},{"id":"W4200536663","doi":"10.1016/j.vaccine.2021.12.007","title":"The half-life of maternal transplacental antibodies against diphtheria, tetanus, and pertussis in infants: an individual participant data meta-analysis","year":2021,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"National Institute of Allergy and Infectious Diseases; Biotechnology and Biological Sciences Research Council; National Institute for Health and Care Research","keywords":"Transplacental; Diphtheria; Tetanus; Medicine; Whooping cough; Antibody; Pediatrics; Virology; Immunization; Meta-analysis; Immunology; Vaccination; Pregnancy; Biology; Fetus; Placenta; Internal medicine","score_opus":0.187456189097071,"score_gpt":0.36866361774278633,"score_spread":0.18120742864571532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200536663","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025956651,0.97121793,0.0000022903164,0.000093214076,0.00032704853,0.00031579228,0.0020575696,0.000017746563,0.0000117504005],"genre_scores_gemma":[0.024513219,0.9715042,0.000022111544,0.000018512443,0.000049831437,0.000033440225,0.0036981183,0.000028447295,0.00013213868],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969031,0.00095093425,0.0011539627,0.00059047126,0.00003834614,0.0003631503],"domain_scores_gemma":[0.9980114,0.00033702733,0.00046323118,0.0010905749,0.00005430572,0.000043452124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008499865,0.00043980824,0.0035377075,0.00028689302,0.00019757713,0.00008878906,0.0006465142,0.0003397204,0.0008199373],"category_scores_gemma":[0.00010631095,0.00023961911,0.00069043855,0.0005390773,0.000052249456,0.00019298543,0.0003509916,0.0003492207,0.000008909455],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016759061,0.0007005264,0.00808638,0.0022724792,0.6833495,0.00002115208,0.0005817108,0.000003863961,0.0006206544,0.000162535,0.00057720765,0.30345643],"study_design_scores_gemma":[0.00061811955,0.000072766605,0.0057808603,0.00032009953,0.37300146,0.00006315099,0.00014726452,0.00000382477,0.000054910073,0.0000019320246,0.61959046,0.00034517553],"about_ca_topic_score_codex":0.00095628516,"about_ca_topic_score_gemma":0.0031526934,"teacher_disagreement_score":0.61901325,"about_ca_system_score_codex":0.000008685405,"about_ca_system_score_gemma":0.00012304855,"threshold_uncertainty_score":0.97713834},"labels":[],"label_agreement":null},{"id":"W4200549858","doi":"10.1093/jpids/piab040","title":"Erratum to: Burden of Children Hospitalized With Pertussis in Canada in the Acellular Pertussis Vaccine Era, 1999–2015","year":2021,"lang":"en","type":"erratum","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Medicine; Pediatrics; Pertussis vaccine; Virology; Immunology; Immunization","score_opus":0.0033757788713735717,"score_gpt":0.20030675075094334,"score_spread":0.19693097187956976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200549858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9630686,0.021168048,0.000004631833,0.0018889396,0.012887794,0.0005227861,0.00026901357,0.000010130813,0.00018007365],"genre_scores_gemma":[0.9869969,0.007237503,0.000009812265,0.0003472952,0.002033505,0.00003315762,0.0001372865,0.000053140782,0.0031513837],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99735683,0.0006253059,0.0010029764,0.00032970283,0.00018792,0.00049727026],"domain_scores_gemma":[0.9975977,0.00020705866,0.0011647699,0.0005778675,0.00037895623,0.00007363377],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004132361,0.00046681857,0.0010968549,0.00021501243,0.0002560721,0.000056240944,0.00077519804,0.0004673972,0.00024243737],"category_scores_gemma":[0.00026667415,0.00025566685,0.0008487582,0.0014964475,0.000052827134,0.000117025775,0.00020959003,0.0019359493,0.000002593773],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007845128,0.0002699563,0.41335508,0.00007605972,0.00050908636,0.000009092105,0.0007343253,0.00022324719,0.00011825742,0.0000012819129,0.5845636,0.000061525025],"study_design_scores_gemma":[0.00691093,0.00090333447,0.9365302,0.000531322,0.0035892732,0.0022164905,0.0024020658,0.000012843147,0.000036051926,0.00005359006,0.04579529,0.0010186112],"about_ca_topic_score_codex":0.34454533,"about_ca_topic_score_gemma":0.15867983,"teacher_disagreement_score":0.53876835,"about_ca_system_score_codex":0.0007772409,"about_ca_system_score_gemma":0.005158453,"threshold_uncertainty_score":0.99998957},"labels":[],"label_agreement":null},{"id":"W4205229133","doi":"10.1385/1592591485","title":"Meningococcal Vaccines","year":2001,"lang":"en","type":"book","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Research (Canada)","funders":"University of Oxford; Imperial College London; University of Southampton","keywords":"Virology; Medicine; Meningococcal vaccine; Immunology; Immunization; Antigen","score_opus":0.045124603282902,"score_gpt":0.26508672713882564,"score_spread":0.21996212385592365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205229133","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00071138487,0.009057149,0.000016006821,0.000011440969,0.002625808,0.00041077004,0.00006016792,0.00031190066,0.98679537],"genre_scores_gemma":[0.0010394877,0.00047018944,0.000008536001,0.00004798294,0.0008315605,0.00008549737,0.0003820268,0.000078390236,0.9970563],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986278,0.00008065951,0.0004101659,0.00046183923,0.00001847988,0.00040107558],"domain_scores_gemma":[0.9990295,0.000063896994,0.00022750144,0.0005520836,0.00009832822,0.000028678898],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009250459,0.0004347224,0.0005668173,0.00015436555,0.00028545177,0.000055903678,0.00032924095,0.00088472007,0.0026380313],"category_scores_gemma":[0.00001087371,0.00039073473,0.00022129285,0.000007932288,0.000093363466,0.000041487223,0.00020015582,0.00060385326,0.00055246154],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013664944,0.00006627112,0.0000046938812,0.00010803366,0.00089456287,0.000014519793,0.00025965009,8.860539e-7,0.008926667,0.048328012,0.8846517,0.056608353],"study_design_scores_gemma":[0.0007595137,0.00010577535,0.000032734653,0.000097614684,0.00019052146,0.000102134756,0.0000032805606,2.2436149e-7,0.0021034917,0.0011818905,0.99501103,0.0004117572],"about_ca_topic_score_codex":0.00024863123,"about_ca_topic_score_gemma":0.00013922685,"teacher_disagreement_score":0.110359356,"about_ca_system_score_codex":0.00006121396,"about_ca_system_score_gemma":0.00008540631,"threshold_uncertainty_score":0.99985445},"labels":[],"label_agreement":null},{"id":"W4205695980","doi":"10.1093/pch/8.8.512","title":"&lt;italic&gt;Haemophilus influenzae&lt;/italic&gt; type b cases in 2001–2002","year":2003,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Medicine; Virology; Biology; Genetics; Bacteria","score_opus":0.021098845356748434,"score_gpt":0.27410645368212844,"score_spread":0.25300760832538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205695980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9498776,0.035893396,0.000016859918,0.0016094007,0.004540737,0.00068060216,0.00016712288,0.00018597633,0.007028302],"genre_scores_gemma":[0.98922324,0.006967215,0.00013187653,0.0018771415,0.00049161963,0.000034040215,0.00019306636,0.000059014852,0.0010227758],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969992,0.0004897965,0.00083186827,0.00055866165,0.000053704847,0.0010667447],"domain_scores_gemma":[0.9986071,0.0002514469,0.00031732157,0.00052425667,0.00015531563,0.0001445577],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00080760376,0.00038871597,0.0006444172,0.0005024145,0.00052081555,0.000042619828,0.0002282205,0.00047030923,0.00118493],"category_scores_gemma":[0.0006189899,0.00036666257,0.00013967523,0.0011940212,0.00008277704,0.00019269888,0.00008405839,0.00060611236,0.0012301663],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079140253,0.004159834,0.3111974,0.0006508292,0.00054131093,0.00012272637,0.0027376327,0.00020452448,0.02274231,0.061475217,0.5805169,0.014859963],"study_design_scores_gemma":[0.0025583212,0.0008029569,0.08460609,0.00005130603,0.000051249524,0.000661048,0.000071468596,0.0000036998545,0.00045125297,0.00027190428,0.90988183,0.00058886333],"about_ca_topic_score_codex":0.0009706617,"about_ca_topic_score_gemma":0.0014921095,"teacher_disagreement_score":0.329365,"about_ca_system_score_codex":0.00021934113,"about_ca_system_score_gemma":0.00042656905,"threshold_uncertainty_score":0.9998785},"labels":[],"label_agreement":null},{"id":"W4205774081","doi":"10.3410/f.1033729.387923","title":"Faculty Opinions recommendation of Outer membrane vesicle production by Escherichia coli is independent of membrane instability.","year":2006,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health; National Science Foundation","keywords":"Vesicle; Bacterial outer membrane; Mutant; Cell envelope; Escherichia coli; Biology; Cell biology; Peptidoglycan; Gene; Membrane; Genetics","score_opus":0.020825917925769218,"score_gpt":0.3082679595731664,"score_spread":0.2874420416473972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205774081","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020272544,0.0011469452,0.000009278237,0.07166616,0.0025048708,0.0014006601,0.9230002,0.0000339551,0.00003518322],"genre_scores_gemma":[0.00027213764,0.0003425107,0.00010141692,0.000843019,0.00017183003,0.00017744247,0.99614656,0.000023942823,0.0019211291],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961021,0.0006647956,0.0019375772,0.0006880675,0.0002867056,0.0003207507],"domain_scores_gemma":[0.9924348,0.00009341447,0.0019248948,0.001313167,0.0041576982,0.00007603236],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011722378,0.00049205666,0.0011181957,0.00029235517,0.00022685359,0.0000490046,0.0009061306,0.0010667453,0.0014015179],"category_scores_gemma":[0.0020522473,0.00033481282,0.000535726,0.0014654385,0.00041138052,0.00034502387,0.00033061518,0.00095159747,0.000048255526],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004784772,0.0010480884,0.000015460413,0.0049415133,0.00027568944,2.7482034e-8,0.00009494995,1.0373491e-7,0.004448145,0.000043372143,0.9883659,0.00071891624],"study_design_scores_gemma":[0.00090643635,0.00017143614,0.0014579573,0.0027622157,0.00024736367,0.000024501582,0.000023856343,4.847869e-7,0.010889146,0.000007787548,0.9832227,0.00028609534],"about_ca_topic_score_codex":0.0005610783,"about_ca_topic_score_gemma":0.00002745488,"teacher_disagreement_score":0.07314634,"about_ca_system_score_codex":0.00009378914,"about_ca_system_score_gemma":0.00031663978,"threshold_uncertainty_score":0.9999104},"labels":[],"label_agreement":null},{"id":"W4206005977","doi":"10.47391/jpma.1178","title":"Increase in Penicillin and multidrug resistance in Streptococcus pneumoniae (1993-2016): report from a tertiary care hospital laboratory, Pakistan","year":2022,"lang":"en","type":"article","venue":"Journal of the Pakistan Medical Association","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Streptococcus pneumoniae; Multiple drug resistance; Penicillin; Penicillin resistance; Streptococcaceae; Antibiotics; Antibiotic resistance","score_opus":0.003069284579795272,"score_gpt":0.24394932791627313,"score_spread":0.24088004333647786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206005977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993293,0.0021387415,0.0000036341592,0.0027602497,0.0013983563,0.00018912432,0.00015656483,0.000011623155,0.000048695667],"genre_scores_gemma":[0.9993699,0.00008113279,0.000014619964,0.000109563465,0.00011369697,0.000019240577,0.000021775017,0.000013013043,0.00025704343],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99761546,0.0008632299,0.00096235867,0.00017873691,0.00017279392,0.00020742296],"domain_scores_gemma":[0.99835944,0.0003865478,0.0008890925,0.000167706,0.00015369931,0.000043519594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017675249,0.00012310116,0.0003106629,0.00010611232,0.00019519927,0.000025488627,0.00022998368,0.0001980205,0.0003299501],"category_scores_gemma":[0.00097140286,0.0000936406,0.000092649,0.00023891039,0.00005184589,0.0001170772,0.00014778854,0.0010035275,0.0000036778652],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001268615,0.0003029862,0.9719025,0.000011603912,0.00009313986,0.00016176091,0.003562886,0.000005183409,0.019859321,0.000023651086,0.0033586747,0.0005914327],"study_design_scores_gemma":[0.002418811,0.00006773104,0.95795554,0.00012112393,0.00003794024,0.000028358774,0.003982765,0.000003315054,0.0004272488,0.00022820469,0.034594167,0.00013481054],"about_ca_topic_score_codex":0.0010548882,"about_ca_topic_score_gemma":0.003899115,"teacher_disagreement_score":0.031235494,"about_ca_system_score_codex":0.0008772266,"about_ca_system_score_gemma":0.00036137362,"threshold_uncertainty_score":0.43598837},"labels":[],"label_agreement":null},{"id":"W4206275336","doi":"10.1002/ppul.25839","title":"Childhood pertussis is still here: An Asian city's perspectives","year":2022,"lang":"en","type":"article","venue":"Pediatric Pulmonology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Medicine; Bordetella pertussis; Whooping cough; Outbreak; Pediatrics; Vaccination; Intensive care medicine; Immunology; Virology","score_opus":0.010610331569598268,"score_gpt":0.2351427801189261,"score_spread":0.22453244854932783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206275336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880557,0.0043538236,0.000021391059,0.002673199,0.0021360798,0.00021866465,0.00016277566,0.00022551665,0.002152817],"genre_scores_gemma":[0.9962084,0.00042087905,0.00004491684,0.00027515652,0.0005036044,0.00012852496,0.00012587816,0.000029793517,0.002262844],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99819505,0.00038757332,0.00029328853,0.00058312935,0.000025010015,0.0005159279],"domain_scores_gemma":[0.9992368,0.00006258967,0.00014953811,0.00044133276,0.00006417098,0.00004552731],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018085426,0.0002355957,0.00034013978,0.00035720872,0.00069303595,0.000022574937,0.00038156536,0.00023624857,0.019213041],"category_scores_gemma":[0.000059177462,0.00023072543,0.00013813499,0.00045206523,0.00008078084,0.00015446224,0.00029718442,0.00061389833,0.00043927302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010926845,0.0111868065,0.70574445,0.00004880336,0.0013712209,0.000072072304,0.041670136,0.00003520165,0.067568004,0.0097827045,0.09534802,0.06607992],"study_design_scores_gemma":[0.0027294438,0.0023880566,0.52280766,0.0000013230666,0.00034554728,0.0014643902,0.014615811,0.000007606594,0.0008615328,0.0016446203,0.45219317,0.0009408643],"about_ca_topic_score_codex":0.0003721534,"about_ca_topic_score_gemma":0.000033754528,"teacher_disagreement_score":0.35684514,"about_ca_system_score_codex":0.00009932973,"about_ca_system_score_gemma":0.0001178495,"threshold_uncertainty_score":0.98168355},"labels":[],"label_agreement":null},{"id":"W4206397316","doi":"10.2147/jaa.s335960","title":"Burden of Pertussis in Individuals with a Diagnosis of Asthma: A Retrospective Database Study in England","year":2022,"lang":"en","type":"article","venue":"Journal of Asthma and Allergy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"European Respiratory Society","keywords":"Asthma; Retrospective cohort study; MEDLINE; Young adult; Diagnosis code; Whooping cough","score_opus":0.00987919304588839,"score_gpt":0.23925565273742,"score_spread":0.22937645969153161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206397316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983666,0.0011032313,0.0000027605154,0.00016408403,0.00014475417,0.0001203801,0.000056973975,0.0000015402985,0.000039699622],"genre_scores_gemma":[0.99954087,0.00030592098,0.000039580395,0.000006469328,0.00003075492,0.000017035674,0.000006838006,0.0000066207667,0.00004593837],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989757,0.000276288,0.00045937416,0.000121180434,0.000044017972,0.00012345344],"domain_scores_gemma":[0.9993186,0.00010648401,0.00038061952,0.00009973597,0.00007897733,0.000015576508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005119826,0.0000981925,0.0004330186,0.00038025627,0.00005559733,0.0000056816807,0.00010651034,0.000042346794,0.00051631837],"category_scores_gemma":[0.000053422627,0.00007278715,0.00004443472,0.0002786026,0.000044258857,0.000108379405,0.00011416522,0.00029827896,2.9540178e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008826813,0.0016660275,0.9656507,0.000013447676,0.00044971827,0.00003287143,0.008644773,0.00013380975,0.019921225,0.000068329835,0.00018625046,0.0023501888],"study_design_scores_gemma":[0.0071662557,0.0051744436,0.96262044,0.00008409622,0.000018761144,0.00028303495,0.0070582074,0.0000023519694,0.0014603714,0.000028991632,0.015999986,0.00010308312],"about_ca_topic_score_codex":0.0012264311,"about_ca_topic_score_gemma":0.0013209765,"teacher_disagreement_score":0.018460853,"about_ca_system_score_codex":0.000031836094,"about_ca_system_score_gemma":0.000059607297,"threshold_uncertainty_score":0.56533235},"labels":[],"label_agreement":null},{"id":"W4206521683","doi":"10.1093/ije/dyac001","title":"The impact of pertussis vaccine programme changes on pertussis disease burden in Manitoba, 1992–2017—an age-period-cohort analysis","year":2022,"lang":"en","type":"article","venue":"International Journal of Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Cohort; Disease burden; Whooping cough; Outbreak; Burden of disease; Cohort study; Epidemiology; Pertussis vaccine","score_opus":0.0502032278380788,"score_gpt":0.34879247412869924,"score_spread":0.29858924629062045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206521683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890653,0.0016315299,0.000035461566,0.007456175,0.0014602642,0.0001527675,0.000120731325,0.000009901438,0.00006787887],"genre_scores_gemma":[0.9983996,0.0006451337,0.000037198657,0.00017343703,0.00033855136,0.00004954333,0.00019520102,0.000012447688,0.00014889473],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99679273,0.0015775008,0.0009572166,0.00024573717,0.00006633217,0.0003604937],"domain_scores_gemma":[0.9973221,0.00114219,0.0009192825,0.00029428193,0.00024820867,0.00007396537],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0025659904,0.00019276947,0.0007088338,0.00076157326,0.00021780694,0.000017950922,0.0007284005,0.00010276099,0.00092180754],"category_scores_gemma":[0.0015666464,0.00011796459,0.000589817,0.00031982947,0.00010741324,0.00007929535,0.00015571804,0.0005066376,0.0000066087887],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037559045,0.00074683386,0.9333569,0.0000035514638,0.007012759,0.00008726732,0.0003855498,0.0058343643,0.010980641,0.0011774772,0.0023342806,0.03432449],"study_design_scores_gemma":[0.001111179,0.0013917406,0.9789771,0.000016873546,0.00032733098,0.00029388518,0.00045835954,0.00024302227,0.000068581845,0.0008213754,0.016149607,0.00014096958],"about_ca_topic_score_codex":0.0054543866,"about_ca_topic_score_gemma":0.002277529,"teacher_disagreement_score":0.045620196,"about_ca_system_score_codex":0.000315944,"about_ca_system_score_gemma":0.000115687435,"threshold_uncertainty_score":0.9999915},"labels":[],"label_agreement":null},{"id":"W4206665019","doi":"10.1097/01.inf.0000147654.03890.b9","title":"Meningococcal Vaccines","year":2004,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Reverse vaccinology; Conjugate vaccine; Antigen; Virology; Meningococcal disease; Glycoconjugate; Meningococcal vaccine; Neisseria; Microbiology; Bacterial outer membrane; Neisseriaceae; Vaccination; Biology; Immunization; Medicine; Gene; Bacteria; Immunology; Antibiotics; Escherichia coli; Genetics; Bioinformatics; Epitope","score_opus":0.007725899216075366,"score_gpt":0.23128092375570844,"score_spread":0.22355502453963308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206665019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99257743,0.0017451026,0.00038571234,0.00095027796,0.0034500977,0.00014373787,0.000009609322,0.000120585195,0.0006174673],"genre_scores_gemma":[0.9969003,0.0006241164,0.00000939133,0.00012840709,0.0019581483,0.000016271471,0.000005409407,0.000017903218,0.00034005987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990696,0.00013204073,0.00028863671,0.00014100951,0.000025494088,0.00034326676],"domain_scores_gemma":[0.99933994,0.000084930434,0.00016578927,0.000204556,0.000121904224,0.00008290546],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026781863,0.00017055233,0.00016147652,0.00015523525,0.0010232313,0.0000876862,0.00018601184,0.00009073059,0.0010509648],"category_scores_gemma":[0.00015480116,0.00010464036,0.00018752806,0.0002685549,0.000041119867,0.00015718586,0.000060810893,0.00048112072,0.00073207053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007138531,0.0014480577,0.93335634,0.000045177756,0.0006458416,0.000047832462,0.0008088063,0.0021873973,0.024422897,0.00605341,0.025859915,0.004410446],"study_design_scores_gemma":[0.014188985,0.00091291196,0.86341345,0.000035764428,0.0020741539,0.013306549,0.0002269544,0.000004863488,0.001460399,0.046094287,0.057127733,0.001153967],"about_ca_topic_score_codex":0.000067567074,"about_ca_topic_score_gemma":0.000011428291,"teacher_disagreement_score":0.06994294,"about_ca_system_score_codex":0.000074467986,"about_ca_system_score_gemma":0.0002022598,"threshold_uncertainty_score":0.9998622},"labels":[],"label_agreement":null},{"id":"W4206898866","doi":"10.1016/j.vaccine.2022.01.029","title":"Seroprevalence of IgG and IgM antibodies to Haemophilus influenzae type a in Canadian children","year":2022,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia; NOSM University","funders":"National Research Council Canada; Centers for Disease Control and Prevention; Canadian Immunization Research Network; BC Children's Hospital","keywords":"Seroprevalence; Haemophilus influenzae; Immunology; Antibody; Population; Immunoglobulin G; Immunoglobulin M; Serology; Immunization; Antigen; Medicine; Biology; Microbiology; Environmental health; Antibiotics","score_opus":0.010340349042288614,"score_gpt":0.24433749980987768,"score_spread":0.23399715076758906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206898866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972509,0.0015231133,2.3906148e-7,0.0005534782,0.0003269615,0.00016894338,0.00008477335,0.000013112285,0.00007847146],"genre_scores_gemma":[0.9994528,0.00009311686,0.00001740606,0.00015483954,0.000016001317,0.0000066647412,0.000035111607,0.000006889213,0.00021712387],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99943125,0.000056624143,0.00015712871,0.00014698798,0.000008090144,0.00019989455],"domain_scores_gemma":[0.9997448,0.00001738044,0.000034222074,0.00014051647,0.000033146138,0.00002997207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110041656,0.00007774663,0.00016932076,0.00025591254,0.00012803894,0.000004513769,0.00009268036,0.00004406342,0.00090432],"category_scores_gemma":[0.00004192394,0.00007462874,0.000015430798,0.00029888068,0.0000064645697,0.000036819463,0.00011643743,0.00012135464,0.000026134054],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010884064,0.000037589212,0.86828136,0.000009377413,0.000038080092,0.0000012759143,0.0003502724,0.00006477672,0.12819146,0.00018856816,0.0016143313,0.0011140704],"study_design_scores_gemma":[0.0006248615,0.00025941254,0.97312015,0.000011780941,0.000011009666,0.00008206753,0.00005582877,0.0000018469924,0.0035726284,0.000029066723,0.022138335,0.00009300525],"about_ca_topic_score_codex":0.19358951,"about_ca_topic_score_gemma":0.12766331,"teacher_disagreement_score":0.12461883,"about_ca_system_score_codex":0.000034173412,"about_ca_system_score_gemma":0.00006275787,"threshold_uncertainty_score":0.99016696},"labels":[],"label_agreement":null},{"id":"W4210405795","doi":"10.9778/cmajo.20210011","title":"Coverage for pertussis vaccination during pregnancy with 4 models of vaccine delivery: a quasiexperimental, multicentre observational study","year":2022,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université de Montréal; Université Laval; McGill University; Hôpital Charles-Le Moyne; Centre Hospitalier Universitaire Sainte-Justine; Université du Québec à Montréal; Université de Sherbrooke","funders":"","keywords":"Medicine; Vaccination; Observational study; Logistic regression; Diphtheria; Tetanus; Pertussis vaccine; Pregnancy; Pediatrics; Confidence interval; Immunization; Internal medicine; Immunology","score_opus":0.06212264509111025,"score_gpt":0.3068526594455067,"score_spread":0.24473001435439645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210405795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966149,0.00036361636,0.00017547337,0.000098800614,0.00022819417,0.0021905242,0.00015599835,0.000021644759,0.00015089216],"genre_scores_gemma":[0.99740815,0.00001572943,0.00012642742,0.000017484224,0.000012455487,0.0010144218,0.00027419542,0.000016796906,0.0011143184],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992337,0.000110105946,0.00024249715,0.00024119999,0.000024306122,0.00014816053],"domain_scores_gemma":[0.9994685,0.000059989077,0.00015761398,0.00019290273,0.00011000419,0.000011010598],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000087902736,0.00011667302,0.00023236363,0.0000648024,0.0004965451,0.000026136335,0.00024329625,0.000034610126,0.0016113014],"category_scores_gemma":[0.000011196958,0.00009982093,0.000043665972,0.00013094362,0.0000052196224,0.00034410853,0.00030756157,0.000079284466,0.0000033627978],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009731241,0.008949746,0.27920666,0.00015117315,0.0016336936,0.0000054935585,0.012304072,0.0048950077,0.6726525,0.0024445332,0.0015141378,0.0065117576],"study_design_scores_gemma":[0.05841043,0.006889082,0.80871314,0.0001703819,0.0004522415,0.000116840914,0.017195927,0.0012182485,0.099832416,0.00032548961,0.0057327906,0.00094304763],"about_ca_topic_score_codex":0.0011263847,"about_ca_topic_score_gemma":0.00027332525,"teacher_disagreement_score":0.57282007,"about_ca_system_score_codex":0.00007433399,"about_ca_system_score_gemma":0.000053137028,"threshold_uncertainty_score":0.9993014},"labels":[],"label_agreement":null},{"id":"W4211122188","doi":"10.1093/pch/13.4.310","title":"Le traitement d'une méningite bactérienne présumée chez les enfants canadiens de six semaines et plus – Sommaire","year":2008,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.016979898053666433,"score_gpt":0.25963685419327887,"score_spread":0.24265695613961244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211122188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88986516,0.050662875,0.0004107465,0.04995766,0.0052701016,0.0007425127,0.0007004907,0.00015633777,0.0022340904],"genre_scores_gemma":[0.94934547,0.041866206,0.00035401835,0.0022210793,0.0015857071,0.000048975675,0.00050149724,0.00007943074,0.003997643],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959287,0.00080170325,0.0009293794,0.0005746716,0.000059008587,0.0017065051],"domain_scores_gemma":[0.99825513,0.00026518796,0.0005129944,0.00044334636,0.00015629911,0.0003670117],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0010670905,0.0005195763,0.0008428779,0.0003387678,0.0023330683,0.00004043876,0.00029056877,0.0006763242,0.0004895634],"category_scores_gemma":[0.00015074875,0.0005514365,0.00026853598,0.0007431477,0.00030498693,0.00022540752,0.0001395903,0.0010579355,0.00014041827],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095706945,0.0054181474,0.38006073,0.0031099347,0.0020152216,0.00018528258,0.13483071,0.0014615948,0.007865621,0.09512154,0.30205002,0.06692412],"study_design_scores_gemma":[0.004271765,0.00087705906,0.28711614,0.00026137743,0.00013528451,0.0018389198,0.0018491459,0.000045880075,0.00038598117,0.00018073921,0.7022386,0.0007990626],"about_ca_topic_score_codex":0.17558298,"about_ca_topic_score_gemma":0.14570439,"teacher_disagreement_score":0.40018862,"about_ca_system_score_codex":0.00057500374,"about_ca_system_score_gemma":0.003271688,"threshold_uncertainty_score":0.9996937},"labels":[],"label_agreement":null},{"id":"W4211228718","doi":"10.1016/j.jogc.2022.01.014","title":"Pertussis Vaccination in Canadian Pregnant Women, 2018–2019","year":2022,"lang":"en","type":"article","venue":"Journal of Obstetrics and Gynaecology Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Statistics Canada; University of Calgary; Université de Montréal; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Medicine; Vaccination; Family medicine; Obstetrics; Pregnancy; Pediatrics; Gynecology; Virology","score_opus":0.007322972056156581,"score_gpt":0.20127385909356021,"score_spread":0.19395088703740362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211228718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97249055,0.007254654,9.0740616e-7,0.0006025039,0.01913252,0.000076774144,0.00005307755,0.0000019256115,0.00038709864],"genre_scores_gemma":[0.9987805,0.00017188543,0.0000060348298,0.00020042407,0.000010030519,0.000009263979,0.000010418494,0.000006431541,0.00080501864],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99903923,0.00014481442,0.00034185333,0.0001016957,0.000027691942,0.00034470574],"domain_scores_gemma":[0.99909776,0.00044338376,0.00020770563,0.000076542565,0.00009407263,0.00008055191],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034310616,0.00008667868,0.00023527679,0.000536802,0.00027210175,0.00001077885,0.00012948133,0.00008785995,0.0037776718],"category_scores_gemma":[0.00064288964,0.00007788494,0.000027504413,0.00035575122,0.000012850239,0.0000675959,0.000049546765,0.00038004565,0.0000013636413],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035107398,0.000339643,0.6939,0.000029384128,0.00036968887,0.0007185722,0.0011716274,0.00039359948,0.0023008399,0.0009214712,0.05982985,0.23999023],"study_design_scores_gemma":[0.0012948932,0.00037090748,0.61248994,0.0000012638781,0.000012616666,0.0001539784,0.0005260308,0.0000059510166,0.000049507755,0.000062470506,0.38493776,0.000094677074],"about_ca_topic_score_codex":0.77740616,"about_ca_topic_score_gemma":0.91238046,"teacher_disagreement_score":0.3251079,"about_ca_system_score_codex":0.0030265492,"about_ca_system_score_gemma":0.0024025005,"threshold_uncertainty_score":0.997133},"labels":[],"label_agreement":null},{"id":"W4212767672","doi":"10.1183/13993003.01500-2021","title":"<i>Pseudomonas aeruginosa</i>membrane vesicles cause endothelial barrier failure and lung injury","year":2022,"lang":"en","type":"letter","venue":"European Respiratory Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; Hospital for Sick Children; University of Toronto; University of Guelph; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; Bundesministerium für Bildung und Forschung; Canadian Hematology Society; Deutsche Forschungsgemeinschaft; Canadian Lung Association; International Anesthesia Research Society","keywords":"Pseudomonas aeruginosa; Vesicle; Microbiology; Inflammasome; Lung; Chemistry; Membrane; Cell biology; Biology; Bacteria; Immunology; Medicine; Inflammation; Biochemistry; Internal medicine","score_opus":0.015306795139429055,"score_gpt":0.2353383530802182,"score_spread":0.22003155794078913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212767672","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8482472,0.019937854,0.000027691956,0.0988724,0.02211846,0.0009597578,0.0022229136,0.0005072316,0.0071065268],"genre_scores_gemma":[0.08357746,0.002453706,0.00012211819,0.81916773,0.059125498,0.000078146,0.00083337893,0.0011638505,0.033478137],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99527204,0.0027020506,0.00074546254,0.0005557542,0.000078387675,0.00064630056],"domain_scores_gemma":[0.99863374,0.00014280733,0.0005383375,0.0004925656,0.00011164349,0.000080896774],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008929168,0.00055515004,0.00057901064,0.000436972,0.0012834844,0.0002647352,0.00051415514,0.00046560162,0.009400703],"category_scores_gemma":[0.00009044371,0.00049050676,0.00027281907,0.00014171065,0.00022471366,0.00023329008,0.00038407068,0.005309401,0.00040859045],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097484604,0.000018390227,0.00029964204,0.000032630996,0.00036502938,0.0008362708,0.00009409318,6.4994117e-7,0.30266276,0.000009317288,0.69437784,0.001205871],"study_design_scores_gemma":[0.0012697439,0.00037717202,0.00031131756,0.000063301086,0.000218488,0.0036522304,0.00004503519,7.4953924e-8,0.009102885,0.000008060546,0.98442954,0.00052216306],"about_ca_topic_score_codex":0.000010120006,"about_ca_topic_score_gemma":0.000003892171,"teacher_disagreement_score":0.7646697,"about_ca_system_score_codex":0.000093334485,"about_ca_system_score_gemma":0.00018069589,"threshold_uncertainty_score":0.99975467},"labels":[],"label_agreement":null},{"id":"W4213130086","doi":"10.1155/2022/8092170","title":"Commensal and Pathogenic Bacterial-Derived Extracellular Vesicles in Host-Bacterial and Interbacterial Dialogues: Two Sides of the Same Coin","year":2022,"lang":"en","type":"review","venue":"Journal of Immunology Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Pasteur Institute of Iran","keywords":"Extracellular vesicles; Biology; Crosstalk; Pathogenic bacteria; Bacteria; Microbiology; Human health; Host (biology); Dysbiosis; Epigenetics; Microbiome; Cell biology; Bioinformatics; Genetics; Gene; Medicine","score_opus":0.09304165268838888,"score_gpt":0.352840469173236,"score_spread":0.25979881648484715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213130086","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4930243,0.503887,2.8853253e-7,0.000082121114,0.0025095802,0.00037401496,0.000111088906,0.000004641033,0.0000069763637],"genre_scores_gemma":[0.042886127,0.95644,0.000020323996,0.0000052898486,0.00033759337,0.000050967166,0.00009595561,0.00005239201,0.00011138642],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9909423,0.0062102373,0.0017731074,0.0003874344,0.00008536371,0.000601568],"domain_scores_gemma":[0.99607146,0.0019083465,0.001255282,0.000489265,0.0002337861,0.000041847394],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0031414893,0.00042821304,0.0022968757,0.0008164919,0.00037012025,0.00008281614,0.00078914606,0.00068199646,0.0011504461],"category_scores_gemma":[0.0009158028,0.00029147865,0.00040460253,0.00043933847,0.0012670059,0.00018242167,0.0012379683,0.002601135,0.000009423743],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011682288,0.00028071788,0.00025729428,0.0006749041,0.0008888052,0.000024884297,0.00059452606,3.2305813e-8,0.8980692,0.00008742894,0.00022246668,0.09773149],"study_design_scores_gemma":[0.0048009884,0.0020430484,0.003942447,0.0029184492,0.00045365738,0.0040231044,0.00067545177,1.1131602e-7,0.0056122486,0.00012691463,0.9749846,0.000418971],"about_ca_topic_score_codex":0.00029764292,"about_ca_topic_score_gemma":0.00013672694,"teacher_disagreement_score":0.97476214,"about_ca_system_score_codex":0.00017384268,"about_ca_system_score_gemma":0.00062040024,"threshold_uncertainty_score":0.99995375},"labels":[],"label_agreement":null},{"id":"W4213135463","doi":"10.1007/s00253-022-11798-1","title":"Non-primate animal models for pertussis: back to the drawing board?","year":2022,"lang":"en","type":"review","venue":"Applied Microbiology and Biotechnology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Context (archaeology); Bordetella pertussis; Nonhuman primate; Vaccination; Biology; Primate; Narrative review; Animal model; Immunology; Virology; Evolutionary biology; Medicine; Intensive care medicine; Neuroscience; Genetics","score_opus":0.028989656780773476,"score_gpt":0.2739071770905657,"score_spread":0.24491752030979225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213135463","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00068048434,0.99135023,0.00048817138,0.0012796894,0.0016551344,0.003228929,0.0007348998,0.00022687925,0.0003555722],"genre_scores_gemma":[0.0009276655,0.9942103,0.00034134128,0.00047590066,0.00014249641,0.0019311652,0.0012315525,0.000092413604,0.0006471795],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99711645,0.00013779708,0.00074318756,0.0011154785,0.00000873579,0.00087833824],"domain_scores_gemma":[0.99847704,0.00035691058,0.0003496528,0.00075443805,0.000029228751,0.000032749864],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0004302137,0.00072214234,0.001910337,0.0004442531,0.0010364526,0.000035645666,0.0008603769,0.0025246895,0.0005590057],"category_scores_gemma":[0.00002690463,0.00047725326,0.00039941334,0.00042250688,0.00043717146,0.000038320286,0.0010639102,0.0012155897,0.0005346956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002987411,0.00015750495,6.1024167e-7,0.0017639603,0.0014014877,0.0000017588425,0.00016520571,0.0000026523314,0.17454326,0.016399413,0.024371298,0.7808941],"study_design_scores_gemma":[0.00058289105,0.00042608893,3.7141092e-7,0.00017488988,0.00058046996,0.0006080773,0.00010862131,0.0000010180567,0.0029069902,0.00016378953,0.9938863,0.00056048605],"about_ca_topic_score_codex":0.00003770669,"about_ca_topic_score_gemma":0.000035139325,"teacher_disagreement_score":0.969515,"about_ca_system_score_codex":0.00008763946,"about_ca_system_score_gemma":0.00013351609,"threshold_uncertainty_score":0.9997679},"labels":[],"label_agreement":null},{"id":"W4213187826","doi":"10.3390/vaccines10020309","title":"An Observational Study to Assess the Effectiveness of 4CMenB against Meningococcal Disease and Carriage and Gonorrhea in Adolescents in the Northern Territory, Australia—Study Protocol","year":2022,"lang":"en","type":"article","venue":"Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Health and Medical Research Council","keywords":"Medicine; Carriage; Gonorrhea; Meningococcal vaccine; Observational study; Neisseria meningitidis; Meningococcal disease; Pediatrics; Family medicine; Immunology; Internal medicine; Immunization; Biology","score_opus":0.07580442752416444,"score_gpt":0.35753284448178374,"score_spread":0.2817284169576193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213187826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9646453,0.000012749043,7.9141836e-7,0.00006619807,0.00015379755,0.035083245,0.000025780986,0.000009358925,0.0000027598037],"genre_scores_gemma":[0.95952594,2.2370868e-7,8.2164314e-7,0.000022268227,0.000030397954,0.040387202,0.000015236567,0.000008370952,0.000009541575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973341,0.0019655314,0.00025990416,0.0002605678,0.000030218167,0.00014965181],"domain_scores_gemma":[0.99949336,0.00014378178,0.000064065665,0.00024438708,0.000035300214,0.000019083625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011205516,0.00013837779,0.00020655776,0.00010265194,0.00024408512,0.000029176368,0.00020716927,0.000025587824,0.000020198511],"category_scores_gemma":[0.00004257039,0.000085958534,0.000020355781,0.00022178431,0.000018250903,0.00008991835,0.00015584394,0.00019581792,7.993026e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001565644,0.002383214,0.9748285,0.00003907616,0.000031222175,0.0000033447425,0.001752182,0.00011335114,0.019079227,0.0000130637,0.000011561695,0.00017961998],"study_design_scores_gemma":[0.0030148947,0.00097225484,0.99091566,0.00002974235,0.000021914893,0.000004577785,0.0046137846,0.0000064522364,0.00011539664,0.000015936532,0.00019298638,0.00009641151],"about_ca_topic_score_codex":0.0022800753,"about_ca_topic_score_gemma":0.006004693,"teacher_disagreement_score":0.01896383,"about_ca_system_score_codex":0.00002941685,"about_ca_system_score_gemma":0.000032003725,"threshold_uncertainty_score":0.35052872},"labels":[],"label_agreement":null},{"id":"W4213337952","doi":"10.1016/j.eclinm.2022.101275","title":"Biofire FilmArray Meningitis/Encephalitis panel for the aetiological diagnosis of central nervous system infections: A systematic review and diagnostic test accuracy meta-analysis","year":2022,"lang":"en","type":"review","venue":"EClinicalMedicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Michael's Hospital","funders":"","keywords":"Medicine; Meta-analysis; Internal medicine; Meningitis; Encephalitis; Etiology; Diagnostic accuracy; MEDLINE; Publication bias; Pediatrics; Immunology; Virus","score_opus":0.18387654778691492,"score_gpt":0.38102735721128217,"score_spread":0.19715080942436725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213337952","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000014477313,0.99063146,0.00009545846,0.0006176247,0.0009562432,0.005780856,0.0017978065,0.00008744232,0.000018653616],"genre_scores_gemma":[0.0011724068,0.98370105,0.00001673541,0.00017019297,0.00014518046,0.013402731,0.0010736003,0.0000374167,0.00028070214],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9934768,0.0019766302,0.003278555,0.00073277287,0.000068686444,0.0004665649],"domain_scores_gemma":[0.8809966,0.11576893,0.0020935084,0.0009266192,0.00014471576,0.000069622154],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002558738,0.00063040317,0.009974322,0.0002442688,0.0005116415,0.00002742756,0.00054313266,0.0005080358,0.0037818814],"category_scores_gemma":[0.04889595,0.00031394028,0.003685172,0.0010805201,0.00037364,0.0000578973,0.00024761187,0.00072360126,0.00002473777],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009447623,0.00052689196,0.0002639488,0.7797765,0.19521046,0.000009128641,0.000041054478,0.0000015389705,0.0000012976155,0.000270384,0.004840048,0.019049285],"study_design_scores_gemma":[0.00027318648,0.0005808838,0.00007488392,0.02683855,0.62628955,0.00033491536,0.000056974102,0.0000011178058,3.494494e-7,0.000004296563,0.34529817,0.00024712583],"about_ca_topic_score_codex":0.00030312853,"about_ca_topic_score_gemma":0.000031768464,"teacher_disagreement_score":0.752938,"about_ca_system_score_codex":0.00007788894,"about_ca_system_score_gemma":0.00012663289,"threshold_uncertainty_score":0.9999313},"labels":[],"label_agreement":null},{"id":"W4220754841","doi":"10.1021/acs.molpharmaceut.1c00852","title":"Assessing the <i>In Vivo</i> Effectiveness of Cationic Lipid Nanoparticles with a Triple Adjuvant for Intranasal Vaccination against the Respiratory Pathogen <i>Bordetella pertussis</i>","year":2022,"lang":"en","type":"article","venue":"Molecular Pharmaceutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Government of Canada; NanoMedicines Innovation Network","keywords":"Adjuvant; Immunogenicity; Antigen; Bordetella pertussis; Immune system; Vaccination; Pertactin; Booster dose; Immunology; Medicine; Microbiology; Pertussis toxin; Immunization; Biology; Receptor; Internal medicine","score_opus":0.022502667208435186,"score_gpt":0.3082032492611566,"score_spread":0.2857005820527214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220754841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949876,0.001926943,0.0011481057,0.00033051884,0.0005012912,0.000940655,0.00006201176,0.000021536795,0.00008134737],"genre_scores_gemma":[0.99902046,0.00005323262,0.00003092112,0.0003891853,0.000023764504,0.00040733116,0.000033699904,0.000022093795,0.000019322943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816406,0.0011229573,0.00025872394,0.000193873,0.00004005994,0.00022033008],"domain_scores_gemma":[0.9991597,0.00034747628,0.00014557964,0.0002330452,0.000102676655,0.000011540806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011746938,0.00013033363,0.00018426687,0.000065012355,0.0004964414,0.000031977626,0.00020673178,0.000049620547,0.000049033322],"category_scores_gemma":[0.00004548895,0.000082630424,0.00007575455,0.0003383867,0.000059725535,0.00007293462,0.00007496258,0.00023160432,9.288139e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002840023,0.00016248567,0.0012418913,0.00004380409,0.00008783123,0.0000017164673,0.00017959127,0.002217429,0.99009013,0.000383903,0.00009408546,0.0052131326],"study_design_scores_gemma":[0.0025310752,0.00021127894,0.0017711198,0.000018420917,0.000119659795,0.000028754708,0.0003026453,0.00047289245,0.9356876,0.00005384165,0.058674574,0.00012815131],"about_ca_topic_score_codex":0.000018781755,"about_ca_topic_score_gemma":0.000015986667,"teacher_disagreement_score":0.058580488,"about_ca_system_score_codex":0.0000696092,"about_ca_system_score_gemma":0.00012719231,"threshold_uncertainty_score":0.38182756},"labels":[],"label_agreement":null},{"id":"W4220757942","doi":"10.3390/pathogens11030339","title":"The Outer Membrane Vesicles of Salmonella enterica Serovar Typhimurium Activate Chicken Immune Cells through Lipopolysaccharides and Membrane Proteins","year":2022,"lang":"en","type":"article","venue":"Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Natural Science Foundation of China","keywords":"Microbiology; Salmonella enterica; Salmonella; Immune system; Bacterial outer membrane; Biology; Phagocytosis; Monocyte; Spleen; Macrophage; Innate immune system; Secretion; Chemistry; Immunology; Bacteria; In vitro; Biochemistry","score_opus":0.011911678949550829,"score_gpt":0.21892132664882452,"score_spread":0.20700964769927369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220757942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99539787,0.0019268517,0.000029325696,0.0005556555,0.0011353459,0.0004062341,0.00021684347,0.00005425335,0.0002776483],"genre_scores_gemma":[0.99771523,0.0008092933,0.00012203405,0.000048729213,0.0000759129,0.000107918335,0.000037297636,0.000026997117,0.0010565663],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987451,0.00029068888,0.00035244616,0.00027330473,0.000032140524,0.00030636205],"domain_scores_gemma":[0.99921894,0.00013128958,0.00021030958,0.00037350866,0.000049102822,0.000016824193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028153684,0.00018962332,0.00031081607,0.000051812593,0.0007709644,0.000025625823,0.0002303787,0.00008711953,0.00057972403],"category_scores_gemma":[0.000022238086,0.00013807697,0.000113978276,0.0001687638,0.00016091076,0.00008866885,0.00032835998,0.00026413015,0.00002930334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024511555,0.00011053131,0.00017809267,0.000026150015,0.00018810277,0.0000026623309,0.0007567067,0.000006957247,0.9954919,0.00023454549,0.00011079628,0.0026484393],"study_design_scores_gemma":[0.0006021564,0.0002541858,0.0014915599,0.000010438795,0.00006116334,0.000118510936,0.0005140837,0.0000054524503,0.94531316,0.0001132315,0.05135694,0.0001591502],"about_ca_topic_score_codex":0.00034466013,"about_ca_topic_score_gemma":0.000017106235,"teacher_disagreement_score":0.051246144,"about_ca_system_score_codex":0.000019503488,"about_ca_system_score_gemma":0.000029117864,"threshold_uncertainty_score":0.63475716},"labels":[],"label_agreement":null},{"id":"W4220976326","doi":"10.1016/j.vaccine.2022.02.075","title":"Corrigendum to “A nested case-control study measuring pertussis vaccine effectiveness and duration of protection in Manitoba, Canada, 1992–2015: A Canadian Immunization Research Network Study” [Vaccine 37(48) (2019) 7132–7137]","year":2022,"lang":"en","type":"erratum","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary; University of Toronto; Public Health Ontario; University of Manitoba","funders":"","keywords":"Immunization; Medicine; Duration (music); Pertussis vaccine; Virology; Environmental health; Immunology; Antibody","score_opus":0.03552695961319517,"score_gpt":0.26599960075961415,"score_spread":0.23047264114641897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220976326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96385175,0.0030290238,0.00002893705,0.0005228941,0.02194025,0.010083728,0.00040506083,0.000072413255,0.00006594536],"genre_scores_gemma":[0.9935254,0.00012411857,0.0000042294478,0.000032245418,0.0006966069,0.0011097082,0.0006818681,0.00013283265,0.0036929767],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99185044,0.004302913,0.0013661997,0.0011205173,0.00019199368,0.001167929],"domain_scores_gemma":[0.9971915,0.0002770132,0.0005108213,0.0009763442,0.0008708921,0.00017344055],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0040075616,0.000713471,0.0015169121,0.0016643085,0.0015448554,0.00008937663,0.00043491257,0.0006387355,0.000851296],"category_scores_gemma":[0.00066031807,0.0006935542,0.000090153255,0.0025669448,0.00000998374,0.00021767533,0.00035919805,0.002174803,0.000016426346],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00655905,0.0020817176,0.5397643,0.00056289276,0.0025287601,0.00080196955,0.002242321,0.00097639486,0.014051994,0.000018904211,0.42118204,0.009229679],"study_design_scores_gemma":[0.007960052,0.0028910423,0.9412556,0.00028667971,0.00039645506,0.00067864085,0.003735602,0.00009103221,0.00015301553,0.0000068801646,0.041833583,0.0007113989],"about_ca_topic_score_codex":0.99210936,"about_ca_topic_score_gemma":0.9992547,"teacher_disagreement_score":0.40149134,"about_ca_system_score_codex":0.0019548847,"about_ca_system_score_gemma":0.0016545203,"threshold_uncertainty_score":0.999755},"labels":[],"label_agreement":null},{"id":"W4220976926","doi":"10.1128/iai.00565-21","title":"Characterization of the Phase-Variable Autotransporter Lav Reveals a Role in Host Cell Adherence and Biofilm Formation in Nontypeable Haemophilus influenzae","year":2022,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Health and Medical Research Council; National Institute on Deafness and Other Communication Disorders; Australian Research Council; National Institutes of Health; Medical Research Council; Children's Health Foundation","keywords":"Haemophilus influenzae; Biology; Phase variation; Microbiology; Haemophilus; Pasteurellaceae; Gene; Biofilm; Locus (genetics); Phenotype; Bacteria; Genetics","score_opus":0.012792605705485537,"score_gpt":0.23452333661375144,"score_spread":0.2217307309082659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220976926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988947,0.00013954191,0.000027163409,0.00003844557,0.00031373824,0.00026150222,0.000055191013,0.00001554288,0.0002541557],"genre_scores_gemma":[0.99950033,0.00013749705,0.0000040942346,0.00005008393,0.000005642235,0.00004630605,0.000090165006,0.0000047958442,0.0001611058],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992496,0.0002578949,0.00026929576,0.00009683248,0.000013480218,0.000112909554],"domain_scores_gemma":[0.9996767,0.000023117975,0.00013758031,0.00012632414,0.000028975393,0.000007282381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002743818,0.0000813574,0.00014769759,0.00013718828,0.0002450092,0.000012518746,0.00004881593,0.000081501224,0.00034559422],"category_scores_gemma":[0.000012777176,0.000070510876,0.000020650232,0.00029045765,0.000040481034,0.0002515269,0.00006686904,0.0002710802,0.000002849559],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008648667,0.00021182086,0.091910504,0.00003100582,0.000005532845,8.292067e-8,0.0006225203,0.000010588216,0.90648675,0.00008214594,0.000008280176,0.000544309],"study_design_scores_gemma":[0.002328018,0.0002758127,0.85258216,0.000037914444,0.000012985691,0.00004055454,0.00011634502,0.00007094573,0.1386899,0.0001169954,0.0056237304,0.000104647115],"about_ca_topic_score_codex":0.003877923,"about_ca_topic_score_gemma":0.00038187622,"teacher_disagreement_score":0.7677968,"about_ca_system_score_codex":0.000033440887,"about_ca_system_score_gemma":0.000019171943,"threshold_uncertainty_score":0.58622855},"labels":[],"label_agreement":null},{"id":"W4221007008","doi":"10.3389/fmicb.2022.856884","title":"Phylogenetic Structure and Comparative Genomics of Multi-National Invasive Haemophilus influenzae Serotype a Isolates","year":2022,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Centers for Disease Control and Prevention","keywords":"Clade; Biology; Phylogenetic tree; Subclade; Haemophilus influenzae; Virulence; Multilocus sequence typing; Comparative genomics; Genetics; Phylogenetics; Antibiotic resistance; Microbiology; Genome; Gene; Genomics; Genotype; Antibiotics","score_opus":0.02212881916997829,"score_gpt":0.24684251886124553,"score_spread":0.22471369969126725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221007008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929038,0.004576179,0.0000673633,0.00006022335,0.0013531448,0.0002784841,0.0007192094,0.000012164364,0.000029387962],"genre_scores_gemma":[0.9978394,0.00007719843,0.0014566653,0.00012398508,0.000018218705,0.000026329884,0.00033316415,0.000008122332,0.00011690559],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989188,0.00028024975,0.0003065367,0.00027173184,0.000006387543,0.00021632305],"domain_scores_gemma":[0.9995665,0.00006617171,0.00016522635,0.000111423826,0.000079459285,0.000011206483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011240315,0.00015585404,0.0003932432,0.00024376667,0.00017148978,0.0000046481064,0.00016058327,0.00016913931,0.0002469651],"category_scores_gemma":[0.000027076152,0.00015508046,0.000041992054,0.00016703474,0.00024829255,0.00003383309,0.00021509071,0.00029921922,0.000004776738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020888292,0.0000799624,0.05384737,0.000011099235,0.00016024758,4.992867e-7,0.00085812894,0.0005185587,0.9408264,0.00009017956,0.0032533421,0.00014532518],"study_design_scores_gemma":[0.0117450645,0.001749388,0.17064238,0.00003519586,0.00013285445,0.0012229314,0.0038842817,0.00022635517,0.67712814,0.0027587102,0.1293562,0.0011185152],"about_ca_topic_score_codex":0.000086759566,"about_ca_topic_score_gemma":0.00013414907,"teacher_disagreement_score":0.26369828,"about_ca_system_score_codex":0.0000965182,"about_ca_system_score_gemma":0.00010847502,"threshold_uncertainty_score":0.6323998},"labels":[],"label_agreement":null},{"id":"W4221124179","doi":"10.1111/jgs.17766","title":"Community‐acquired bacterial meningitis in patients of 80 years and older","year":2022,"lang":"en","type":"article","venue":"Journal of the American Geriatrics Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Rijksinstituut voor Volksgezondheid en Milieu; European Research Council; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Academisch Medisch Centrum; ZonMw","keywords":"Medicine; Streptococcus pneumoniae; Meningitis; Glasgow Coma Scale; Internal medicine; Diabetes mellitus; Glasgow Outcome Scale; Pneumonia; Case fatality rate; Prospective cohort study; Pediatrics; Sinusitis; Surgery; Epidemiology; Antibiotics","score_opus":0.007808856513611735,"score_gpt":0.22498801926031795,"score_spread":0.2171791627467062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221124179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838823,0.00015237591,0.0000035149374,0.00014161353,0.0011931926,0.000069397865,0.000037053484,0.0000031099994,0.000011540582],"genre_scores_gemma":[0.9996592,0.00009377792,0.00008538445,0.000058036505,0.00004165933,0.0000019667925,0.0000053381855,0.000007965636,0.00004667257],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989458,0.0005078857,0.00033952866,0.000052658736,0.000033950037,0.0001201839],"domain_scores_gemma":[0.9989321,0.00008875522,0.00076013705,0.00013861491,0.00006901327,0.00001138107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004785445,0.00007023999,0.0002783073,0.00005759152,0.00021435971,0.00000909354,0.00022830119,0.000032109965,0.00012959722],"category_scores_gemma":[0.00004377282,0.00005592911,0.00017480894,0.00035178193,0.00014532873,0.000055994253,0.0002986308,0.0003395731,4.688336e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074929744,0.0010802086,0.50201976,0.000023223274,0.00048109458,7.3466447e-7,0.010405038,0.00006130495,0.45195913,0.0000307413,0.022847574,0.010341885],"study_design_scores_gemma":[0.002095341,0.00068097445,0.98636544,0.000007702425,0.000052797182,0.000038978953,0.0019453397,0.0000010019214,0.0011228918,0.000039179806,0.0075681116,0.00008226957],"about_ca_topic_score_codex":0.00043039778,"about_ca_topic_score_gemma":0.0000051540937,"teacher_disagreement_score":0.48434567,"about_ca_system_score_codex":0.00006926645,"about_ca_system_score_gemma":0.000049953847,"threshold_uncertainty_score":0.2280723},"labels":[],"label_agreement":null},{"id":"W4221132182","doi":"10.1111/mmi.14900","title":"Aluminum hydroxide adjuvant diverts the uptake and trafficking of genetically detoxified pertussis toxin to lysosomes in macrophages","year":2022,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); Toronto Metropolitan University; The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; University of Toronto; Ryerson University","keywords":"Antigen; Adjuvant; Biology; Pertussis toxin; Endocytosis; Microbiology; Pinocytosis; Immunogenicity; Cell biology; Immunology; Biochemistry; Cell; G protein","score_opus":0.007429549068679754,"score_gpt":0.21480960954180842,"score_spread":0.20738006047312865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221132182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944709,0.0036179558,0.0000763118,0.0008772032,0.00044685794,0.00032335683,0.00007726023,0.000022282304,0.00008787955],"genre_scores_gemma":[0.99888897,0.00005559432,0.00011427429,0.00057053904,0.0000105103745,0.00006759894,0.00005644325,0.000017396773,0.00021869564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848956,0.00042162064,0.00037002208,0.00035512558,0.000011812329,0.00035188213],"domain_scores_gemma":[0.999509,0.0000876206,0.000084105726,0.0002687595,0.000029678198,0.000020851905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026175697,0.00017804526,0.00035213272,0.00017107298,0.00022122974,0.000009566822,0.0002623937,0.00013158385,0.00051969837],"category_scores_gemma":[0.00004876969,0.00013807896,0.00008755857,0.00022567829,0.000157817,0.000016777261,0.0004521056,0.00024301803,0.000016989152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112394744,0.00009320288,0.0009433244,0.0000065032764,0.00008755085,0.000012125066,0.00052586646,0.00012639457,0.9918971,0.00024229992,0.00038633012,0.0055669216],"study_design_scores_gemma":[0.0014807138,0.00060420664,0.021181436,0.000014850243,0.00006631687,0.00067708944,0.00055475114,0.00000787677,0.88773036,0.000057140274,0.08732312,0.0003021271],"about_ca_topic_score_codex":0.00017353108,"about_ca_topic_score_gemma":0.00010611152,"teacher_disagreement_score":0.10416672,"about_ca_system_score_codex":0.000033977074,"about_ca_system_score_gemma":0.000039344974,"threshold_uncertainty_score":0.56903327},"labels":[],"label_agreement":null},{"id":"W4225697226","doi":"10.1007/s00203-021-02623-w","title":"Penicillinase plasmid Australia type in Neisseria gonorrhoeae isolated in Poland","year":2022,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Uniwersytet Warszawski; Warszawski Uniwersytet Medyczny","keywords":"Neisseria gonorrhoeae; Plasmid; Microbiology; Beta-lactamase; Biology; Gonorrhea; Cephalosporin; Integron; Drug resistance; Gene; Genetics; Antibiotics; Virology; Escherichia coli","score_opus":0.015844793947652747,"score_gpt":0.2514617685693464,"score_spread":0.23561697462169362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225697226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787295,0.000510745,0.000003089105,0.00014914002,0.00089872896,0.000177867,0.0001368189,0.000016523583,0.00023414304],"genre_scores_gemma":[0.9986025,0.000056561385,0.000033945013,0.00003748669,0.000011046058,0.000017686187,0.00043572905,0.000010582142,0.0007944648],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99863994,0.0003823948,0.0003877631,0.0002604044,0.0000021097928,0.00032741376],"domain_scores_gemma":[0.99951756,0.00016081549,0.00011235742,0.00018673751,0.000010913154,0.000011600621],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012582235,0.00014098354,0.00033005644,0.00035045278,0.000079290265,0.0000026140235,0.00021836854,0.00010712752,0.0022723621],"category_scores_gemma":[0.00002641157,0.00013900884,0.00006114423,0.0002581725,0.00012729986,0.000031573483,0.00020702017,0.0003910222,0.00007047161],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009983225,0.00021765006,0.07438043,0.000008543561,0.000036639583,0.0000017563622,0.00042931692,0.00008869944,0.9229633,0.00026027567,0.00032966144,0.000285388],"study_design_scores_gemma":[0.011412942,0.0039271014,0.6063766,0.00007400128,0.00005195695,0.0012463839,0.0010539534,0.000045068933,0.14036596,0.0012713935,0.2332414,0.00093329046],"about_ca_topic_score_codex":0.0015709994,"about_ca_topic_score_gemma":0.001361424,"teacher_disagreement_score":0.78259736,"about_ca_system_score_codex":0.00002337744,"about_ca_system_score_gemma":0.00005040724,"threshold_uncertainty_score":0.9986397},"labels":[],"label_agreement":null},{"id":"W4226191600","doi":"10.1101/2022.04.06.487353","title":"Bps polysaccharide of <i>Bordetella pertussis</i> resists antimicrobial peptides by functioning as a dual surface shield and decoy and converts <i>Escherichia coli</i> into a respiratory pathogen","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Ohio State University","keywords":"Microbiology; Bordetella pertussis; Biology; Pathogen; Antimicrobial peptides; Escherichia coli; Antimicrobial; Bacteria; Gene; Biochemistry","score_opus":0.008829840684062125,"score_gpt":0.21177572292155647,"score_spread":0.20294588223749435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226191600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98784953,0.00866157,0.00003127029,0.00018750069,0.0017969229,0.00060060003,0.00066882,0.00019312967,0.000010672525],"genre_scores_gemma":[0.99750257,0.0012730802,0.00037203386,0.0004758753,0.00011960944,0.00008829006,0.000004689951,0.000111423215,0.000052450454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969634,0.00051359006,0.0007866185,0.0011285691,0.00007441047,0.00053343386],"domain_scores_gemma":[0.9980552,0.00021322045,0.00061338104,0.0007421351,0.00025294357,0.00012309098],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00072375673,0.00064175157,0.0009170676,0.00021581068,0.00063100905,0.00015557118,0.00027781655,0.000830088,0.00026537883],"category_scores_gemma":[0.00020943441,0.0006986899,0.00014241856,0.00035207163,0.00037244667,0.00017555023,0.00096823723,0.0010015129,0.000016883061],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033983652,0.00015325523,0.02179447,0.0003275107,0.00038091952,0.000011676741,0.00009497769,0.000005107402,0.9743921,0.00007893113,0.0024162529,0.0000049655064],"study_design_scores_gemma":[0.0015895463,0.00036205235,0.020738386,0.0002951899,0.0003464141,0.0000010181615,0.000060139842,0.000004989952,0.9344351,0.0000026229982,0.04115112,0.0010133733],"about_ca_topic_score_codex":0.0011031058,"about_ca_topic_score_gemma":0.00003757446,"teacher_disagreement_score":0.03995695,"about_ca_system_score_codex":0.000113153525,"about_ca_system_score_gemma":0.00052084087,"threshold_uncertainty_score":0.9995464},"labels":[],"label_agreement":null},{"id":"W4226292360","doi":"","title":"Burden of Pertussis in Individuals with a Diagnosis of Asthma: A Retrospective Database Study in England","year":2022,"lang":"en","type":"article","venue":"Dove Medical Press (Taylor and Francis Group)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"","keywords":"Medicine; Asthma; Incidence (geometry); Pediatrics; Retrospective cohort study; Emergency department; Confidence interval; Cohort; Diagnosis code; Cohort study; Rate ratio; Internal medicine; Population; Psychiatry; Environmental health","score_opus":0.011937610472518321,"score_gpt":0.24802697188003975,"score_spread":0.23608936140752143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226292360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967692,0.0018206302,0.00027288962,0.000084937965,0.00020929158,0.00043448844,0.00032109598,0.000009386458,0.00007808182],"genre_scores_gemma":[0.9995043,0.0000143594425,0.000012294826,0.000019268458,0.00003102998,0.00033794754,0.00006866885,0.000009794983,0.0000023085076],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986162,0.00037806496,0.000408215,0.00030417027,0.000091272894,0.00020207526],"domain_scores_gemma":[0.9993113,0.00028751182,0.0001267589,0.00020834831,0.000033062817,0.000032986798],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00075445307,0.00013726558,0.00050253124,0.00018691928,0.000071598304,0.0000053879335,0.00017450844,0.00010039906,0.0013552982],"category_scores_gemma":[0.00024651003,0.00010308619,0.00003567121,0.0003006779,0.00015198461,0.00007910773,0.00027512692,0.00044828953,7.489224e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000457275,0.0016871557,0.9557606,0.000041273797,0.00015514666,0.00001598227,0.007331789,0.000006636981,0.0020147634,0.00014357784,0.000009502772,0.03237632],"study_design_scores_gemma":[0.016275123,0.0033441673,0.97162235,0.000018541816,0.00008727871,0.000055534478,0.004006219,0.00053167745,0.0010229683,0.00008870911,0.0026618321,0.00028561466],"about_ca_topic_score_codex":0.008024398,"about_ca_topic_score_gemma":0.0020819597,"teacher_disagreement_score":0.032090705,"about_ca_system_score_codex":0.000022868377,"about_ca_system_score_gemma":0.000003313689,"threshold_uncertainty_score":0.9995576},"labels":[],"label_agreement":null},{"id":"W4229482496","doi":"10.1148/cases.20201125","title":"Brain abscess","year":2020,"lang":"it","type":"standard","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Brain abscess; Abscess; Medicine; Surgery","score_opus":0.018118184092382826,"score_gpt":0.26902168544167554,"score_spread":0.25090350134929273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229482496","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026801253,0.018364875,0.0020709585,0.099984,0.10454888,0.0023909835,0.008688419,0.0013883358,0.7357623],"genre_scores_gemma":[0.06771852,0.0051094545,0.00011207902,0.0058706407,0.0049973866,0.000069608715,0.0060036695,0.00019460848,0.90992403],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99779075,0.00027329518,0.00061680964,0.0007276477,0.000022181994,0.0005693327],"domain_scores_gemma":[0.9988096,0.000240178,0.00025139307,0.00045186366,0.00017322775,0.00007374454],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016847147,0.00058107544,0.0009830801,0.00015548068,0.00042419098,0.000107622225,0.00041060292,0.0016032053,0.10585166],"category_scores_gemma":[0.00017297194,0.00049377076,0.000389854,0.00026476948,0.00017657004,0.00009407452,0.00028312212,0.001137861,0.0124586355],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026968322,0.000084505984,0.00007696394,0.00014712647,0.00074253243,0.000006049341,0.00016418412,2.555981e-7,0.077466495,0.003387358,0.910939,0.0067158793],"study_design_scores_gemma":[0.0013947833,0.00042048504,0.00045683415,0.000104260616,0.00016886473,0.00008863044,0.00013263544,8.540062e-7,0.0049999347,0.00013048743,0.99153125,0.0005709518],"about_ca_topic_score_codex":0.0005336923,"about_ca_topic_score_gemma":0.0001855787,"teacher_disagreement_score":0.17416173,"about_ca_system_score_codex":0.000067943765,"about_ca_system_score_gemma":0.00029375893,"threshold_uncertainty_score":0.9997514},"labels":[],"label_agreement":null},{"id":"W4230541488","doi":"10.1371/annotation/900641dd-0b06-4a77-9e2c-b7161dd49e1d","title":"Correction: Construction of Opa-Positive and Opa-Negative Strains of Neisseria meningitidis to Evaluate a Novel Meningococcal Vaccine","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Sanofi Pasteur; University of Oxford; Action Medical Research; National Institute for Health and Care Research; Sanofi; GlaxoSmithKline; Pfizer","keywords":"Neisseria meningitidis; Microbiology; Meningococcal vaccine; Virology; Neisseriaceae; Biology; Genetics; Bacteria; Antibiotics","score_opus":0.025855820969736428,"score_gpt":0.24327211297986126,"score_spread":0.21741629201012483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230541488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99781376,0.000062369894,0.00021658464,0.00023625728,0.00033450223,0.0005160436,0.00007278187,0.000028333789,0.0007193583],"genre_scores_gemma":[0.99773073,0.000022063297,0.001623802,0.0000142182635,0.00004105517,0.000056281777,0.000029824616,0.000011173473,0.00047086843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992194,0.000077801196,0.00031760757,0.00020490904,0.000020491392,0.00015979627],"domain_scores_gemma":[0.9990983,0.00011973077,0.00018301119,0.00012857118,0.0004394785,0.000030916126],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001050253,0.00013579264,0.0003800282,0.0001291356,0.000094543684,0.000011186786,0.000055812598,0.000116810064,0.001083372],"category_scores_gemma":[0.00015865052,0.00012512645,0.000038724174,0.00018825788,0.000081782084,0.00014990609,0.00005614876,0.0001223714,0.000031169628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016706449,0.00045460268,0.0029244872,0.000024388532,0.0004986743,5.1293306e-8,0.0005542378,0.000002604083,0.9932102,0.00038579147,0.00015828847,0.0016196298],"study_design_scores_gemma":[0.0014982973,0.000947453,0.118256696,0.00020352863,0.00018901397,0.00003891643,0.00078316574,0.000058265745,0.8777737,0.000091730464,0.00002777526,0.00013143654],"about_ca_topic_score_codex":0.00081972225,"about_ca_topic_score_gemma":0.00005419652,"teacher_disagreement_score":0.11543646,"about_ca_system_score_codex":0.0000229909,"about_ca_system_score_gemma":0.000031840416,"threshold_uncertainty_score":0.99982977},"labels":[],"label_agreement":null},{"id":"W4231301752","doi":"10.22374/cjgim.v10i2.35","title":"A <i>Streptococcus Intermedius</i> Brain Abscess Causing Obstructive Hydrocephalus and Meningoventriculitis in an Adult Patient With Chronic Granulomatous Disease","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of General Internal Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Calgary","funders":"","keywords":"Chronic granulomatous disease; Medicine; Hydrocephalus; Brain abscess; Streptococcus intermedius; Immunodeficiency; Abscess; Population; Immunology; Streptococcus; Streptococcus pneumoniae; Pathology; Antibiotics; Surgery; Microbiology; Immune system; Bacteria; Biology","score_opus":0.00954932862281542,"score_gpt":0.23660506792774452,"score_spread":0.22705573930492912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231301752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337775,0.0032383562,0.00006515961,0.0016091148,0.0014318734,0.00013603784,0.000025234976,0.0000056691097,0.00011078238],"genre_scores_gemma":[0.99907357,0.000024030825,0.000022460816,0.00030610635,0.00041066812,0.0000067330907,0.00001932043,0.000014998568,0.00012210112],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988927,0.00012316811,0.00045216497,0.00017576039,0.000041910596,0.00031429864],"domain_scores_gemma":[0.99871844,0.000032004835,0.00027207515,0.00010913606,0.00032611593,0.0005422376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013963421,0.00018185005,0.00034525478,0.00036458892,0.00007218802,0.000029084982,0.00011951699,0.00007666445,0.0001431328],"category_scores_gemma":[0.00015533865,0.0001262147,0.000034471817,0.00014535447,0.00025185698,0.00023343251,0.000017989449,0.00030978094,0.0000022172646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004924651,0.00030012103,0.6450389,0.00018951461,0.0010394317,0.013598256,0.021000868,0.0004984998,0.1932238,0.0010901883,0.035700094,0.083395645],"study_design_scores_gemma":[0.06335592,0.034856573,0.67356884,0.012059789,0.0009372383,0.0828313,0.010685283,0.0006795402,0.034289263,0.0026183594,0.08155147,0.0025664167],"about_ca_topic_score_codex":0.02553074,"about_ca_topic_score_gemma":0.09476199,"teacher_disagreement_score":0.15893455,"about_ca_system_score_codex":0.00033354017,"about_ca_system_score_gemma":0.00056804833,"threshold_uncertainty_score":0.98095834},"labels":[],"label_agreement":null},{"id":"W4232144922","doi":"10.1093/pch/18.suppl_a.18aa","title":"Seizures after Pneumococcal Conjugate and Meningococcal Serogroup C Conjugate Vaccines in Canadian Children","year":2013,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Izaak Walton Killam Health Centre","funders":"","keywords":"Conjugate; Meningococcal vaccine; Medicine; Pneumococcal conjugate vaccine; Conjugate vaccine; Virology; Pediatrics; Pneumococcal disease; Meningococcal disease; Meningitis; Streptococcus pneumoniae; Neisseria meningitidis; Immunization; Immunology; Microbiology; Antibiotics; Biology; Antibody; Mathematics","score_opus":0.0056855057261055945,"score_gpt":0.22673932615547976,"score_spread":0.22105382042937416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232144922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844796,0.0078073433,0.0000027809608,0.005641961,0.00074395735,0.00089422136,0.00010739273,0.00007607932,0.00024666628],"genre_scores_gemma":[0.99596167,0.001942848,0.000036001442,0.0013144836,0.00030370994,0.00013835264,0.0001832168,0.000031957537,0.00008775829],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977714,0.00022467699,0.00053007854,0.0004515634,0.000022721191,0.000999592],"domain_scores_gemma":[0.99919385,0.000081780796,0.00013706743,0.00024375913,0.00007055143,0.0002730148],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038183364,0.00029524014,0.00045985595,0.00042983826,0.0003852415,0.000077797755,0.0001424611,0.00030797636,0.0006727529],"category_scores_gemma":[0.000051342628,0.00026260308,0.00006629692,0.0003254177,0.000063131134,0.0002118731,0.00008709051,0.00054357044,0.0003808759],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046177633,0.0000850105,0.99146533,0.00003619754,0.000056492474,0.0000026867044,0.0004912089,0.000002374176,0.00083370943,0.00035739233,0.0022201273,0.0044032736],"study_design_scores_gemma":[0.0014511964,0.00018767055,0.98246044,0.000025129399,0.000017302782,0.00017467645,0.000045126963,0.0000075690987,0.00008073906,0.00012196673,0.015152379,0.00027581584],"about_ca_topic_score_codex":0.4208028,"about_ca_topic_score_gemma":0.24008137,"teacher_disagreement_score":0.18072145,"about_ca_system_score_codex":0.0001227142,"about_ca_system_score_gemma":0.00026257927,"threshold_uncertainty_score":0.9999826},"labels":[],"label_agreement":null},{"id":"W4232801246","doi":"10.7326/acpjc-2003-138-3-060","title":"Dexamethasone improved disability in acute bacterial meningitis","year":2003,"lang":"en","type":"article","venue":"ACP Journal Club","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Dexamethasone; Meningitis; Bacterial meningitis; Citation; Microbiology; Internal medicine; Pediatrics; Library science; Biology","score_opus":0.012828246689784866,"score_gpt":0.2609719037034097,"score_spread":0.24814365701362487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232801246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951785,0.00028574286,0.00007784131,0.00025286406,0.0035430486,0.00010778883,0.000013118805,0.000024136843,0.0005169177],"genre_scores_gemma":[0.9989506,0.00012945401,0.00023980785,0.00002963959,0.00013398362,0.000008715548,0.000014288849,0.000012860422,0.00048066958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870425,0.0003802569,0.0003797784,0.00018054438,0.000012259587,0.00034291024],"domain_scores_gemma":[0.99949616,0.0001068758,0.00012747601,0.00017823128,0.000055369932,0.000035895577],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00055529707,0.00014576182,0.00027133562,0.00006285168,0.00020605832,0.00005594347,0.00012098757,0.0002029372,0.0037040089],"category_scores_gemma":[0.0002181703,0.00011945443,0.00010626379,0.00014878254,0.00008726606,0.0002166599,0.000034452187,0.00048177468,0.00010057243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018755632,0.00017175861,0.021033904,0.0000026041614,0.00012687308,0.000004919419,0.000114890245,5.632538e-7,0.97254795,0.0002051895,0.00074245635,0.0048613637],"study_design_scores_gemma":[0.010154301,0.0011033502,0.2552608,0.000063058884,0.00019235515,0.005810691,0.00032930748,0.0000028021234,0.41009688,0.0025973655,0.31365585,0.000733238],"about_ca_topic_score_codex":0.00013173457,"about_ca_topic_score_gemma":0.00017345214,"teacher_disagreement_score":0.56245106,"about_ca_system_score_codex":0.00008341066,"about_ca_system_score_gemma":0.0000509565,"threshold_uncertainty_score":0.99720675},"labels":[],"label_agreement":null},{"id":"W4233642983","doi":"10.14745/ccdr.v44i09a04","title":"Vaccine safety surveillance in Canada: Reports to CAEFISS, 2013–2016","year":2018,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Adverse effect; Vaccination; Rash; Immunization; Pediatrics; Pharmacovigilance; Family medicine; Internal medicine; Immunology; Immune system","score_opus":0.007651426020642359,"score_gpt":0.21911943562688604,"score_spread":0.21146800960624368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233642983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98705065,0.0025253189,0.0000081054,0.004032793,0.0029481032,0.00036976015,0.00015046232,0.000043046035,0.0028717336],"genre_scores_gemma":[0.99529386,0.00014517627,0.00001655656,0.00055030995,0.00007501206,0.000042341406,0.0004007627,0.000024678704,0.0034513166],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979969,0.00019750609,0.00081541325,0.0003968092,0.000054095286,0.0005392708],"domain_scores_gemma":[0.9973382,0.00010047875,0.00024530216,0.0018280224,0.00028086724,0.0002071415],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042080984,0.00022994552,0.0004649791,0.00007261388,0.00034786886,0.000015085103,0.00031052157,0.00007484649,0.0013098218],"category_scores_gemma":[0.0003664034,0.00021742427,0.00004803083,0.00032471083,0.000039327002,0.00007286593,0.00027540277,0.00023641186,0.00001962768],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026381956,0.00006577651,0.5351983,0.000016545278,0.00009697761,0.0010575956,0.000014993675,0.00004272405,0.0029429412,0.00002907238,0.4594429,0.0008283984],"study_design_scores_gemma":[0.00023472286,0.000015488407,0.40976682,0.000036921247,0.000010262221,0.00044470074,0.000033758926,0.0000025583593,0.00032658805,0.000009994287,0.58892906,0.00018910713],"about_ca_topic_score_codex":0.9997293,"about_ca_topic_score_gemma":0.99998,"teacher_disagreement_score":0.12948616,"about_ca_system_score_codex":0.0012063687,"about_ca_system_score_gemma":0.012155456,"threshold_uncertainty_score":0.9996031},"labels":[],"label_agreement":null},{"id":"W4234427497","doi":"10.1139/w01-008","title":"The panmictic nature of<i>Neisseria meningitidis</i>serogroup B during a period of endemic disease in Canada","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"World Health Organization","keywords":"Serotype; Biology; Neisseria meningitidis; Genetic diversity; Microbiology; Genotype; Molecular epidemiology; Veterinary medicine; Genetics; Bacteria; Gene; Population; Medicine","score_opus":0.0046410995970610856,"score_gpt":0.19182356600271816,"score_spread":0.18718246640565708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234427497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98654425,0.011003997,9.901188e-7,0.00054717436,0.0016853698,0.00008563122,0.00009744844,0.0000017447043,0.000033413326],"genre_scores_gemma":[0.9995071,0.0002753794,0.0000059193394,0.000037627604,0.000043694137,0.0000022073268,0.000017857366,0.000010418751,0.00009974014],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986975,0.00018904505,0.00059537974,0.00011668943,0.0000073650494,0.0003939952],"domain_scores_gemma":[0.9990752,0.00010368524,0.00038443378,0.00018016911,0.00015605023,0.00010045939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020324803,0.00013705083,0.00036405819,0.00020278305,0.00015422504,0.000006929207,0.00030513253,0.0001893776,0.00027068285],"category_scores_gemma":[0.00013909227,0.000102077494,0.00010407418,0.00019364896,0.00017635479,0.00005299422,0.000020620302,0.00050370576,0.0000024988606],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023630324,0.0000131138595,0.23785444,0.000015248113,0.0001239916,0.000044427667,0.00013510651,0.000022177192,0.76067054,0.00011153698,0.0005536572,0.00021944544],"study_design_scores_gemma":[0.0036141302,0.00036075176,0.7568186,0.0003074941,0.00016988086,0.007296206,0.00177209,0.0000015780673,0.08910893,0.00015461829,0.13995297,0.00044272954],"about_ca_topic_score_codex":0.54486144,"about_ca_topic_score_gemma":0.96977043,"teacher_disagreement_score":0.6715616,"about_ca_system_score_codex":0.00026381985,"about_ca_system_score_gemma":0.003260433,"threshold_uncertainty_score":0.5783868},"labels":[],"label_agreement":null},{"id":"W4234967311","doi":"10.1016/j.vaccine.2012.02.013","title":"Humoral immunity 10 years after booster immunization with an adolescent and adult formulation combined tetanus, diphtheria, and 5-component acellular pertussis vaccine","year":2012,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Sanofi (Canada)","funders":"","keywords":"Diphtheria; Tetanus; Medicine; Antitoxin; Booster dose; Immunization; Toxoid; Immunology; Vaccination; Immunity; Pediatrics; Antigen; Immune system; Biology; Microbiology; Toxin","score_opus":0.008537849334147578,"score_gpt":0.21400646890593725,"score_spread":0.20546861957178966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234967311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99708706,0.0019693023,0.000065502725,0.00021132089,0.00023632254,0.0003365711,0.000019046885,0.000054054115,0.000020795691],"genre_scores_gemma":[0.99839246,0.00018590293,0.00015664971,0.000082096725,0.00008661108,0.000020167869,0.0006628229,0.000030765128,0.00038250574],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99903405,0.00015739923,0.0002661744,0.00021168609,0.000022052951,0.0003086286],"domain_scores_gemma":[0.9993766,0.000023637118,0.00011230623,0.00031798682,0.00010960981,0.000059853377],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015947911,0.00022787867,0.00028569487,0.000114980045,0.00020190275,0.000042460375,0.00007067663,0.00016616071,0.0012451989],"category_scores_gemma":[0.000014793743,0.0001748694,0.000030345576,0.00012005407,0.000013616303,0.00048140602,0.00009957662,0.00017435139,0.00003087399],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004749703,0.0008517491,0.45694232,0.000066188135,0.00022203845,0.0000016887764,0.0013833939,0.0000021171786,0.5263453,0.00021124276,0.00034777512,0.008876469],"study_design_scores_gemma":[0.0042071976,0.0007226104,0.9727517,0.00004917108,0.00012218588,0.00009392043,0.00018709005,0.00002984558,0.012111495,0.000017592047,0.009431722,0.0002754989],"about_ca_topic_score_codex":0.00024603307,"about_ca_topic_score_gemma":0.00007899199,"teacher_disagreement_score":0.51580936,"about_ca_system_score_codex":0.000028302642,"about_ca_system_score_gemma":0.000009000156,"threshold_uncertainty_score":0.9996678},"labels":[],"label_agreement":null},{"id":"W4236104156","doi":"10.14745/ccdr.v36i00as2","title":"Advice for Consideration of Quadrivalent (A, C, Y, W135) Meningococcal Conjugate Vaccine, for use by Provinces and Territories","year":2010,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Conjugate; Virology; Advice (programming); Meningococcal vaccine; Medicine; Immunization; Immunology; Computer science; Mathematics; Antigen; Programming language","score_opus":0.011270902476153245,"score_gpt":0.24822645942900493,"score_spread":0.23695555695285167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236104156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957043,0.0008674438,0.000079469704,0.00067647273,0.0009611362,0.0007321933,0.0009101009,0.000031904332,0.00003696792],"genre_scores_gemma":[0.99727064,0.00004511125,0.00042277933,0.000062051186,0.000038166894,0.00024822386,0.0011669284,0.000014312065,0.00073179393],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991694,0.000050469534,0.000394369,0.00018484665,0.000017909599,0.00018301893],"domain_scores_gemma":[0.99855614,0.0003839173,0.0002411354,0.00046613635,0.0002909127,0.00006174578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018416901,0.00012938445,0.00027092115,0.000025042542,0.00033564892,0.00003508176,0.00010652462,0.00008741295,0.000038063663],"category_scores_gemma":[0.0004651665,0.00011745283,0.000051586256,0.000029219518,0.00007766072,0.00014975129,0.00006105051,0.000114505965,1.1719877e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012010557,0.0002923256,0.1788203,0.0003310596,0.0004473967,0.0000062678087,0.00007999116,0.000004345222,0.63706785,0.0027884492,0.17767164,0.0012893173],"study_design_scores_gemma":[0.0015399429,0.000117264135,0.018704664,0.000033052656,0.0001666168,0.00008567474,0.00011427624,0.00007484738,0.035199273,0.00013566234,0.94360304,0.00022569107],"about_ca_topic_score_codex":0.31682298,"about_ca_topic_score_gemma":0.65881264,"teacher_disagreement_score":0.76593137,"about_ca_system_score_codex":0.000027004082,"about_ca_system_score_gemma":0.0006946232,"threshold_uncertainty_score":0.6877264},"labels":[],"label_agreement":null},{"id":"W4236288586","doi":"10.14745/ccdr.v39i00a01f","title":"Mise à jour sur l'utilisation des vaccins conjugués quadrivalents contre le méningocoque","year":2013,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Philosophy","score_opus":0.015159596364046414,"score_gpt":0.2144843479981218,"score_spread":0.1993247516340754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236288586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93799704,0.050346777,0.00040344757,0.0033913767,0.0033852805,0.00073910743,0.00026517193,0.0000991914,0.0033725759],"genre_scores_gemma":[0.93592566,0.01604554,0.00021894953,0.00019353026,0.00032304923,0.00009383169,0.00014041558,0.00008263548,0.04697636],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99662435,0.0005047628,0.0008601621,0.0005955247,0.000071606766,0.0013436015],"domain_scores_gemma":[0.99808234,0.0003745186,0.00026556625,0.00044645448,0.0005426051,0.00028849632],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022319703,0.0006410836,0.0007926835,0.00017056368,0.0013817598,0.00015127129,0.00035999384,0.0006063434,0.009857007],"category_scores_gemma":[0.0001380427,0.0006398932,0.00025829533,0.00035684658,0.0006312028,0.0007065643,0.00004982611,0.00054308516,0.00016817832],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007256363,0.0013834366,0.295119,0.012365086,0.0041284226,0.00008774489,0.0053494032,0.0005297432,0.32049078,0.010293583,0.14245242,0.20707475],"study_design_scores_gemma":[0.0043013813,0.00042689615,0.4956823,0.003788424,0.00041259913,0.0004966632,0.0023747222,0.00015298714,0.028707845,0.0011044389,0.46140152,0.0011502185],"about_ca_topic_score_codex":0.9662174,"about_ca_topic_score_gemma":0.98084676,"teacher_disagreement_score":0.3189491,"about_ca_system_score_codex":0.0007610033,"about_ca_system_score_gemma":0.0027020092,"threshold_uncertainty_score":0.9999183},"labels":[],"label_agreement":null},{"id":"W4236583399","doi":"10.3410/f.718509172.793498108","title":"Faculty Opinions recommendation of The impact of the meningococcal serogroup C conjugate vaccine in Canada between 2002 and 2012.","year":2014,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Conjugate; Meningococcal vaccine; Meningococcal meningitis; Virology; Medicine; Conjugate vaccine; Neisseria meningitidis; Biology; Immunology; Immunization; Antigen; Mathematics; Genetics","score_opus":0.020616137554432246,"score_gpt":0.31927497945242267,"score_spread":0.2986588418979904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236583399","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00048340822,0.0011707033,0.0000018432452,0.059130523,0.0011627775,0.0010533257,0.9369764,0.0000073886235,0.000013651701],"genre_scores_gemma":[0.0019615286,0.00020827113,0.000012295058,0.00048563685,0.00011876536,0.00007303339,0.99671865,0.000014079877,0.0004077575],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99690133,0.0009113384,0.0013412423,0.0003784715,0.00016820853,0.00029940516],"domain_scores_gemma":[0.9955465,0.00021559202,0.0014987551,0.0010900982,0.0015770381,0.0000719882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009023523,0.00039194385,0.0009426387,0.0001486127,0.00023202224,0.00003472564,0.0011408255,0.00057186093,0.00067855796],"category_scores_gemma":[0.0018578677,0.00018176314,0.0004278909,0.0011417442,0.0002225548,0.00016316684,0.00057136634,0.0010198727,0.000007806202],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014872979,0.000100242374,0.0011496127,0.00091451843,0.00022610594,1.2615334e-8,0.000041791387,1.9049608e-7,0.000060374223,0.000031253625,0.99666303,0.00079800846],"study_design_scores_gemma":[0.0007710572,0.0000797712,0.1396933,0.0029924163,0.00013275252,0.000023292954,0.00001221733,0.0000010792807,0.00006989058,0.0000063428793,0.8560649,0.00015293456],"about_ca_topic_score_codex":0.077739395,"about_ca_topic_score_gemma":0.016835067,"teacher_disagreement_score":0.14059807,"about_ca_system_score_codex":0.0001645273,"about_ca_system_score_gemma":0.0009067093,"threshold_uncertainty_score":0.9394363},"labels":[],"label_agreement":null},{"id":"W4239124536","doi":"10.5222/j.child.2019.40427","title":"Meningococcal vaccines","year":2019,"lang":"en","type":"article","venue":"Çocuk Dergisi / Journal of Child","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stantec (Canada)","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Medicine; Meningococcal vaccine; Conjugate vaccine; Asymptomatic; Disease; Pediatrics; Immunology; Immunization; Internal medicine; Antigen; Biology; Bacteria","score_opus":0.005221718679989786,"score_gpt":0.22292139955796852,"score_spread":0.21769968087797875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239124536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98672897,0.0022544432,0.000053629563,0.0017908284,0.0035976714,0.00008235072,0.0000031244854,0.000019667672,0.0054693283],"genre_scores_gemma":[0.9975679,0.00016526524,0.00004347635,0.00019357182,0.0003280495,9.5191206e-7,0.000004985369,0.000014182727,0.0016816106],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99916315,0.000081486454,0.00042027285,0.000109369365,0.000020643436,0.00020509958],"domain_scores_gemma":[0.9992671,0.00007589307,0.0003044129,0.00016695511,0.00015780969,0.000027844422],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002222367,0.00013109429,0.0003195657,0.00016375564,0.00010337488,0.000026537153,0.00018858841,0.00015028974,0.0035201835],"category_scores_gemma":[0.00005118311,0.00009581351,0.00017769792,0.00011770001,0.000019426474,0.00021422635,0.000043443775,0.00035648816,0.000661877],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007821141,0.00039006313,0.060814675,0.000030342098,0.00091841206,0.000010636205,0.0003243268,0.00007826739,0.85969263,0.0030377072,0.06391919,0.010001616],"study_design_scores_gemma":[0.0037120085,0.00071171595,0.058463454,0.00011901589,0.00008607585,0.0032619373,0.00011204651,0.0000016959451,0.078222185,0.00031673463,0.8547605,0.0002326204],"about_ca_topic_score_codex":0.000012409609,"about_ca_topic_score_gemma":0.000005024073,"teacher_disagreement_score":0.79084134,"about_ca_system_score_codex":0.000017026392,"about_ca_system_score_gemma":0.000034862554,"threshold_uncertainty_score":0.99739075},"labels":[],"label_agreement":null},{"id":"W4239359608","doi":"10.3410/f.8190959.8604057","title":"Faculty Opinions recommendation of Ceftriaxone-resistant Neisseria gonorrhoeae, Japan.","year":2011,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Neisseria gonorrhoeae; Ceftriaxone; Microbiology; Neisseria; Medicine; Virology; Antibiotics; Internal medicine; Biology; Bacteria; Genetics","score_opus":0.03592695471656553,"score_gpt":0.32885483673091015,"score_spread":0.2929278820143446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239359608","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008959844,0.002334195,0.000008734139,0.044081066,0.003856472,0.0012743438,0.9482567,0.000056645265,0.00012289885],"genre_scores_gemma":[0.000034862955,0.0006205812,0.000124058,0.0010766123,0.00025702323,0.00024148934,0.99516124,0.00003127786,0.0024528604],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960272,0.0007188427,0.0019782116,0.00070209906,0.00012604463,0.0004476297],"domain_scores_gemma":[0.99145323,0.00014160767,0.002014505,0.0016556939,0.004606373,0.00012859075],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011337643,0.00062800036,0.0012525065,0.00043190326,0.00037237635,0.00008361622,0.0015166876,0.0013479214,0.0040803673],"category_scores_gemma":[0.003835927,0.0004039238,0.0008006031,0.0015966779,0.0003846507,0.00033444652,0.0005298818,0.0011977903,0.00029733047],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006853101,0.0005589932,0.0000070193146,0.0030621777,0.0003637088,2.7609328e-8,0.000087010674,1.2724567e-8,0.00019121222,0.00044425623,0.9939009,0.0013161582],"study_design_scores_gemma":[0.0010008715,0.00025889822,0.0026845261,0.0046388037,0.0003389765,0.00005471218,0.000035519985,1.999819e-7,0.00016488005,0.00002242634,0.9904108,0.00038936126],"about_ca_topic_score_codex":0.00041558128,"about_ca_topic_score_gemma":0.000034594923,"teacher_disagreement_score":0.046904553,"about_ca_system_score_codex":0.00008868829,"about_ca_system_score_gemma":0.0004497647,"threshold_uncertainty_score":0.99994856},"labels":[],"label_agreement":null},{"id":"W4239704361","doi":"10.2139/ssrn.3532518","title":"&lt;i&gt;Neisseria gonorrhoeae&lt;/i&gt; Isolates in Shanghai Exhibited Reduced Susceptibility to Extended-Spectrum Cephalosporins and Clonal Expansion","year":2020,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Neisseria gonorrhoeae; Cephalosporin; Microbiology; Biology; Physics; Antibiotics","score_opus":0.009405526098614685,"score_gpt":0.2338393526045387,"score_spread":0.224433826505924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239704361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894908,0.0049657105,0.00023766836,0.0041498416,0.00057960843,0.00032219585,0.000016214126,0.0000900488,0.00014791232],"genre_scores_gemma":[0.99669164,0.0022130068,0.00003240588,0.0002178729,0.00028266982,0.00001523092,0.000046361645,0.000038028396,0.00046277425],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965815,0.00025491382,0.0006026945,0.00058249646,0.00002314947,0.0019552321],"domain_scores_gemma":[0.9992758,0.00006278254,0.00017458276,0.00023965644,0.00010871326,0.00013846757],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007965756,0.0003478908,0.00048743217,0.00023036974,0.00034766545,0.00006493055,0.00025602424,0.00030599663,0.00060001033],"category_scores_gemma":[0.0001281541,0.0003155536,0.0001428968,0.00048969703,0.000074581825,0.00027646756,0.00013677223,0.0015001838,0.00014241665],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009111587,0.00018854272,0.003402876,0.000009863522,0.00012788926,0.0000015120825,0.00042456755,0.000009357016,0.9817779,0.008604179,0.00029472428,0.004247442],"study_design_scores_gemma":[0.018386025,0.015483995,0.62762785,0.0003287253,0.00040190082,0.006340404,0.003449308,0.00017506331,0.1750857,0.052343693,0.09693231,0.003445006],"about_ca_topic_score_codex":0.000089573645,"about_ca_topic_score_gemma":0.0036715108,"teacher_disagreement_score":0.8066922,"about_ca_system_score_codex":0.00043762283,"about_ca_system_score_gemma":0.0006686862,"threshold_uncertainty_score":0.99992967},"labels":[],"label_agreement":null},{"id":"W4240100107","doi":"10.31525/ct1-nct04184336","title":"Enhanced Population-based Core Surveillance of Meningococcal Invasive Infections at Participating Centers Across Canada","year":2019,"lang":"en","type":"article","venue":"Case Medical Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Population; Meningococcal Infections; Neisseria meningitidis; Geography; Meningococcal disease; Environmental health; Biology","score_opus":0.05609018320145134,"score_gpt":0.38327146181531413,"score_spread":0.3271812786138628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240100107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983638,0.000066708046,0.00002445095,0.00023313239,0.0007874784,0.00024842293,0.00008602342,0.000017991577,0.00017196969],"genre_scores_gemma":[0.9993332,0.000008555109,0.000002857111,0.000036945752,0.00003991311,0.00006807166,0.00015256676,0.000009928124,0.00034798702],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99847066,0.0003761104,0.00031798217,0.00023166325,0.00011124923,0.00049234607],"domain_scores_gemma":[0.99722266,0.0020719678,0.00007656126,0.00023691659,0.00029751577,0.00009440352],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009225161,0.00009354995,0.00023724962,0.00004664749,0.00037147975,0.000008963627,0.00011232037,0.00017836831,0.0051281797],"category_scores_gemma":[0.0030652652,0.00007953165,0.000048100457,0.0002994052,0.00015140156,0.000032452554,0.00013782507,0.0004145879,0.00007846073],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020662016,0.000171904,0.7026965,0.00011674757,0.00009321325,0.00007975933,0.00027147954,0.00007644347,0.28901383,0.00012325594,0.001801327,0.005348923],"study_design_scores_gemma":[0.0087760445,0.0015381234,0.5057395,0.0006114175,0.000024523251,0.0012020064,0.0017659577,0.00092035515,0.431863,0.00003382305,0.046808604,0.0007166349],"about_ca_topic_score_codex":0.63196695,"about_ca_topic_score_gemma":0.88510466,"teacher_disagreement_score":0.25313765,"about_ca_system_score_codex":0.00022639445,"about_ca_system_score_gemma":0.00060402974,"threshold_uncertainty_score":0.99578124},"labels":[],"label_agreement":null},{"id":"W4240162952","doi":"10.14745/ccdr.44i09a01","title":"Clinical characteristics of pediatric pertussis cases, Quebec 2015–2017","year":2018,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine; Pediatrics","score_opus":0.03333985390196402,"score_gpt":0.31068985244324865,"score_spread":0.2773499985412846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240162952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99352425,0.0021650929,0.000007160283,0.0003583839,0.0024906232,0.00014236878,0.0002471076,0.0000373259,0.0010277051],"genre_scores_gemma":[0.99358046,0.00055647624,0.000024388459,0.00011592654,0.00033557208,0.000013699964,0.0005036402,0.000017780678,0.004852032],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998305,0.0002638415,0.0008591153,0.00024617388,0.00003685314,0.00028898247],"domain_scores_gemma":[0.9972419,0.00024392283,0.00048634832,0.0014973488,0.000397978,0.00013247045],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039324415,0.000169904,0.00046594007,0.000059632126,0.00033370955,0.000015435171,0.00035913548,0.00014495898,0.0010490188],"category_scores_gemma":[0.0008021858,0.00015255359,0.00014071843,0.00014367506,0.0002606156,0.000075748314,0.00023501905,0.00024655426,0.000034475957],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024217993,0.0003526352,0.77145857,0.00004980132,0.00024883635,0.0002679496,0.000017514138,1.5603598e-7,0.001141094,0.00012802712,0.22326915,0.002824088],"study_design_scores_gemma":[0.00031649118,0.00005936991,0.56089884,0.000017051274,0.00019643299,0.0002449307,0.00002749355,0.0000021914136,0.00011435192,0.0000065313748,0.43795413,0.0001622079],"about_ca_topic_score_codex":0.7424823,"about_ca_topic_score_gemma":0.7316345,"teacher_disagreement_score":0.21468498,"about_ca_system_score_codex":0.000091471724,"about_ca_system_score_gemma":0.002894937,"threshold_uncertainty_score":0.99986416},"labels":[],"label_agreement":null},{"id":"W4242513793","doi":"10.24124/2010/bpgub1451","title":"Increasing adult pertussis vaccination in the Kootenay Boundary Region in British Columbia: the role of the family nurse practitioner","year":2010,"lang":"en","type":"dissertation","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Victoria; University of Northern British Columbia","funders":"","keywords":"Incidence (geometry); Primary care; Vaccination; Population; Boundary (topology); Immunization; Primary health care; Nursing; Medicine; Geography; Family medicine; Environmental health; Immunology; Antigen","score_opus":0.004624305160947286,"score_gpt":0.22383800493888514,"score_spread":0.21921369977793786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242513793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98927605,0.0009712331,0.0000010402841,0.0005529701,0.00172893,0.0006592077,0.000020905438,0.000019273792,0.0067704124],"genre_scores_gemma":[0.99428606,0.00036967793,0.0000058416636,0.0001822768,0.0000798044,0.00013707473,0.0005596235,0.000020551137,0.0043590623],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982917,0.00075933634,0.00045260412,0.0002510659,0.00004047468,0.00020486306],"domain_scores_gemma":[0.9987098,0.00028460397,0.00037460498,0.00038392196,0.00024096752,0.0000061053365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004878462,0.00014733216,0.0002587481,0.000087235196,0.00047880856,0.00019146365,0.00034676597,0.0007057729,0.0003510768],"category_scores_gemma":[0.0003786522,0.00010571251,0.00013404575,0.00035909645,0.000055453704,0.00019252698,0.000022826509,0.0010661794,0.0000122616475],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061051873,0.0015908836,0.28285277,0.00013306935,0.00026498042,0.0000057872635,0.00793781,0.000002984211,0.55354136,0.0015101111,0.019488702,0.13206099],"study_design_scores_gemma":[0.00057633175,0.000036862377,0.96538186,0.00017855135,0.00006380766,0.00020043668,0.013339547,0.000002941526,0.0009549079,0.00065513543,0.018464532,0.0001450703],"about_ca_topic_score_codex":0.21106577,"about_ca_topic_score_gemma":0.77469105,"teacher_disagreement_score":0.6825291,"about_ca_system_score_codex":0.00005273448,"about_ca_system_score_gemma":0.00018290544,"threshold_uncertainty_score":0.7941878},"labels":[],"label_agreement":null},{"id":"W4243538010","doi":"10.1099/jmm.0.000006","title":"Genetic and antigenic characterization of Canadian invasive Neisseria meningitidis serogroup C (MenC) case isolates in the post-MenC conjugate vaccine era, 2009–2013","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto; Institut National de Santé Publique du Québec; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; Manitoba Health; BC Mental Health & Substance Use Services; Public Health Agency of Canada","funders":"European Commission; Wellcome Trust","keywords":"Neisseria meningitidis; Biology; Serotype; Gene; Conjugate vaccine; Antigen; Neisseria; Genetics; Microbiology; Bacteria; Immunization","score_opus":0.013671289485129415,"score_gpt":0.23548866515176475,"score_spread":0.22181737566663534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243538010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913171,0.00221793,0.000012963863,0.0052470034,0.00096044387,0.00016428417,0.000066577624,0.0000038839585,0.000009824398],"genre_scores_gemma":[0.99791336,0.0013461333,0.000050254104,0.00047691163,0.00011012794,0.00000340857,0.000070066555,0.000009181914,0.000020584672],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99837244,0.00046103293,0.00069816195,0.00014591764,0.000018154002,0.00030429033],"domain_scores_gemma":[0.9989374,0.00016691977,0.0003843444,0.00012799313,0.00026336013,0.00011996146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008991873,0.00015617677,0.0004284489,0.00047173497,0.000086062646,0.000017486487,0.00024521997,0.00039333565,0.0005148789],"category_scores_gemma":[0.00028842417,0.00010208167,0.000062468556,0.00028229252,0.00013424244,0.00010828515,0.000052861036,0.00043617235,0.000017310684],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013494729,0.00007992961,0.014220978,0.000013773968,0.00012019595,0.00015593774,0.0010643139,8.082064e-7,0.981849,0.000041420873,0.0014479889,0.0008707147],"study_design_scores_gemma":[0.017021336,0.008078947,0.41657805,0.00056634046,0.00048289835,0.36310872,0.00562779,0.000030321482,0.09299334,0.0003222456,0.0942765,0.000913507],"about_ca_topic_score_codex":0.032076474,"about_ca_topic_score_gemma":0.057586666,"teacher_disagreement_score":0.88885564,"about_ca_system_score_codex":0.000035284564,"about_ca_system_score_gemma":0.00046305655,"threshold_uncertainty_score":0.974369},"labels":[],"label_agreement":null},{"id":"W4244609303","doi":"10.1016/s0378-1097(01)00189-6","title":"Detection of the lst gene in different serogroups and LOS immunotypes of Neisseria meningitidis","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"Health Canada","keywords":"Neisseria meningitidis; Neisseria; Microbiology; Gene; Biology; Neisseriaceae; Biovar; Virology; Bacteria; Genetics","score_opus":0.0066990219133749055,"score_gpt":0.1994521271271878,"score_spread":0.1927531052138129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244609303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997705,0.00075623626,0.000037424525,0.00038851428,0.00088600925,0.0001677241,0.000030883275,0.000013500847,0.000014719085],"genre_scores_gemma":[0.9996858,0.00008970047,0.000009975999,0.00008311276,0.00002583115,0.00001052987,0.000032790664,0.00000909156,0.00005311596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914074,0.0001685401,0.0003091017,0.00017850437,0.000003898238,0.00019922768],"domain_scores_gemma":[0.9995457,0.00005875141,0.00016553164,0.00019920689,0.000024342484,0.0000064745477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090428184,0.00014156489,0.00028823153,0.000104822866,0.000074697986,0.0000037426555,0.00012297195,0.00018028593,0.00007871281],"category_scores_gemma":[0.00001615696,0.0000951825,0.0000751018,0.00013991958,0.00023870255,0.000038027796,0.0000853695,0.00016347191,0.0000052614414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012992937,0.000058867037,0.06383139,0.000009390589,0.00008167022,2.5783373e-7,0.00012100941,0.000003232846,0.93498194,0.000016276426,0.000065449545,0.00070059777],"study_design_scores_gemma":[0.000667544,0.000076809105,0.2701484,0.000023610903,0.00002155158,0.00014982597,0.0000339028,4.9219034e-7,0.72711676,0.000009265446,0.0016758275,0.000076019],"about_ca_topic_score_codex":0.00040437735,"about_ca_topic_score_gemma":0.00031764168,"teacher_disagreement_score":0.20786516,"about_ca_system_score_codex":0.00002076631,"about_ca_system_score_gemma":0.0000066732805,"threshold_uncertainty_score":0.38814297},"labels":[],"label_agreement":null},{"id":"W4245706550","doi":"10.1007/978-88-470-2628-5_16","title":"Cerebral Infections","year":2012,"lang":"en","type":"book-chapter","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Western Hospital; University Health Network","funders":"","keywords":"Cysticercosis; Medicine; Tuberculosis; Disease; Immunology; Abscess; Intensive care medicine; Immune status; Immune system; Infectious disease (medical specialty); Pathology; Surgery","score_opus":0.019814504486612563,"score_gpt":0.23290298126984885,"score_spread":0.21308847678323628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245706550","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006771681,0.0016969597,0.000035613106,0.0000839494,0.0040075486,0.00012858605,0.000046540972,0.00020711317,0.9931165],"genre_scores_gemma":[0.025459995,0.00019293344,0.000011136577,0.000051328938,0.0003718766,0.000008518033,0.00025210355,0.00003327273,0.97361887],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994283,0.000011709818,0.0001870641,0.00016519727,0.0000051510406,0.00020259427],"domain_scores_gemma":[0.99958366,0.000031865726,0.00007844404,0.00023886534,0.00004917668,0.0000179746],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00004527706,0.0002102798,0.00023963876,0.00012025447,0.00015613639,0.000012108442,0.00006631955,0.00066890795,0.11492348],"category_scores_gemma":[0.0000053083036,0.0001740979,0.00015565714,0.000011963626,0.00005859488,0.00006808226,0.00006498128,0.00034572167,0.0189071],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012780829,0.0000811558,0.00044280844,0.000013198888,0.00048610978,2.4735854e-7,0.000024588124,9.641225e-8,0.013300312,0.8457122,0.12428689,0.015639614],"study_design_scores_gemma":[0.00020592859,0.0000618787,0.0002879651,0.000014010096,0.00009136202,0.00010232098,0.000001625839,1.38818494e-8,0.0008607612,0.0019028774,0.9962599,0.00021134118],"about_ca_topic_score_codex":0.000087553046,"about_ca_topic_score_gemma":0.00009967426,"teacher_disagreement_score":0.87197304,"about_ca_system_score_codex":0.000026134885,"about_ca_system_score_gemma":0.000025529982,"threshold_uncertainty_score":0.9818568},"labels":[],"label_agreement":null},{"id":"W4246283108","doi":"10.1086/344736","title":"Reply","year":2002,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Medicine","score_opus":0.011884753730440355,"score_gpt":0.22853883503269823,"score_spread":0.21665408130225788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246283108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903076,0.005798245,0.000046266337,0.0006078328,0.0015042573,0.000047084544,0.00000630642,0.000031994052,0.0016503695],"genre_scores_gemma":[0.9981177,0.0006980361,0.0000012880105,0.00027969823,0.00019492183,0.0000010772472,8.835109e-7,0.000006614479,0.0006998167],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994465,0.00015655012,0.00022933555,0.00004034696,0.000012843979,0.000114393544],"domain_scores_gemma":[0.9993706,0.00014704879,0.00020508753,0.000140086,0.00011785407,0.000019372745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013121947,0.00007363175,0.00013915169,0.00007032577,0.00019292573,0.000014462256,0.000112381305,0.000035888756,0.0029501691],"category_scores_gemma":[0.0001421758,0.000041176223,0.000111747664,0.000102177844,0.00006631068,0.0001041057,0.000021226142,0.00014900306,0.00028788243],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046116093,0.001803264,0.13350971,0.000030209578,0.0013214705,0.000012338943,0.0012764767,0.00013284752,0.2325456,0.00093075784,0.5942099,0.03376627],"study_design_scores_gemma":[0.0055798357,0.0024465302,0.16216065,0.000107145184,0.0011897542,0.0092125535,0.00046489722,0.000009364686,0.018002218,0.0023565853,0.7980214,0.0004490665],"about_ca_topic_score_codex":0.00003447791,"about_ca_topic_score_gemma":0.000003501564,"teacher_disagreement_score":0.21454339,"about_ca_system_score_codex":0.000017897284,"about_ca_system_score_gemma":0.000011435357,"threshold_uncertainty_score":0.9979613},"labels":[],"label_agreement":null},{"id":"W4247326586","doi":"10.1093/pch/12.4.317","title":"Questions and answers on immunization","year":2007,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Immunization; Medicine; Immunology; Antibody","score_opus":0.009202668786370521,"score_gpt":0.26553423181636016,"score_spread":0.2563315630299896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247326586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9778018,0.0087059,0.0018225145,0.00497079,0.0025423705,0.00033903637,0.000038453592,0.00017840772,0.003600717],"genre_scores_gemma":[0.9957137,0.0029637625,0.000103254235,0.00073501293,0.00020027328,0.000002807332,0.000111912115,0.000010751182,0.00015851486],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9992999,0.000071623086,0.00021715237,0.00015074636,0.0000110419505,0.00024957466],"domain_scores_gemma":[0.9995902,0.000104619125,0.00009073836,0.00013637956,0.00004061316,0.000037434264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045478085,0.000090468144,0.00012755556,0.00018177499,0.00048205565,0.00001137367,0.000045301174,0.00012026734,0.00006795032],"category_scores_gemma":[0.0000666674,0.0000821558,0.000025766265,0.0002415794,0.000029802775,0.00004790756,0.000021680919,0.00022587743,0.00009227764],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005686627,0.0016997566,0.3704308,0.00022985635,0.0002500065,0.0000029911334,0.0042191916,0.00005477808,0.017267447,0.17419781,0.04454416,0.38653454],"study_design_scores_gemma":[0.0011990985,0.0005682021,0.7611927,0.0000305841,0.000021894157,0.00006135216,0.00015746547,0.0000021522878,0.000701297,0.00029579946,0.2355566,0.0002128581],"about_ca_topic_score_codex":0.00038751465,"about_ca_topic_score_gemma":0.00013444893,"teacher_disagreement_score":0.39076188,"about_ca_system_score_codex":0.000043485048,"about_ca_system_score_gemma":0.000042936066,"threshold_uncertainty_score":0.3707631},"labels":[],"label_agreement":null},{"id":"W4247784427","doi":"10.2165/00128413-200414660-00007","title":"Additional pertussis booster warranted among Canadian teens","year":2004,"lang":"en","type":"article","venue":"Inpharma Weekly","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Booster (rocketry); Family medicine; Pediatrics","score_opus":0.01120816360198514,"score_gpt":0.22021411404630223,"score_spread":0.20900595044431708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247784427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97526914,0.00016234198,0.000018876546,0.0034021304,0.0021870893,0.00020611196,0.008944799,0.00015346947,0.009656066],"genre_scores_gemma":[0.99151987,0.000009722627,0.000030938216,0.0006593492,0.00017588594,0.000058983154,0.0031094612,0.000017338709,0.004418433],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992233,0.00004192858,0.00017601252,0.00019773138,0.000012342477,0.0003486659],"domain_scores_gemma":[0.99962485,0.000048588503,0.00004323091,0.00014182887,0.00007250118,0.00006901574],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00004485513,0.00014058361,0.0001434975,0.00016506405,0.0003060136,0.000026420103,0.00011151248,0.00017664804,0.17064457],"category_scores_gemma":[0.000039783976,0.00012447232,0.00008426262,0.00012764586,0.00009318682,0.00015690694,0.000022682683,0.00020884251,0.0033981295],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052603285,0.00011995094,0.0028929089,0.000007542173,0.00021381382,0.000017724751,0.00024663672,0.000008289816,0.15827397,0.00028002716,0.8349558,0.0029307117],"study_design_scores_gemma":[0.0012437205,0.00006463623,0.08195864,0.00003322938,0.000024745712,0.00015554696,0.00006858812,0.0000010521103,0.010129488,0.000097222786,0.90601104,0.0002120788],"about_ca_topic_score_codex":0.047355864,"about_ca_topic_score_gemma":0.056076437,"teacher_disagreement_score":0.16724643,"about_ca_system_score_codex":0.000098566336,"about_ca_system_score_gemma":0.0001637473,"threshold_uncertainty_score":0.9973778},"labels":[],"label_agreement":null},{"id":"W4248158533","doi":"10.1016/b978-0-444-64150-2.00029-0","title":"Maternal infections","year":2020,"lang":"en","type":"book-chapter","venue":"Handbook of clinical neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"Neurocognitive; Medicine; Pregnancy; Fetus; Pediatrics; Pathophysiology; Intensive care medicine; Pathology; Psychiatry; Cognition; Biology","score_opus":0.05548642219002968,"score_gpt":0.32068991545293474,"score_spread":0.26520349326290504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248158533","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06875069,0.006373245,0.00045128068,0.004159955,0.03395629,0.0011640268,0.00061024365,0.00058795844,0.8839463],"genre_scores_gemma":[0.26170155,0.011897654,0.00013762583,0.0054543163,0.0038994814,0.00005188391,0.0005374845,0.00032813847,0.71599185],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977793,0.00015971012,0.0013301811,0.00049564725,0.000019270366,0.00021588606],"domain_scores_gemma":[0.9981928,0.00060508563,0.0006587562,0.00037233514,0.00011770126,0.000053339718],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018645354,0.00030568056,0.0011809677,0.0001168372,0.00008326489,0.0000071300274,0.00022866743,0.0015137327,0.008059364],"category_scores_gemma":[0.00019227812,0.00027418014,0.0005596814,0.000020155123,0.00046987808,0.00003381979,0.00019727986,0.0013223852,0.0028232168],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009588773,0.0016162507,0.06349148,0.00052236137,0.00733969,0.00019708816,0.00009454976,0.000012881593,0.10620907,0.4111251,0.29680327,0.10299949],"study_design_scores_gemma":[0.0012869634,0.0024895552,0.0032187689,0.00007054398,0.0002019199,0.0001768897,1.9239477e-7,7.471746e-7,0.0014377176,0.0048707663,0.98602444,0.00022151877],"about_ca_topic_score_codex":0.00003918629,"about_ca_topic_score_gemma":0.000044725162,"teacher_disagreement_score":0.68922114,"about_ca_system_score_codex":0.0000032548962,"about_ca_system_score_gemma":0.00009783628,"threshold_uncertainty_score":0.99997103},"labels":[],"label_agreement":null},{"id":"W4248177319","doi":"10.1016/s1473-3099(10)70300-5","title":"A vaccine against meningitis in Africa","year":2010,"lang":"en","type":"editorial","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningitis; Neisseria meningitidis; Incidence (geometry); Vaccination; Medicine; Population; Transmission (telecommunications); Epidemiology; Quarter (Canadian coin); Meningococcal disease; Demography; Environmental health; Geography; Pediatrics; Virology; Biology","score_opus":0.010297927433177456,"score_gpt":0.2492081557058405,"score_spread":0.23891022827266306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248177319","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08975983,0.0044268044,0.000002915493,0.00025761308,0.8976145,0.00044412856,0.0011970953,0.0004944914,0.00580266],"genre_scores_gemma":[0.2574655,0.0024935943,0.0000026897621,0.00008165411,0.73522204,0.00038917662,0.00202337,0.00009499276,0.002226953],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982092,0.00028914516,0.00039382317,0.00042681847,0.000043980428,0.00063704187],"domain_scores_gemma":[0.9979306,0.00091597997,0.0002484309,0.00072803523,0.00014289911,0.00003404777],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002748782,0.0004099533,0.0008507838,0.00020897924,0.0003244927,0.00009594059,0.0004600754,0.0010305623,0.0008119497],"category_scores_gemma":[0.0009315007,0.00028542636,0.0002005479,0.0002965731,0.000092115006,0.000093823626,0.00018827959,0.0018153435,0.00050417235],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015927362,0.00022181711,0.0024935782,0.00004832908,0.00019564276,0.0000053346207,0.00010452049,0.0000047140506,0.0051697134,0.00006684036,0.98942655,0.002103697],"study_design_scores_gemma":[0.002265571,0.00012180684,0.0026092946,0.000099075216,0.00015806843,0.0000114599625,0.000013894856,6.16037e-7,0.00015981535,0.00043079339,0.993783,0.00034662883],"about_ca_topic_score_codex":0.00052005023,"about_ca_topic_score_gemma":0.0013938679,"teacher_disagreement_score":0.16770568,"about_ca_system_score_codex":0.00008252165,"about_ca_system_score_gemma":0.0001908822,"threshold_uncertainty_score":0.99995977},"labels":[],"label_agreement":null},{"id":"W4249171049","doi":"10.1093/pch/13.4.309","title":"Therapy of suspected bacterial meningitis in Canadian children six weeks of age and older – summary","year":2008,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bacterial meningitis; Medicine; Meningitis; Pediatrics","score_opus":0.009507354344879895,"score_gpt":0.23272402507494722,"score_spread":0.22321667073006732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249171049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99050754,0.0075772423,0.0000010510391,0.0004976509,0.0005464868,0.00032977154,0.00021327526,0.00001731834,0.00030963842],"genre_scores_gemma":[0.9839175,0.015445434,0.000031573978,0.000073484116,0.00014601841,0.00000559442,0.00032951508,0.0000146747725,0.000036219888],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987893,0.00015882954,0.00043979718,0.00020183682,0.000018459747,0.00039177088],"domain_scores_gemma":[0.99945486,0.000067303576,0.00019052438,0.00016398587,0.0000477489,0.00007557083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022825923,0.00013805064,0.00040628042,0.0003883404,0.0001781108,0.0000040786877,0.00009277445,0.00019265032,0.00022497405],"category_scores_gemma":[0.000034993544,0.00013013821,0.0000523126,0.00032948627,0.00008744688,0.000054228207,0.000028202612,0.00022286596,0.00000403289],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001166785,0.00020425685,0.9814594,0.000029325844,0.0000751511,0.000004014461,0.0013361679,8.719989e-7,0.009414902,0.00031754377,0.0031098626,0.003931876],"study_design_scores_gemma":[0.0020323414,0.000264588,0.9905362,0.000021672258,0.00000516272,0.00007289944,0.000015524063,2.011758e-7,0.0010964705,0.000015723694,0.0058292025,0.00010997219],"about_ca_topic_score_codex":0.37624687,"about_ca_topic_score_gemma":0.14634486,"teacher_disagreement_score":0.229902,"about_ca_system_score_codex":0.000055125078,"about_ca_system_score_gemma":0.00037781935,"threshold_uncertainty_score":0.8692321},"labels":[],"label_agreement":null},{"id":"W4249787195","doi":"10.1007/s12028-012-9784-z","title":"Systematic Review of Efficacy, Pharmacokinetics, and Administration of Intraventricular Vancomycin in Adults","year":2012,"lang":"en","type":"article","venue":"Neurocritical Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; Burnaby Hospital; University of British Columbia","funders":"","keywords":"Vancomycin; Medicine; Ventriculitis; Meningitis; Intensive care medicine; Dosing; Dose; Antibiotics; Adverse effect; Intraventricular hemorrhage; Anesthesia; Internal medicine; Surgery; Staphylococcus aureus; Gestational age","score_opus":0.007465652386494112,"score_gpt":0.2713514166220751,"score_spread":0.263885764235581,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249787195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.929193,0.06982344,0.000009017543,0.00008367623,0.000330846,0.00041064914,0.000023740558,0.000008278717,0.00011732996],"genre_scores_gemma":[0.9978217,0.00204416,0.0000106826565,0.000059081984,0.000018109744,0.000012376926,0.000025313238,0.0000044152193,0.0000041819562],"study_design_codex":"systematic_review","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992612,0.00015840902,0.0003642765,0.000080153055,0.000014316831,0.00012163993],"domain_scores_gemma":[0.99959934,0.00012870264,0.000054960576,0.00009645222,0.00010211796,0.0000184527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008179777,0.0000701585,0.0003137429,0.000041258245,0.000013072286,0.0000015393119,0.000039890856,0.000055580294,0.00008138633],"category_scores_gemma":[0.00037206503,0.000057617475,0.000041100826,0.00008383715,0.000041296345,0.00003794833,0.000021674106,0.00008755884,0.000004949362],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021949365,0.00067754625,0.0058554136,0.8295988,0.00006235533,0.000005241145,0.00042592257,1.7662305e-7,0.15940745,0.0028080945,0.00023452603,0.00070498075],"study_design_scores_gemma":[0.005963429,0.001823771,0.109498486,0.24670243,0.0013100692,0.00067930046,0.0009529063,0.0000043997707,0.6312646,0.00003076766,0.0012152952,0.00055450166],"about_ca_topic_score_codex":0.000010208417,"about_ca_topic_score_gemma":0.000002820939,"teacher_disagreement_score":0.58289635,"about_ca_system_score_codex":0.0000059136423,"about_ca_system_score_gemma":0.000009538368,"threshold_uncertainty_score":0.23495725},"labels":[],"label_agreement":null},{"id":"W4250229633","doi":"10.1016/j.vaccine.2018.03.029","title":"Humoral immunity 10 years after booster immunization with an adolescent and adult formulation combined tetanus, diphtheria, and 5-component acellular pertussis vaccine in the USA","year":2018,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur","keywords":"Diphtheria; Medicine; Vaccination; Tetanus; Reactogenicity; Booster dose; Immunization; Immunogenicity; Immunology; Immunity; Pediatrics; Antibody; Immune system","score_opus":0.009943498883697876,"score_gpt":0.22540039823624142,"score_spread":0.21545689935254353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250229633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986237,0.00040371876,0.00003282553,0.0003852184,0.0001301999,0.0003691307,0.000010849784,0.000020114347,0.00002422384],"genre_scores_gemma":[0.9991099,0.000102831866,0.00007023972,0.00015532401,0.00006755438,0.000020419744,0.0002755551,0.000017317121,0.00018084211],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990732,0.0002270168,0.00024638168,0.0002203058,0.00002208127,0.00021098748],"domain_scores_gemma":[0.999417,0.000030467096,0.00008802616,0.00033285568,0.00011029998,0.000021361539],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020697729,0.00018029739,0.00021972292,0.000110874826,0.00019961745,0.00005335979,0.00010643763,0.00012679603,0.0009183826],"category_scores_gemma":[0.00001601802,0.00011621122,0.000021278516,0.00016914494,0.00002456282,0.00024558196,0.000075623975,0.00017036335,0.000025570318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006713267,0.0007537026,0.6085706,0.000043836342,0.0001267446,0.0000050417284,0.0033616244,0.0000019210856,0.3716774,0.00024501662,0.00034332433,0.0081575755],"study_design_scores_gemma":[0.0037279308,0.0011940086,0.984581,0.00004618317,0.000052321007,0.00007178346,0.00024833024,0.000051218027,0.004912017,0.000035443543,0.0049051717,0.00017460795],"about_ca_topic_score_codex":0.0007287798,"about_ca_topic_score_gemma":0.0017051516,"teacher_disagreement_score":0.37601045,"about_ca_system_score_codex":0.00002016567,"about_ca_system_score_gemma":0.000010225076,"threshold_uncertainty_score":0.99999493},"labels":[],"label_agreement":null},{"id":"W4252937727","doi":"10.1139/w01-087","title":"Acid stress upregulated outer membrane proteins in clinical isolates of<i>Neisseria gonorrhoeae</i>, but not most commensal<i>Neisseria</i>","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health","keywords":"Bacterial outer membrane; Neisseria gonorrhoeae; Neisseria; Microbiology; Biology; Neisseriaceae; Immune system; Bacteria; Escherichia coli; Biochemistry; Antibiotics; Immunology","score_opus":0.01706904733038194,"score_gpt":0.24909942559205217,"score_spread":0.23203037826167022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252937727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932129,0.0019147375,0.000019469402,0.0010268221,0.003123226,0.0002838947,0.00028306243,0.000013030178,0.00012287838],"genre_scores_gemma":[0.99849635,0.00030397132,0.0001013258,0.00037754292,0.00016527883,0.00000577208,0.00014277488,0.00003067851,0.00037627792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99690676,0.000580951,0.0015532444,0.0002907169,0.0000048642437,0.00066347484],"domain_scores_gemma":[0.9983127,0.0001494452,0.0006868617,0.0003431499,0.00033417201,0.00017368479],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006591213,0.0003029475,0.00095943594,0.0005331399,0.00014109067,0.00002560264,0.0004836465,0.000737433,0.0013670133],"category_scores_gemma":[0.00017026874,0.0002634553,0.00024171882,0.00036606318,0.00038478858,0.00015615874,0.00004591607,0.0007570461,0.00007909654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005140248,0.00013261283,0.05042722,0.000018316925,0.00026096837,0.000021282924,0.00014659707,0.000010065071,0.94541717,0.00004501808,0.001510929,0.001495799],"study_design_scores_gemma":[0.006274953,0.0016665449,0.045789875,0.00032012357,0.00015057871,0.007388334,0.00030771224,0.000003087022,0.74930626,0.00005101842,0.18814006,0.0006014574],"about_ca_topic_score_codex":0.0083699245,"about_ca_topic_score_gemma":0.043964528,"teacher_disagreement_score":0.19611092,"about_ca_system_score_codex":0.00008850437,"about_ca_system_score_gemma":0.00071320665,"threshold_uncertainty_score":0.99998176},"labels":[],"label_agreement":null},{"id":"W4253932088","doi":"10.1101/633164","title":"A competence-regulated toxin-antitoxin system in <i>Haemophilus influenzae</i>","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; National Institutes of Health; University of British Columbia","keywords":"Operon; Antitoxin; Biology; Gene; Transcription (linguistics); Genetics; Mutant; Toxin; Microbiology; Plasmid","score_opus":0.012291982286375994,"score_gpt":0.21445267664555775,"score_spread":0.20216069435918177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253932088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98682976,0.0026201492,0.00008088071,0.000087804416,0.008311251,0.0010716134,0.00032816167,0.00062722,0.000043169588],"genre_scores_gemma":[0.99898255,0.00012999708,0.0001916647,0.00009574744,0.00028585357,0.00016770017,0.0000028838772,0.00011602127,0.000027597534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967177,0.00036925904,0.00095162995,0.0011140287,0.000059452974,0.00078793254],"domain_scores_gemma":[0.997403,0.00009897035,0.0005236454,0.0015337893,0.00036497272,0.00007560069],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054343813,0.00072269357,0.001152138,0.0005495825,0.00017919255,0.00014688264,0.0006778796,0.001558594,0.00016516088],"category_scores_gemma":[0.00009034513,0.00073452515,0.00023526473,0.00063032645,0.00013950332,0.00017281031,0.00066057744,0.001296249,0.0012731012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100171725,0.00017534646,0.019204998,0.0005423026,0.00027342144,0.000020249963,0.000010387978,0.00017387627,0.97790354,0.0010210056,0.000572815,0.0000018636212],"study_design_scores_gemma":[0.003482488,0.00017289628,0.27896646,0.002287004,0.00022240594,6.6728114e-7,0.00001531269,0.00014744038,0.6622318,0.0000017919052,0.050669543,0.0018021658],"about_ca_topic_score_codex":0.0006190741,"about_ca_topic_score_gemma":0.000018547671,"teacher_disagreement_score":0.31567174,"about_ca_system_score_codex":0.0004118684,"about_ca_system_score_gemma":0.0005043349,"threshold_uncertainty_score":0.9997376},"labels":[],"label_agreement":null},{"id":"W4254541937","doi":"10.1139/w99-144","title":"Comparative evaluation of conjugate vaccines in the<i>Haemophilus influenzae</i>infection model","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Conjugate vaccine; Vaccination; Antibody; Conjugate; Virology; Pasteurellaceae; Immunization; Immunology; Medicine; Microbiology; Biology; Antibiotics","score_opus":0.042252274365106444,"score_gpt":0.2865216787037117,"score_spread":0.24426940433860525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254541937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962619,0.0017665554,0.000011112771,0.000302979,0.0005701206,0.00019203174,0.00004842274,0.0000027588524,0.00084412337],"genre_scores_gemma":[0.9995638,0.0000763976,0.000016658789,0.00016505421,0.00005169712,0.0000052054315,0.00003390981,0.000005496674,0.000081754275],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985332,0.0005761289,0.00053396507,0.0001092673,0.000012009598,0.00023545315],"domain_scores_gemma":[0.9991025,0.00007594295,0.00025196723,0.00014013718,0.00039753705,0.000031915046],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009977624,0.00012611016,0.00036461183,0.0003044751,0.00011082591,0.000010293988,0.000179282,0.00020048609,0.0015057444],"category_scores_gemma":[0.000049486756,0.00009169574,0.0000971544,0.0001994447,0.00013744264,0.00011121546,0.0000048492325,0.00022626348,0.00005431991],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002720088,0.0001137726,0.0124476105,0.0000116026895,0.00024978264,0.000004112202,0.0034744467,0.013673112,0.9538784,0.0003940501,0.00899271,0.006488413],"study_design_scores_gemma":[0.029174292,0.004160077,0.30154252,0.0005473909,0.0016905122,0.017905943,0.0019447358,0.0013768168,0.25206953,0.008963826,0.3789322,0.001692122],"about_ca_topic_score_codex":0.0057782712,"about_ca_topic_score_gemma":0.043858122,"teacher_disagreement_score":0.7018088,"about_ca_system_score_codex":0.00008496462,"about_ca_system_score_gemma":0.0006495891,"threshold_uncertainty_score":0.999407},"labels":[],"label_agreement":null},{"id":"W4254815269","doi":"10.14740/jnr620","title":"Brain Abscess in a Patient With Radiotherapy-Treated Adenoid Cystic Carcinoma: A Misdiagnosis Case Report and Review of the Literature","year":2020,"lang":"en","type":"article","venue":"Journal of Neurology Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Brain abscess; Craniotomy; Adenoid cystic carcinoma; Headaches; Surgery; Lesion; Abscess; Radiology; Carcinoma; Internal medicine","score_opus":0.027338491604651023,"score_gpt":0.3104276609834598,"score_spread":0.2830891693788088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254815269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.927938,0.04644284,9.399959e-7,0.025245208,0.000105075735,0.00024416376,0.000008576561,0.0000023961443,0.000012841274],"genre_scores_gemma":[0.9959187,0.0029722673,0.0000066445664,0.0010199952,0.00004196286,0.00000906313,0.0000020208306,0.000008956413,0.000020391126],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99795294,0.0012132045,0.00044128805,0.00016034151,0.00004245119,0.00018980635],"domain_scores_gemma":[0.9987547,0.00047088633,0.00026172225,0.00016329436,0.00031385393,0.00003555573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064263836,0.0000927221,0.0003543261,0.0001503448,0.000083689425,0.000011123258,0.00013254261,0.00013317198,0.0000742751],"category_scores_gemma":[0.000626803,0.000051084462,0.000061222076,0.00055959687,0.00017479612,0.000056981735,0.0000627016,0.00094598136,8.2109307e-7],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009857006,0.0008998613,0.34360746,0.0032624484,0.0005680008,0.19677864,0.0064875106,0.000014869062,0.40229598,0.00003846858,0.032121927,0.00406783],"study_design_scores_gemma":[0.0031923284,0.0070135817,0.14782193,0.001707009,0.00007133562,0.8151129,0.00009145073,0.0000040928126,0.005852151,0.000017944618,0.018984059,0.0001312043],"about_ca_topic_score_codex":0.000120236604,"about_ca_topic_score_gemma":0.000048728492,"teacher_disagreement_score":0.6183343,"about_ca_system_score_codex":0.000012516603,"about_ca_system_score_gemma":0.000106082975,"threshold_uncertainty_score":0.41098708},"labels":[],"label_agreement":null},{"id":"W4255232118","doi":"10.1017/cjn.2016.144","title":"P.040 Redefining true leukocytosis in the traumatic lumbar puncture","year":2016,"lang":"en","type":"article","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Saskatoon Medical Imaging","funders":"","keywords":"Leukocytosis; Medicine; Lumbar puncture; Cerebrospinal fluid; CSF albumin; Meningitis; Gastroenterology; Cohort; Internal medicine; Retrospective cohort study; Surgery","score_opus":0.04038399871664797,"score_gpt":0.25735668772233206,"score_spread":0.2169726890056841,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255232118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851421,0.0012930714,0.000016403588,0.010169148,0.0015330283,0.00011992528,0.000009478372,0.000011910279,0.0017049279],"genre_scores_gemma":[0.99743783,0.0003839247,0.00013686105,0.001824595,0.00016155659,0.000004071913,2.1063593e-7,0.000006981604,0.000043972213],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9958445,0.0016731446,0.0008249335,0.00037695965,0.00014167746,0.0011388074],"domain_scores_gemma":[0.99790746,0.00087315025,0.0005552723,0.00015907094,0.00018829244,0.0003167304],"candidate_categories":["sts"],"consensus_categories":["sts"],"category_scores_codex":[0.004731314,0.00027514153,0.00044446829,0.0007658193,0.002325034,0.0003908914,0.0019604447,0.000255561,0.00060927094],"category_scores_gemma":[0.0021131698,0.00012023109,0.00021575385,0.0010829739,0.004188893,0.00075856975,0.000042016774,0.0009853566,0.000015223592],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011972028,0.00007609737,0.95561457,0.0000069818057,0.000037200836,0.0014170957,0.0017110895,0.0002832751,0.006493026,0.0037856319,0.004148379,0.026306957],"study_design_scores_gemma":[0.0012159602,0.050726373,0.8301641,0.00013827442,0.000066539906,0.06672261,0.0011286035,0.000024184874,0.00074212113,0.021055672,0.02749191,0.00052365195],"about_ca_topic_score_codex":0.0016776655,"about_ca_topic_score_gemma":0.10012266,"teacher_disagreement_score":0.12545045,"about_ca_system_score_codex":0.00014444243,"about_ca_system_score_gemma":0.001365331,"threshold_uncertainty_score":0.9989738},"labels":[],"label_agreement":null},{"id":"W4255251754","doi":"10.1128/aac.02458-13","title":"Molecular Analysis of Antimicrobial Resistance Mechanisms in Neisseria gonorrhoeae Isolates from Ontario, Canada","year":2013,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Neisseria gonorrhoeae; Microbiology; Antimicrobial; Biology; Neisseriaceae; Antibiotic resistance; Drug resistance; Antibiotics","score_opus":0.005053400040707011,"score_gpt":0.1976443649006711,"score_spread":0.1925909648599641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255251754","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982657,0.00006553944,0.000076876335,0.0007410728,0.00038586493,0.00021181311,0.00010482753,0.000014657813,0.00013363674],"genre_scores_gemma":[0.99728924,0.00013904594,0.00016527517,0.0014737675,0.000011241467,0.0000072110147,0.00023158944,0.000018048899,0.0006645923],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99891114,0.000054995377,0.00039400518,0.00034162114,0.000008020644,0.0002901902],"domain_scores_gemma":[0.9994918,0.00002705982,0.00015686205,0.00023337587,0.00006461953,0.00002626276],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00004947708,0.00022163894,0.0005151155,0.00015816205,0.00008543563,0.000036626603,0.00015482008,0.00017702626,0.0037645956],"category_scores_gemma":[0.000003928231,0.00020612634,0.000110432935,0.0003387438,0.000052593146,0.00010490737,0.00004078323,0.00014177685,0.000010002305],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010388206,0.00011733251,0.031167243,0.0000090787335,0.000915118,5.094866e-7,0.0002707148,0.000016118925,0.9561524,0.000069236085,0.010821305,0.0003570735],"study_design_scores_gemma":[0.0023856056,0.000045903285,0.56030685,0.000066666944,0.00030856946,0.0000039715096,0.000072788476,0.000019585732,0.40770042,0.00013696605,0.028500522,0.00045216904],"about_ca_topic_score_codex":0.9421976,"about_ca_topic_score_gemma":0.9395458,"teacher_disagreement_score":0.54845196,"about_ca_system_score_codex":0.00007087226,"about_ca_system_score_gemma":0.00012168927,"threshold_uncertainty_score":0.99714607},"labels":[],"label_agreement":null},{"id":"W4255600014","doi":"10.1385/1-59259-321-6:243","title":"ELISA","year":2003,"lang":"it","type":"review","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Chemistry","score_opus":0.11368260005571847,"score_gpt":0.32476880916768686,"score_spread":0.2110862091119684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255600014","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006920835,0.82275635,0.000011027891,0.0000030214626,0.0056088786,0.0008948967,0.00013169862,0.00010409511,0.17042084],"genre_scores_gemma":[0.00006689633,0.81374705,0.000013080945,0.000061195,0.00046072507,0.00022134514,0.00022523264,0.00008925405,0.18511519],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964446,0.00090700475,0.0010362837,0.00081399677,0.000028137625,0.0007700093],"domain_scores_gemma":[0.9980168,0.00013541071,0.00058426947,0.0010652597,0.00013198424,0.00006628899],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00030208015,0.0008587437,0.0019190558,0.00020077085,0.0006180094,0.00013618988,0.00053116743,0.0014923634,0.005642877],"category_scores_gemma":[0.000029834857,0.0007387629,0.00077335734,0.000033145407,0.0002465711,0.000060400835,0.00024373138,0.0010546265,0.0018060333],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030361605,0.00018540536,9.723574e-7,0.0046987594,0.0019190962,0.000009443019,0.00020087615,1.5724909e-7,0.00038605664,0.041656833,0.03862156,0.91229045],"study_design_scores_gemma":[0.0006340517,0.00011500835,0.000005936887,0.001974718,0.0014766125,0.00021237852,0.0000087191365,6.939249e-8,0.0002535119,0.00006462056,0.9945245,0.0007299105],"about_ca_topic_score_codex":0.0004588742,"about_ca_topic_score_gemma":0.00004724759,"teacher_disagreement_score":0.9559029,"about_ca_system_score_codex":0.000080800244,"about_ca_system_score_gemma":0.00015079351,"threshold_uncertainty_score":0.9998039},"labels":[],"label_agreement":null},{"id":"W4255733503","doi":"10.2165/00128413-200414370-00056","title":"Health Canada has approved a new two-dose regimen of Meningococcal group C conjugate vaccine [NeisVac-C; Shire Biologics]","year":2004,"lang":"en","type":"article","venue":"Inpharma Weekly","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Regimen; Shire; Pharmacy; Meningococcal vaccine; Pharmacology; Family medicine; Internal medicine; Virology; Immunology; Immunization","score_opus":0.024698739203132227,"score_gpt":0.26563162755062075,"score_spread":0.24093288834748852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255733503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98005635,0.0020294837,0.00020395096,0.014869839,0.0018095828,0.0005237851,0.00010729458,0.00012326111,0.00027646223],"genre_scores_gemma":[0.9975919,0.000103388506,0.00021781116,0.0008706976,0.00018534945,0.000025484156,0.00021526273,0.000025309724,0.0007647626],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982926,0.00016645348,0.0006004965,0.00038269823,0.000026985077,0.0005307278],"domain_scores_gemma":[0.9990665,0.00006999243,0.000345535,0.00032955938,0.000084165586,0.000104269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024467052,0.0002840406,0.0005973268,0.00010014229,0.00027567847,0.000023035323,0.00027334015,0.00016488932,0.00039626218],"category_scores_gemma":[0.000044506665,0.00023956152,0.000099523066,0.00024401714,0.00007888458,0.000116946525,0.000115660536,0.00033290542,0.00005607857],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066079275,0.00026289208,0.0017550213,0.000043132583,0.00031813796,0.0000064882915,0.00031978264,0.000054477066,0.9084707,0.0015571405,0.078968756,0.007582674],"study_design_scores_gemma":[0.026395982,0.0021596146,0.024280077,0.00017971416,0.00012846693,0.00044342477,0.000399911,0.000010133612,0.2142066,0.0010562486,0.7298416,0.00089824287],"about_ca_topic_score_codex":0.66422355,"about_ca_topic_score_gemma":0.2907636,"teacher_disagreement_score":0.6942641,"about_ca_system_score_codex":0.00019783518,"about_ca_system_score_gemma":0.0011617973,"threshold_uncertainty_score":0.9769035},"labels":[],"label_agreement":null},{"id":"W4256694497","doi":"10.3410/f.1083831.537736","title":"Faculty Opinions recommendation of Release of outer membrane vesicles by Gram-negative bacteria is a novel envelope stress response.","year":2007,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Envelope (radar); Vesicle; Gram; Bacteria; Gram-negative bacteria; Bacterial outer membrane; Fight-or-flight response; Cell envelope; Membrane; Biophysics; Chemistry; Microbiology; Biology; Computer science; Biochemistry; Telecommunications; Genetics; Escherichia coli","score_opus":0.02782406412174779,"score_gpt":0.33296319032042293,"score_spread":0.3051391261986751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256694497","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001002926,0.0008395826,0.000033833432,0.06993838,0.0015600256,0.0010882108,0.92639714,0.00002962928,0.000012902223],"genre_scores_gemma":[0.00009828025,0.00047161363,0.0003601029,0.0014830318,0.0001387198,0.00011915385,0.99586314,0.000028829494,0.0014371275],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99587744,0.0007941162,0.0020242464,0.00065241015,0.00026266064,0.0003891193],"domain_scores_gemma":[0.9912678,0.00042977132,0.0022216528,0.0012489957,0.0047098934,0.000121886966],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015312369,0.00057533325,0.0012284248,0.00046311188,0.00023979884,0.00006164816,0.0011631527,0.0012193723,0.0018230618],"category_scores_gemma":[0.005059323,0.00038420316,0.00059326674,0.0014964956,0.0005363122,0.00031464748,0.00041963978,0.0009798873,0.000058107944],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030804367,0.0007569525,0.0000064297215,0.0030942317,0.00044029098,7.6375215e-8,0.00022213857,1.7878738e-8,0.005284879,0.000054223587,0.98846203,0.0013706957],"study_design_scores_gemma":[0.0014353162,0.00025313318,0.00248748,0.006326967,0.00023631043,0.000038880917,0.000052148487,3.0172086e-7,0.010130912,0.000005750725,0.97868896,0.00034382346],"about_ca_topic_score_codex":0.00028225707,"about_ca_topic_score_gemma":0.0000125315855,"teacher_disagreement_score":0.069465995,"about_ca_system_score_codex":0.00008390608,"about_ca_system_score_gemma":0.00040548926,"threshold_uncertainty_score":0.999861},"labels":[],"label_agreement":null},{"id":"W4280509771","doi":"10.1016/j.vaccine.2022.04.101","title":"A comparison of national vaccination policies to prevent serogroup B meningococcal disease","year":2022,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Vaccination; Meningococcal vaccine; Immunization; Medicine; Environmental health; Meningococcal disease; Timeline; Disease; Family medicine; Neisseria meningitidis; Immunology; Geography","score_opus":0.06786615878180907,"score_gpt":0.3885738379274082,"score_spread":0.3207076791455991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280509771","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017365533,0.9953504,0.00001964069,0.00011450785,0.0011121016,0.0009797061,0.00038479082,0.000072545896,0.00022972743],"genre_scores_gemma":[0.0045828274,0.99052536,0.00003123749,0.000031092783,0.00022221298,0.00040708325,0.0024142063,0.000052550455,0.0017334394],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982495,0.00029961058,0.0008096193,0.00034588343,0.000048304646,0.0002471207],"domain_scores_gemma":[0.9989127,0.00020482593,0.0004492413,0.00027575236,0.00010766197,0.00004983236],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025103122,0.000321653,0.0012463785,0.00049656286,0.00019502964,0.000015976595,0.00029094866,0.00019008048,0.0065215975],"category_scores_gemma":[0.00015826724,0.0002723671,0.00035496918,0.0005442287,0.0000042680954,0.00006151111,0.00028274138,0.00031953375,0.00017050524],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018309908,0.0020982546,0.0005966921,0.0049498295,0.0010276742,9.001045e-7,0.00034640674,0.000028923829,0.0006020573,0.002635481,0.042841025,0.94468963],"study_design_scores_gemma":[0.00031165147,0.00022317375,0.000817207,0.0004855628,0.00035362935,0.000017187705,0.000021343269,0.0000010288907,0.00007066019,0.000026973687,0.9974295,0.00024211293],"about_ca_topic_score_codex":0.000079780024,"about_ca_topic_score_gemma":0.000021771439,"teacher_disagreement_score":0.9545885,"about_ca_system_score_codex":0.00017703869,"about_ca_system_score_gemma":0.00020599997,"threshold_uncertainty_score":0.9999729},"labels":[],"label_agreement":null},{"id":"W4280527553","doi":"10.14745/ccdr.v48i05a06","title":"Epidemiology of invasive meningococcal disease in Canada, 2012–2019","year":2022,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Incidence (geometry); Epidemiology; Medicine; Outbreak; Population; Vaccination; Meningococcal disease; Meningococcal vaccine; Neisseria meningitidis; Conjugate vaccine; Pediatrics; Demography; Virology; Immunology; Internal medicine; Biology; Immunization; Environmental health; Antibody","score_opus":0.020839373557043236,"score_gpt":0.2462607142476986,"score_spread":0.22542134069065536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280527553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841266,0.01208625,0.000001998864,0.0013142042,0.0010930363,0.0002808834,0.00071848865,0.0000139068125,0.00036461718],"genre_scores_gemma":[0.99639463,0.00009999425,0.000007553757,0.00036091305,0.000013437888,0.00014860682,0.0012001086,0.000016735412,0.0017580236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975964,0.0008766876,0.00076952326,0.0002810589,0.00004564498,0.00043068005],"domain_scores_gemma":[0.99765897,0.00057909027,0.0003772459,0.0011334004,0.00008457963,0.00016670223],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004945105,0.00017440983,0.00052792236,0.00008415675,0.00033419672,0.0000013491277,0.0004577006,0.000037705537,0.0020979792],"category_scores_gemma":[0.0007070857,0.00018229875,0.00008512448,0.00021853202,0.000083266015,0.00006216753,0.00055934436,0.0004222734,0.0000019527972],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029064665,0.00012319854,0.9400706,0.000031453787,0.000107832755,0.0003378453,0.0000140254815,0.00150912,0.0010114149,0.0004172223,0.055982064,0.000104550774],"study_design_scores_gemma":[0.00061324204,0.00002662137,0.8085538,0.000026290947,0.00006149072,0.000113169925,0.0002182759,0.000022792194,0.00012732134,0.00014192943,0.18986209,0.00023296294],"about_ca_topic_score_codex":0.9992862,"about_ca_topic_score_gemma":0.99936235,"teacher_disagreement_score":0.13388003,"about_ca_system_score_codex":0.0010732982,"about_ca_system_score_gemma":0.019859696,"threshold_uncertainty_score":0.9988142},"labels":[],"label_agreement":null},{"id":"W4280536692","doi":"10.12688/wellcomeopenres.17749.1","title":"The safety and immunogenicity of a combined pertussis containing vaccine Tdap for HIV infected pregnant women and their newborns (WoMANPOWER) – A study protocol for a randomized clinical trial","year":2022,"lang":"en","type":"preprint","venue":"Wellcome Open Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"European and Developing Countries Clinical Trials Partnership; Seqirus; National Institute for Health and Care Research; Canadian Child Health Clinician Scientist Program; Moderna; Novavax; Wellcome Trust; GlaxoSmithKline; Children's Hospital Foundation; Medical Research Council; London School of Hygiene and Tropical Medicine; Sanofi; Canadian Institutes of Health Research; Wellcome; Michael Smith Health Research BC; BC Children's Hospital; Bill and Melinda Gates Foundation; Johns Hopkins University; Department for International Development; Pfizer","keywords":"Medicine; Tetanus; Reactogenicity; Diphtheria; Pregnancy; Pediatrics; Randomized controlled trial; Obstetrics; Vaccination; Immunization; Immunology; Internal medicine; Antibody","score_opus":0.13254789269130884,"score_gpt":0.4479563780827708,"score_spread":0.31540848539146193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280536692","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45563003,0.00030151685,0.00009596667,0.00069442583,0.00057905616,0.54211473,0.00035729315,0.000033138218,0.000193845],"genre_scores_gemma":[0.22268365,0.0002526791,0.000049881088,0.000012612316,0.000095788775,0.77416,0.0001712655,0.00005742518,0.0025166615],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9880621,0.008110477,0.001986469,0.0009781189,0.00007614591,0.00078672846],"domain_scores_gemma":[0.98126334,0.016244503,0.0007810616,0.0009920589,0.00064135704,0.00007767284],"candidate_categories":["metaresearch","metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.030107254,0.00044165933,0.0024928497,0.00024813824,0.0018629347,0.00038245032,0.0012283098,0.0004630158,0.00046351002],"category_scores_gemma":[0.004043903,0.00025657078,0.0004118471,0.00023686237,0.0004680956,0.00008950373,0.0060838102,0.0014649836,0.0000017444737],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9826402,0.0021128154,0.0013871698,0.00022556195,0.002870234,4.75646e-7,0.0023538298,0.0000011310354,0.0015007235,0.00053214404,0.00065728585,0.0057184245],"study_design_scores_gemma":[0.8691293,0.015451039,0.0023527297,0.0001910258,0.0001222537,0.000006303659,0.0033494649,0.00015028052,0.00017206153,0.0015525643,0.10717977,0.000343196],"about_ca_topic_score_codex":0.0010432529,"about_ca_topic_score_gemma":0.00024609806,"teacher_disagreement_score":0.23294638,"about_ca_system_score_codex":0.00012753025,"about_ca_system_score_gemma":0.0006663705,"threshold_uncertainty_score":0.9999887},"labels":[],"label_agreement":null},{"id":"W4280582759","doi":"10.1016/j.vaccine.2022.04.086","title":"Decay of anti-Bordetella pertussis antibodies in women of childbearing age following COVID-19 non-pharmaceutical measures","year":2022,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Bordetella pertussis; Medicine; Pertussis toxin; Whooping cough; Pertactin; Pregnancy; Immunology; Vaccination; Internal medicine; Biology; G protein","score_opus":0.024940068005274513,"score_gpt":0.3070158368763404,"score_spread":0.2820757688710659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280582759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972626,0.0013423255,0.000034399734,0.00026159774,0.0006250779,0.00017502444,0.000030392182,0.000028589777,0.00024000317],"genre_scores_gemma":[0.999455,0.00020112307,0.000026358312,0.00009885513,0.000021480748,0.000018268836,0.000024173718,0.000014618544,0.00014016479],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99884945,0.00018888492,0.00041618224,0.00021855978,0.000030998708,0.00029593433],"domain_scores_gemma":[0.99948007,0.00014067156,0.00011712154,0.0002022292,0.000026297907,0.000033589626],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005327198,0.00013924789,0.0004768342,0.00030929892,0.00019314134,0.0000055769306,0.00018116062,0.000079735575,0.0012469892],"category_scores_gemma":[0.000118231874,0.00012636466,0.000119984914,0.0003666977,0.000018314226,0.0000534341,0.0002334147,0.00024152224,0.0000054748944],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030011596,0.00024028211,0.16102643,0.000050234652,0.00019697168,0.000008284675,0.0011260171,0.00016405099,0.83498406,0.000075512944,0.00026463994,0.0015633791],"study_design_scores_gemma":[0.008655284,0.0006223038,0.45332977,0.000064134896,0.00012157802,0.000101610676,0.002093518,0.000027272012,0.41441628,0.00008003286,0.12004103,0.0004471898],"about_ca_topic_score_codex":0.0007557931,"about_ca_topic_score_gemma":0.000056763434,"teacher_disagreement_score":0.4205678,"about_ca_system_score_codex":0.0000777971,"about_ca_system_score_gemma":0.000090560796,"threshold_uncertainty_score":0.99966604},"labels":[],"label_agreement":null},{"id":"W4281759909","doi":"10.1016/j.jim.2022.113306","title":"Naturally acquired antibody against Haemophilus influenzae type a in pediatric saliva","year":2022,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"NOSM University; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Canadian Immunization Research Network; Cystic Fibrosis Canada","keywords":"Saliva; Haemophilus influenzae; Antibody; Pasteurellaceae; Microbiology; Indigenous; Immunoglobulin A; Immunology; Biology; Medicine; Immunoglobulin G; Internal medicine","score_opus":0.034378927254807894,"score_gpt":0.36169124110489415,"score_spread":0.32731231385008625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281759909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9777928,0.01698774,0.00015500902,0.00040205996,0.0042391582,0.00012193037,0.0000059142326,0.00003075746,0.0002646599],"genre_scores_gemma":[0.98951775,0.0015828186,0.008278528,0.00026127073,0.00015810221,0.000007571808,0.00001619106,0.000015941057,0.00016184665],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99648803,0.0021206553,0.00082861976,0.00018672302,0.00003992704,0.00033602805],"domain_scores_gemma":[0.9985214,0.0005134588,0.0005486138,0.00020296188,0.00019000388,0.000023584213],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019079341,0.0001874436,0.00057257083,0.00045953164,0.00024752173,0.000023265042,0.0004639369,0.00024719277,0.0010216362],"category_scores_gemma":[0.00095947296,0.00013844186,0.00021026468,0.00081655255,0.000075173775,0.00015808176,0.0003425662,0.0010180657,0.000025444653],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012532712,0.00036888567,0.0101380935,0.0000070947713,0.00013117815,0.000040227522,0.00012912019,0.0000692304,0.9643748,0.00021154073,0.00032545053,0.022951126],"study_design_scores_gemma":[0.007024706,0.0070790863,0.78057057,0.000042422344,0.00019318602,0.0026567506,0.0007452776,0.000009408475,0.028912233,0.002109296,0.16992678,0.0007302546],"about_ca_topic_score_codex":0.000016886419,"about_ca_topic_score_gemma":0.0000010357776,"teacher_disagreement_score":0.93546253,"about_ca_system_score_codex":0.00011769115,"about_ca_system_score_gemma":0.00012091723,"threshold_uncertainty_score":0.9998916},"labels":[],"label_agreement":null},{"id":"W4282555644","doi":"10.1186/s12884-022-04809-6","title":"Do intentions lead to action? Results of a longitudinal study assessing determinants of Tdap vaccine uptake during pregnancy in Quebec, Canada","year":2022,"lang":"en","type":"article","venue":"BMC Pregnancy and Childbirth","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Université de Sherbrooke; Université Laval; Institut National de Santé Publique du Québec","funders":"Ministère de la Santé; Fonds de Recherche du Québec - Santé; Ministère de la Santé et des Services sociaux","keywords":"Medicine; Pregnancy; Vaccination; Feeling; Family medicine; Theory of planned behavior; Multivariate analysis; Immunology; Social psychology; Control (management); Internal medicine; Psychology","score_opus":0.03256795637296272,"score_gpt":0.29153364140724636,"score_spread":0.25896568503428363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282555644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960851,0.002561884,0.000014323705,0.000027001792,0.00057316537,0.00052493653,0.000109803404,0.000017198017,0.000086606684],"genre_scores_gemma":[0.9989977,0.000078593,0.000026784175,0.0000024499548,0.000012370776,0.0001015853,0.000018203214,0.000012365072,0.0007499877],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998529,0.0001981097,0.0006304877,0.00034922644,0.000047213176,0.00024596878],"domain_scores_gemma":[0.9992913,0.000058322832,0.00026631454,0.00029447707,0.00006699544,0.000022600274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107296146,0.00016627507,0.00038731744,0.00020784367,0.00031800213,0.000015251225,0.00014992112,0.000052267853,0.00010357397],"category_scores_gemma":[0.000070335256,0.00015850797,0.000050014864,0.00031340326,0.000021313634,0.00015716959,0.00021575912,0.00021777838,8.6362405e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048640132,0.00096096174,0.9689853,0.0001632906,0.00008417186,0.000010539681,0.0009772521,0.00007554496,0.020113917,0.000027361653,0.00005303537,0.008062178],"study_design_scores_gemma":[0.0033459107,0.0002967283,0.9871566,0.001070743,0.000035478,0.000056251767,0.0025588335,0.0000017894225,0.0051653907,0.000007882761,0.00014841971,0.00015592125],"about_ca_topic_score_codex":0.26189214,"about_ca_topic_score_gemma":0.9341949,"teacher_disagreement_score":0.6723028,"about_ca_system_score_codex":0.00007224119,"about_ca_system_score_gemma":0.00023799663,"threshold_uncertainty_score":0.743023},"labels":[],"label_agreement":null},{"id":"W4283708920","doi":"10.1097/inf.0000000000003609","title":"Timing of Monovalent Vaccine Administration in Infants Receiving DTaP-based Combination Vaccines in the United States","year":2022,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University College of the North","funders":"","keywords":"Medicine; Hib vaccine; Pediatrics; Rotavirus vaccine; Pneumococcal conjugate vaccine; Tetanus; Diphtheria; Immunization; Rotavirus; Vaccination; Virology; Diarrhea; Immunology; Conjugate vaccine; Internal medicine; Streptococcus pneumoniae; Antibiotics; Antigen","score_opus":0.014194151439881607,"score_gpt":0.25866742408515436,"score_spread":0.24447327264527274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283708920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971057,0.0004825967,0.00006420836,0.0010935618,0.0008750179,0.00030430828,0.000024808798,0.000019746316,0.000030022353],"genre_scores_gemma":[0.9992066,0.00035137852,0.0000028203124,0.00012905948,0.00012406855,0.000060074908,0.000098055716,0.000010707309,0.000017261236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99810386,0.0009640886,0.0005276715,0.00012268113,0.0000589285,0.00022276984],"domain_scores_gemma":[0.9988401,0.0004727072,0.00038291412,0.0001772029,0.0001064591,0.000020621139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001262797,0.0001335372,0.00017602614,0.00066369626,0.0005473201,0.000037048725,0.00021354738,0.000045227676,0.00049397006],"category_scores_gemma":[0.00022808967,0.00008956338,0.00008167619,0.0011099834,0.000014672494,0.000110623914,0.000054005097,0.000580828,0.0000044110902],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006478247,0.0010270074,0.9810858,0.000029129333,0.000033098207,0.00000865649,0.00077639666,0.013727831,0.0009106583,0.00007241924,0.0011520152,0.00052920106],"study_design_scores_gemma":[0.0036485759,0.0005219882,0.9914353,0.000016538737,0.00015223595,0.00025658307,0.0007368549,0.001305023,0.00013797502,0.0009634607,0.00066567713,0.00015980861],"about_ca_topic_score_codex":0.00040766934,"about_ca_topic_score_gemma":0.00016462604,"teacher_disagreement_score":0.0124228075,"about_ca_system_score_codex":0.000110093766,"about_ca_system_score_gemma":0.00017748863,"threshold_uncertainty_score":0.54086256},"labels":[],"label_agreement":null},{"id":"W4283815361","doi":"10.1016/j.wneu.2022.06.126","title":"Retrospective Review of the Clinical Outcomes of Surgically Managed Patients with Intracranial Abscesses: A Single-Center Review","year":2022,"lang":"en","type":"review","venue":"World Neurosurgery","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Impact; McMaster University","funders":"","keywords":"Medicine; Odds ratio; Hazard ratio; Retrospective cohort study; Modified Rankin Scale; Surgery; Glasgow Outcome Scale; Single Center; Confidence interval; Abscess; Glasgow Coma Scale; Diabetes mellitus; Internal medicine","score_opus":0.04876097231119279,"score_gpt":0.31134122565335115,"score_spread":0.26258025334215834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283815361","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00053865754,0.99243504,2.834549e-7,0.00014454116,0.004058427,0.001897891,0.00039142682,0.000031097326,0.00050263904],"genre_scores_gemma":[0.00015395135,0.9976981,0.0000032243222,0.0008182208,0.00004569476,0.00014663095,0.00025569228,0.000056483867,0.0008219858],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9943423,0.0022739419,0.0024412218,0.0005530887,0.000099053985,0.0002903401],"domain_scores_gemma":[0.9949376,0.0012872777,0.0026086136,0.000954665,0.00018525212,0.000026592777],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010429444,0.00047895795,0.0042628935,0.00018418202,0.00013746676,0.000009103917,0.00053311343,0.00016396174,0.0034120572],"category_scores_gemma":[0.0010834142,0.0002633764,0.0017966139,0.0011581487,0.00024684746,0.00006344995,0.0003711926,0.0010095331,0.000022889522],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018731844,0.00420294,0.14052251,0.30155396,0.0024046567,0.000016029246,0.0000063478487,1.8878556e-8,0.0000048746997,0.00011161406,0.053409465,0.49758026],"study_design_scores_gemma":[0.0003843384,0.00013600483,0.012267932,0.09642931,0.0013469611,0.00003600611,2.4925893e-7,9.99357e-10,5.559725e-7,0.000001353354,0.88918,0.00021725669],"about_ca_topic_score_codex":0.000011580037,"about_ca_topic_score_gemma":0.000019622934,"teacher_disagreement_score":0.83577055,"about_ca_system_score_codex":0.00005695349,"about_ca_system_score_gemma":0.00017482667,"threshold_uncertainty_score":0.9999818},"labels":[],"label_agreement":null},{"id":"W4287532156","doi":"","title":"Pertussis immunisation in infancy and atopic outcomes:A protocol for a population-based cohort study using linked administrative data","year":2021,"lang":"en","type":"article","venue":"UWA Profiles and Research Repository (University of Western Australia)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research","funders":"","keywords":"Cohort; Medicine; Protocol (science); Cohort study; Population; Pediatrics; Environmental health; Internal medicine; Alternative medicine","score_opus":0.21533416196306987,"score_gpt":0.42825699601418743,"score_spread":0.21292283405111756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287532156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98294914,0.000010931861,0.000023047236,0.00010057987,0.00005481752,0.016797964,0.000042421638,0.000009180711,0.0000119382885],"genre_scores_gemma":[0.99744606,0.0000021057974,0.0002125723,0.000001483778,0.000012686413,0.0004894497,0.00012126024,0.0000051803613,0.0017092095],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989334,0.00038018776,0.00017424386,0.00030895424,0.00004123972,0.00016201449],"domain_scores_gemma":[0.9992554,0.00014628902,0.00009529232,0.00029919192,0.00017971951,0.000024078634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037327743,0.000088320674,0.00023179517,0.00011200329,0.0004034988,0.000038653612,0.0001271658,0.00013331365,0.000035092533],"category_scores_gemma":[0.000041671603,0.00008604767,0.000027007874,0.0001240153,0.000115313465,0.00020672815,0.00017137647,0.00017364149,7.057757e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015401166,0.0002654885,0.9684197,0.0001209415,0.0000896703,0.0000072550533,0.00041668033,0.0000013608781,0.030325485,0.000026151183,0.000016748068,0.00015650663],"study_design_scores_gemma":[0.0020846087,0.00027223374,0.99160093,0.00008664734,0.000031468837,0.000012982182,0.002596885,0.00007165501,0.002778381,0.0000099717145,0.00036681787,0.00008739324],"about_ca_topic_score_codex":0.0056713284,"about_ca_topic_score_gemma":0.00048487162,"teacher_disagreement_score":0.027547104,"about_ca_system_score_codex":0.000027869028,"about_ca_system_score_gemma":0.00012716943,"threshold_uncertainty_score":0.85733896},"labels":[],"label_agreement":null},{"id":"W4288045783","doi":"10.1016/j.seizure.2022.07.016","title":"Post-vaccination drug-resistant epileptic spasms associated with homozygous IFNAR2 pathogenic variant: Case report✰","year":2022,"lang":"en","type":"article","venue":"Seizure","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Children's Hospital","funders":"Fonds de Recherche du Québec - Santé","keywords":"Dravet syndrome; Medicine; Encephalopathy; Pediatrics; Epilepsy; Vaccination; Rubella; MMR vaccine; Measles-Mumps-Rubella Vaccine; Virology; Measles; Internal medicine; Psychiatry","score_opus":0.0066135788857717105,"score_gpt":0.21096652494107507,"score_spread":0.20435294605530335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288045783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580055,0.0006001228,0.00003186308,0.00062990555,0.0013437469,0.00035770275,0.00044181963,0.00018836388,0.0006059288],"genre_scores_gemma":[0.9898531,0.0000070210167,0.000021004678,0.000113505375,0.00005986658,0.000112380716,0.0011950062,0.00003422976,0.008603877],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99849194,0.00039160493,0.00034375212,0.0003865028,0.000037383405,0.00034882495],"domain_scores_gemma":[0.99899656,0.00010389619,0.00028913908,0.0003886025,0.00019292596,0.000028886745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004269125,0.000207183,0.00027572297,0.00014467289,0.0010338319,0.00003288344,0.00012648037,0.00014022597,0.004341864],"category_scores_gemma":[0.00012738489,0.00017866673,0.00010173523,0.0003797539,0.00002944335,0.00010154133,0.00011661796,0.0004293153,0.00007040451],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022228316,0.0027418672,0.0035475665,0.000069071444,0.0024456051,0.18925393,0.0041422215,0.00034535967,0.75567156,0.0028779628,0.026993096,0.009688907],"study_design_scores_gemma":[0.007532763,0.0029805638,0.055835843,0.00006008051,0.0008840762,0.8190725,0.0042249723,0.00004277531,0.0048397905,0.0004364696,0.10266954,0.0014206185],"about_ca_topic_score_codex":0.00081126706,"about_ca_topic_score_gemma":0.0014347674,"teacher_disagreement_score":0.7508318,"about_ca_system_score_codex":0.00015035676,"about_ca_system_score_gemma":0.0001268895,"threshold_uncertainty_score":0.9965683},"labels":[],"label_agreement":null},{"id":"W4289110160","doi":"10.3390/antibiotics11081028","title":"Assessment of the Impact of a Meningitis/Encephalitis Panel on Hospital Length of Stay: A Systematic Review and Meta-Analysis","year":2022,"lang":"en","type":"review","venue":"Antibiotics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Group for Research in Decision Analysis","funders":"BioFire Diagnostics","keywords":"Meta-analysis; Meningitis; Encephalitis; Medicine; Systematic review; Virology; MEDLINE; Pediatrics; Biology; Pathology; Virus","score_opus":0.09212961749799028,"score_gpt":0.37387680463909057,"score_spread":0.28174718714110025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289110160","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010405572,0.9959848,0.000004313957,0.00001116918,0.00011661729,0.0012362038,0.0015205101,0.000005602144,0.00008022088],"genre_scores_gemma":[0.038858708,0.96075135,0.000018521283,0.0000044515737,0.000004277965,0.000007478905,0.00013045088,0.000015707139,0.00020904034],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9974582,0.0009428794,0.0011764425,0.00023370303,0.00004495183,0.00014378189],"domain_scores_gemma":[0.9969392,0.00038691438,0.0018882031,0.0006827454,0.00009147949,0.000011474287],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005371287,0.0002986358,0.005995038,0.0001794917,0.000067650144,0.000006486712,0.0002723913,0.00016782008,0.0010126836],"category_scores_gemma":[0.00012915526,0.00015143648,0.0030858985,0.00062004005,0.00011087491,0.000024933317,0.00016437759,0.0002543288,0.0000013787082],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000016894979,0.00043379967,0.00010917946,0.5803138,0.41732505,8.68979e-7,0.00005518424,0.0000021230546,0.00007397247,0.0008069438,0.00015882916,0.0007185404],"study_design_scores_gemma":[0.00011249192,0.0006972496,0.00027623112,0.014731533,0.980992,0.000038216367,0.00003691655,4.907257e-7,0.00005315597,0.0000051333022,0.0028437946,0.0002127642],"about_ca_topic_score_codex":0.00033769387,"about_ca_topic_score_gemma":0.0000058620562,"teacher_disagreement_score":0.5655823,"about_ca_system_score_codex":0.000039533617,"about_ca_system_score_gemma":0.00013911238,"threshold_uncertainty_score":0.9999005},"labels":[],"label_agreement":null},{"id":"W4289936611","doi":"10.1016/j.clinpr.2022.100160","title":"Spatial epidemiology of bacterial meningitis in the Upper West Region of Ghana: Analysis of disease surveillance data 2018–2020","year":2022,"lang":"en","type":"article","venue":"Clinical Infection in Practice","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"World Health Organization","keywords":"Outbreak; Meningitis; Spatial epidemiology; Geography; Epidemiology; Spatial analysis; Case fatality rate; Disease surveillance; Cluster (spacecraft); Spatial heterogeneity; Cartography; Demography; Medicine; Environmental health; Pediatrics; Biology; Ecology; Virology; Pathology","score_opus":0.0995949322202755,"score_gpt":0.4028971151405027,"score_spread":0.3033021829202272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289936611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949517,0.00029266105,0.0002749245,0.0013413052,0.0025016977,0.00021114433,0.0002808149,0.000009260503,0.00013645263],"genre_scores_gemma":[0.99817824,0.00075268943,0.000029354294,0.00010022724,0.00009623826,0.00003037504,0.0007842414,0.000006727362,0.000021898653],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9914909,0.0064037223,0.0015362684,0.00036710565,0.000033240372,0.00016876168],"domain_scores_gemma":[0.9889762,0.008846099,0.0012781951,0.0007649069,0.0001163081,0.000018317245],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.005752481,0.000112146554,0.0007288311,0.00027192492,0.00008317343,0.0000029437133,0.00031947045,0.00015906262,0.000990319],"category_scores_gemma":[0.011786428,0.00009347826,0.00019208944,0.0010471214,0.00023301748,0.00023214953,0.00033393325,0.0005282497,0.000005393354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021116142,0.0011227842,0.9919017,0.000015749676,0.00058216933,0.0000026636067,0.00010800108,0.00025278179,0.00075451506,0.00041617488,0.0013817223,0.0013501502],"study_design_scores_gemma":[0.0010456993,0.0005052819,0.97574073,0.0000103744815,0.0005412021,0.000024677645,0.00015925341,0.0001480659,0.00003361786,0.000050156414,0.021653293,0.000087676606],"about_ca_topic_score_codex":0.011422979,"about_ca_topic_score_gemma":0.0032576993,"teacher_disagreement_score":0.02027157,"about_ca_system_score_codex":0.000027993658,"about_ca_system_score_gemma":0.00009615008,"threshold_uncertainty_score":0.99992293},"labels":[],"label_agreement":null},{"id":"W4291618406","doi":"10.1371/journal.ppat.1010764","title":"Bps polysaccharide of Bordetella pertussis resists antimicrobial peptides by functioning as a dual surface shield and decoy and converts Escherichia coli into a respiratory pathogen","year":2022,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Ohio State University","keywords":"Microbiology; Bordetella pertussis; Biology; Pathogen; Escherichia coli; Antimicrobial peptides; Antimicrobial; Bacteria; Gene; Biochemistry","score_opus":0.011593293471104353,"score_gpt":0.21989956314941325,"score_spread":0.2083062696783089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4291618406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959032,0.002712289,0.000006794466,0.00018248433,0.00040506624,0.00025401358,0.0003924044,0.00006187228,0.000081882485],"genre_scores_gemma":[0.99868125,0.0002098927,0.0001263764,0.00028271478,0.000037212318,0.000033058506,0.00006606133,0.000032263124,0.00053115207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984877,0.0003640105,0.00037506444,0.00043657323,0.00003880256,0.00029783745],"domain_scores_gemma":[0.99928236,0.00017557116,0.00018879568,0.00023119274,0.000071770766,0.00005029649],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002903175,0.00022788593,0.00038989985,0.00010477293,0.00071149395,0.000034429904,0.00009241186,0.00017510375,0.0005489361],"category_scores_gemma":[0.00011913975,0.00023108973,0.000070191505,0.00019927204,0.00017247592,0.000095879725,0.00029249644,0.00028121306,0.000014230762],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033959904,0.00016767016,0.029571557,0.000045708715,0.00018742925,0.0000074265918,0.0012973133,0.0000026512741,0.9660765,0.00003984443,0.0018200414,0.00044423534],"study_design_scores_gemma":[0.0028089222,0.0016287726,0.01804138,0.000080558886,0.00043105942,0.0003442353,0.0028481625,0.000023142073,0.94350684,0.000073100186,0.029396417,0.0008174412],"about_ca_topic_score_codex":0.00050422596,"about_ca_topic_score_gemma":0.0000991775,"teacher_disagreement_score":0.027576376,"about_ca_system_score_codex":0.000037557173,"about_ca_system_score_gemma":0.00009642056,"threshold_uncertainty_score":0.9423566},"labels":[],"label_agreement":null},{"id":"W4291989150","doi":"","title":"Boostrix (GlaxoSmithKline).","year":2005,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GDI Integrated Facility Services (Canada)","funders":"","keywords":"Business; Psychology","score_opus":0.017000751276691175,"score_gpt":0.2146999132974994,"score_spread":0.19769916202080823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4291989150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98010504,0.0011410171,0.000036251397,0.0020133134,0.0015102586,0.00028764337,0.000013146201,0.00016530271,0.014728021],"genre_scores_gemma":[0.98617834,0.000036060377,0.000029860232,0.00018496136,0.00026827774,0.00032433646,0.000018606373,0.0000071711256,0.012952386],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994847,0.000028568506,0.00012209387,0.00011672532,0.000004676331,0.00024319571],"domain_scores_gemma":[0.999771,0.000026529337,0.000030862855,0.0001310182,0.000024517174,0.000016093234],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009769587,0.000070549984,0.000094126684,0.00005070007,0.00008298553,0.000012504148,0.00007101812,0.00009514723,0.0007296884],"category_scores_gemma":[0.000038372316,0.0000587111,0.00004630431,0.00006842444,0.000026577138,0.00008275645,0.000026679054,0.000090573565,0.00087963254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006672412,0.00015936958,0.005238119,0.0000037043624,0.00010389188,3.303858e-7,0.00004782806,0.000003330959,0.02799127,0.0015689513,0.083472446,0.881344],"study_design_scores_gemma":[0.00048448014,0.000008540269,0.12845862,7.5171005e-7,0.000010515851,0.000024977522,0.0000069392268,3.5704014e-7,0.02287141,0.00003001992,0.84803116,0.0000722456],"about_ca_topic_score_codex":0.00003038876,"about_ca_topic_score_gemma":0.000028514198,"teacher_disagreement_score":0.8812718,"about_ca_system_score_codex":0.000018374938,"about_ca_system_score_gemma":0.00000654317,"threshold_uncertainty_score":0.9998983},"labels":[],"label_agreement":null},{"id":"W4292315395","doi":"10.14740/jmc3974","title":"Fatal Meningitis and Sepsis Caused by Nontypeable <i>Haemophilus influenzae</i>","year":2022,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Lumbar puncture; Vomiting; Haemophilus influenzae; Meningitis; Nausea; Emergency department; Sepsis; Internal medicine; Diarrhea; Pediatrics; Antibiotics; Cerebrospinal fluid; Microbiology","score_opus":0.017683286185967904,"score_gpt":0.2684641714462745,"score_spread":0.25078088526030656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292315395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897966,0.006528404,0.000017937775,0.0021923815,0.0012391536,0.000037385656,0.00007187051,0.0000113224105,0.00010497162],"genre_scores_gemma":[0.9986878,0.0003360305,0.0000103739085,0.00043674177,0.00012703685,0.0000038675066,0.000018653882,0.000008047099,0.00037146208],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992076,0.00015063662,0.00031843598,0.00008692322,0.000080599086,0.00015580773],"domain_scores_gemma":[0.9994213,0.00022255923,0.00017177135,0.00006845467,0.00005141632,0.000064488704],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045072893,0.000083781786,0.0002376016,0.00007586803,0.00026884268,0.000016707336,0.00013534557,0.00009943465,0.0058444976],"category_scores_gemma":[0.0002882842,0.000066591754,0.000064909,0.000093081966,0.00007654702,0.000090105605,0.00013677025,0.0004622098,0.000009985935],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045198348,0.0004350158,0.006508218,0.000025613492,0.0004550265,0.0006633479,0.00037431403,0.0000071540653,0.23981921,0.00019552406,0.7362889,0.014775719],"study_design_scores_gemma":[0.0027345393,0.0012722661,0.0010812735,0.00003136545,0.000090400106,0.018351788,0.0004788116,0.000002958498,0.011189386,0.000053572658,0.9645768,0.00013686444],"about_ca_topic_score_codex":0.000233913,"about_ca_topic_score_gemma":0.000018326513,"teacher_disagreement_score":0.22862983,"about_ca_system_score_codex":0.000029023991,"about_ca_system_score_gemma":0.00009056465,"threshold_uncertainty_score":0.9950643},"labels":[],"label_agreement":null},{"id":"W4292411375","doi":"10.1016/j.idcr.2022.e01601","title":"Pneumococcal otogenic meningitis complicated by pneumocephalus, seizures, right-sided hemiplegia and cortical venous thrombosis","year":2022,"lang":"en","type":"article","venue":"IDCases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Pneumocephalus; Meningitis; Venous thrombosis; Streptococcus pneumoniae; Epilepsy; Intracranial Thrombosis; Bacterial meningitis; Thrombosis; Anesthesia; Surgery; Computed tomography; Antibiotics","score_opus":0.014653105692789237,"score_gpt":0.2449088815943791,"score_spread":0.23025577590158985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292411375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99531496,0.0023758018,0.000011386554,0.0003760082,0.0007586779,0.00025367542,0.00039383557,0.00017791415,0.00033771625],"genre_scores_gemma":[0.9985798,0.00007544891,0.000013890164,0.00010788919,0.000043585445,0.00013500624,0.00058051245,0.000024926552,0.00043891888],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99869245,0.00025066402,0.000288064,0.00037819232,0.000027539025,0.00036309674],"domain_scores_gemma":[0.99933165,0.00025872383,0.00008905547,0.00023724751,0.00003803623,0.000045258916],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011618602,0.00020133295,0.0003438116,0.00007204143,0.0010191572,0.000036001853,0.00014811306,0.00011335246,0.0041202498],"category_scores_gemma":[0.00005024584,0.00019148663,0.00007962288,0.00017208152,0.00015238438,0.00006826464,0.0002451588,0.00036178975,0.00009624695],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076377204,0.00039672523,0.002165171,0.0000069157486,0.00014766786,0.000015445477,0.00008597204,0.0000016966012,0.9750785,0.0003686679,0.021289835,0.00036702023],"study_design_scores_gemma":[0.0038338162,0.002476534,0.07253752,0.00003189239,0.00038494944,0.009228547,0.00042166334,0.000026402398,0.29988045,0.00041368467,0.60974765,0.0010168989],"about_ca_topic_score_codex":0.0005862101,"about_ca_topic_score_gemma":0.000033875684,"teacher_disagreement_score":0.6751981,"about_ca_system_score_codex":0.00005162096,"about_ca_system_score_gemma":0.00003527664,"threshold_uncertainty_score":0.9967901},"labels":[],"label_agreement":null},{"id":"W4297612004","doi":"10.1017/9781316536001.039","title":"Bacterial Meningitis","year":2022,"lang":"en","type":"book-chapter","venue":"Cambridge University Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Bacterial meningitis; Microbiology; Medicine; Meningitis; Biology; Pediatrics","score_opus":0.017932313189004696,"score_gpt":0.1918752868962554,"score_spread":0.1739429737072507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297612004","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003638164,0.00018337449,0.000008628699,0.000014901352,0.003185103,0.000258789,0.0011078579,0.00018979398,0.9914134],"genre_scores_gemma":[0.0029412408,0.00012903918,0.0000068760232,0.000012696198,0.00017194272,0.0000016944748,0.00082994817,0.00004418154,0.99586236],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99905735,0.000069733906,0.00017560227,0.00041506358,0.000022471731,0.00025975902],"domain_scores_gemma":[0.9992619,0.00004920016,0.00018958862,0.0003964582,0.00006852171,0.000034324363],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006169837,0.00031166733,0.00039583383,0.00016822675,0.000469896,0.000025315323,0.0003271968,0.0004581323,0.002075887],"category_scores_gemma":[0.0000050658514,0.0003755616,0.00023552707,0.0000060360358,0.00014225995,0.00007198757,0.0005125476,0.00056879147,0.0001245637],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027939636,0.00001494643,0.0000013604766,0.000020242105,0.000426294,0.00004948682,0.000026743937,2.5157917e-7,0.028616067,0.82846755,0.14075266,0.0013449865],"study_design_scores_gemma":[0.0009173426,0.00012419905,0.000013778988,0.000026519914,0.0002207889,0.000106732914,0.000011757842,1.2782328e-7,0.0029023793,0.0000027893097,0.9952989,0.00037465573],"about_ca_topic_score_codex":0.00039815044,"about_ca_topic_score_gemma":0.000004202184,"teacher_disagreement_score":0.85454625,"about_ca_system_score_codex":0.00015209132,"about_ca_system_score_gemma":0.00008048573,"threshold_uncertainty_score":0.99986964},"labels":[],"label_agreement":null},{"id":"W4297902528","doi":"10.1097/01.inf.0000147643.95195.37","title":"Meningococcal C Vaccines","year":2004,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"","keywords":"Medicine; Vaccination; Neisseria meningitidis; Outbreak; Immunization; Meningococcal disease; Meningococcal vaccine; Incidence (geometry); Glycoconjugate; Disease; Environmental health; Immunology; Pediatrics; Virology; Internal medicine; Biology; Antigen","score_opus":0.007732151670356212,"score_gpt":0.23127427370420553,"score_spread":0.22354212203384932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297902528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925657,0.0017464157,0.0003828847,0.0009521776,0.0034550524,0.00014415378,0.000009639904,0.00012100925,0.0006229788],"genre_scores_gemma":[0.99690294,0.0006257653,0.000009435701,0.00012799414,0.0019547797,0.000016335885,0.0000054284296,0.000017966311,0.00033935986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99906707,0.00013230459,0.00028941137,0.00014143845,0.000025588684,0.00034416787],"domain_scores_gemma":[0.99933803,0.000085165215,0.00016624796,0.00020515738,0.00012225632,0.000083141276],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026848726,0.00017106868,0.00016192145,0.00015560546,0.001025254,0.00008793567,0.00018658457,0.00009097677,0.001040649],"category_scores_gemma":[0.0001552032,0.00010496256,0.00018803291,0.00026925668,0.000041265004,0.00015763976,0.000060998278,0.00048229465,0.0007330484],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007201497,0.0014596955,0.93201834,0.000045557903,0.0006516198,0.000048285037,0.00081238215,0.0022038717,0.025245292,0.006142154,0.026235797,0.004416868],"study_design_scores_gemma":[0.014330835,0.00092199934,0.86200553,0.000036166293,0.002095251,0.0134357605,0.0002287487,0.0000049032315,0.0014792761,0.047128092,0.057167042,0.0011664206],"about_ca_topic_score_codex":0.000067446956,"about_ca_topic_score_gemma":0.000011407385,"teacher_disagreement_score":0.07001282,"about_ca_system_score_codex":0.00007468213,"about_ca_system_score_gemma":0.00020275213,"threshold_uncertainty_score":0.9998725},"labels":[],"label_agreement":null},{"id":"W4299166342","doi":"10.17615/r1bt-2c64","title":"Estimating the role of casual contact from the community in transmission of Bordetella pertussis to young infants","year":2019,"lang":"en","type":"article","venue":"UNC Libraries","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Sanofi Pasteur; Sanofi","keywords":"Bordetella pertussis; Casual; Transmission (telecommunications); Biology; Virology; Computer science; Political science; Bacteria; Genetics; Telecommunications","score_opus":0.01117229207098022,"score_gpt":0.22856242211756983,"score_spread":0.2173901300465896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4299166342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750537,0.00081558235,0.000041763196,0.0002652952,0.0002937155,0.00017361961,0.000045058325,0.000012263134,0.0008473388],"genre_scores_gemma":[0.99948514,0.00000391766,0.00032491636,0.00004971955,0.000015366493,0.0000046665677,0.000029272562,0.0000060264797,0.00008100458],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992822,0.0003096201,0.00022347388,0.00006830071,0.000012612442,0.00010383873],"domain_scores_gemma":[0.9989474,0.00068066583,0.000078437566,0.00026265942,0.000024037254,0.000006842823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001671752,0.00007892143,0.00019126861,0.000030767795,0.00014699172,0.000017122446,0.00021968622,0.00008837782,0.00048462913],"category_scores_gemma":[0.00008094936,0.000041508632,0.000042186362,0.00011347237,0.000063920415,0.00012465945,0.000084861545,0.00021335356,0.000013988395],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002488206,0.000072835646,0.24159677,0.00001008563,0.00006110625,4.850052e-8,0.015229077,0.000033911674,0.7303109,0.0031399203,0.000135953,0.009160554],"study_design_scores_gemma":[0.00087515026,0.0002913072,0.5209365,0.00018393678,0.00003159371,0.000004935074,0.0067163627,0.00012969534,0.4581289,0.0047647897,0.007809127,0.00012767088],"about_ca_topic_score_codex":0.011183723,"about_ca_topic_score_gemma":0.000437332,"teacher_disagreement_score":0.27933976,"about_ca_system_score_codex":0.000004202303,"about_ca_system_score_gemma":0.000037538728,"threshold_uncertainty_score":0.9954009},"labels":[],"label_agreement":null},{"id":"W4300688635","doi":"10.1017/cjn.2022.299","title":"A Canadian National Survey of the Neurosurgical Management of Intracranial Abscesses","year":2022,"lang":"en","type":"article","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Ottawa Hospital; University of Ottawa; University of Saskatchewan; University of Manitoba; Hôpital de l'Enfant-Jésus; Royal University Hospital; Université de Sherbrooke; Western University; Montreal Neurological Institute and Hospital; Foothills Medical Centre; University of Calgary; Vancouver General Hospital; Centre Hospitalier Universitaire de Sherbrooke; University of British Columbia; University of Alberta; Centre Hospitalier de l’Université de Montréal; Impact; Hamilton General Hospital; Dalhousie University; Royal Alexandra Hospital; McMaster University","funders":"","keywords":"Medicine; Neurosurgery; Abscess; Brain abscess; Intervention (counseling); General surgery; Surgery; Nursing","score_opus":0.03579720304132708,"score_gpt":0.2640532514815597,"score_spread":0.22825604844023265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300688635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930855,0.00064677454,0.0000022419633,0.0019035283,0.00259898,0.00013061885,0.00014460935,0.0000044521844,0.00148327],"genre_scores_gemma":[0.99916077,0.00010840861,0.000077708464,0.0005455229,0.000048500515,0.0000031020763,0.0000011541589,0.0000062366294,0.000048605238],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.995893,0.0018919768,0.0008796068,0.00029885364,0.00027004853,0.0007665163],"domain_scores_gemma":[0.99757373,0.0004776654,0.0008582622,0.00012487246,0.0006003634,0.00036511497],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["sts"],"category_scores_codex":[0.0048536453,0.00019615583,0.00039986137,0.0007197515,0.0031581616,0.00011179912,0.0021490129,0.000114212686,0.0010276756],"category_scores_gemma":[0.0008443798,0.00012455079,0.00020888828,0.0017513572,0.0034702278,0.0002847316,0.00014976252,0.00097283325,0.0000015211834],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015218269,0.0000720134,0.98897916,0.000009308072,0.000055569755,0.0003788542,0.00015165999,0.0041638883,0.00057985954,0.0024545596,0.0015291444,0.0014737896],"study_design_scores_gemma":[0.0004362743,0.016084766,0.95554304,0.000020313688,0.00003911147,0.015655186,0.00018693361,0.0000683926,0.00027938397,0.0033950142,0.008100338,0.00019124639],"about_ca_topic_score_codex":0.1058148,"about_ca_topic_score_gemma":0.62029094,"teacher_disagreement_score":0.5144762,"about_ca_system_score_codex":0.00023318677,"about_ca_system_score_gemma":0.0046453173,"threshold_uncertainty_score":0.9998855},"labels":[],"label_agreement":null},{"id":"W4300710991","doi":"","title":"Invasive Haemophilus influenzae disease in Manitoba in the post-vaccination era suggests a changing epidemiology.","year":2006,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Epidemiology; Haemophilus influenzae; Vaccination; Disease; Medicine; Virology; Microbiology; Biology; Pathology; Antibiotics","score_opus":0.02515451858303486,"score_gpt":0.24372482041586171,"score_spread":0.21857030183282686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300710991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99350446,0.0012362201,0.0000039997717,0.0034059759,0.0005761193,0.0008434898,0.00002014836,0.000037852165,0.00037173953],"genre_scores_gemma":[0.9973264,0.000041680585,0.0000045593565,0.0007448855,0.00013673457,0.0014423509,0.0001696696,0.00000985098,0.00012391049],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983657,0.00051395124,0.00035402345,0.0002372479,0.000011811808,0.0005172608],"domain_scores_gemma":[0.9991315,0.00048693857,0.00010834771,0.00020950555,0.000046584977,0.000017146976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090548565,0.00014146123,0.00022019127,0.00038781532,0.00011848032,0.000016079426,0.00016549946,0.00015304734,0.000043939086],"category_scores_gemma":[0.00067995966,0.00010556516,0.000060414506,0.00038244916,0.00003362454,0.00015612545,0.000055169236,0.0002625998,0.00005218302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020891069,0.00025364078,0.9737321,0.00002222174,0.000020414358,0.00001488832,0.00025669695,0.000094326846,0.0014643508,0.0031908418,0.0007675833,0.019974012],"study_design_scores_gemma":[0.0009363111,0.000016007505,0.9945748,0.000010917718,0.000012939028,0.000022802345,0.000111678106,0.000002658529,0.00027488533,0.0015941886,0.0023242675,0.00011853921],"about_ca_topic_score_codex":0.0036839058,"about_ca_topic_score_gemma":0.011454627,"teacher_disagreement_score":0.020842692,"about_ca_system_score_codex":0.000083609084,"about_ca_system_score_gemma":0.000026646567,"threshold_uncertainty_score":0.6391951},"labels":[],"label_agreement":null},{"id":"W4300962038","doi":"10.3389/fmicb.2022.929696","title":"Editorial: What is known and what remains to be discovered about bacterial outer membrane vesicles, volume II","year":2022,"lang":"en","type":"editorial","venue":"Frontiers in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; Dalhousie University","funders":"Fondo de Financiamiento de Centros de Investigación en Áreas Prioritarias; Comisión de Operación y Fomento de Actividades Académicas, Instituto Politécnico Nacional; Consejo Nacional de Ciencia y Tecnología","keywords":"Vesicle; Volume (thermodynamics); Membrane; Chemistry; Biology; Microbiology; Biophysics; Biochemistry; Physics; Thermodynamics","score_opus":0.005471077086887961,"score_gpt":0.22393454870049948,"score_spread":0.21846347161361152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300962038","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.045309026,0.012795915,0.000019440864,0.0019269538,0.9357394,0.00088241405,0.0032247987,0.0000855913,0.0000164887],"genre_scores_gemma":[0.00017124848,0.023642683,0.00025350085,0.0004936012,0.9479532,0.00027488338,0.016044555,0.00016289977,0.011003385],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951382,0.00088251714,0.0010868664,0.0016543836,0.00005751002,0.0011804828],"domain_scores_gemma":[0.9981062,0.00023145064,0.0004537878,0.00091098004,0.00020091263,0.00009671084],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007584975,0.0009300374,0.0018628908,0.00071588985,0.0006688878,0.0005583324,0.0008487426,0.003500001,0.0031747224],"category_scores_gemma":[0.00022722733,0.00092406606,0.0002933112,0.00034989134,0.00040621916,0.001242846,0.0014185753,0.0020204776,0.0001124536],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010747031,0.00012258267,0.00004189963,0.00005384661,0.0003676519,0.000004530394,0.0010709857,8.127746e-7,0.25374782,0.000004341968,0.7406257,0.0028851347],"study_design_scores_gemma":[0.0030352662,0.00085915683,0.000022550781,0.00022573528,0.00016456883,0.00004278139,0.001152943,2.4049703e-7,0.004201868,0.00004683688,0.9892879,0.0009601516],"about_ca_topic_score_codex":0.0003979398,"about_ca_topic_score_gemma":0.00041560526,"teacher_disagreement_score":0.24954596,"about_ca_system_score_codex":0.0004773938,"about_ca_system_score_gemma":0.00039303367,"threshold_uncertainty_score":0.999321},"labels":[],"label_agreement":null},{"id":"W4301013122","doi":"","title":"Food and Drug Administration approval of a fifth acellular pertussis vaccine for use among infants and young children--United States, 2002.","year":2002,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Food and drug administration; Diphtheria; Tetanus; Pertussis vaccine; Vaccination; Pediatrics; Whooping cough; Immunization; Immunology; Environmental health; Antibody","score_opus":0.01600607175551671,"score_gpt":0.19669605275438168,"score_spread":0.18068998099886496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4301013122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972735,0.0013058237,0.00005235141,0.00013329586,0.00019869301,0.00078389636,0.00020440992,0.000032090204,0.000015956162],"genre_scores_gemma":[0.99791855,0.00042592088,0.000054473174,0.000018367647,0.000030179299,0.0002955723,0.00031832658,0.0000123593245,0.0009262632],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99928004,0.00005760984,0.00022431815,0.00020165613,0.000010815058,0.00022558402],"domain_scores_gemma":[0.9995941,0.000070313756,0.00011357474,0.00012949065,0.00006041686,0.000032083193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013396991,0.00012635876,0.00019907308,0.00012857589,0.00012540996,0.000036225316,0.000043605705,0.00011878443,0.00006252123],"category_scores_gemma":[0.00007902178,0.00010767334,0.000034283028,0.00011427667,0.000052322812,0.0001881288,0.00003247083,0.000081269725,0.0000011411452],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013610712,0.0008736323,0.8810422,0.00014757489,0.0012813375,0.0000010527434,0.0023312327,0.0000038382,0.011999674,0.00028476148,0.0126927495,0.087980874],"study_design_scores_gemma":[0.0026524565,0.00026049887,0.9792306,0.000009776196,0.000110226254,0.00006207481,0.000061276725,0.00010402502,0.007330828,0.000019287163,0.0099828085,0.00017615451],"about_ca_topic_score_codex":0.0002620893,"about_ca_topic_score_gemma":0.00025042164,"teacher_disagreement_score":0.098188385,"about_ca_system_score_codex":0.0000068476215,"about_ca_system_score_gemma":0.0000036982956,"threshold_uncertainty_score":0.43907914},"labels":[],"label_agreement":null},{"id":"W4301141269","doi":"","title":"Pertussis in Newfoundland and Labrador: 1991-2004.","year":2005,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Geography","score_opus":0.012949063910522526,"score_gpt":0.2106020006264927,"score_spread":0.19765293671597017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4301141269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938395,0.0021231272,0.0000019735571,0.0013058821,0.0003663569,0.00016695968,0.000006125026,0.000036005964,0.002154046],"genre_scores_gemma":[0.9955192,0.00011371426,0.0000137815905,0.00013087805,0.00009203536,0.00017702559,0.00001817455,0.0000058811715,0.0039292844],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9994896,0.00003863376,0.00011547113,0.0001308505,0.000004470601,0.00022094186],"domain_scores_gemma":[0.9998301,0.000032994834,0.000022375589,0.00008857699,0.000009180514,0.000016740763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010735766,0.00007181864,0.00011376122,0.00008068616,0.000058909154,0.000017477254,0.000040960495,0.00010039575,0.00018523385],"category_scores_gemma":[0.000026210948,0.000058647453,0.000019515348,0.00007819412,0.00003421911,0.000098352204,0.000025566445,0.000092544484,0.00006950499],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008751205,0.00014456455,0.20752913,0.000007637844,0.00005358154,8.3829366e-7,0.00023176843,0.0000023025866,0.008924672,0.0006766711,0.0042314865,0.77810985],"study_design_scores_gemma":[0.0006238289,0.0000075506805,0.64184767,0.0000015441702,0.0000055535907,0.000027285858,0.000011302744,7.607444e-7,0.0002617717,0.000024643508,0.3571306,0.000057533653],"about_ca_topic_score_codex":0.001980252,"about_ca_topic_score_gemma":0.0059684427,"teacher_disagreement_score":0.77805233,"about_ca_system_score_codex":0.000039471746,"about_ca_system_score_gemma":0.000004362581,"threshold_uncertainty_score":0.3330531},"labels":[],"label_agreement":null},{"id":"W4306247862","doi":"10.1590/0074-02760220118","title":"Characterisation of Neisseria meningitidis cc11/ET-15 variant by whole genome sequencing","year":2022,"lang":"en","type":"article","venue":"Memórias do Instituto Oswaldo Cruz","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Fundação Oswaldo Cruz; University of Oxford; Conselho Nacional de Desenvolvimento Científico e Tecnológico; European Commission; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Wellcome Trust","keywords":"Neisseria meningitidis; Outbreak; Meningococcal disease; Biology; Genome; Virulence; clone (Java method); Genetics; Virology; Gene; Bacteria","score_opus":0.01756458109159065,"score_gpt":0.2388950376664545,"score_spread":0.22133045657486386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306247862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99262357,0.0008425,0.00033947037,0.00041010362,0.0026608475,0.00035685065,0.0006160977,0.00012694532,0.0020236264],"genre_scores_gemma":[0.9965819,0.00005031247,0.00008861922,0.00016962386,0.00008703688,0.00013805412,0.0011159866,0.000031525913,0.0017369136],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983663,0.00029602554,0.00055123045,0.00039312107,0.000041510833,0.00035179543],"domain_scores_gemma":[0.9991095,0.0000523791,0.0003217046,0.00039791648,0.00008462787,0.000033872708],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00050419266,0.0002458234,0.00041597814,0.00018882124,0.00059968996,0.000053360378,0.0002804998,0.0001478023,0.005775913],"category_scores_gemma":[0.00006036922,0.000248304,0.00012776423,0.0003190207,0.00008679291,0.00033673635,0.0002440107,0.00036064346,0.00019097657],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001266845,0.0001378128,0.0002870353,0.000020021555,0.00013414565,0.000004253067,0.0011978728,0.00011286599,0.99264807,0.0026039102,0.0017879632,0.00093937165],"study_design_scores_gemma":[0.001969602,0.00045828888,0.005518642,0.00002932862,0.00010037043,0.0003931329,0.0008949941,0.000013210892,0.09142531,0.00020462883,0.8985217,0.00047075612],"about_ca_topic_score_codex":0.000821212,"about_ca_topic_score_gemma":0.000039245133,"teacher_disagreement_score":0.90122277,"about_ca_system_score_codex":0.00020650063,"about_ca_system_score_gemma":0.00019716038,"threshold_uncertainty_score":0.9999969},"labels":[],"label_agreement":null},{"id":"W4306957113","doi":"10.1016/j.jinf.2022.10.022","title":"Meningococcal disease in North America: Updates from the Global Meningococcal Initiative","year":2022,"lang":"en","type":"review","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Public Health Agency of Canada; University of Alberta; BC Children's Hospital; University of British Columbia","funders":"Sanofi Pasteur; National Institutes of Health","keywords":"Meningococcal vaccine; Meningococcal disease; Outbreak; Carriage; Neisseria meningitidis; Epidemiology; Pandemic; Vaccination; Medicine; Public health; Conjugate vaccine; Herd immunity; Virology; Disease; Environmental health; Immunization; Immunology; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Biology","score_opus":0.042835070477530185,"score_gpt":0.3127478426468306,"score_spread":0.26991277216930043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306957113","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038316634,0.95694834,0.000053966996,0.000077430705,0.0037326743,0.00036278926,0.00037027898,0.000023362227,0.00011452353],"genre_scores_gemma":[0.0044855447,0.99431294,0.000009062908,0.000050728202,0.00052441173,0.00006211422,0.00051914406,0.000020442983,0.000015604102],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975019,0.001079203,0.000935789,0.00021309053,0.00003995702,0.00023004366],"domain_scores_gemma":[0.9979213,0.00050832477,0.0012540474,0.00019396245,0.00008100086,0.000041398813],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029122608,0.00031173273,0.0010427665,0.0001780777,0.00025803494,0.00004794987,0.00022075533,0.00019818927,0.0018386028],"category_scores_gemma":[0.0003029314,0.00019648929,0.0005885617,0.00069313427,0.0000839388,0.00020435266,0.00014809855,0.0011725901,0.000077803976],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037991963,0.0006011517,0.060108136,0.00032106246,0.0018149591,0.000037689835,0.0003361445,0.000058762824,0.000016033471,0.00008543842,0.004768522,0.9314722],"study_design_scores_gemma":[0.00048008753,0.0002261378,0.018327225,0.0005536783,0.00071375124,0.00014643863,0.00003357972,5.9796264e-7,0.0000010569233,0.000060320563,0.97927374,0.00018338951],"about_ca_topic_score_codex":0.0007886459,"about_ca_topic_score_gemma":0.00042015148,"teacher_disagreement_score":0.9745052,"about_ca_system_score_codex":0.0004623518,"about_ca_system_score_gemma":0.0003632279,"threshold_uncertainty_score":0.99907386},"labels":[],"label_agreement":null},{"id":"W4307054515","doi":"10.1093/pch/pxac100.056","title":"57 Update of IMPACT Invasive Meningococcal Surveillance, 2016-2020","year":2022,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; Hospital for Sick Children; Canadian Institute for Advanced Research; University of British Columbia","funders":"","keywords":"Medicine; Neisseria meningitidis; Meningococcal vaccine; Epidemiology; Pediatrics; Conjugate vaccine; Meningococcal disease; Age groups; Young adult; Immunization; Demography; Internal medicine; Immunology","score_opus":0.008827606827532404,"score_gpt":0.26032378604835893,"score_spread":0.2514961792208265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307054515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98314226,0.010024944,0.000034977547,0.0025491875,0.0022036713,0.00039242275,0.0009271899,0.00007913213,0.00064620207],"genre_scores_gemma":[0.9955928,0.0029819927,0.000029600906,0.0003949306,0.00024758308,0.00002988226,0.00058718334,0.000020064797,0.00011598018],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836147,0.00044526524,0.00046849265,0.00026471325,0.000032613665,0.00042744164],"domain_scores_gemma":[0.9990522,0.00017332801,0.00038447557,0.000265677,0.000068533096,0.000055771794],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00065959996,0.00016399294,0.00042175435,0.00017676566,0.0006132338,0.000008405303,0.00020269743,0.00008840664,0.0022650901],"category_scores_gemma":[0.00007957561,0.00014605137,0.00015804156,0.00054232334,0.00003921293,0.000054729797,0.00022080094,0.00046934007,0.000106264015],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063619035,0.0009368078,0.5679109,0.00016719021,0.00047235456,0.000003474672,0.0013613582,0.00027816492,0.014614988,0.00233839,0.40220147,0.009078702],"study_design_scores_gemma":[0.004515933,0.002512293,0.5787356,0.000019670515,0.000052011008,0.00031019122,0.0003460016,0.00000693507,0.0012166472,0.0004709084,0.41120973,0.0006041023],"about_ca_topic_score_codex":0.001043304,"about_ca_topic_score_gemma":0.000123954,"teacher_disagreement_score":0.013398341,"about_ca_system_score_codex":0.00012944391,"about_ca_system_score_gemma":0.0004870423,"threshold_uncertainty_score":0.998647},"labels":[],"label_agreement":null},{"id":"W4308314557","doi":"10.1038/s42003-022-04173-3","title":"A substrate-induced gating mechanism is conserved among Gram-positive IgA1 metalloproteases","year":2022,"lang":"en","type":"article","venue":"Communications Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Biological and Environmental Research; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Office of Science; U.S. Department of Health and Human Services; National Institutes of Health; Oregon Health and Science University; U.S. Department of Energy","keywords":"Gating; Virulence; Substrate (aquarium); Biology; Affinities; Chemistry; Microbiology; Biophysics; Biochemistry","score_opus":0.05069155867602463,"score_gpt":0.2924586138506053,"score_spread":0.24176705517458066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308314557","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942103,0.001034065,0.00008375411,0.0016001201,0.00056191284,0.00046921946,0.0002506747,0.00015835265,0.0016316001],"genre_scores_gemma":[0.9971283,0.0000919662,0.0003009256,0.00032355718,0.000017295582,0.00064086175,0.0010359796,0.000019211595,0.00044188838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776316,0.0012229217,0.00038805848,0.00030094196,0.000012422628,0.00031247476],"domain_scores_gemma":[0.99805564,0.00034271326,0.0002432219,0.001203098,0.00012946154,0.000025875484],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036214312,0.00018834767,0.00031161294,0.00015352387,0.0017841759,0.000022784086,0.0008539743,0.00018225395,0.002321801],"category_scores_gemma":[0.00008646317,0.00018648492,0.000136549,0.00031560104,0.00028113162,0.00008188177,0.00096102466,0.00058671844,0.00013438251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042292108,0.0002901611,0.0072413874,0.000003405263,0.00031750667,5.32476e-7,0.00053993374,8.325695e-7,0.93925977,0.05087006,0.00039468694,0.0010394282],"study_design_scores_gemma":[0.005008398,0.0024140526,0.061072327,0.000055334465,0.0005425261,0.0006204426,0.0075524715,0.0002510255,0.7739108,0.03184305,0.11503791,0.0016916653],"about_ca_topic_score_codex":0.0019539387,"about_ca_topic_score_gemma":0.00033955215,"teacher_disagreement_score":0.16534898,"about_ca_system_score_codex":0.00006264397,"about_ca_system_score_gemma":0.00008574044,"threshold_uncertainty_score":0.99951535},"labels":[],"label_agreement":null},{"id":"W4308954631","doi":"10.1016/j.annepidem.2022.11.002","title":"Developing a reference standard for pertussis by applying a stratified sampling strategy to electronic medical record data","year":2022,"lang":"en","type":"article","venue":"Annals of Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Vector Institute; St. Michael's Hospital; Public Health Ontario; University of Toronto","funders":"Canadian Institutes of Health Research; World Health Organization","keywords":"Medicine; Stratified sampling; Sampling (signal processing); Statistics; Cohort; Sample (material); Pertussis vaccine; Computer science; Mathematics; Pathology; Filter (signal processing)","score_opus":0.36650296029872487,"score_gpt":0.4521447873962643,"score_spread":0.08564182709753942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308954631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86486465,0.005419285,0.10712717,0.017402602,0.0010664837,0.0011783562,0.0025765882,0.0001099505,0.0002549031],"genre_scores_gemma":[0.98962736,0.0010169236,0.0024382165,0.003097671,0.00008536768,0.0005816243,0.0029148103,0.000025220634,0.00021281722],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970683,0.0007900956,0.00080798793,0.0005562692,0.000027263806,0.00075007294],"domain_scores_gemma":[0.9967651,0.002258441,0.0002829924,0.0005063841,0.00013132235,0.000055809272],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0046147574,0.00017037369,0.0006774149,0.00011341835,0.00039750015,0.000005574609,0.00065293815,0.00022274695,0.0014382435],"category_scores_gemma":[0.0038066378,0.00015516687,0.00007358872,0.00018372913,0.00007082047,0.000077342585,0.00044336182,0.00042542483,0.000010181164],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034194912,0.0002496682,0.0046304306,0.000120274184,0.001043104,9.583938e-7,0.0001668085,0.00013911887,0.16492411,0.13452664,0.24913032,0.44164908],"study_design_scores_gemma":[0.0005530468,0.0016789762,0.00048561115,0.000026911608,0.000024000907,0.000035453617,0.00022647568,0.00005197238,0.0021821684,0.0072007785,0.98730123,0.00023339438],"about_ca_topic_score_codex":0.00075229525,"about_ca_topic_score_gemma":0.00040715447,"teacher_disagreement_score":0.73817086,"about_ca_system_score_codex":0.000041797106,"about_ca_system_score_gemma":0.0004938951,"threshold_uncertainty_score":0.9994746},"labels":[],"label_agreement":null},{"id":"W4310041558","doi":"10.3390/vaccines10121990","title":"Vaccination in Pregnancy against Pertussis: A Consensus Statement on Behalf of the Global Pertussis Initiative","year":2022,"lang":"en","type":"review","venue":"Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"Michael Smith Health Research BC","keywords":"Medicine; Vaccination; Pregnancy; Pertussis vaccine; Whooping cough; Pediatrics; Family medicine; Immunization; Immunology; Antibody","score_opus":0.06753223521115587,"score_gpt":0.3291170946334302,"score_spread":0.26158485942227433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310041558","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0048556225,0.98865855,5.984616e-7,0.00022825041,0.0023013006,0.0013650539,0.00075479224,0.000044548873,0.0017912886],"genre_scores_gemma":[0.006693634,0.991887,0.00000492343,0.00004892415,0.000046230925,0.00053265406,0.0003583891,0.00003339111,0.00039489308],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99715686,0.0009931612,0.0010218871,0.00046269156,0.00004367952,0.00032174203],"domain_scores_gemma":[0.9982089,0.00038066407,0.0008019676,0.0005106379,0.00008077843,0.000017048422],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021938788,0.00045586718,0.0012202424,0.00025672797,0.00023704678,0.000017728029,0.0003893055,0.00033810711,0.0016185932],"category_scores_gemma":[0.00025197509,0.00028318484,0.00046555052,0.00078510505,0.000024299019,0.000049898612,0.00026464215,0.00046034864,0.00004284235],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009818688,0.000711197,0.00096135493,0.002498522,0.0006354066,0.0000047587464,0.00026305747,0.0000059655326,0.000025915917,0.00063695316,0.002908566,0.9912501],"study_design_scores_gemma":[0.0010491181,0.00024739827,0.0034025984,0.005252211,0.0003997293,0.00004020164,0.00019325696,7.177349e-7,0.00004200402,0.000054109114,0.98899084,0.00032781943],"about_ca_topic_score_codex":0.00017512182,"about_ca_topic_score_gemma":0.00030796565,"teacher_disagreement_score":0.9909223,"about_ca_system_score_codex":0.00042883796,"about_ca_system_score_gemma":0.00034474675,"threshold_uncertainty_score":0.99996203},"labels":[],"label_agreement":null},{"id":"W4310554245","doi":"10.1016/s2352-4642(22)00343-1","title":"Assessment of infant position and timing of stylet removal to improve lumbar puncture success in neonates (NeoCLEAR): an open-label, 2 × 2 factorial, randomised, controlled trial","year":2022,"lang":"en","type":"article","venue":"The Lancet Child & Adolescent Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"Sanofi Pasteur; Seqirus; National Institute for Health and Care Research; NIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer Research; Chiesi Farmaceutici; Sanofi; GlaxoSmithKline; Pfizer","keywords":"Stylet; Medicine; Lumbar puncture; Gestational age; Lumbar; Sitting; Randomized controlled trial; Surgery; Cerebrospinal fluid; Anesthesia; Internal medicine; Pregnancy; Biology","score_opus":0.02447619413507729,"score_gpt":0.32842081408791557,"score_spread":0.3039446199528383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310554245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99007434,0.0006305342,0.00003605635,0.002781568,0.0018596889,0.004321783,0.00016914097,0.000018147428,0.00010875765],"genre_scores_gemma":[0.99830997,0.00026683096,0.0000652933,0.0007208761,0.00036858453,0.00012867276,0.00011066283,0.0000137908,0.000015345737],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9975555,0.0012107956,0.0006206597,0.00026783004,0.00004964079,0.00029556642],"domain_scores_gemma":[0.9990552,0.000100682184,0.000438399,0.00031715873,0.000052828644,0.000035730744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017372897,0.00016257666,0.0010065592,0.000103498176,0.0003421741,0.0000288314,0.00032765794,0.000072542294,0.00013006662],"category_scores_gemma":[0.000053965312,0.00011147597,0.000043792857,0.00015461975,0.000044688764,0.00009797143,0.00027749786,0.0005748423,5.968485e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.5795011,0.0030054697,0.0036283329,0.0002145692,0.00029793766,0.0000017193811,0.0016457941,0.00016423386,0.3991094,0.0021388372,0.0021474147,0.008145186],"study_design_scores_gemma":[0.91357285,0.005024096,0.07338272,0.00017917475,0.000074266725,0.000055444365,0.00027325252,0.000100597164,0.0016511113,0.00010342616,0.005335055,0.0002480281],"about_ca_topic_score_codex":0.0016610696,"about_ca_topic_score_gemma":0.0002791626,"teacher_disagreement_score":0.39745829,"about_ca_system_score_codex":0.000088150344,"about_ca_system_score_gemma":0.00016793355,"threshold_uncertainty_score":0.45458582},"labels":[],"label_agreement":null},{"id":"W4310818138","doi":"10.1097/inf.0000000000003753","title":"A Randomized Trial Assessing the Immunogenicity and Reactogenicity of Two Hexavalent Infant Vaccines Concomitantly Administered With Group B Meningococcal Vaccine","year":2022,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"First Nations Health and Social Secretariat of Manitoba","funders":"","keywords":"Reactogenicity; Medicine; Immunogenicity; Neisseria meningitidis; Randomized controlled trial; Group B; Pediatrics; Internal medicine; Immunology; Gastroenterology; Antibody","score_opus":0.013190322814781915,"score_gpt":0.2727250644622437,"score_spread":0.25953474164746176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310818138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99240065,0.0039348244,0.00016678078,0.00044583247,0.0016504276,0.0012256842,0.00005136604,0.00004810605,0.00007634218],"genre_scores_gemma":[0.9983243,0.0006452565,0.000010012144,0.00009069312,0.00064261805,0.00019182797,0.00001525772,0.000026022846,0.000054027],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9958953,0.0025312952,0.0008571138,0.00025063465,0.00009794038,0.00036770815],"domain_scores_gemma":[0.99693596,0.0014185574,0.0010291752,0.00036876067,0.0001702302,0.00007732873],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.002645442,0.00029458205,0.00072321895,0.00018519392,0.00208716,0.00013029366,0.00031288352,0.00006220319,0.0005623896],"category_scores_gemma":[0.0003614478,0.00015000282,0.0003670274,0.0003841033,0.00014574031,0.00018547334,0.0003070636,0.0009160849,0.0000029303565],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.777769,0.0011799298,0.20472658,0.00004049521,0.0018804912,0.000017694389,0.00086668145,0.0001723772,0.011497411,0.00047991332,0.00074469356,0.0006247325],"study_design_scores_gemma":[0.93348587,0.0017984832,0.05293229,0.000017506909,0.004058482,0.004687817,0.00043926915,0.00006769881,0.0001959852,0.000932606,0.0009643566,0.000419656],"about_ca_topic_score_codex":0.0004114186,"about_ca_topic_score_gemma":0.000040706003,"teacher_disagreement_score":0.15571685,"about_ca_system_score_codex":0.000081824,"about_ca_system_score_gemma":0.0003009125,"threshold_uncertainty_score":0.99921197},"labels":[],"label_agreement":null},{"id":"W4312190515","doi":"10.1186/s12987-022-00400-5","title":"Bacterial ribosomal RNA detection in cerebrospinal fluid using a viromics approach","year":2022,"lang":"en","type":"article","venue":"Fluids and Barriers of the CNS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"European Research Council; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw; European Commission","keywords":"Neisseria meningitidis; Streptococcus pneumoniae; Pathogen; Ribosomal RNA; Listeria monocytogenes; Biology; Microbiology; Haemophilus influenzae; Meningitis; Virology; Bacteria; Medicine; Antibiotics; Gene; Genetics","score_opus":0.011244469320455983,"score_gpt":0.2157154421622292,"score_spread":0.20447097284177324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312190515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976051,0.00019236519,0.00009693064,0.000044422013,0.0017094384,0.00014925888,0.00006794924,0.00001242221,0.00012214296],"genre_scores_gemma":[0.9997038,0.000011585579,0.000057850764,0.000020362178,0.00006166778,0.00001546762,0.000013344879,0.000009522627,0.00010636814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99925774,0.00017120216,0.0002214574,0.00016342897,0.000016917551,0.0001692375],"domain_scores_gemma":[0.99972373,0.000013447069,0.000073152725,0.00015725392,0.000016320315,0.00001611516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019474725,0.000100171375,0.00017454562,0.0000748436,0.00048532264,0.000012241097,0.0001327111,0.00008835874,0.0004614421],"category_scores_gemma":[0.000030764542,0.00007932953,0.00007255076,0.00016356351,0.00010423123,0.00006132632,0.00022353868,0.00020511194,0.0000010156753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002480115,0.000041122454,0.002582461,0.000008046404,0.00003174581,1.17511455e-7,0.0002047981,0.000052215102,0.99602413,0.00015321562,0.00008329444,0.0005708173],"study_design_scores_gemma":[0.0051481375,0.0009796572,0.053065434,0.000031985703,0.00016012507,0.0005011522,0.0019295204,0.001411048,0.90858936,0.00036659974,0.027284084,0.0005329114],"about_ca_topic_score_codex":0.00040067805,"about_ca_topic_score_gemma":0.000022666114,"teacher_disagreement_score":0.08743481,"about_ca_system_score_codex":0.000051969964,"about_ca_system_score_gemma":0.000047982518,"threshold_uncertainty_score":0.50524676},"labels":[],"label_agreement":null},{"id":"W4312698811","doi":"10.9778/cmajo.20220058","title":"Trends and characteristics of Tdap vaccination during pregnancy in Ontario, Canada: a retrospective cohort study","year":2022,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Sanofi Pasteur; Moderna; Novavax; Sanofi; GlaxoSmithKline; Seqirus; AstraZeneca; Pfizer","keywords":"Medicine; Vaccination; Pregnancy; Tetanus; Diphtheria; Toxoid; Retrospective cohort study; Pediatrics; Cohort; Population; Prenatal care; Obstetrics; Demography; Immunology; Environmental health; Surgery; Internal medicine","score_opus":0.012870453755948318,"score_gpt":0.24344182077528306,"score_spread":0.23057136701933476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312698811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977435,0.00006594677,2.2680143e-7,0.00003856055,0.00043696136,0.00044662776,0.000044089487,0.0000052142177,0.0012188979],"genre_scores_gemma":[0.99516267,0.000005829722,0.000001814614,0.0000037731113,0.0000047024027,0.00015632212,0.0000674884,0.0000057725865,0.004591625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99939245,0.00009975926,0.00020478538,0.00018045503,0.000015596755,0.00010692743],"domain_scores_gemma":[0.99970496,0.000013061896,0.00010776986,0.00013358079,0.00003325571,0.0000073611786],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000112004025,0.00007306757,0.00024516915,0.0000908534,0.00017986594,0.00001283028,0.00012732352,0.000028355893,0.0034674704],"category_scores_gemma":[0.000014406587,0.000074082076,0.000011996974,0.00014075456,0.0000069106604,0.000079058984,0.00032818608,0.00017944655,6.910174e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008202092,0.00019509553,0.99198043,0.000003602941,0.000064093314,0.000003808511,0.0007261985,5.2428146e-7,0.0053768177,0.000057382294,0.00011471424,0.0013953132],"study_design_scores_gemma":[0.0012089671,0.00021015428,0.99686223,0.000012371574,0.00002146894,0.00001919996,0.0002883782,2.96953e-7,0.00047070417,0.0000089622245,0.0008196419,0.000077628014],"about_ca_topic_score_codex":0.97141343,"about_ca_topic_score_gemma":0.9910783,"teacher_disagreement_score":0.01966485,"about_ca_system_score_codex":0.00038476515,"about_ca_system_score_gemma":0.00014837582,"threshold_uncertainty_score":0.9974435},"labels":[],"label_agreement":null},{"id":"W4313321122","doi":"10.1099/jmm.0.001615","title":"Characterization of invasive meningococcal disease case isolates in Atlantic Canada, 2014 to 2020: spatial–temporal variations of clones and predicted meningococcal B vaccine coverage","year":2022,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Government of Manitoba; Government of Prince Edward Island; Government of New Brunswick; Memorial University of Newfoundland; Public Health Agency of Canada; Nova Scotia Health Authority; Government of Newfoundland and Labrador; Dalhousie University; Government of Nova Scotia","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Neisseria meningitidis; Multilocus sequence typing; Serotype; Meningococcal disease; Biology; Typing; Meningococcal vaccine; Molecular epidemiology; Locus (genetics); Nova scotia; Virology; Microbiology; Genotype; Genetics; Geography; Gene; Bacteria","score_opus":0.004895257346997753,"score_gpt":0.21584679472284604,"score_spread":0.2109515373758483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313321122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99463326,0.00027646168,0.0005915284,0.0027016753,0.0010394591,0.00023136358,0.00052010093,0.0000045862703,0.0000015433362],"genre_scores_gemma":[0.99920577,0.00015276954,0.000023139703,0.00014305823,0.00008903436,0.000012037852,0.00034412707,0.000009949775,0.000020100333],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99806255,0.0005385003,0.0009727858,0.00017289938,0.000040292616,0.00021299678],"domain_scores_gemma":[0.99866325,0.00032745476,0.00062510656,0.00011275685,0.00016513754,0.00010632642],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00058748235,0.00014437702,0.0005670106,0.00024868146,0.0001106395,0.0000046541545,0.0001874361,0.00015843514,0.0017547806],"category_scores_gemma":[0.00047591096,0.0001234585,0.00006446673,0.00021642007,0.00006535656,0.0000574975,0.0002201133,0.0004244426,9.588726e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009865037,0.00025750665,0.087569505,0.00004277774,0.0001713592,0.00023029426,0.00032215097,0.00002146435,0.907907,0.00005691864,0.002051538,0.00038295673],"study_design_scores_gemma":[0.02482736,0.0073535955,0.76817256,0.00070416473,0.00081324764,0.05697918,0.00095906976,0.00039144128,0.07891656,0.00017818475,0.059629217,0.0010754],"about_ca_topic_score_codex":0.097125955,"about_ca_topic_score_gemma":0.07995965,"teacher_disagreement_score":0.82899046,"about_ca_system_score_codex":0.00007839533,"about_ca_system_score_gemma":0.00080921774,"threshold_uncertainty_score":0.9991577},"labels":[],"label_agreement":null},{"id":"W4313454477","doi":"10.1021/acssynbio.2c00583","title":"A Universal Strategy to Promote Secretion of G+/G– Bacterial Extracellular Vesicles and Its Application in Host Innate Immune Responses","year":2023,"lang":"en","type":"article","venue":"ACS Synthetic Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Effector; Innate immune system; HEK 293 cells; Immune system; Biology; Cell biology; Bacteria; Extracellular vesicles; Secretion; Peptidoglycan; Probiotic; Extracellular; Microbiology; Biochemistry; Gene; Immunology","score_opus":0.015859508797887795,"score_gpt":0.25376402359722716,"score_spread":0.23790451479933936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313454477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99823844,0.00056200434,0.000042825846,0.00034032427,0.00030244247,0.00035769847,0.00006634827,0.000055329867,0.0000345634],"genre_scores_gemma":[0.99934775,0.00019728743,0.000012678543,0.0000047080885,0.00002275999,0.00003955488,0.00013827019,0.000010658482,0.00022634881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989718,0.00025028942,0.0002863529,0.0002598424,0.0000078007215,0.0002238949],"domain_scores_gemma":[0.9995585,0.000110764755,0.00009804491,0.00016409371,0.000052245145,0.00001634231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033899167,0.00011917958,0.0002439848,0.00027216293,0.00006461282,0.0000060452926,0.00010273702,0.00027007092,0.000104080296],"category_scores_gemma":[0.0001004245,0.000109524044,0.000026276704,0.00030729544,0.00008944968,0.000052120773,0.000091109876,0.00010619567,0.000120297096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041962758,0.000045116838,0.00055495964,0.000013441498,0.000025860621,7.961013e-7,0.00024075515,0.0000020211276,0.98627275,0.0037492646,0.000008958196,0.008666435],"study_design_scores_gemma":[0.0009815309,0.0007994204,0.049324736,0.000045335044,0.00002443414,0.00004092448,0.00024163567,0.000029102428,0.9353111,0.0005527249,0.01245286,0.00019620454],"about_ca_topic_score_codex":0.0002478001,"about_ca_topic_score_gemma":0.00006734974,"teacher_disagreement_score":0.050961673,"about_ca_system_score_codex":0.000016565538,"about_ca_system_score_gemma":0.000033341254,"threshold_uncertainty_score":0.4466261},"labels":[],"label_agreement":null},{"id":"W4313651895","doi":"10.15384/kjhp.2022.22.3.165","title":"Awareness, Knowledge, and Vaccination Status of Meningococcal Meningitis Vaccination: A Comparative Study on International and Korean University Students","year":2022,"lang":"en","type":"article","venue":"Daehan imsang geon-gang jeungjin hakoeji/Daehan imsang geon'gang jeungjin haghoeji","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; Medicine; Meningitis; Meningococcal meningitis; Meningococcal disease; Infectious disease (medical specialty); Family medicine; Pediatrics; Disease; Immunology; Neisseria meningitidis; Internal medicine","score_opus":0.023002643979746995,"score_gpt":0.3027741435268847,"score_spread":0.2797714995471377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313651895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99144626,0.0017407639,0.00007030459,0.0002409749,0.0023020054,0.001491367,0.0009725779,0.00023673808,0.0014990044],"genre_scores_gemma":[0.9945267,0.0001805434,0.00009818833,0.00003323847,0.00014506759,0.0001277315,0.0011866981,0.00007798776,0.0036238835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9956546,0.0010204578,0.0008751601,0.0012175846,0.00028980937,0.00094237673],"domain_scores_gemma":[0.9972871,0.0005852372,0.0007317988,0.00065590837,0.0005484619,0.00019148455],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010166456,0.00072123576,0.0010183419,0.0011383903,0.0014624591,0.00015985376,0.00078894634,0.00028337666,0.0016902726],"category_scores_gemma":[0.00012890491,0.0007860964,0.00017286802,0.0009164126,0.00018980207,0.00055490335,0.0012580553,0.0007949857,0.00006408484],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019888296,0.004847827,0.8712781,0.00016862007,0.002608829,0.00007578875,0.037982456,0.00013074862,0.05114036,0.002164126,0.01586108,0.011753247],"study_design_scores_gemma":[0.010240182,0.0026185198,0.9066582,0.00013233,0.0004909328,0.00019202256,0.031736396,0.0001927111,0.0076668393,0.00010224415,0.038786944,0.0011827222],"about_ca_topic_score_codex":0.0044377185,"about_ca_topic_score_gemma":0.00286391,"teacher_disagreement_score":0.04347352,"about_ca_system_score_codex":0.0007036276,"about_ca_system_score_gemma":0.00026813245,"threshold_uncertainty_score":0.9998375},"labels":[],"label_agreement":null},{"id":"W4317893216","doi":"10.14745/ccdr.v49i01a05","title":"Pertussis epidemiology in Canada, 2005–2019","year":2023,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Medicine; Bordetella pertussis; Epidemiology; Whooping cough; Incidence (geometry); Pediatrics; Case fatality rate; Vaccination; Population; Booster dose; Pertussis vaccine; Immunization; Demography; Immunology; Environmental health; Internal medicine","score_opus":0.028109464670026646,"score_gpt":0.26265075602163085,"score_spread":0.2345412913516042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317893216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856988,0.004420502,0.0000015282108,0.006042582,0.001779758,0.00018293216,0.00020741523,0.000067820416,0.0015986662],"genre_scores_gemma":[0.9884339,0.00053712295,0.000005838206,0.00059221446,0.000025469824,0.000058392572,0.0012146548,0.00001920061,0.009113218],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998024,0.00040875844,0.00060552015,0.0002777633,0.000026391985,0.0006575773],"domain_scores_gemma":[0.9980408,0.000502013,0.00016078021,0.0011014447,0.000059458907,0.00013551873],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00055402005,0.00017288257,0.0004536447,0.00009777674,0.00024150572,0.0000052641903,0.0003344242,0.00008759255,0.0009745964],"category_scores_gemma":[0.0007679571,0.00016216042,0.00006369457,0.00030931598,0.00005464011,0.00005279391,0.00021838081,0.00030788672,0.000047918395],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045738154,0.000030049861,0.4783456,0.000015835481,0.000084217805,0.0003981259,0.0000071051286,0.00022250746,0.00086885685,0.00016086458,0.51907396,0.00074711296],"study_design_scores_gemma":[0.00023636209,0.0000041255043,0.48476347,0.000020558156,0.000016965481,0.00010814052,0.00009363909,0.000036253663,0.000052280477,0.0000503092,0.51447374,0.00014415735],"about_ca_topic_score_codex":0.99977344,"about_ca_topic_score_gemma":0.99994165,"teacher_disagreement_score":0.009818202,"about_ca_system_score_codex":0.0008578889,"about_ca_system_score_gemma":0.010676091,"threshold_uncertainty_score":0.99993867},"labels":[],"label_agreement":null},{"id":"W4318478893","doi":"10.3390/vaccines11020275","title":"Development of an In Vitro Test Method to Replace an Animal-Based Potency Test for Pertactin Antigen in Multivalent Vaccines","year":2023,"lang":"en","type":"article","venue":"Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto; Western University; Sanofi (Canada)","funders":"Sanofi","keywords":"Antigenicity; Potency; Pertactin; Epitope; In vivo; In vitro; Diphtheria; Antigen; Monoclonal antibody; Antibody; Virology; In vitro toxicology; Medicine; Immunology; Biology; Vaccination; Biotechnology; Pertussis toxin; Biochemistry; Internal medicine; Receptor","score_opus":0.03186488002990921,"score_gpt":0.3280492793189821,"score_spread":0.29618439928907286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318478893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791723,0.0000683324,0.00024015972,0.00045644623,0.0003260555,0.0007574059,0.00008430354,0.00012885054,0.000021196032],"genre_scores_gemma":[0.9770155,0.000011018334,0.021876788,0.000048782935,0.00006491354,0.00024217447,0.0003006902,0.00004063307,0.00039951171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816746,0.00015186006,0.0006801623,0.00052693,0.00002316598,0.00045043594],"domain_scores_gemma":[0.99860126,0.00069327274,0.00014710083,0.00035424257,0.00015717857,0.00004696159],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008002947,0.00026195703,0.00048737132,0.00071560394,0.00013896047,0.0000183082,0.00023863536,0.00020566893,0.000110588946],"category_scores_gemma":[0.00069890625,0.00022966844,0.00006699578,0.00085245166,0.0000068462627,0.00018352522,0.00007114637,0.00013146646,0.000043160115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009531738,0.00075638597,0.06152285,0.000051543644,0.000018088705,0.0000018111728,0.0006704319,0.000061982406,0.9203449,0.0000051322595,0.00014627042,0.015467431],"study_design_scores_gemma":[0.0018242982,0.00045281305,0.41905147,0.000042879306,0.00000875806,0.000006894222,0.00042366365,0.00032596523,0.57093245,0.000011190986,0.0067116595,0.00020799982],"about_ca_topic_score_codex":0.0008155622,"about_ca_topic_score_gemma":0.0026395218,"teacher_disagreement_score":0.3575286,"about_ca_system_score_codex":0.000052709573,"about_ca_system_score_gemma":0.0001305472,"threshold_uncertainty_score":0.93656075},"labels":[],"label_agreement":null},{"id":"W4319870385","doi":"10.1016/j.vaccine.2022.12.071","title":"Evaluation of the effectiveness of maternal immunization against pertussis in Alberta using agent-based modeling: A Canadian immunization research network study","year":2023,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; Public Health Ontario; University of Toronto; University of Saskatchewan; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Immunization Research Network; World Health Organization","keywords":"Medicine; Quantile; Vaccination; Immunization; Pregnancy; Epidemiology; Pertussis vaccine; Population; Pediatrics; Obstetrics; Immunology; Internal medicine; Environmental health; Statistics; Antibody","score_opus":0.08060171577863898,"score_gpt":0.3445421329182546,"score_spread":0.2639404171396156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319870385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833,0.00012828241,0.00005766988,0.00004809247,0.0005192402,0.0008524276,0.0000068081285,0.000009960339,0.000047504713],"genre_scores_gemma":[0.9997784,0.000015192197,0.0000050721533,0.0000031316215,0.000020139489,0.000027257045,0.00011058153,0.000015991483,0.000024241861],"study_design_codex":"simulation_or_modeling","study_design_gemma":"observational","domain_scores_codex":[0.9959722,0.0031900317,0.0003405439,0.00015613159,0.00007456993,0.00026648646],"domain_scores_gemma":[0.9986159,0.0002282364,0.00008348891,0.00033489775,0.0007248819,0.0000125589295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0056830286,0.000094337614,0.00020419866,0.00045716963,0.00025785717,0.000010368769,0.00018092534,0.00011660186,0.000073990086],"category_scores_gemma":[0.00048109665,0.000073101226,0.00004168077,0.0017140919,0.000011869279,0.000065375694,0.0000824708,0.00015418523,0.000008261092],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015916937,0.0001136426,0.33833665,0.000024757675,0.000076058415,1.30933e-7,0.00023020357,0.50095254,0.15935235,0.00003347424,0.000010031983,0.0007109854],"study_design_scores_gemma":[0.0024633042,0.000111090536,0.7361564,0.00023490876,0.000082692786,0.0000012295255,0.0002356811,0.24521892,0.015323276,0.00007586744,0.0000166049,0.00008003602],"about_ca_topic_score_codex":0.33977467,"about_ca_topic_score_gemma":0.1833355,"teacher_disagreement_score":0.39781973,"about_ca_system_score_codex":0.0002020383,"about_ca_system_score_gemma":0.00038720947,"threshold_uncertainty_score":0.8315665},"labels":[],"label_agreement":null},{"id":"W4320712618","doi":"10.3389/fneur.2023.1088182","title":"Socioepidemiological macro-determinants associated with the cumulative incidence of bacterial meningitis: A focus on the African Meningitis Belt","year":2023,"lang":"en","type":"article","venue":"Frontiers in Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut Universitaire de Gériatrie de Montréal","funders":"American Academy of Neurology","keywords":"Incidence (geometry); Epidemiology; Demography; Medicine; Socioeconomic status; Cumulative incidence; Meningitis; Population; Disease burden; Public health; Environmental health; Geography; Pediatrics; Internal medicine; Cohort; Pathology","score_opus":0.02172390106136371,"score_gpt":0.25495590965322756,"score_spread":0.23323200859186385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320712618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930624,0.00008210712,0.00003995512,0.0045164563,0.001498556,0.00035395462,0.0000669837,0.00007357785,0.0003060104],"genre_scores_gemma":[0.9992613,0.000047086112,0.000013697324,0.00024922908,0.000051795087,0.000114144146,0.00003952792,0.00001801604,0.00020519416],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972642,0.001490046,0.00037192294,0.0003491982,0.00003221996,0.0004924258],"domain_scores_gemma":[0.997589,0.0017504113,0.00031504338,0.00027425727,0.000055633966,0.000015639405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008199642,0.00020812104,0.0005083629,0.0001443121,0.00028747824,0.000011074798,0.0003601998,0.0003258278,0.00013288388],"category_scores_gemma":[0.0007388455,0.000112092996,0.00008950849,0.00046441332,0.0006444372,0.000053359363,0.00015084504,0.00055805215,0.000025359908],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009644762,0.0006368568,0.5273352,0.000021875123,0.0015333648,0.00023377722,0.008621667,0.0004701149,0.17596443,0.0046152584,0.2564109,0.014511753],"study_design_scores_gemma":[0.004196525,0.0061567556,0.95060164,0.00009717189,0.00016053744,0.00015269543,0.0011499106,0.00044050414,0.014760783,0.0065963045,0.015079299,0.00060787733],"about_ca_topic_score_codex":0.0001704833,"about_ca_topic_score_gemma":0.00019363545,"teacher_disagreement_score":0.4232664,"about_ca_system_score_codex":0.000027633869,"about_ca_system_score_gemma":0.00003530111,"threshold_uncertainty_score":0.45710197},"labels":[],"label_agreement":null},{"id":"W4320712879","doi":"10.3389/fneur.2023.822575","title":"Bacterial meningitis in Africa","year":2023,"lang":"en","type":"review","venue":"Frontiers in Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; Frontiers Foundation; National Institutes of Health; Vetenskapsrådet; Karolinska Institutet; Magnus Bergvalls Stiftelse; Fundação de Amparo à Pesquisa do Estado de São Paulo; European Society of Clinical Microbiology and Infectious Diseases; Texas Alzheimer's Research and Care Consortium; University of Texas Health Science Center at Houston; Alzheimer's Association","keywords":"Bacterial meningitis; Meningitis; Medicine; Intensive care medicine; Microbiology; Biology; Pediatrics","score_opus":0.04042713593832629,"score_gpt":0.27883033230983867,"score_spread":0.2384031963715124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320712879","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00081997947,0.9744064,0.000007774926,0.000057215366,0.023431363,0.0005594009,0.00009214676,0.00011158131,0.0005140901],"genre_scores_gemma":[0.000040795538,0.9977173,0.000026962725,0.000013957246,0.00019515479,0.0002640724,0.00034030815,0.00007161925,0.0013298014],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971455,0.0008211774,0.000774917,0.00059311744,0.000010918906,0.0006543774],"domain_scores_gemma":[0.999217,0.00019226983,0.00022060545,0.00033875712,0.0000134334305,0.000017964916],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.000270719,0.00038478707,0.0019256508,0.0010966576,0.00005404632,0.00001627367,0.00035318322,0.001304225,0.00036714747],"category_scores_gemma":[0.000117837524,0.00035518722,0.00024016314,0.00067986926,0.0001080722,0.00005451555,0.00018768963,0.0010345177,0.00058096554],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002445325,0.00020002337,0.0006325867,0.0022393533,0.00037758553,0.00019854809,0.00017296786,0.0000015425107,0.00013047822,0.0001840773,0.1483392,0.84727913],"study_design_scores_gemma":[0.0006227776,0.00016386586,0.00012372612,0.00048353852,0.00008804231,0.00013902273,0.0000046904834,4.127759e-7,0.0000019015744,0.00013240185,0.9979817,0.00025787056],"about_ca_topic_score_codex":0.000117941076,"about_ca_topic_score_gemma":0.00014934118,"teacher_disagreement_score":0.8496426,"about_ca_system_score_codex":0.000053527758,"about_ca_system_score_gemma":0.000112903,"threshold_uncertainty_score":0.9999923},"labels":[],"label_agreement":null},{"id":"W4322761060","doi":"10.1016/j.ijantimicag.2023.106770","title":"Daptomycin for the treatment of acute bacterial meningitis: A narrative review","year":2023,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Daptomycin; Medicine; Meningitis; Dosing; Intensive care medicine; Regimen; Bacterial meningitis; Internal medicine; Surgery; Vancomycin; Bacteria; Staphylococcus aureus; Biology","score_opus":0.07147264469099962,"score_gpt":0.38997001724875,"score_spread":0.3184973725577504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322761060","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00097247236,0.98087996,0.00004386375,0.00040781967,0.015079278,0.0010003011,0.0015874251,0.0000131699935,0.00001570301],"genre_scores_gemma":[0.000053509924,0.9972266,0.000043566524,0.000036731508,0.0008357032,0.00004598992,0.00056378974,0.00003529295,0.0011588406],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980831,0.00017920784,0.001325606,0.00017974258,0.000048180358,0.00018416556],"domain_scores_gemma":[0.9970117,0.00034696452,0.0018537135,0.0001636192,0.00060490886,0.000019054194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026471342,0.00031539472,0.0014836272,0.00023888324,0.000108337335,0.000039098883,0.0006225402,0.00021641295,0.00047474544],"category_scores_gemma":[0.00006342082,0.00018054688,0.0013760387,0.00014260887,0.00007848312,0.000097832184,0.000062672116,0.0001700048,0.00006798862],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000753597,0.0010410269,0.000004198871,0.0048376233,0.053914387,0.000044972858,0.0008419539,0.0000014291284,0.007838464,0.00007518623,0.24407439,0.6865728],"study_design_scores_gemma":[0.0012066927,0.00046413203,0.000005020196,0.018802512,0.0037561252,0.00075443415,0.000013151543,1.15139976e-7,0.00058041763,0.0000048306456,0.974271,0.00014154094],"about_ca_topic_score_codex":0.000033521414,"about_ca_topic_score_gemma":0.000006749877,"teacher_disagreement_score":0.73019665,"about_ca_system_score_codex":0.00014343741,"about_ca_system_score_gemma":0.00026134262,"threshold_uncertainty_score":0.7362488},"labels":[],"label_agreement":null},{"id":"W4323519500","doi":"10.2139/ssrn.4359174","title":"Primary Meningococcal Conjunctivitis in an Adult Patient","year":2023,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Primary (astronomy); Medicine; Primary care; Meningococcal meningitis; Neisseria meningitidis; Family medicine; Physics; Biology","score_opus":0.007209881411992468,"score_gpt":0.23060535662013387,"score_spread":0.2233954752081414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323519500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977674,0.00044884285,0.000054616452,0.00039326077,0.0008537842,0.00009341817,0.000004698045,0.00007295604,0.00031105833],"genre_scores_gemma":[0.99818265,0.00083649287,0.0000037358097,0.00006637945,0.00008955957,0.000014631101,0.00005581644,0.000015056551,0.00073568046],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980484,0.00016943373,0.00023966127,0.00016055076,0.000016180811,0.0013657432],"domain_scores_gemma":[0.99969685,0.000034939854,0.00007844183,0.00010854726,0.00006108868,0.000020136702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046312565,0.000113778704,0.00017286811,0.00020665742,0.00017628865,0.00002356954,0.00010548266,0.00013108013,0.00013917439],"category_scores_gemma":[0.000030600957,0.00009780215,0.000059965943,0.00025153466,0.00003117263,0.0001903693,0.000036763082,0.0011456085,0.00022820302],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049789017,0.00039073642,0.044634536,0.000008145392,0.00026119675,0.000011305935,0.0007501083,0.000028996861,0.7373305,0.048714,0.0013246072,0.16604795],"study_design_scores_gemma":[0.024578044,0.018117841,0.5791578,0.00023815501,0.00022186602,0.012030345,0.01691241,0.0000897703,0.042534757,0.16425289,0.13920024,0.0026658261],"about_ca_topic_score_codex":0.00016560889,"about_ca_topic_score_gemma":0.002156066,"teacher_disagreement_score":0.6947958,"about_ca_system_score_codex":0.00031405003,"about_ca_system_score_gemma":0.0004667389,"threshold_uncertainty_score":0.49771625},"labels":[],"label_agreement":null},{"id":"W4361268334","doi":"10.1016/j.idcr.2023.e01749","title":"Primary meningococcal conjunctivitis in an adult patient","year":2023,"lang":"en","type":"article","venue":"IDCases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Neisseria meningitidis; Bacterial Conjunctivitis; Dermatology; Meningococcal disease; Systemic antibiotics; Antibiotics; Antimicrobial; Primary care; Intensive care medicine; Microbiology","score_opus":0.016265253786752015,"score_gpt":0.2518615359283935,"score_spread":0.2355962821416415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361268334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99794203,0.000096253214,0.0000023801808,0.00015114587,0.0008405809,0.00010285864,0.00003687185,0.00014857776,0.000679299],"genre_scores_gemma":[0.99931353,0.000021298549,0.000007737177,0.00010746277,0.000035136592,0.000044730263,0.0002065822,0.000008413443,0.00025512444],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994404,0.00007994429,0.00013656258,0.00015255042,0.0000067230944,0.00018385876],"domain_scores_gemma":[0.99974,0.000068335736,0.000028547753,0.000119148965,0.00003226936,0.00001167292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004656663,0.00007771763,0.00012713266,0.000113698814,0.00007485271,0.000012284037,0.000043361753,0.00008797165,0.0004063174],"category_scores_gemma":[0.00003715084,0.000068312744,0.000028535815,0.00017880066,0.0000335637,0.00010599405,0.000042077718,0.000086197346,0.0004487672],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013956211,0.00022429883,0.06006458,0.0000113877,0.00002654736,0.000024239105,0.00042231122,0.000007024141,0.89349765,0.0007227454,0.007700255,0.037159435],"study_design_scores_gemma":[0.0020432246,0.0010806409,0.8214766,0.000048312733,0.00001790636,0.00015693466,0.0005570665,0.000010088926,0.081457675,0.0002226788,0.092591666,0.00033723202],"about_ca_topic_score_codex":0.00037821993,"about_ca_topic_score_gemma":0.0003721952,"teacher_disagreement_score":0.8120399,"about_ca_system_score_codex":0.000017738148,"about_ca_system_score_gemma":0.000017610855,"threshold_uncertainty_score":0.5768144},"labels":[],"label_agreement":null},{"id":"W4362560909","doi":"10.1016/j.tim.2023.03.012","title":"Bordetella pertussis","year":2023,"lang":"en","type":"article","venue":"Trends in Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Alexandria University; Michael Smith Health Research BC","keywords":"Bordetella pertussis; Whooping cough; Incidence (geometry); Immunology; Pertussis vaccine; Immunity; Pediatrics; Medicine; Disease; Biology; Bordetella; Vaccination; Immune system; Internal medicine; Immunization; Bacteria","score_opus":0.02228244924869813,"score_gpt":0.2841165298725297,"score_spread":0.26183408062383157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362560909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992038,0.00041900083,0.0000028865034,0.000824446,0.0019535443,0.000047777296,0.000059824477,0.00024014572,0.004414343],"genre_scores_gemma":[0.98055744,0.00012438661,0.000020459525,0.00008985146,0.00005320534,0.000022272743,0.0007098751,0.000016015067,0.018406512],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988614,0.00014652127,0.00025163495,0.00029482343,0.0000028125967,0.00044282695],"domain_scores_gemma":[0.99960685,0.000088563764,0.000045987013,0.00022655481,0.000020689486,0.000011332712],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001758263,0.00014957401,0.00027015284,0.00064760586,0.000095168136,0.0000074945056,0.00015979818,0.00031109544,0.0049934187],"category_scores_gemma":[0.000026880394,0.00012690909,0.000083605,0.0008117029,0.00010845456,0.00003585451,0.000096391195,0.00020647554,0.004002556],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037332593,0.000046275578,0.0059545166,0.0000025328711,0.00003629028,0.0000032337007,0.00012046148,0.0000040834348,0.9199361,0.00028907915,0.041043013,0.032527044],"study_design_scores_gemma":[0.0014533311,0.00016313248,0.06367254,0.000011898478,0.000015545633,0.00021132165,0.00010237784,0.0000033250485,0.055005863,0.00012608187,0.8789503,0.00028426596],"about_ca_topic_score_codex":0.00015069076,"about_ca_topic_score_gemma":0.00029612114,"teacher_disagreement_score":0.8649303,"about_ca_system_score_codex":0.000026252348,"about_ca_system_score_gemma":0.000013097445,"threshold_uncertainty_score":0.99677294},"labels":[],"label_agreement":null},{"id":"W4364378244","doi":"10.1016/j.bjae.2023.02.003","title":"Commonly encountered central nervous system infections in the intensive care unit","year":2023,"lang":"en","type":"review","venue":"BJA Education","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Ventriculitis; Intensive care medicine; Lumbar puncture; Meningitis; Intensive care unit; Neuroimaging; Antibiotics; Central nervous system; Pediatrics; Internal medicine; Cerebrospinal fluid","score_opus":0.06665313347836312,"score_gpt":0.3538057644183482,"score_spread":0.2871526309399851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364378244","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006086999,0.98138386,0.0000016639797,0.00009257114,0.01061496,0.0010428386,0.00014422776,0.00011709848,0.00051578187],"genre_scores_gemma":[0.01000628,0.98517025,9.154662e-7,0.00004528077,0.0004226276,0.0009102603,0.0025536837,0.00003685143,0.00085383723],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99850607,0.00056257827,0.00043421966,0.00023357973,0.000013370959,0.00025017068],"domain_scores_gemma":[0.99889463,0.00020261791,0.00023709002,0.00035468148,0.0002981783,0.000012778712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121460354,0.00024290277,0.0005823677,0.0003038489,0.00022861619,0.000054078817,0.0002434187,0.00039429037,0.00007590612],"category_scores_gemma":[0.000086411004,0.00016594856,0.00020607236,0.0005158443,0.000037007856,0.000058914036,0.00004513855,0.0004757743,0.00063840504],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000071617706,0.0002087495,0.0007124021,0.008728977,0.00031817888,0.0000012668233,0.0044582607,0.0000012478695,0.000022400489,0.0019881355,0.017442944,0.9661103],"study_design_scores_gemma":[0.000104374776,0.000039010236,0.0016393331,0.0056682243,0.00037662982,0.00022995514,0.01567527,8.213875e-8,0.0000012686563,0.000004673684,0.9760989,0.00016226445],"about_ca_topic_score_codex":0.0029573021,"about_ca_topic_score_gemma":0.0016615305,"teacher_disagreement_score":0.965948,"about_ca_system_score_codex":0.00022161163,"about_ca_system_score_gemma":0.000660328,"threshold_uncertainty_score":0.8205618},"labels":[],"label_agreement":null},{"id":"W4367311264","doi":"10.1001/jamanetworkopen.2023.10687","title":"Vaccine-Preventable Infections Among Solid Organ Transplant Recipients in Switzerland","year":2023,"lang":"en","type":"article","venue":"JAMA Network Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Solid organ; Medicine; Intensive care medicine; Organ transplantation; Immunology; Transplantation; Internal medicine","score_opus":0.01667403522312168,"score_gpt":0.27639768138319265,"score_spread":0.259723646160071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367311264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934767,0.00010856884,0.000027412167,0.0004649765,0.002698322,0.0005250413,0.000028548442,0.0001237237,0.0025467211],"genre_scores_gemma":[0.9899234,0.00035665932,0.000011842277,0.00006448417,0.0002173097,0.00013157187,0.00039966017,0.000024396286,0.008870665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998607,0.00023060993,0.00036122103,0.00029619742,0.00001360694,0.0004913652],"domain_scores_gemma":[0.99947083,0.0001038198,0.00009092614,0.00026871322,0.00003518728,0.00003051882],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00061140064,0.00016213102,0.00031787952,0.00014261325,0.00032715508,0.000119902215,0.00032846341,0.0002574376,0.0016918308],"category_scores_gemma":[0.000031207637,0.00014446289,0.00005926528,0.0009210314,0.000019671617,0.00037521936,0.0002244244,0.00032041443,0.0010102491],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016542799,0.0001422954,0.92070854,0.0000055788,0.00011612877,0.0000056966924,0.00023747842,0.00051376,0.008455716,0.00012396627,0.06743501,0.0020903961],"study_design_scores_gemma":[0.002326907,0.00012526324,0.93817794,0.00018232464,0.000029076467,0.000033195814,0.000043721226,0.00003810095,0.0012079405,0.00032174567,0.057314087,0.00019972502],"about_ca_topic_score_codex":0.0025578316,"about_ca_topic_score_gemma":0.007391629,"teacher_disagreement_score":0.017469367,"about_ca_system_score_codex":0.000037044745,"about_ca_system_score_gemma":0.000036115816,"threshold_uncertainty_score":0.9997676},"labels":[],"label_agreement":null},{"id":"W4368348217","doi":"10.1016/j.biologicals.2023.101683","title":"Development of a droplet digital PCR for pertussis toxin locus copy number determination in a genetically-modified Bordetella pertussis strain","year":2023,"lang":"en","type":"article","venue":"Biologicals","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur","keywords":"Locus (genetics); Bordetella pertussis; Pertussis toxin; Biology; Gene; Strain (injury); Digital polymerase chain reaction; Genetics; Polymerase chain reaction; Bacteria; Receptor; G protein","score_opus":0.04153103462502097,"score_gpt":0.30193191874022673,"score_spread":0.2604008841152058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4368348217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99769455,0.00006180537,0.00078928075,0.00017180933,0.00022356745,0.00038762498,0.00022206597,0.00007514254,0.00037416857],"genre_scores_gemma":[0.9977681,0.000051807543,0.0009994264,0.00003165589,0.00002762363,0.00016887981,0.00041555837,0.000010446456,0.0005265273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987891,0.00007934693,0.00048727248,0.00029861953,0.000016936492,0.00032878137],"domain_scores_gemma":[0.9993606,0.00031395,0.0001026017,0.00012728131,0.00007247174,0.000023046414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002800307,0.0001629239,0.0003350969,0.00011054921,0.00009949514,0.000022907761,0.00013177835,0.00033435787,0.00048149808],"category_scores_gemma":[0.0002754472,0.000115573326,0.00010089327,0.00023931041,0.00008986889,0.000045179055,0.00007940292,0.00007790183,0.0001608573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017849985,0.00019540152,0.0053312825,0.000021418544,0.000046164987,9.89327e-7,0.00024987216,0.0000018208359,0.8470121,0.00029515644,0.0002848536,0.14638244],"study_design_scores_gemma":[0.0069938344,0.001407567,0.27796838,0.00017647284,0.00007225044,0.00006722788,0.0011007042,0.00031882088,0.4783058,0.0020759662,0.23012422,0.0013887611],"about_ca_topic_score_codex":0.0000108701915,"about_ca_topic_score_gemma":0.0000312615,"teacher_disagreement_score":0.36870632,"about_ca_system_score_codex":0.00003291454,"about_ca_system_score_gemma":0.00005211476,"threshold_uncertainty_score":0.5272066},"labels":[],"label_agreement":null},{"id":"W4368361987","doi":"10.1128/spectrum.00361-23","title":"A Refined, Controlled 16S rRNA Gene Sequencing Approach Reveals Limited Detection of Cerebrospinal Fluid Microbiota in Children with Bacterial Meningitis","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Center for Advancing Translational Sciences; National Institutes of Health; National Institute of Neurological Disorders and Stroke; Children’s Hospital of Wisconsin Research Institute; University of Washington; Children's Hospital Los Angeles; University of Southern California; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Seattle Children's Research Institute; Cystic Fibrosis Foundation","keywords":"16S ribosomal RNA; Amplicon; Biology; Cerebrospinal fluid; Bacterial meningitis; Amplicon sequencing; Microbiology; Microbiome; Gene; Computational biology; Ribosomal RNA; Polymerase chain reaction; Genetics","score_opus":0.010199416924062642,"score_gpt":0.20590700911607707,"score_spread":0.19570759219201442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4368361987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970744,0.00034984964,0.00010817534,0.00015259383,0.0007829754,0.0009213601,0.00026448,0.0002079003,0.00013823742],"genre_scores_gemma":[0.99723977,0.00009498803,0.00019786006,0.000034260105,0.0001504563,0.000096623764,0.0015105347,0.000048004113,0.00062750373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972927,0.00042421243,0.0008037308,0.0006827083,0.000015161466,0.0007814703],"domain_scores_gemma":[0.998996,0.00008366799,0.00038475642,0.00042609905,0.00007859673,0.000030844883],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004898042,0.00041564775,0.0010527723,0.0006757247,0.00022390074,0.000026049824,0.00027003026,0.0006016822,0.00028755996],"category_scores_gemma":[0.00005705428,0.00034320494,0.00018750694,0.0008672432,0.00026400096,0.000104923805,0.00013640708,0.00042618564,0.00015521386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027663705,0.0001193458,0.011169767,0.000017029308,0.00055704574,0.0000027542496,0.0000981318,0.000026955226,0.9847475,0.000055094057,0.00029606462,0.00014391508],"study_design_scores_gemma":[0.0133422045,0.0012674867,0.070259064,0.000058825088,0.00013540793,0.0022072662,0.00007202112,0.000009407386,0.9112452,0.000032036678,0.00091671955,0.00045434866],"about_ca_topic_score_codex":0.0007910957,"about_ca_topic_score_gemma":0.00038323467,"teacher_disagreement_score":0.07350231,"about_ca_system_score_codex":0.00016878177,"about_ca_system_score_gemma":0.000099712895,"threshold_uncertainty_score":0.999902},"labels":[],"label_agreement":null},{"id":"W4375853498","doi":"10.1101/2023.05.06.23289604","title":"Association of Seizure with COVID-19 Vaccines in Persons with Epilepsy: A Systematic Review and Meta-analysis","year":2023,"lang":"en","type":"review","venue":"medRxiv","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meta-analysis; Medicine; Vaccination; Epilepsy; Immunization; Incidence (geometry); Internal medicine; Virology; Immunology; Psychiatry; Antibody","score_opus":0.0710661687809298,"score_gpt":0.33375386184734285,"score_spread":0.26268769306641304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375853498","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012168715,0.9974397,0.000014256641,0.00040237966,0.0000407927,0.0016807364,0.0002398575,0.00004639,0.000014211038],"genre_scores_gemma":[0.00010961968,0.9943168,0.000011376354,0.000079509016,0.000007626397,0.0007508806,0.000208936,0.000032352535,0.0044829],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9972915,0.0011875688,0.0008745925,0.00039638465,0.00003527474,0.0002146998],"domain_scores_gemma":[0.99742836,0.00076032674,0.001244133,0.00043122048,0.00010384786,0.000032096057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001257413,0.00038063058,0.0072015557,0.00053402263,0.00007694183,0.000016083613,0.00016108614,0.00033536874,0.0004531152],"category_scores_gemma":[0.00050491164,0.00019447399,0.00075215095,0.0018139402,0.00002820925,0.000051217623,0.000042904852,0.00029223558,0.00003948645],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007274606,0.00004521827,0.0018022279,0.7594614,0.2380453,0.0000044956287,0.000074905714,7.6956513e-7,0.0000017294998,0.000025348536,0.0004964395,0.000034862867],"study_design_scores_gemma":[0.00024138583,0.000087821725,0.00010079308,0.015855916,0.92666936,0.00008711362,0.00003501807,1.01182806e-7,4.613554e-7,0.0000019920656,0.05667236,0.00024769513],"about_ca_topic_score_codex":0.0002818837,"about_ca_topic_score_gemma":0.0020373033,"teacher_disagreement_score":0.7436055,"about_ca_system_score_codex":0.00008675193,"about_ca_system_score_gemma":0.00015982457,"threshold_uncertainty_score":0.79304194},"labels":[],"label_agreement":null},{"id":"W4376880975","doi":"10.1016/j.sapharm.2023.04.046","title":"Identifying vaccination deserts: The availability and distribution of pharmacists with authorization to administer injections in Ontario Canada","year":2023,"lang":"en","type":"article","venue":"Research in Social and Administrative Pharmacy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Laurentian University; University of Waterloo","funders":"","keywords":"Humanities; Medicine; Authorization; Art","score_opus":0.23701923464362376,"score_gpt":0.4531857528041352,"score_spread":0.21616651816051144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376880975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975972,0.00003564255,0.000023795365,0.0015287874,0.00011992481,0.00038980634,0.000082824474,0.0000088723755,0.00021315027],"genre_scores_gemma":[0.9993944,0.00003173345,0.0000026825653,0.000010443212,0.000022485032,0.00008809209,0.00010824125,0.000003445847,0.00033843957],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99896306,0.00037402596,0.0002032715,0.00019139345,0.0000490995,0.0002191277],"domain_scores_gemma":[0.99954724,0.00019313881,0.000042238735,0.000047617323,0.00014268265,0.000027085562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068605074,0.000077821984,0.00012475355,0.00008358073,0.00037666492,0.000031538726,0.00005818926,0.00003728272,0.00011002321],"category_scores_gemma":[0.00007497564,0.000058939924,0.000011025411,0.00080837304,0.000097477656,0.00012287308,0.00006551136,0.0002876166,0.0000024890383],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010891748,0.0002335759,0.9369384,0.0001028912,0.00007124376,0.0000128282145,0.006260437,0.000004265455,0.037089985,0.0037051952,0.00228813,0.012203875],"study_design_scores_gemma":[0.0010029761,0.00012187664,0.98381126,0.000025047357,0.000007321047,0.000014305487,0.0015242355,0.000010739199,0.00757439,0.00049710396,0.0053308974,0.000079832564],"about_ca_topic_score_codex":0.45994344,"about_ca_topic_score_gemma":0.913843,"teacher_disagreement_score":0.4538995,"about_ca_system_score_codex":0.00026241754,"about_ca_system_score_gemma":0.00065360597,"threshold_uncertainty_score":0.54365283},"labels":[],"label_agreement":null},{"id":"W4377030824","doi":"10.1016/j.pharmthera.2023.108443","title":"Bacterial extracellular vesicles and their interplay with the immune system","year":2023,"lang":"en","type":"review","venue":"Pharmacology & Therapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Arthritis Society","keywords":"Extracellular vesicles; Immune system; Extracellular; Extracellular vesicle; Bacteria; Cell biology; Biology; Vesicle; Microvesicles; Microbiology; Immunology; Biochemistry; Genetics; Gene","score_opus":0.049985165018579435,"score_gpt":0.327771108224436,"score_spread":0.2777859432058566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377030824","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036596397,0.99031705,0.0000270814,0.00021658913,0.004420736,0.00093901204,0.00013331907,0.00024710683,0.00003945993],"genre_scores_gemma":[0.0028725427,0.9949996,0.0000036411845,0.00006781861,0.00044461773,0.00029463053,0.00018396234,0.00010938242,0.0010238088],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976969,0.0008944779,0.0005291696,0.00041825496,0.000014082001,0.00044711516],"domain_scores_gemma":[0.9985538,0.00061946025,0.00040896866,0.0003341087,0.000060244478,0.000023413784],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039743033,0.0005710021,0.0013419312,0.00014303914,0.00043535724,0.000060231618,0.00042396173,0.00057051884,0.00027693788],"category_scores_gemma":[0.000001362053,0.00028592735,0.00024386842,0.00023516879,0.00037540033,0.00005606208,0.00019807415,0.00078250945,0.00036158194],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004072379,0.00020190032,0.000004068682,0.0056249984,0.0171595,0.000018205892,0.00083088083,4.81268e-7,0.19516584,0.000607975,0.0017380608,0.77824086],"study_design_scores_gemma":[0.0006708443,0.00018617584,0.0000043671444,0.0009025018,0.003762826,0.0005948901,0.00020430099,0.0000015433953,0.003370395,0.0000031051577,0.98998326,0.00031578328],"about_ca_topic_score_codex":0.0000247093,"about_ca_topic_score_gemma":0.000011528401,"teacher_disagreement_score":0.9882452,"about_ca_system_score_codex":0.000062775056,"about_ca_system_score_gemma":0.00012111169,"threshold_uncertainty_score":0.9999593},"labels":[],"label_agreement":null},{"id":"W4377043095","doi":"10.3390/biology12050730","title":"Reduction in mRNA Expression of the Neutrophil Chemoattract Factor CXCL1 in Pseudomonas aeruginosa Treated Barth Syndrome B Lymphoblasts","year":2023,"lang":"en","type":"article","venue":"Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Lymphoblast; Pseudomonas aeruginosa; Microbiology; CXCL1; Messenger RNA; Immunology; Molecular biology; Genetics; Gene; Inflammation; Cell culture; Bacteria; Chemokine","score_opus":0.017955077938665978,"score_gpt":0.2487949333752285,"score_spread":0.23083985543656255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377043095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99789536,0.0001542906,5.9852016e-7,0.00023048717,0.0013324626,0.00020896165,0.0000411009,0.000053860538,0.00008287277],"genre_scores_gemma":[0.999404,0.00013226524,0.0000032391695,0.000008927928,0.00003004658,0.000030893934,0.00008273859,0.000010120331,0.00029772925],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988651,0.00026862026,0.0003280895,0.00025101568,0.000008992751,0.00027813474],"domain_scores_gemma":[0.9995392,0.0000705499,0.000118806354,0.00023719759,0.000023320732,0.000010902413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011421347,0.00014032633,0.000289613,0.00024686067,0.000066974935,0.0000034119164,0.00014554571,0.0003578876,0.0002447574],"category_scores_gemma":[0.00004676076,0.000094809446,0.00007492705,0.00051486597,0.000114882285,0.000055621822,0.000085515996,0.00017522709,0.0001028633],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009703737,0.000088109904,0.091239765,0.000007009317,0.000011952414,0.0000018037949,0.000104712824,0.000008762955,0.9074296,0.00005263349,0.00017597711,0.0007826529],"study_design_scores_gemma":[0.00091689767,0.0001078362,0.62406355,0.000036897072,0.0000039874976,0.00011076515,0.00004025728,0.0000015031877,0.37303475,0.00006790902,0.0015361601,0.000079460326],"about_ca_topic_score_codex":0.0007519806,"about_ca_topic_score_gemma":0.0001236902,"teacher_disagreement_score":0.5343948,"about_ca_system_score_codex":0.000050204635,"about_ca_system_score_gemma":0.000036967835,"threshold_uncertainty_score":0.3866217},"labels":[],"label_agreement":null},{"id":"W4377098254","doi":"10.1186/s12866-023-02885-y","title":"Vaginal carriage of Haemophilus influenzae in a non-pregnant reproductive-age population","year":2023,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NYU Grossman School of Medicine; York University","keywords":"Carriage; Bacterial vaginosis; Biology; Haemophilus influenzae; Haemophilus; Cohort; Population; Obstetrics; Internal medicine; Medicine; Microbiology; Genetics; Bacteria; Pathology; Antibiotics","score_opus":0.023689443403118595,"score_gpt":0.27405766006525867,"score_spread":0.2503682166621401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377098254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99736935,0.0003737748,0.000026967053,0.00006625007,0.0015360948,0.00032071737,0.00008614725,0.00008610409,0.00013456916],"genre_scores_gemma":[0.9982694,0.000040847375,0.0000782636,0.000020749114,0.00007631613,0.000034839704,0.00064850773,0.00001700585,0.0008141073],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984769,0.00024588397,0.0004699262,0.000435681,0.000006164582,0.0003654105],"domain_scores_gemma":[0.99926955,0.00009542604,0.00016518646,0.0003981055,0.000059632323,0.0000121206585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003546042,0.0001752256,0.0004294595,0.0004021466,0.000078167286,0.0000055641663,0.00016316967,0.00031865315,0.0001966729],"category_scores_gemma":[0.00013030547,0.00015699166,0.00009254012,0.00048723305,0.00012492854,0.000072746785,0.00013426658,0.00019891687,0.000329505],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014558276,0.00006692198,0.089119166,0.000037042526,0.000038572616,0.000004060432,0.00023843592,0.000049871534,0.9087296,0.0002557417,0.0008776706,0.00043730525],"study_design_scores_gemma":[0.0021501859,0.00027217768,0.84050155,0.00010283419,0.00003170569,0.00020877687,0.00013096174,0.0000044319377,0.14466736,0.00043160593,0.011212707,0.00028569042],"about_ca_topic_score_codex":0.0016465762,"about_ca_topic_score_gemma":0.0010058706,"teacher_disagreement_score":0.7640623,"about_ca_system_score_codex":0.000040269242,"about_ca_system_score_gemma":0.0000377276,"threshold_uncertainty_score":0.6401934},"labels":[],"label_agreement":null},{"id":"W4377139575","doi":"10.1186/s12951-023-01928-w","title":"Detoxified synthetic bacterial membrane vesicles as a vaccine platform against bacteria and SARS-CoV-2","year":2023,"lang":"en","type":"article","venue":"Journal of Nanobiotechnology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"Sahlgrenska Akademin; Göteborgs Universitet; Vetenskapsrådet; Hjärt-Lungfonden","keywords":"Microbiology; Pseudomonas aeruginosa; Immunization; Immune system; Bacterial outer membrane; Immunity; Vesicle; Escherichia coli; Biology; Bacteria; Bacterial cell structure; Antigen; Virology; Immunology; Membrane; Biochemistry","score_opus":0.01867813429684724,"score_gpt":0.2572764922412134,"score_spread":0.23859835794436618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377139575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938508,0.0003736199,0.000013243338,0.0024532573,0.0028674868,0.00015149458,0.000020467,0.00018409273,0.000085540705],"genre_scores_gemma":[0.9980254,0.0014024993,0.000091621856,0.000084629566,0.00018109247,0.0000058935802,0.000023397664,0.000031155265,0.0001542962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848974,0.00008668232,0.00071008806,0.0002505793,0.000027158801,0.00043576703],"domain_scores_gemma":[0.9989546,0.00014094001,0.00046762577,0.00028310556,0.00012543227,0.00002828067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040828856,0.0002564635,0.00064056413,0.0007494144,0.00019902653,0.000042669224,0.0003025119,0.0006982562,0.00023873198],"category_scores_gemma":[0.00022467936,0.00020592062,0.00014316502,0.00039742756,0.00014786041,0.00022351058,0.00017954262,0.00053594395,0.0004163043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000554931,0.0000605993,0.00009474745,0.000020186262,0.00023235701,0.00003378116,0.0000727504,5.6174804e-7,0.98015064,0.00055578863,0.0014789865,0.016744653],"study_design_scores_gemma":[0.0023236116,0.0006204016,0.0014447544,0.000064670225,0.00007293185,0.0024446142,0.00012244229,0.0000031381644,0.8950173,0.0004973641,0.09719331,0.00019541717],"about_ca_topic_score_codex":0.000031858675,"about_ca_topic_score_gemma":0.000028429387,"teacher_disagreement_score":0.09571432,"about_ca_system_score_codex":0.00004281839,"about_ca_system_score_gemma":0.0000798977,"threshold_uncertainty_score":0.8397199},"labels":[],"label_agreement":null},{"id":"W4377940626","doi":"10.1128/spectrum.01233-23","title":"Insight on Bacterial Newborn Meningitis Using a Neurovascular-Unit-on-a-Chip","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tel Aviv University; Azrieli Foundation; Israel Science Foundation","keywords":"Neurovascular bundle; Multicellular organism; Meningitis; Unit (ring theory); Bacterial meningitis; Neuroscience; Biology; Medicine; Pathology; Pediatrics; Psychology; Genetics","score_opus":0.0262025791489436,"score_gpt":0.2500017534447547,"score_spread":0.22379917429581112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377940626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898178,0.0000794544,0.000024084715,0.00088595646,0.006824334,0.00029023385,0.00016477755,0.00045045116,0.0014629107],"genre_scores_gemma":[0.9962884,0.000065349646,0.0000417625,0.00035670475,0.0004949813,0.000022352084,0.0008589942,0.000063010484,0.001808402],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977818,0.00038972782,0.00037976514,0.0006417349,0.0000130247145,0.0007939625],"domain_scores_gemma":[0.99907225,0.00017279625,0.00013129218,0.0005512702,0.00003355167,0.00003881128],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019744624,0.00038719704,0.00049168814,0.0004984825,0.00051117386,0.00004422345,0.0002831329,0.0004997353,0.0022794092],"category_scores_gemma":[0.00006674697,0.0003395687,0.000234586,0.0005310839,0.0001869605,0.00007248745,0.00016130204,0.00050379283,0.005503087],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029503452,0.000112978276,0.0008029277,0.000005640247,0.00019600979,0.000018941324,0.00009686332,0.000032624834,0.9912287,0.00077691686,0.005496705,0.00093664427],"study_design_scores_gemma":[0.0021952728,0.0009386377,0.009760715,0.000040727213,0.000062652856,0.00057539414,0.00003087933,0.000006782468,0.46499082,0.00018008887,0.52077705,0.00044098034],"about_ca_topic_score_codex":0.00021053174,"about_ca_topic_score_gemma":0.00012081553,"teacher_disagreement_score":0.5262379,"about_ca_system_score_codex":0.00005535753,"about_ca_system_score_gemma":0.00005037786,"threshold_uncertainty_score":0.99990565},"labels":[],"label_agreement":null},{"id":"W4379259603","doi":"10.1038/s41522-023-00400-9","title":"Extracellular vesicles of the Gram-positive gut symbiont Bifidobacterium longum induce immune-modulatory, anti-inflammatory effects","year":2023,"lang":"en","type":"article","venue":"npj Biofilms and Microbiomes","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Technion-Israel Institute of Technology; European Commission; Japan Society for the Promotion of Science; University of Michigan; Seerave Foundation; Canadian Institute for Advanced Research; Israel Cancer Research Fund","keywords":"Immune system; Extracellular vesicles; Bifidobacterium longum; Bifidobacterium; Microbiology; Inflammation; Biology; Extracellular; Gut flora; Gram; Immunology; Bacteria; Cell biology; Lactobacillus","score_opus":0.006479373345269963,"score_gpt":0.21125963070514248,"score_spread":0.20478025735987251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379259603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912901,0.005166507,0.0000028242584,0.00022384501,0.00254973,0.00043914941,0.00012774226,0.00012508658,0.00007501812],"genre_scores_gemma":[0.99729127,0.00031614542,0.000014462451,0.000023558963,0.00006145672,0.000021202955,0.000121557416,0.000030366355,0.0021200085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998581,0.0001838155,0.00041514105,0.00037460803,0.000023324605,0.00042210793],"domain_scores_gemma":[0.9991182,0.000102586964,0.00022871069,0.0004281392,0.00009192683,0.00003044159],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025096192,0.00029124407,0.00041883625,0.00028099076,0.000372249,0.000043040127,0.00024191584,0.00037047648,0.000078108],"category_scores_gemma":[0.000029898763,0.00020561373,0.00020085818,0.00053581706,0.00038231458,0.00012249168,0.00024748367,0.00022811696,0.00014552084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026817517,0.000087619046,0.008667076,0.000105131265,0.00020876854,0.0000029643813,0.00026832274,3.6209593e-7,0.98667157,0.0008226324,0.0010198103,0.0021189228],"study_design_scores_gemma":[0.000627436,0.00008247051,0.27007622,0.00011104338,0.00005747792,0.00004848176,0.00013341822,6.4384875e-7,0.72038794,0.000022910655,0.008263108,0.00018885742],"about_ca_topic_score_codex":0.00016823747,"about_ca_topic_score_gemma":0.000010626021,"teacher_disagreement_score":0.26628363,"about_ca_system_score_codex":0.000021812035,"about_ca_system_score_gemma":0.00004894884,"threshold_uncertainty_score":0.83846843},"labels":[],"label_agreement":null},{"id":"W4380421161","doi":"10.20944/preprints202306.0948.v1","title":"A Global Review of Invasive Haemophilus influenzae disease from 2000-2023: Current Status, Challenges and Future Perspectives","year":2023,"lang":"en","type":"review","venue":"Preprints.org","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Disease; Pathogen; Haemophilus; Serotype; Biology; Immunology; Medicine; Microbiology; Bacteria; Antibiotics; Pathology; Genetics","score_opus":0.14693088193422588,"score_gpt":0.38694164138770726,"score_spread":0.24001075945348138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380421161","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0039997944,0.991013,1.16161466e-7,0.00018448092,0.001530056,0.0010450367,0.0018613536,0.00009743778,0.00026871543],"genre_scores_gemma":[0.0001255921,0.99849105,0.000002229915,0.000016959151,0.00040057275,0.0002276168,0.0005770561,0.000034343906,0.00012459491],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99748564,0.00054263126,0.0007312071,0.0008593838,0.000037446585,0.00034371248],"domain_scores_gemma":[0.9981789,0.0001875045,0.0005615927,0.00079530734,0.00018297402,0.00009374441],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00023704045,0.0004947149,0.001767936,0.00012249185,0.00009651286,0.000007055038,0.0003020684,0.00036056657,0.001365822],"category_scores_gemma":[0.0004215387,0.00040057398,0.0004554725,0.00027302417,0.00015604186,0.000092504386,0.0006460505,0.00045344754,0.0012215205],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085637286,0.00039900764,0.0041860524,0.13740517,0.0023145808,0.000008752545,0.0008355543,5.799947e-8,0.000027214492,0.0014731066,0.00080301426,0.8524619],"study_design_scores_gemma":[0.0002607469,0.00002235379,0.04233251,0.04916796,0.0011618136,0.000013303655,0.00016444351,5.3728435e-9,0.0000034093582,0.00021015226,0.9063436,0.00031973724],"about_ca_topic_score_codex":0.00024448632,"about_ca_topic_score_gemma":0.00008573363,"teacher_disagreement_score":0.9055405,"about_ca_system_score_codex":0.00016099586,"about_ca_system_score_gemma":0.0005578766,"threshold_uncertainty_score":0.9998446},"labels":[],"label_agreement":null},{"id":"W4380883137","doi":"10.1002/alz.068074","title":"Outcome measures of cognitive gain in clinical trials of patients with primary central nervous system infections: A systematic review","year":2023,"lang":"en","type":"review","venue":"Alzheimer s & Dementia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Rehabilitation Institute; University of Toronto; University Health Network","funders":"","keywords":"Cognition; Neurocognitive; Medicine; Clinical trial; Randomized controlled trial; Clinical psychology; Psychiatry; Internal medicine","score_opus":0.18135451891755577,"score_gpt":0.3979416493986217,"score_spread":0.21658713048106593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380883137","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019055055,0.99143153,0.000021046586,0.000002493497,0.0014265429,0.0063065966,0.0005234424,0.000057331818,0.000040445077],"genre_scores_gemma":[0.007561931,0.99035317,0.000008900156,0.000015943046,0.00004047212,0.0007871254,0.00116491,0.00005905593,0.000008499756],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.986281,0.006372226,0.006483207,0.000438449,0.000072389346,0.0003527768],"domain_scores_gemma":[0.9925392,0.0024949957,0.0041237012,0.0004685714,0.00033887746,0.000034645658],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.005418283,0.00048334477,0.0079101,0.00037308683,0.00006150989,0.000011557341,0.00025565276,0.0005076084,0.00008546543],"category_scores_gemma":[0.00195264,0.0003117083,0.0011693011,0.0005996516,0.00011766107,0.000081306054,0.00012258689,0.0004381284,0.00010843132],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009799107,0.0009949851,0.00599751,0.7934043,0.09771349,0.0000028594418,0.000034958797,1.9245414e-7,0.0000016598918,0.00008498736,0.00036562874,0.10130146],"study_design_scores_gemma":[0.0016896068,0.00045798093,0.0035188538,0.71060497,0.27464643,0.000019580799,0.000031527383,6.405908e-8,0.0000057278107,0.0000013653298,0.0086079715,0.000415913],"about_ca_topic_score_codex":0.00017363974,"about_ca_topic_score_gemma":0.00006646355,"teacher_disagreement_score":0.17693295,"about_ca_system_score_codex":0.000024535238,"about_ca_system_score_gemma":0.0002533693,"threshold_uncertainty_score":0.9999335},"labels":[],"label_agreement":null},{"id":"W4381427677","doi":"10.7759/cureus.40623","title":"Non-contrast Enhancing Group A Streptococcus Subdural Empyema: An Illustrative Case Report of a Potential Radiographic Pitfall","year":2023,"lang":"en","type":"article","venue":"Cureus","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Medicine; Subdural empyema; Complication; Surgery; Empyema; Subdural effusion; Magnetic resonance imaging; Midline shift; Pneumonia; Radiology; Radiography; Pleural effusion; Computed tomography; Internal medicine","score_opus":0.01403508756565561,"score_gpt":0.2642873512404458,"score_spread":0.25025226367479014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381427677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99706024,0.0002099564,0.00023666705,0.00004039962,0.0017446737,0.00035449243,0.000063130305,0.00014221571,0.00014819774],"genre_scores_gemma":[0.99908704,0.000033119628,0.000028395998,0.000007360238,0.00016701537,0.000058441066,0.00029532623,0.000018774712,0.0003045356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874157,0.000098988785,0.00045964136,0.00033540023,0.000018983046,0.00034541253],"domain_scores_gemma":[0.99922705,0.000040277188,0.0002133634,0.00035657233,0.00012375752,0.000038994363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028165244,0.0001888414,0.00034156666,0.0001751373,0.00022626744,0.000020471385,0.0001115922,0.00024382815,0.00042172617],"category_scores_gemma":[0.00004140935,0.00016644667,0.00016882007,0.00039328952,0.00013165343,0.00021248171,0.000055945868,0.00019934063,0.000048214362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009182426,0.00020570288,0.0046490794,0.000021580205,0.00031363286,0.003112558,0.000719868,0.0000078516405,0.9892766,0.00018205823,0.0009313209,0.00048793724],"study_design_scores_gemma":[0.009960112,0.004663925,0.3656445,0.00022983378,0.0009099165,0.15508889,0.012945482,0.00019077174,0.44227773,0.00072894664,0.0054536266,0.0019062756],"about_ca_topic_score_codex":0.0021240374,"about_ca_topic_score_gemma":0.0037221955,"teacher_disagreement_score":0.54699886,"about_ca_system_score_codex":0.000019166486,"about_ca_system_score_gemma":0.000047107264,"threshold_uncertainty_score":0.6787498},"labels":[],"label_agreement":null},{"id":"W4381801005","doi":"10.5114/polp.2023.128662","title":"Acute bacterial meningitis in Polish children – assessment of risk factors of neurological complications","year":2023,"lang":"en","type":"article","venue":"Pediatria Polska","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meningitis; Bacterial meningitis; Pediatrics","score_opus":0.015441886930043022,"score_gpt":0.2871151013484498,"score_spread":0.2716732144184068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381801005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971636,0.000027935439,0.00000807982,0.00011131454,0.0008666279,0.00019987507,0.0013623658,0.00006555802,0.00019465764],"genre_scores_gemma":[0.9987894,0.0002037014,0.00003639957,0.000003685954,0.00010893773,0.000015640295,0.000804841,0.000009976233,0.000027412594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989663,0.00018340377,0.00041418744,0.00019468323,0.00001865307,0.00022277939],"domain_scores_gemma":[0.99923587,0.0002478071,0.00024127237,0.0002113309,0.00004574101,0.000017990289],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015007018,0.000119239645,0.00032346035,0.00023438933,0.00007248473,0.0000074384657,0.00015812334,0.0001731913,0.0004967608],"category_scores_gemma":[0.0000715327,0.000102537706,0.00010992809,0.00036405653,0.000070049486,0.000058744394,0.000106942956,0.00018779482,0.00002523512],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043124113,0.00012133032,0.8839516,0.0000034832199,0.000095108764,2.1810476e-7,0.00011655278,0.00001143068,0.11384477,0.0007602644,0.0008676928,0.00018443636],"study_design_scores_gemma":[0.0009997678,0.00018578024,0.99351054,0.0000029137514,0.00008399042,0.0000058285227,0.000022157214,0.0000040914238,0.0046196547,0.00009367456,0.00038598527,0.000085608146],"about_ca_topic_score_codex":0.001303113,"about_ca_topic_score_gemma":0.00009058762,"teacher_disagreement_score":0.109558955,"about_ca_system_score_codex":0.000009965799,"about_ca_system_score_gemma":0.000043274555,"threshold_uncertainty_score":0.5439183},"labels":[],"label_agreement":null},{"id":"W4383499446","doi":"10.1101/2023.07.06.548055","title":"Antigenic variation impacts gonococcal lifestyle and antibiotic tolerance by modulating interbacterial forces","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Deutsche Forschungsgemeinschaft","keywords":"Pilin; Pilus; Biology; Microbiology; Phase variation; Neisseria gonorrhoeae; Population; Biofilm; Fimbria; Bacteria; Antigenic variation; Fimbriae Proteins; Virulence; Neisseria; Antigen; Genetics; Gene","score_opus":0.012028269494687195,"score_gpt":0.22527315989291705,"score_spread":0.21324489039822986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383499446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99056226,0.0012117998,0.00047086514,0.00012826316,0.006155112,0.0005243838,0.00044019188,0.0005050854,0.0000020676275],"genre_scores_gemma":[0.99850684,0.00050087867,0.0002483556,0.000039716746,0.0005288246,0.000040703144,0.000007158476,0.00010425718,0.000023232358],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977461,0.00021240105,0.00059055217,0.0008591185,0.00002887582,0.0005629151],"domain_scores_gemma":[0.9985718,0.000098768796,0.0004539482,0.0006027117,0.00019262347,0.00008012129],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00043073864,0.00050239713,0.0006297187,0.00020449432,0.00031699552,0.0002710442,0.0002652822,0.0008865291,0.000075965916],"category_scores_gemma":[0.00022177651,0.00051549484,0.00012225602,0.0002489873,0.00010694311,0.00023818843,0.00047699636,0.0006354947,0.000147577],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005956697,0.00007392049,0.015523699,0.00018661152,0.00023721915,0.0000014582732,0.000024020115,0.000012900102,0.9832359,0.0000711966,0.0005682728,0.0000052554055],"study_design_scores_gemma":[0.0011303868,0.00013974078,0.5700724,0.0005573548,0.00015137595,1.5857023e-7,0.0000035529822,0.00020548979,0.42353743,0.0000028131033,0.0034259781,0.000773318],"about_ca_topic_score_codex":0.0004599469,"about_ca_topic_score_gemma":0.000012092661,"teacher_disagreement_score":0.55969846,"about_ca_system_score_codex":0.00009949346,"about_ca_system_score_gemma":0.00015561577,"threshold_uncertainty_score":0.9997297},"labels":[],"label_agreement":null},{"id":"W4384277359","doi":"10.1097/md.0000000000034151","title":"Treating cognitive impairments in primary central nervous system infections: A systematic review of pharmacological interventions","year":2023,"lang":"en","type":"review","venue":"Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Toronto Rehabilitation Institute; Alzheimer's Association","keywords":"Medicine; Psychological intervention; Central nervous system; Cognition; Intensive care medicine; MEDLINE; Physical medicine and rehabilitation; Psychiatry; Internal medicine","score_opus":0.0722163570228182,"score_gpt":0.39064118551498594,"score_spread":0.31842482849216774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384277359","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018196006,0.9938098,0.000018507271,0.000023608562,0.0016848358,0.0037114483,0.000120100565,0.00013688722,0.00031282884],"genre_scores_gemma":[0.00040360147,0.9965926,0.0000015716538,0.000028036813,0.0001122461,0.0013593138,0.00097291445,0.00003255533,0.00049720187],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99576336,0.0013298951,0.0022081712,0.00032566942,0.000036425277,0.00033647436],"domain_scores_gemma":[0.9977618,0.0007881428,0.0011016836,0.00019894772,0.00011713397,0.000032294804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009631209,0.00037520612,0.0039798142,0.00049911626,0.00008722171,0.0000045028637,0.00017494484,0.00031602892,0.0004560651],"category_scores_gemma":[0.0007839357,0.00023478884,0.0006521183,0.00086394674,0.000112102156,0.000046902995,0.00010895725,0.00047723725,0.00019999366],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000064791316,0.00023662564,0.000019559928,0.9817368,0.0013246705,0.00002281665,0.000046658584,2.8929774e-8,0.000018342866,0.000016449281,0.00055598444,0.016015578],"study_design_scores_gemma":[0.0007886127,0.00043391009,0.00009911275,0.9817017,0.011304502,0.0007194352,0.00014445354,2.4129454e-7,0.0000010256266,0.0000010363442,0.0046399026,0.00016612471],"about_ca_topic_score_codex":0.00022413244,"about_ca_topic_score_gemma":0.00001905661,"teacher_disagreement_score":0.015849452,"about_ca_system_score_codex":0.00031270832,"about_ca_system_score_gemma":0.00011348492,"threshold_uncertainty_score":0.9574411},"labels":[],"label_agreement":null},{"id":"W4384571557","doi":"10.2139/ssrn.4506566","title":"Paediatric Meningitis in the Conjugate Vaccine Era and Development of a Novel Clinical Decision Model to Predict Bacterial Aetiology in 3,002 Children with Suspected Meningitis","year":2023,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Institute of Infection and Immunity","funders":"","keywords":"Bacterial meningitis; Meningitis; Etiology; Medicine; Intensive care medicine; Conjugate vaccine; Pediatrics; Immunology; Internal medicine; Immunization; Immune system","score_opus":0.02271884718992768,"score_gpt":0.28337593956685175,"score_spread":0.2606570923769241,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384571557","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903973,0.0011594448,0.006552856,0.00033294703,0.0007561501,0.000697601,0.000065005,0.00003240822,0.0000062971185],"genre_scores_gemma":[0.993958,0.0038385654,0.0015811456,0.00001649551,0.00023156927,0.00007362924,0.00021300865,0.000040359682,0.000047238213],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99626476,0.00040199442,0.0013620472,0.0005567993,0.00006104562,0.0013533693],"domain_scores_gemma":[0.9987099,0.0003320759,0.0005039149,0.00027897797,0.0001338082,0.000041324136],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0033049444,0.00036602694,0.00083897123,0.00064782787,0.00017091991,0.000048076297,0.00044706985,0.0006062704,0.000037127167],"category_scores_gemma":[0.00022113946,0.00025640457,0.00010023448,0.0003487583,0.00005930306,0.00007144218,0.00042109168,0.0037316894,0.00000910498],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017755644,0.003410574,0.7263365,0.000103985694,0.006507899,0.000030927746,0.009191816,0.012700586,0.0738365,0.0063347393,0.0012442059,0.14254667],"study_design_scores_gemma":[0.020415593,0.0030711966,0.9617291,0.0005254295,0.0002902511,0.002921432,0.0007110159,0.00037695284,0.0005765915,0.008061689,0.0003829395,0.00093778723],"about_ca_topic_score_codex":0.000363895,"about_ca_topic_score_gemma":0.010958599,"teacher_disagreement_score":0.23539266,"about_ca_system_score_codex":0.000307713,"about_ca_system_score_gemma":0.002384084,"threshold_uncertainty_score":0.9999888},"labels":[],"label_agreement":null},{"id":"W4385064130","doi":"10.1016/s1474-4422(23)00195-3","title":"Global, regional, and national burden of meningitis and its aetiologies, 1990–2019: a systematic analysis for the Global Burden of Disease Study 2019","year":2023,"lang":"en","type":"review","venue":"The Lancet Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Health Data Research UK; European Social Fund; Division of Human Resource Development; Faculty of Medicine and Health, University of Sydney; Sistema Nacional de Investigadores; Russian Academy of Sciences; Fundação para a Ciência e a Tecnologia; National Health and Medical Research Council; Maryland Population Research Center, University of Maryland; Samsung; Directorate for Biological Sciences; National Institutes of Health; Uniwersytet Opolski; Humanitas Research Hospital; Pirogov Russian National Research Medical University; Universitas Sam Ratulangi; NIH Clinical Center; Moscow Institute of Physics and Technology; Jahrom University of Medical Sciences; Imam Abdulrahman Bin Faisal University; Lingnan University; Kurdistan University Of Medical Sciences; Al-Farabi Kazakh National University; University of Nizwa; Lorestan University of Medical Sciences; Alborz University of Medical Sciences; Kwame Nkrumah University of Science and Technology; Gonabad University of Medical Sciences; University of Zanjan; Khulna University; Dire Dawa University; Zanjan University of Medical Sciences; Tarbiat Modares University; Alfaisal University; University of Gondar; Madda Walabu University; Shahid Bahonar University of Kerman; Fakultet Medicinskih Nauka, Univerziteta U Kragujevcu; Universitatea de Medicină şi Farmacie \"Carol Davila\" Bucureşti; Universidade Federal de Minas Gerais; Urmia University; University of Cape Town; Secretaría Nacional de Ciencia, Tecnología e Innovación; Yarmouk University; Universidade de Lisboa; Shahrekord University of Medical Sciences; Universitetet i Oslo; Masarykova Univerzita; Universitair Medisch Centrum Groningen; Leids Universitair Medisch Centrum; Nankai University; Shahrekord University; Indian Council of Medical Research; Westfälische Wilhelms-Universität Münster; King Fahad Medical City; Haramaya University; Inyuvesi Yakwazulu-Natali; Federation University Australia; Abdul Wali Khan University Mardan; Universiti Kebangsaan Malaysia; Golestan University of Medical Sciences; Cardiff University; Università di Catania; Università degli Studi di Firenze; Sultan Qaboos University; Rajiv Gandhi University of Health Sciences; National Cheng Kung University; King Abdulaziz University; Urmia University of Medical Sciences; Universitas Padjadjaran; University of the Western Cape; Tulane University; Sungkyunkwan University; Gachon University; University of Exeter; Kyung Hee University; Universidad de Concepción; Yonsei University; Ministarstvo Prosvete, Nauke i Tehnološkog Razvoja; King Saud University; Centro Interdisciplinar de Investigação Marinha e Ambiental; Ain Shams University; Wollega University; Universiteit Stellenbosch; Public Health England; Ministerstvo Školství, Mládeže a Tělovýchovy; Tabriz University of Medical Sciences; Universitas Indonesia; University of Technology Sydney; University of Pretoria; University of New South Wales; Rijksuniversiteit Groningen; Cleveland Clinic; University College Cork; Amity University; Debre Tabor University; Shahid Beheshti University of Medical Sciences; Prince Sattam bin Abdulaziz University; Cancer Institute NSW; University of Leeds; McMaster University; University of Oxford; Isfahan University of Medical Sciences; Syddansk Universitet; Manipal Academy of Higher Education; Meningitis Research Foundation; Hormozgan University of Medical Sciences; Kasturba Medical College, Manipal; Northwell Health; Case Western Reserve University; University of Sydney; University of Wollongong; Asian Institute of Medicine, Science and Technology; Nemzeti Kutatási Fejlesztési és Innovációs Hivatal; University of Engineering and Technology, Lahore; Monash University; South Eastern Sydney Local Health District; Iran University of Medical Sciences; Rajarata University of Sri Lanka; Shaqra University; Lebanese American University; Süleyman Demirel Üniversitesi; Anglia Ruskin University; Taibah University; International Medical University; Wellcome Trust; Ministero della Salute; Arizona State University; National Institute for Health and Care Research; University of Patras; University of Karachi; Charles Sturt University; Universidade do Porto; Australian Government; Student Research Committee, Tabriz University of Medical Sciences; Bahir Dar University; Sheffield Hallam University; Mazandaran University of Medical Sciences; National Heart, Lung, and Blood Institute; Centre Hospitalier Universitaire Vaudois; Universiteit Leiden; Universiti Tun Hussein Onn Malaysia; James Cook University; Rajshahi University; Saveetha Institute of Medical and Technical Sciences; University of Tabriz; European Commission; Helsingin Yliopisto; Dilla University; Universität Basel; Universidade da Beira Interior; University of Central Punjab; Ahvaz Jundishapur University of Medical Sciences; Massachusetts General Hospital; Hawassa University; Kuwait University; Universidade de São Paulo; Academy of Scientific Research and Technology; Baqiyatallah University of Medical Sciences; University of Minnesota; Technische Universität München; Indiana University Health; Cleveland Clinic Foundation; Universidad de Antioquia; New Mexico State University; University of South Carolina; Islamic Azad University; U.S. Department of Veterans Affairs; Rice University; Vanderbilt University; National University of Singapore; Universitatea din București; La Trobe University; Curtin University of Technology; Bill and Melinda Gates Foundation","keywords":"Burden of disease; Medicine; Disease; Meningitis; Disease burden; Intensive care medicine; Global health; Environmental health; Pediatrics; Public health; Internal medicine; Pathology","score_opus":0.0883311845201253,"score_gpt":0.35306490319834405,"score_spread":0.26473371867821877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385064130","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019143978,0.9744739,0.000010160757,0.0010953852,0.000491206,0.0021198436,0.002615007,0.000038469458,0.000012030703],"genre_scores_gemma":[0.044910986,0.95397955,0.0000024004657,0.000041202202,0.00022324453,0.00038589706,0.0002832512,0.000015062017,0.00015839736],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.997653,0.0010065112,0.00067505834,0.0003731181,0.00004176468,0.00025051663],"domain_scores_gemma":[0.99655,0.0021305643,0.000712348,0.00042595156,0.00016162856,0.000019477155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007550893,0.00027442383,0.0021016505,0.00011216314,0.0001742738,0.00001661157,0.0004575535,0.00024106182,0.000018775916],"category_scores_gemma":[0.0005265556,0.0001464992,0.0002958759,0.0005310833,0.00022866168,0.000027452328,0.00029270208,0.00016548019,0.00001017152],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011000182,0.0019220851,0.024808208,0.3972263,0.24323054,0.000052373656,0.0026935525,0.0029510872,0.00028961158,0.114220366,0.15982962,0.041776083],"study_design_scores_gemma":[0.006566903,0.004229264,0.039521758,0.008059974,0.08272066,0.0009592942,0.0005023114,0.00034817064,0.0000010989552,0.00516019,0.8505488,0.0013815695],"about_ca_topic_score_codex":0.0006297263,"about_ca_topic_score_gemma":0.00011814236,"teacher_disagreement_score":0.6907192,"about_ca_system_score_codex":0.00001928556,"about_ca_system_score_gemma":0.00010917346,"threshold_uncertainty_score":0.5974064},"labels":[],"label_agreement":null},{"id":"W4385187541","doi":"10.7759/cureus.42376","title":"Community-Acquired Pseudomonas aeruginosa Meningitis in a Pediatric Patient","year":2023,"lang":"en","type":"article","venue":"Cureus","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Association of Nurses in Oncology; University of British Columbia","funders":"","keywords":"Meningitis; Meropenem; Pseudomonas aeruginosa; Medicine; Lumbar puncture; Intensive care medicine; Cerebrospinal fluid; Antibiotics; Rehabilitation; Pediatrics; Internal medicine; Antibiotic resistance; Microbiology; Physical therapy; Bacteria; Biology","score_opus":0.024572647308642784,"score_gpt":0.2574770006256255,"score_spread":0.23290435331698273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385187541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959371,0.00067228405,0.000003168417,0.00016438434,0.0014739375,0.00012598517,0.000018612109,0.000184706,0.0014198382],"genre_scores_gemma":[0.9987043,0.00032747042,0.000012709715,0.000027292625,0.000056156063,0.00004651235,0.00015509395,0.000011868218,0.0006585879],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991637,0.00024087341,0.00020461611,0.00011873856,0.0000096353215,0.0002624717],"domain_scores_gemma":[0.9995681,0.000097406766,0.000051288946,0.00023937983,0.000029600862,0.000014246029],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016255135,0.00010683073,0.00016091707,0.0001397979,0.00021413126,0.000013982529,0.00012653397,0.00014314806,0.00042134387],"category_scores_gemma":[0.00006499535,0.00010057445,0.000048627946,0.0004174444,0.000029854875,0.0000762694,0.00013094346,0.00018559344,0.00081914524],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016760916,0.0009247204,0.1441407,0.00007512592,0.00015713189,0.000031826527,0.008637029,0.000038170543,0.74748695,0.0018488555,0.079638965,0.016852882],"study_design_scores_gemma":[0.0042194533,0.0011554528,0.67184955,0.000058742968,0.00009749476,0.00020427702,0.0026827077,0.000015506199,0.049220614,0.0012997664,0.26832968,0.0008667513],"about_ca_topic_score_codex":0.00090264203,"about_ca_topic_score_gemma":0.0004685398,"teacher_disagreement_score":0.6982664,"about_ca_system_score_codex":0.000031234846,"about_ca_system_score_gemma":0.000020378282,"threshold_uncertainty_score":0.9999588},"labels":[],"label_agreement":null},{"id":"W4385297225","doi":"10.1016/s2589-7500(23)00108-5","title":"Trends in invasive bacterial diseases during the first 2 years of the COVID-19 pandemic: analyses of prospective surveillance data from 30 countries and territories in the IRIS Consortium","year":2023,"lang":"en","type":"article","venue":"The Lancet Digital Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":159,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"University of Oxford; National Institute for Health and Care Research; Wellcome Trust","keywords":"Pandemic; Haemophilus influenzae; Medicine; Incidence (geometry); Streptococcus pneumoniae; Neisseria meningitidis; Outbreak; Coronavirus disease 2019 (COVID-19); Demography; Virology; Disease; Biology; Infectious disease (medical specialty); Internal medicine; Microbiology","score_opus":0.08384007409281434,"score_gpt":0.35656869836716953,"score_spread":0.2727286242743552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385297225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883487,0.00085572636,2.9809e-7,0.0038671591,0.00031031476,0.00022764251,0.0063489545,0.00001994009,0.00002125949],"genre_scores_gemma":[0.9984532,0.00080811844,3.1764753e-7,0.00019722682,0.00012779917,0.000019765095,0.00036065135,0.0000055827722,0.000027309434],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990092,0.00027675685,0.0002940918,0.0001811195,0.00003286185,0.00020599355],"domain_scores_gemma":[0.99790657,0.0013302618,0.00020105818,0.0005301702,0.000020395633,0.000011530593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039075056,0.00009717464,0.00033913695,0.00005362631,0.0001864598,0.00004475558,0.00046561682,0.000048408394,0.000032902568],"category_scores_gemma":[0.00038674014,0.00004552936,0.000031937165,0.00036523206,0.0004482355,0.00013053023,0.00026068705,0.00014633885,0.0000027119754],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030717358,0.00003421681,0.99447066,0.00004625112,0.000054116907,5.7054325e-7,0.00217476,0.0000055644477,0.0005338349,0.000055847886,0.002098908,0.00021809463],"study_design_scores_gemma":[0.0008304866,0.00004240979,0.98831016,0.000033890356,0.000009200325,0.000008095298,0.00087664917,0.0000010068673,0.00010544233,0.00028653457,0.009445244,0.0000508732],"about_ca_topic_score_codex":0.008912724,"about_ca_topic_score_gemma":0.027156977,"teacher_disagreement_score":0.018244253,"about_ca_system_score_codex":0.000034428234,"about_ca_system_score_gemma":0.00013098196,"threshold_uncertainty_score":0.997687},"labels":[],"label_agreement":null},{"id":"W4385664125","doi":"10.1016/j.biologicals.2023.101698","title":"Stability of lyophilized Meningococcal A conjugate vaccine, (MenAfriVac™) at elevated temperatures to support controlled temperature chain (CTC) claim","year":2023,"lang":"en","type":"article","venue":"Biologicals","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Health Canada","keywords":"Vial; Conjugate; Meningococcal vaccine; Conjugate vaccine; Potency; Cold chain; Neisseria meningitidis; Consistency (knowledge bases); Product (mathematics); Medicine; Chemistry; Chromatography; Immunization; Mathematics; Antigen; Food science; Immunology; Biology","score_opus":0.026817384635690375,"score_gpt":0.2790891226149432,"score_spread":0.2522717379792528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385664125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953789,0.00024528767,0.0000018194888,0.0010546892,0.00087795197,0.0013996878,0.00044290684,0.00039128214,0.00020743604],"genre_scores_gemma":[0.9965426,0.0001073812,0.00002949435,0.00027663793,0.000096117605,0.00029131008,0.00076498196,0.0000199522,0.0018715416],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972251,0.000655595,0.00084695546,0.0006237024,0.0000297269,0.0006188876],"domain_scores_gemma":[0.99844074,0.00051763235,0.00022474823,0.00048923696,0.0002453602,0.00008228177],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010022004,0.00037544643,0.0012030444,0.00019198722,0.0003045616,0.0000270322,0.0003058609,0.00065615005,0.00501678],"category_scores_gemma":[0.0008912202,0.00023481133,0.00029440993,0.00066040014,0.00010952497,0.000051881805,0.0003031437,0.0003007789,0.00068878377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004192688,0.00016802485,0.007705715,0.00001806104,0.00024435212,0.0000033519952,0.00012404082,0.000002579805,0.97388756,0.00044019558,0.013139647,0.00007378431],"study_design_scores_gemma":[0.0133665595,0.002493784,0.054591175,0.000037681355,0.00008377458,0.00005018996,0.00017614492,0.000003853491,0.87082255,0.00020091332,0.057638127,0.0005352269],"about_ca_topic_score_codex":0.000050676037,"about_ca_topic_score_gemma":0.000040684587,"teacher_disagreement_score":0.10306499,"about_ca_system_score_codex":0.00005535329,"about_ca_system_score_gemma":0.00005711596,"threshold_uncertainty_score":0.99589276},"labels":[],"label_agreement":null},{"id":"W4385811795","doi":"10.3390/microorganisms11082082","title":"Outer-Membrane Vesicles of Fusobacterium necrophorum: A Proteomic, Lipidomic, and Functional Characterization","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hatch; College of Veterinary Medicine, Purdue University; Purdue University","keywords":"Bacterial outer membrane; Fusobacterium necrophorum; Biology; Microbiology; Bacterial adhesin; Virulence factor; Biochemistry; Virulence; Escherichia coli","score_opus":0.011746653206473954,"score_gpt":0.20558061275432563,"score_spread":0.19383395954785168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385811795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997294,0.0000511629,0.0001360515,0.00053899316,0.0013904184,0.00027104418,0.00012777929,0.00015432913,0.0000362011],"genre_scores_gemma":[0.99677825,0.00013665082,0.00005587133,0.00005325264,0.00016940078,0.00002650159,0.000716384,0.00002921409,0.002034466],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991137,0.000065134074,0.00030306831,0.00026007206,0.000014792972,0.00024326073],"domain_scores_gemma":[0.99956363,0.000029629375,0.00013359867,0.00017712076,0.00007486706,0.000021137601],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013525879,0.00016395151,0.00026399622,0.00016805815,0.00016687013,0.000030209047,0.0000753646,0.00018783998,0.0008717708],"category_scores_gemma":[0.000019780036,0.00015098849,0.00005475354,0.00023986663,0.000102227925,0.0001286276,0.00010743332,0.00011476333,0.0006124031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012529701,0.000044526736,0.002443398,0.00003575607,0.00006743026,6.6049944e-7,0.00017565598,3.0792324e-7,0.9941922,0.000120643694,0.00054935104,0.0022448073],"study_design_scores_gemma":[0.00087145047,0.00009290459,0.17020158,0.000017411454,0.000022751343,0.00007256102,0.000040328574,0.0000015428254,0.8123102,0.000030615054,0.016208207,0.00013039306],"about_ca_topic_score_codex":0.000038822553,"about_ca_topic_score_gemma":0.000004831156,"teacher_disagreement_score":0.18188192,"about_ca_system_score_codex":0.000015881576,"about_ca_system_score_gemma":0.000034519977,"threshold_uncertainty_score":0.95452785},"labels":[],"label_agreement":null},{"id":"W4386326710","doi":"10.1186/s12884-023-05938-2","title":"Impact of national recommendations for routine pertussis vaccination during pregnancy on infant pertussis in Ontario, Canada: a population-based time-series study","year":2023,"lang":"en","type":"article","venue":"BMC Pregnancy and Childbirth","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; Children's Hospital of Eastern Ontario; Ontario Tobacco Research Unit; University of Ottawa; University of Toronto; St. Michael's Hospital","funders":"Department of Family and Community Medicine, University of Toronto; University of Toronto","keywords":"Medicine; Pediatrics; Diphtheria; Population; Immunization; Pregnancy; Vaccination; Pertussis vaccine; Whooping cough; Incidence (geometry); Obstetrics; Environmental health; Immunology","score_opus":0.019101498646586033,"score_gpt":0.2646871721763387,"score_spread":0.24558567352975266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386326710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982949,0.00018634964,0.000010114479,0.00015656996,0.00019816389,0.00076400966,0.00026513322,0.00004451384,0.00008025782],"genre_scores_gemma":[0.99781877,0.000028120654,0.000037616897,0.0000065400527,0.000014478061,0.0002383554,0.00088535156,0.000014530791,0.0009562485],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99901104,0.00009735568,0.00037265924,0.0002665752,0.000036318143,0.00021603495],"domain_scores_gemma":[0.99941486,0.00017115568,0.00015428559,0.00014413202,0.000096442025,0.000019103205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008593485,0.00017226598,0.00026755946,0.00026042497,0.00027895725,0.000015441374,0.000070801696,0.00008822415,0.0005130841],"category_scores_gemma":[0.00011744537,0.00014325285,0.00007644494,0.0002312041,0.000009593949,0.00014598595,0.000028005377,0.00011688457,0.0000044027684],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027035223,0.00038563085,0.99652976,0.00004415568,0.000101082835,3.9387317e-7,0.00051640166,0.0003886563,0.0005358835,0.00009712408,0.00021341094,0.0009171307],"study_design_scores_gemma":[0.002791638,0.0004393974,0.9955524,0.00047258416,0.000018655737,0.000004498023,0.000091784554,0.00005566945,0.0002921501,0.00004348173,0.00007968983,0.00015800375],"about_ca_topic_score_codex":0.44003874,"about_ca_topic_score_gemma":0.889333,"teacher_disagreement_score":0.4492943,"about_ca_system_score_codex":0.00025088937,"about_ca_system_score_gemma":0.0005190471,"threshold_uncertainty_score":0.58416814},"labels":[],"label_agreement":null},{"id":"W4386566055","doi":"10.1016/j.jogc.2023.102215","title":"Pertussis Non-Vaccination During Pregnancy Despite Advice From Prenatal Care Providers","year":2023,"lang":"en","type":"article","venue":"Journal of Obstetrics and Gynaecology Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université de Montréal; University of Calgary; Statistics Canada; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada; Public Health Agency; Sanofi; GlaxoSmithKline; Moderna; Pfizer","keywords":"Medicine; Pregnancy; Prenatal care; Vaccination; Obstetrics; Advice (programming); Family medicine; Environmental health; Immunology; Population","score_opus":0.006736216061794556,"score_gpt":0.20933121651249997,"score_spread":0.20259500045070541,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386566055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97778803,0.008493244,0.00000446079,0.00019930376,0.013153332,0.00011418543,0.00006263432,0.000017607066,0.00016717441],"genre_scores_gemma":[0.9990815,0.00034566718,0.000033355118,0.000023545137,0.000030095654,0.0000061316423,0.000045499455,0.00001183736,0.00042235412],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991426,0.000063838525,0.00036326653,0.00015309769,0.000033101183,0.00024412388],"domain_scores_gemma":[0.9985853,0.00068619096,0.00029640424,0.00010410541,0.00028224796,0.000045791694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000050869447,0.0001282981,0.00026462245,0.0002865741,0.00024686745,0.000025410218,0.00012538218,0.00018726663,0.00038852036],"category_scores_gemma":[0.0008162172,0.00010828515,0.00005639296,0.00036541343,0.000020151141,0.00017173955,0.0000648872,0.0002665416,0.0000059477698],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062621846,0.00014832558,0.58946383,0.00038374707,0.0011802064,0.0011807347,0.0028219162,0.00017470896,0.024142811,0.000044018074,0.009175412,0.3712217],"study_design_scores_gemma":[0.0024043028,0.00020160394,0.98263675,0.000027824684,0.00008653439,0.00006045493,0.0011542034,0.000012032013,0.0039260397,0.000021252834,0.009317905,0.00015110752],"about_ca_topic_score_codex":0.025518823,"about_ca_topic_score_gemma":0.04183062,"teacher_disagreement_score":0.39317292,"about_ca_system_score_codex":0.00035692804,"about_ca_system_score_gemma":0.0005060287,"threshold_uncertainty_score":0.9809703},"labels":[],"label_agreement":null},{"id":"W4387008445","doi":"10.14745/ccdr.v49i09a01f","title":"Mise à jour du Comité consultatif national de l’immunisation (CCNI) sur l’épidémiologie de la méningococcie invasive (MI) et considérations pertinentes pour les programmes de prévention de la MI chez les personnes à haut risque d’exposition","year":2023,"lang":"fr","type":"article","venue":"Relevé des maladies transmissibles au Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"McGill University; Ottawa Public Health; Public Health Agency of Canada","funders":"","keywords":"Humanities; Medicine; Art","score_opus":0.021430550542086868,"score_gpt":0.25927972898615725,"score_spread":0.23784917844407039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387008445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.979248,0.008587774,0.001583945,0.007971308,0.0003296436,0.00042390788,0.00043954953,0.00020070797,0.0012151891],"genre_scores_gemma":[0.97094744,0.022847356,0.0020680218,0.00016493796,0.00023820851,0.0002568855,0.0007360469,0.00006121686,0.0026798986],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9949363,0.0030317,0.00061616255,0.0004035802,0.00008231374,0.00092994655],"domain_scores_gemma":[0.9945481,0.0043899543,0.00030862077,0.00016864203,0.00043668642,0.00014799772],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0017854276,0.0004418098,0.00044327482,0.00027452325,0.001681612,0.00020956993,0.00023196984,0.0007865628,0.0006027106],"category_scores_gemma":[0.0019919444,0.00047662863,0.00024350644,0.00042650034,0.0010741596,0.00027496528,0.00004454046,0.0006830408,0.000010766095],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005704477,0.00074907014,0.345959,0.0031895489,0.0015638326,0.00009793883,0.014987012,0.007846195,0.5688179,0.012294319,0.03462929,0.0092954235],"study_design_scores_gemma":[0.0040613455,0.00045843562,0.8405659,0.004226668,0.00072289904,0.0025702335,0.01824148,0.002943848,0.07442369,0.00527964,0.045454912,0.0010509454],"about_ca_topic_score_codex":0.44517726,"about_ca_topic_score_gemma":0.5945625,"teacher_disagreement_score":0.49460688,"about_ca_system_score_codex":0.0012516449,"about_ca_system_score_gemma":0.0079351105,"threshold_uncertainty_score":0.99976856},"labels":[],"label_agreement":null},{"id":"W4387008790","doi":"10.14745/ccdr.v49i09a01","title":"A National Advisory Committee on Immunization (NACI) update on invasive meningococcal disease (IMD) epidemiology and program-relevant considerations for preventing IMD in individuals at high risk of exposure","year":2023,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Nova Scotia Department of Health and Wellness; Nova Scotia Health Authority; Public Health Agency of Canada; McGill University; Children's Hospital of Eastern Ontario; University of Ottawa","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Advisory committee; Epidemiology; Medicine; Immunization; Meningococcal vaccine; Vaccination; Population; Meningococcal disease; Environmental health; Carriage; Disease; Steering committee; Family medicine; Neisseria meningitidis; Immunology; Political science; Internal medicine; Pathology; Public administration","score_opus":0.03487424079678009,"score_gpt":0.2942835850019492,"score_spread":0.2594093442051691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387008790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946992,0.0008636,0.0000049137907,0.0017645508,0.0002742017,0.0010674284,0.0011958388,0.000062499515,0.00006778569],"genre_scores_gemma":[0.9939773,0.00048264637,0.00014107648,0.0002131516,0.00002133044,0.00063114933,0.0042030727,0.000023423609,0.0003068174],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975153,0.0009372334,0.0008205667,0.00032892992,0.000055313245,0.00034262167],"domain_scores_gemma":[0.99545866,0.003015197,0.00056442624,0.00061237166,0.00024615697,0.00010319575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011867038,0.00020651022,0.00045848274,0.000198139,0.0006289056,0.0000138218875,0.00014978938,0.00012236754,0.000096795375],"category_scores_gemma":[0.006292824,0.00019822113,0.00009290147,0.00021396793,0.00015413594,0.000079869365,0.00023844717,0.00027245877,0.0000045114016],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007983244,0.0008621,0.9462166,0.00022842207,0.0007153068,0.000052078565,0.00016885911,0.005400396,0.0024991778,0.011665235,0.030194746,0.0011987771],"study_design_scores_gemma":[0.0022254304,0.0002078752,0.97246933,0.0002865534,0.00018593435,0.000033317276,0.00013490458,0.00020810326,0.0005407033,0.0069521386,0.016448714,0.00030697352],"about_ca_topic_score_codex":0.022496795,"about_ca_topic_score_gemma":0.1055589,"teacher_disagreement_score":0.08306211,"about_ca_system_score_codex":0.00018550082,"about_ca_system_score_gemma":0.0012092488,"threshold_uncertainty_score":0.9840125},"labels":[],"label_agreement":null},{"id":"W4387008837","doi":"10.14745/ccdr.v49i09a02","title":"A Pediatric Investigators Collaborative Network on Infections in Children (PICNIC) multi-centre Canadian descriptive analysis of Haemophilus influenzae bacteremia in children: Emerging serotypes","year":2023,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; Children's Hospital of Eastern Ontario; NOSM University; Kingston Health Sciences Centre; Stollery Children's Hospital; Children's Hospital of Winnipeg; London Health Sciences Centre; McMaster Children's Hospital; Izaak Walton Killam Health Centre; Montreal Children's Hospital","funders":"","keywords":"Bacteremia; Meningitis; Serotype; Medicine; Haemophilus influenzae; Pneumonia; Pediatrics; Conjugate vaccine; Virology; Immunology; Microbiology; Internal medicine; Antibiotics; Immunization; Biology; Antibody","score_opus":0.013052368239149967,"score_gpt":0.23857739310799433,"score_spread":0.22552502486884438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387008837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734235,0.0009571157,4.5573094e-7,0.00018310332,0.00030108812,0.0005492275,0.000515329,0.000048236743,0.00010310164],"genre_scores_gemma":[0.99742424,0.00030292998,0.000010559186,0.0000941806,0.00003105992,0.00006376442,0.0019402829,0.00002433913,0.00010865519],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99780506,0.0004454385,0.0007294847,0.00037720415,0.00005132471,0.00059147016],"domain_scores_gemma":[0.9983371,0.00011657118,0.00030826803,0.00083114905,0.00018824654,0.00021866905],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034459392,0.00027198013,0.0006195482,0.0012128898,0.00034384814,0.000022167113,0.00028647276,0.00017513975,0.00013612508],"category_scores_gemma":[0.00041361936,0.00028784998,0.00012545874,0.0056656306,0.00008865721,0.000120927376,0.00014245817,0.0004681527,0.000008378338],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033756718,0.0001227308,0.98366374,0.0000067980327,0.00090110285,0.000034892204,0.00017079595,0.012537318,0.000058139638,0.00006172322,0.0023588496,0.000050128292],"study_design_scores_gemma":[0.00078662037,0.000021537537,0.9966557,0.000049854556,0.00044834136,0.000016807464,0.00022013846,0.00012257749,0.000030946587,0.000013057858,0.0013710987,0.00026332686],"about_ca_topic_score_codex":0.95420235,"about_ca_topic_score_gemma":0.9935059,"teacher_disagreement_score":0.039303552,"about_ca_system_score_codex":0.0006376808,"about_ca_system_score_gemma":0.003777686,"threshold_uncertainty_score":0.9999574},"labels":[],"label_agreement":null},{"id":"W4387242563","doi":"10.1101/2023.10.02.560488","title":"<i>Streptomyces</i> extracellular vesicles are a broad and permissive antimicrobial packaging and delivery system","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Temerty Faculty of Medicine, University of Toronto; Canadian Institutes of Health Research; Hospital for Sick Children; University of Toronto","keywords":"Antimicrobial; Vesicle; Biology; Streptomyces; Extracellular vesicle; Microbiology; Biochemistry; Antimicrobial peptides; Bacteria; Membrane; Microvesicles","score_opus":0.014427235974292005,"score_gpt":0.20474196340515563,"score_spread":0.19031472743086364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387242563","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98783755,0.007835104,0.00006509446,0.00020051266,0.002426387,0.000488942,0.00047920243,0.00066492683,0.000002282008],"genre_scores_gemma":[0.99812794,0.0011540436,0.00016699881,0.00003736266,0.00028760164,0.00007514913,0.0000023315392,0.000110690606,0.000037878493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977186,0.00021569585,0.000494414,0.0010170265,0.00003416509,0.0005201326],"domain_scores_gemma":[0.9984615,0.00009527775,0.0004538421,0.00063724467,0.00025673638,0.000095401585],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033179388,0.0005543182,0.00071663456,0.0002766364,0.0004406525,0.00025292483,0.00022627201,0.00081882934,0.000026665126],"category_scores_gemma":[0.0000695199,0.00057201233,0.000116470495,0.00020938583,0.0002055617,0.00014747953,0.000670715,0.0007043368,0.00010611494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042649885,0.00004964369,0.019406153,0.0009202598,0.00030969098,0.000046604826,0.000019708448,0.000002625255,0.97814435,0.00012849605,0.0009233184,0.000006506427],"study_design_scores_gemma":[0.0014108218,0.000062322564,0.22541842,0.0023101051,0.0004288817,0.0000019076274,0.00007656847,0.000037263468,0.76126117,8.630793e-7,0.007839222,0.0011524729],"about_ca_topic_score_codex":0.00027907945,"about_ca_topic_score_gemma":0.0000070067654,"teacher_disagreement_score":0.2168832,"about_ca_system_score_codex":0.00009381399,"about_ca_system_score_gemma":0.00015666336,"threshold_uncertainty_score":0.9996731},"labels":[],"label_agreement":null},{"id":"W4387456729","doi":"10.1016/j.vaccine.2023.09.063","title":"Tdap vaccine in pregnancy and immunogenicity of pertussis and pneumococcal vaccines in children: What is the impact of different immunization schedules?","year":2023,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec; BC Children's Hospital; Dalhousie University; NOSM University; University of British Columbia; Centre hospitalier de l'Université Laval","funders":"Medical Research Council","keywords":"Medicine; Pertactin; Pneumococcal conjugate vaccine; Vaccination; Booster dose; Vaccination schedule; Immunogenicity; Diphtheria; Immunization; Pneumococcal vaccine; Pneumococcal infections; Whooping cough; Pediatrics; Immunology; Antibody; Streptococcus pneumoniae; Pertussis toxin; Internal medicine; Biology; Microbiology","score_opus":0.009424968437502165,"score_gpt":0.2541924081208413,"score_spread":0.24476743968333914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387456729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98535454,0.013571446,0.0000027174046,0.00043113116,0.00013795741,0.00044637974,0.000027360069,0.000024622677,0.0000038277976],"genre_scores_gemma":[0.9817768,0.018031197,0.0000035612095,0.000006706231,0.000015626434,0.000018359102,0.00008577752,0.000016931786,0.000045053563],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99874353,0.00017338217,0.0005529197,0.0002549239,0.000018740631,0.00025650705],"domain_scores_gemma":[0.99924374,0.00014709203,0.0001957507,0.00033105176,0.000065829365,0.00001651694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019519877,0.00022442866,0.00050887576,0.0003710509,0.000082504645,0.000023071112,0.00015191846,0.00018344235,0.00019083881],"category_scores_gemma":[0.00005998923,0.00013864994,0.000093705836,0.0006215302,0.000018734514,0.00025963888,0.00021429051,0.00020617798,0.0000047277044],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018977937,0.00015193319,0.6792167,0.000026153833,0.00013141337,1.9426194e-7,0.0003929763,0.000010784188,0.31447354,0.000056161927,0.00001652807,0.005333875],"study_design_scores_gemma":[0.0032140047,0.0002979939,0.9602127,0.0003305666,0.000030078518,0.000028584574,0.00027177192,0.0000721388,0.035208788,0.00019744993,0.000008972205,0.00012697166],"about_ca_topic_score_codex":0.0014715901,"about_ca_topic_score_gemma":0.00021354486,"teacher_disagreement_score":0.28099602,"about_ca_system_score_codex":0.000024229765,"about_ca_system_score_gemma":0.000021271206,"threshold_uncertainty_score":0.56539804},"labels":[],"label_agreement":null},{"id":"W4387486630","doi":"10.21203/rs.3.rs-3412671/v1","title":"A Global Review of Invasive Haemophilus influenzae Disease from 2000-2023: Current Status, Challenges and Future Perspectives","year":2023,"lang":"en","type":"review","venue":"Research Square","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Disease; Pathogen; Haemophilus; Biology; Immunology; Microbiology; Medicine; Bacteria; Antibiotics; Pathology; Genetics","score_opus":0.12144771451671268,"score_gpt":0.43027847779238526,"score_spread":0.3088307632756726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387486630","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018202007,0.99050885,1.02878545e-7,0.00035873722,0.00077636784,0.001722575,0.006210038,0.00006629745,0.00017499524],"genre_scores_gemma":[0.000014425828,0.9973186,0.0000028437457,0.000005854331,0.0006573722,0.00037715182,0.0014459838,0.00004314209,0.00013460297],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99601555,0.001757068,0.00064918475,0.00079424185,0.00011293492,0.000671048],"domain_scores_gemma":[0.99748546,0.0007346695,0.00028051337,0.0007037735,0.00063890254,0.00015666883],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00062259845,0.00045380925,0.0017823316,0.0003431927,0.00022085245,0.000032595643,0.0003476333,0.00043040497,0.0007407422],"category_scores_gemma":[0.00092728366,0.00034045402,0.00045223028,0.0008026376,0.00032457724,0.000108294706,0.0005825856,0.0009127874,0.00041785266],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051626146,0.00018232664,0.000038833026,0.1880859,0.0006168894,0.000010065095,0.00029286742,1.07285985e-8,0.0000017755291,0.0013653141,0.006788879,0.8025655],"study_design_scores_gemma":[0.0002688063,0.0001330736,0.0023168507,0.13209878,0.0003635179,0.000009886142,0.00064470596,1.2858085e-8,3.1705525e-7,0.00028429003,0.8636297,0.0002500596],"about_ca_topic_score_codex":0.00044214533,"about_ca_topic_score_gemma":0.00025861143,"teacher_disagreement_score":0.85684085,"about_ca_system_score_codex":0.00031645928,"about_ca_system_score_gemma":0.0015170515,"threshold_uncertainty_score":0.99990475},"labels":[],"label_agreement":null},{"id":"W4387643850","doi":"10.1016/j.vaccine.2023.10.020","title":"Uptake of pertussis immunization in pregnancy and determinants of vaccination in Toronto, Canada","year":2023,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Nova Scotia Health Authority; Izaak Walton Killam Health Centre; University of Toronto; Dalhousie University; Hospital for Sick Children; Public Health Ontario","funders":"Canadian Institutes of Health Research; Physicians' Services Incorporated Foundation","keywords":"Medicine; Vaccination; Pregnancy; Immunization; Logistic regression; Odds ratio; Tetanus; Pediatrics; Pertussis vaccine; Obstetrics; Whooping cough; Demographics; Immunology; Demography; Internal medicine; Antibody","score_opus":0.010177000740508903,"score_gpt":0.24875715530766002,"score_spread":0.23858015456715112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387643850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757946,0.0018848979,0.0000013102506,0.000042072577,0.0002453204,0.00011633,0.000015354106,0.0000085691445,0.000106704894],"genre_scores_gemma":[0.9987006,0.0010153453,0.000008323898,0.0000026080509,0.000004392801,0.0000061245855,0.00004004565,0.0000054898273,0.00021703001],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994341,0.000041882577,0.00031316403,0.00009486827,0.000008829139,0.00010713211],"domain_scores_gemma":[0.9997202,0.00004002036,0.00009083127,0.00010246667,0.000041280015,0.0000051877723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008943494,0.00006327157,0.00019208233,0.00010728417,0.00001936741,0.0000014773655,0.00004797415,0.00007421553,0.00029801944],"category_scores_gemma":[0.000063150066,0.000057107525,0.000011587102,0.00025565576,0.0000022130796,0.00008618667,0.00003437481,0.00003970424,0.0000011822767],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006912569,0.0000697451,0.7565458,0.00008181157,0.000014809313,0.0000011843501,0.00029375794,0.000010679053,0.17257966,0.00010877382,0.0002011344,0.070023544],"study_design_scores_gemma":[0.0010641352,0.00005886544,0.9660664,0.00012548796,0.000005413117,0.0000037137813,0.00021201516,0.000058925023,0.0318446,0.000015307744,0.00049569283,0.000049419097],"about_ca_topic_score_codex":0.5101246,"about_ca_topic_score_gemma":0.90502584,"teacher_disagreement_score":0.39490122,"about_ca_system_score_codex":0.000059268812,"about_ca_system_score_gemma":0.00005561441,"threshold_uncertainty_score":0.4931375},"labels":[],"label_agreement":null},{"id":"W4388347846","doi":"10.1016/j.jmb.2023.168344","title":"Antibody and B-cell Immune Responses Against Bordetella Pertussis Following Infection and Immunization","year":2023,"lang":"en","type":"review","venue":"Journal of Molecular Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"Medical Research Council; European Research Council; Horizon 2020 Framework Programme; Michael Smith Health Research BC; BC Children’s Hospital Foundation","keywords":"Bordetella pertussis; Immunization; Immunology; Immunity; Antibody; Immune system; Biology; Pertussis toxin; B cell; Pertussis vaccine; Avidity; Humoral immunity; Vaccination; Whooping cough; Virology; Bacteria; G protein; Receptor","score_opus":0.02204141844136578,"score_gpt":0.34277598611562315,"score_spread":0.3207345676742574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388347846","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1263276,0.8714618,0.00030158603,0.000025803922,0.0016215836,0.00018260037,0.000015497377,0.000022750435,0.00004076677],"genre_scores_gemma":[0.007821689,0.9915628,0.00004961464,0.000015099367,0.00007107378,0.0000056817917,0.00024060566,0.000044837816,0.00018860857],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977306,0.0009464809,0.00084993674,0.00023062402,0.000015155157,0.00022721961],"domain_scores_gemma":[0.9985636,0.00029295645,0.00081850216,0.00018662751,0.000109705885,0.000028593968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006301265,0.00030919112,0.0013140688,0.0006266037,0.00018191773,0.000037044658,0.00011816257,0.0007543561,0.000015222246],"category_scores_gemma":[0.00032414257,0.00023140499,0.00043569336,0.0002775628,0.00009446403,0.00006581695,0.00014980814,0.0005214253,0.000018117858],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000703602,0.00008026536,0.0003052876,0.0012205185,0.001336797,0.000032292504,0.00005801109,5.013986e-7,0.67394066,0.00006335335,0.00003262439,0.32285935],"study_design_scores_gemma":[0.0011495291,0.0007958033,0.0004170739,0.0028565307,0.0012022034,0.0013173777,0.000031470965,5.4241406e-7,0.0022620372,0.00007118233,0.9894838,0.00041249828],"about_ca_topic_score_codex":0.00004984237,"about_ca_topic_score_gemma":0.000003384892,"teacher_disagreement_score":0.9894511,"about_ca_system_score_codex":0.00003288326,"about_ca_system_score_gemma":0.00012330452,"threshold_uncertainty_score":0.9436422},"labels":[],"label_agreement":null},{"id":"W4388714232","doi":"10.33321/cdi.2023.47.59","title":"Meningococcal Surveillance Australia - Reporting period 1 January to 31 March 2023","year":2023,"lang":"en","type":"article","venue":"Communicable Diseases Intelligence","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarter (Canadian coin); Neisseria meningitidis; Medicine; Communicable disease; Public health surveillance; Public health; Demography; Pediatrics; Geography; Biology","score_opus":0.08628024116899614,"score_gpt":0.36642926464975706,"score_spread":0.28014902348076093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388714232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940517,0.0012026918,0.0001732128,0.0007235289,0.0014339155,0.00041211193,0.0001795816,0.00038200954,0.0014412728],"genre_scores_gemma":[0.9887011,0.00021815216,0.00009102737,0.000051723768,0.000063803454,0.00015194574,0.00042615333,0.000020846146,0.010275227],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978992,0.00024878958,0.0008759483,0.00037072727,0.000032723066,0.0005726524],"domain_scores_gemma":[0.9980196,0.00033157124,0.00029354697,0.0011269292,0.00013784427,0.000090523805],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005690026,0.00021741955,0.00041542295,0.00017562177,0.00055645977,0.00007391939,0.0007537822,0.0001480266,0.0017692191],"category_scores_gemma":[0.0013356823,0.00020919446,0.00015994687,0.00082851865,0.00015904794,0.000115867246,0.0008267478,0.0003509984,0.005330098],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007382207,0.0007962143,0.32218784,0.0001958747,0.0005558915,0.00007880446,0.0013037517,0.0018653503,0.3431115,0.0025196911,0.28789058,0.03875629],"study_design_scores_gemma":[0.0005035791,0.0006771757,0.36740875,0.0003087173,0.00010139016,0.0001904582,0.003775361,0.0004425933,0.030480977,0.0013975495,0.59323394,0.0014795363],"about_ca_topic_score_codex":0.0005874457,"about_ca_topic_score_gemma":0.0001398717,"teacher_disagreement_score":0.3126305,"about_ca_system_score_codex":0.000051020306,"about_ca_system_score_gemma":0.00007132695,"threshold_uncertainty_score":0.9991433},"labels":[],"label_agreement":null},{"id":"W4388871823","doi":"10.1016/j.jvacx.2023.100408","title":"Validating pertussis data measures using electronic medical record data in Ontario, Canada 1986–2016","year":2023,"lang":"en","type":"article","venue":"Vaccine X","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Vector Institute; Dalhousie University; Canada Research Chairs; Public Health Ontario; University of Toronto","funders":"Department of Family and Community Medicine, University of Toronto; Canadian Institutes of Health Research; Institute for Clinical Evaluative Sciences; Canadian Institute for Advanced Research; World Health Organization; University of Toronto; Ontario Ministry of Health and Long-Term Care","keywords":"Medicine; Medical record; Predictive value; Electronic medical record; Positive predicative value; Diagnostic accuracy; Sensitivity (control systems); Medical history; Pediatrics; Medical emergency; Internal medicine","score_opus":0.07598604763582617,"score_gpt":0.2948450329240636,"score_spread":0.21885898528823744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388871823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99649686,0.00041845007,0.000044417688,0.0009780556,0.0015947527,0.00012059982,0.00012897873,0.00007832835,0.00013958712],"genre_scores_gemma":[0.9940723,0.00022600824,0.000061137136,0.00013500855,0.00016805988,0.000004283767,0.0037498511,0.00002654837,0.0015567688],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99831444,0.00015593744,0.0004058501,0.00052200584,0.000047177185,0.0005545663],"domain_scores_gemma":[0.99841124,0.00016671151,0.00008830241,0.0012603427,0.00003665551,0.000036746034],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00087358407,0.00016586504,0.00029624684,0.00014091156,0.00018824506,0.00002252151,0.0009820639,0.00017717619,0.0039548525],"category_scores_gemma":[0.00057430344,0.00013878777,0.000020015816,0.00037405785,0.000009676668,0.00023999944,0.000984715,0.0004923877,0.000085518055],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023220235,0.00017506663,0.4261426,0.00003357273,0.00053561584,0.000043668588,0.00016967069,0.000019875682,0.15550606,0.000114993425,0.35981092,0.057215758],"study_design_scores_gemma":[0.0015474415,0.000057873247,0.0945666,0.00011279296,0.000067963585,0.00012931364,0.00013374386,0.00077641924,0.0011535534,0.000042445827,0.9010911,0.00032078338],"about_ca_topic_score_codex":0.9900697,"about_ca_topic_score_gemma":0.9989938,"teacher_disagreement_score":0.54128015,"about_ca_system_score_codex":0.00027659629,"about_ca_system_score_gemma":0.0027383198,"threshold_uncertainty_score":0.9969557},"labels":[],"label_agreement":null},{"id":"W4388914208","doi":"10.1016/j.jinf.2023.11.007","title":"Increasing incidence of community-acquired adult group A streptococcal meningitis in the Netherlands","year":2023,"lang":"en","type":"letter","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw","keywords":"Incidence (geometry); Meningitis; Medicine; Bacterial meningitis; STREPTOCOCCAL INFECTIONS; Pediatrics; Immunology","score_opus":0.023769370573431668,"score_gpt":0.275126453087492,"score_spread":0.25135708251406036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388914208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852649,0.00011038635,0.000049354152,0.01212976,0.0021544877,0.00016462563,0.000015106795,0.000019935214,0.00009143722],"genre_scores_gemma":[0.99202377,0.00028512196,0.000020288282,0.006098061,0.0013227386,0.000017250812,0.00012947166,0.000030054201,0.000073221476],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99660826,0.0022585536,0.0007984479,0.0000805361,0.000048304562,0.00020590026],"domain_scores_gemma":[0.9974674,0.0009808943,0.001023201,0.00023748227,0.0002832838,0.000007751644],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0016959913,0.00019120514,0.00048890564,0.00048220894,0.00019805196,0.000036889905,0.0002357146,0.00071771006,0.00010306544],"category_scores_gemma":[0.0004915114,0.00013222988,0.00023511944,0.00038659608,0.00009808018,0.0001862423,0.00006106447,0.0023583404,0.000016716254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006600171,0.00048297562,0.0998341,0.00035992177,0.00084230857,0.000078411365,0.0043559833,0.000029777282,0.27291995,0.000050481165,0.614012,0.006374081],"study_design_scores_gemma":[0.00441693,0.0045781555,0.65496033,0.0026797547,0.0005386572,0.010370167,0.0011079704,0.000007754269,0.005550513,0.00095792726,0.31417033,0.0006615117],"about_ca_topic_score_codex":0.0065702945,"about_ca_topic_score_gemma":0.00096445234,"teacher_disagreement_score":0.55512625,"about_ca_system_score_codex":0.0000804429,"about_ca_system_score_gemma":0.000053982585,"threshold_uncertainty_score":0.99994326},"labels":[],"label_agreement":null},{"id":"W4389447222","doi":"10.1212/wnl.88.16_supplement.p1.342","title":"Evidence Supporting the Use of MRI as a Surrogate for Clinical Endpoints in Randomized Controlled Trials for Pediatric Multiple Sclerosis (P1.342)","year":2017,"lang":"en","type":"article","venue":"Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Hospital for Sick Children; Montreal Neurological Institute and Hospital","funders":"","keywords":"Multiple sclerosis; Medicine; Surrogate endpoint; Randomized controlled trial; Clinical endpoint; Clinical trial; Endpoint Determination; Internal medicine; Psychiatry","score_opus":0.3561172599683093,"score_gpt":0.41288453957925747,"score_spread":0.056767279610948185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389447222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883001,0.0008112227,0.00031897367,0.002754388,0.0033538663,0.004373676,0.000058683025,0.000020812895,0.000008303241],"genre_scores_gemma":[0.99522287,0.0028236606,0.0001015471,0.00032263162,0.00025945558,0.0010994631,0.000012120454,0.000016822358,0.0001414449],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9937183,0.0034330103,0.0021084764,0.00035855174,0.000016260126,0.00036539233],"domain_scores_gemma":[0.9325924,0.06457275,0.0021617236,0.00047666678,0.00017763436,0.000018810908],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.012177924,0.00018260999,0.0029407707,0.00012512364,0.00034970627,0.000046658297,0.0003303636,0.00038898777,0.0001243923],"category_scores_gemma":[0.12838265,0.00010742516,0.0011462431,0.000041543582,0.00029001542,0.00016034434,0.00010896877,0.00025331523,0.000014064019],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.83909595,0.00032901714,0.08657972,0.000045532,0.0006115362,0.0000012385259,0.00010953122,0.000020633024,0.066631116,0.00041999904,0.0022377963,0.0039179237],"study_design_scores_gemma":[0.90398026,0.00282408,0.07428723,0.00006247047,0.0016527601,0.000032135777,0.000010418908,0.0005747038,0.0062053395,0.0007467455,0.009339623,0.00028426552],"about_ca_topic_score_codex":0.0004903424,"about_ca_topic_score_gemma":0.00043110616,"teacher_disagreement_score":0.11620472,"about_ca_system_score_codex":0.0000040477257,"about_ca_system_score_gemma":0.00008874195,"threshold_uncertainty_score":0.87895936},"labels":[],"label_agreement":null},{"id":"W4389746646","doi":"10.1007/978-981-99-6445-1_3","title":"Clinical Presentation and Diagnosis of CNS Infections Through a Systematic Approach","year":2023,"lang":"en","type":"book-chapter","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; Juravinski Hospital","funders":"","keywords":"Lumbar puncture; Medicine; Neuroimaging; Pleocytosis; Physical examination; Lymphocytic pleocytosis; Encephalitis; Altered Mental Status; Meningitis; Intensive care medicine; Brain abscess; Medical history; CSF pleocytosis; Abscess; Pathology; Pediatrics; Cerebrospinal fluid; Radiology; Surgery; Immunology; Psychiatry","score_opus":0.07480775262054785,"score_gpt":0.32641784132992063,"score_spread":0.2516100887093728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389746646","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025271684,0.0041054157,0.0018034687,0.00024243271,0.0073709325,0.004097978,0.00035789845,0.0006587527,0.95609146],"genre_scores_gemma":[0.05654461,0.010162504,0.00017431518,0.000028311846,0.00018193707,0.00036860138,0.0004543158,0.0000724495,0.932013],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99880475,0.00010253912,0.000688242,0.0002663591,0.000013507706,0.00012459786],"domain_scores_gemma":[0.9987257,0.0006079459,0.00031230485,0.00024919744,0.00009370969,0.00001113791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024635668,0.00018600868,0.00064758013,0.000113934184,0.000096246484,0.000012724598,0.00006427738,0.000619437,0.00045617222],"category_scores_gemma":[0.00010921665,0.00014454412,0.00018807282,0.00003701147,0.00014179618,0.00006947,0.000090448,0.00027709638,0.00026175796],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063123225,0.00066701503,0.015880266,0.021517761,0.004667331,0.0000010570894,0.00052109826,0.0000038621706,0.00066470675,0.9265163,0.02830285,0.0011946567],"study_design_scores_gemma":[0.025318759,0.012863853,0.092591286,0.053193808,0.03162695,0.0021791854,0.004589907,0.00010013454,0.0051528392,0.25981528,0.50284266,0.009725342],"about_ca_topic_score_codex":0.000251991,"about_ca_topic_score_gemma":0.00010221941,"teacher_disagreement_score":0.666701,"about_ca_system_score_codex":0.00001062275,"about_ca_system_score_gemma":0.000029853212,"threshold_uncertainty_score":0.5894338},"labels":[],"label_agreement":null},{"id":"W4390099292","doi":"10.1097/inf.0000000000004197","title":"Epidemiology and Outcomes of Neonatal Meningitis: Results of the Turkish Neo-Meningitis Nationwide Study","year":2023,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Odds ratio; Meningitis; Incidence (geometry); Epidemiology; Confidence interval; Internal medicine; Pediatrics; Respiratory distress; Neonatal intensive care unit; Surgery","score_opus":0.015607659537417452,"score_gpt":0.27455305571746613,"score_spread":0.2589453961800487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390099292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957154,0.0009907105,0.000018962863,0.00070115423,0.0020089443,0.00029301466,0.00013364077,0.00004695118,0.00009126527],"genre_scores_gemma":[0.9988366,0.00048365607,0.000004622583,0.000026361597,0.0002458681,0.000016272566,0.000009824843,0.000012387994,0.0003644393],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979927,0.0008068352,0.0007185894,0.0001654018,0.000043560307,0.0002729383],"domain_scores_gemma":[0.9974697,0.0014002918,0.0006430085,0.00026293995,0.00017887517,0.000045172215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013736015,0.00015398182,0.00036678405,0.0002325717,0.00057658984,0.000012135046,0.00021084462,0.00008906367,0.00009498792],"category_scores_gemma":[0.0023180183,0.00008591691,0.00019009442,0.00049747736,0.00014947011,0.00009301843,0.00018722382,0.0003593106,0.000017072778],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001447317,0.00013048138,0.99473065,0.000011823026,0.00026098618,0.0000027347935,0.00063019816,0.00013283112,0.00039513764,0.00009778376,0.0025537612,0.0009088742],"study_design_scores_gemma":[0.0020379075,0.00022967721,0.99469733,0.000007778294,0.0003989742,0.00026757584,0.00037478568,0.000008235625,0.000082570434,0.001391858,0.0004100337,0.000093254006],"about_ca_topic_score_codex":0.00028183812,"about_ca_topic_score_gemma":0.000057645502,"teacher_disagreement_score":0.0031212107,"about_ca_system_score_codex":0.000016600186,"about_ca_system_score_gemma":0.000105741536,"threshold_uncertainty_score":0.44347212},"labels":[],"label_agreement":null},{"id":"W4390193028","doi":"10.1002/alz.078622","title":"A systematic review of drug interventions to enhance cognition in patients with primary central nervous system infections","year":2023,"lang":"en","type":"review","venue":"Alzheimer s & Dementia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College; Public Health Ontario; Toronto Rehabilitation Institute; University of Toronto; University Health Network","funders":"","keywords":"Medicine; Placebo; Randomized controlled trial; Drug; Internal medicine; Relative risk; Pharmacology; Confidence interval; Pathology; Alternative medicine","score_opus":0.022722431045046565,"score_gpt":0.2988411870013849,"score_spread":0.27611875595633834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390193028","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011616468,0.99363655,0.0000382535,0.000007741545,0.0011455613,0.004603087,0.00025762065,0.00010458811,0.000090435584],"genre_scores_gemma":[0.0026043572,0.993301,0.0000231722,0.000024644349,0.00002739966,0.0017183368,0.0021965364,0.00006184172,0.000042714444],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9968875,0.00065243914,0.0016702102,0.00039233465,0.00004503344,0.0003524879],"domain_scores_gemma":[0.9982445,0.00012615942,0.00090877345,0.00044958582,0.00023586015,0.00003510218],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038034606,0.0003835342,0.0021482648,0.0004162133,0.00010866817,0.000020432033,0.00022704717,0.00018733235,0.00013696715],"category_scores_gemma":[0.000066230685,0.0002931076,0.00048367397,0.00088665064,0.00003510468,0.00011041354,0.00013680507,0.00027049074,0.0005990253],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000100998295,0.0004175631,0.000042622367,0.9617726,0.016946519,9.3435307e-7,0.000031176776,2.1900179e-7,0.0000032294686,0.000051290248,0.0011358404,0.019587902],"study_design_scores_gemma":[0.00025027405,0.00017499522,0.00043525072,0.89782995,0.087388486,0.000014865852,0.000013817597,1.9296783e-8,0.000014218755,8.0577536e-7,0.013568948,0.00030836606],"about_ca_topic_score_codex":0.00015545149,"about_ca_topic_score_gemma":0.00017474117,"teacher_disagreement_score":0.07044197,"about_ca_system_score_codex":0.000044132517,"about_ca_system_score_gemma":0.000116754934,"threshold_uncertainty_score":0.9999521},"labels":[],"label_agreement":null},{"id":"W4390658610","doi":"10.1097/inf.0000000000004236","title":"Evaluating the Impact of the BioFire FilmArray in Childhood Meningitis: An Observational Cohort Study","year":2024,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Lumbar puncture; Meningitis; Bacterial meningitis; Microbiological culture; Pediatrics; Cohort; Internal medicine; Cerebrospinal fluid; Bacteria; Biology","score_opus":0.037757906098331045,"score_gpt":0.3490590842923457,"score_spread":0.3113011781940147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390658610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545074,0.0016339803,0.0000055819073,0.00022912712,0.0018903865,0.0006212409,0.000048065343,0.00003925525,0.000081646176],"genre_scores_gemma":[0.99890435,0.00011947661,0.000001502567,0.000017955716,0.00078281487,0.00005241158,0.000009816499,0.000016983451,0.00009467024],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980893,0.0009738303,0.00044359098,0.00017372287,0.000072899544,0.0002466347],"domain_scores_gemma":[0.9989664,0.00035419254,0.00020268609,0.0003136555,0.00012788214,0.000035180088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015700227,0.00016933188,0.00018514504,0.00014395572,0.00080137607,0.00012536212,0.00030281907,0.00006715518,0.00070481346],"category_scores_gemma":[0.0003494463,0.00007265001,0.0002709546,0.0006668809,0.00006485116,0.00020071056,0.00008633536,0.000674102,0.000023914687],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055587083,0.0005101441,0.9934245,0.0000060126945,0.00029592915,0.0000018353368,0.0009127908,0.0016336238,0.0016950491,0.000037868074,0.0006506835,0.00077598373],"study_design_scores_gemma":[0.00060271745,0.0004607592,0.9969948,0.000016884436,0.0004190471,0.0003092968,0.00016211097,0.00017681386,0.0000104444425,0.0007334836,0.000019607729,0.00009405916],"about_ca_topic_score_codex":0.00059057935,"about_ca_topic_score_gemma":0.000064065396,"teacher_disagreement_score":0.0035702826,"about_ca_system_score_codex":0.00010861386,"about_ca_system_score_gemma":0.00058344426,"threshold_uncertainty_score":0.7717213},"labels":[],"label_agreement":null},{"id":"W4390843528","doi":"10.1007/978-1-0716-3565-0_10","title":"New Perspectives on Crosstalks Between Bacterial Regulatory RNAs from Outer Membrane Vesicles and Eukaryotic Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Vesicle; Cell biology; Biology; Bacterial outer membrane; RNA; Microvesicles; Extracellular vesicle; Gene; microRNA; Membrane; Biochemistry","score_opus":0.017584769276088985,"score_gpt":0.3338923761361295,"score_spread":0.3163076068600405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390843528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9032586,0.005797392,0.08752271,0.00028216498,0.0026180164,0.00017664813,0.000076761935,0.000093313814,0.00017437174],"genre_scores_gemma":[0.800704,0.00046070962,0.19614218,0.00013964639,0.0010457761,0.000032529813,0.00024987804,0.00008763378,0.0011376364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99767286,0.0011002577,0.00030609674,0.00060398754,0.0000108927925,0.0003059021],"domain_scores_gemma":[0.9990404,0.00055981387,0.00004963171,0.00029417867,0.000020379719,0.000035594385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004373602,0.00024394829,0.00042695133,0.00022329335,0.00007462537,0.000057281206,0.00014168017,0.0004694327,0.00072569936],"category_scores_gemma":[0.00008118816,0.00020650792,0.00010398421,0.00014601434,0.00019317615,0.00005279604,0.000117643205,0.0003614129,0.000073625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008862331,0.00002059635,0.00050643826,0.000010206928,0.00020605221,0.000010253382,0.00056683243,0.0000012652567,0.94750935,0.003100038,0.0001294883,0.047850866],"study_design_scores_gemma":[0.0007829198,0.00027002883,0.0070879017,0.000047980546,0.00007036109,0.000018758185,0.00017030841,0.000003076647,0.9603319,0.004451673,0.026511228,0.0002538752],"about_ca_topic_score_codex":0.00043908806,"about_ca_topic_score_gemma":0.000018301318,"teacher_disagreement_score":0.108619474,"about_ca_system_score_codex":0.00004148935,"about_ca_system_score_gemma":0.00005390059,"threshold_uncertainty_score":0.84211487},"labels":[],"label_agreement":null},{"id":"W4391023727","doi":"10.1021/acsinfecdis.3c00407","title":"Hfe Permease and <i>Haemophilus influenzae</i> Manganese Homeostasis","year":2024,"lang":"en","type":"article","venue":"ACS Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; National Cancer Institute; National Health and Medical Research Council; Australian Research Council; Medical Research Council; Directorate for Biological Sciences; Australian Synchrotron; Government of Western Australia; University of Melbourne; University of Technology Sydney; Australian Government; University of Queensland; National Computational Infrastructure","keywords":"Haemophilus influenzae; Virulence; Microbiology; Biology; Superoxide dismutase; Manganese; Permease; Reactive oxygen species; Gene; Oxidative stress; Transporter; Chemistry; Cell biology; Biochemistry","score_opus":0.009904988265544333,"score_gpt":0.2501584894372249,"score_spread":0.24025350117168057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391023727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9638173,0.032294903,0.000013404232,0.00022791623,0.0018041454,0.00018211358,0.0002279179,0.0006420137,0.0007902772],"genre_scores_gemma":[0.997486,0.0012411367,0.0000016997395,0.0002583727,0.00020056994,0.000060031718,0.000108872446,0.00003109967,0.0006122095],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990529,0.000086408014,0.00019936776,0.00035644104,0.000018059118,0.0002868659],"domain_scores_gemma":[0.9994519,0.00015747978,0.000032118714,0.0002396952,0.000056969042,0.00006184421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006389205,0.00022136307,0.00022344977,0.00019036305,0.00030831518,0.00014864339,0.0000760881,0.00015634602,0.0007424534],"category_scores_gemma":[0.00009468398,0.000187767,0.00010400811,0.0002546072,0.00015218044,0.00028995684,0.000097468954,0.00018779784,0.00067850424],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048278796,0.0017139339,0.31728336,0.001398317,0.0028592811,0.00025199805,0.001753127,0.000035472433,0.24539582,0.020924384,0.1270152,0.2808863],"study_design_scores_gemma":[0.0025843289,0.0006985419,0.17069797,0.00029328023,0.0009361345,0.0020388053,0.00026676932,0.000011817173,0.010353161,0.0049140165,0.8060512,0.001153954],"about_ca_topic_score_codex":0.00020044942,"about_ca_topic_score_gemma":0.000040354458,"teacher_disagreement_score":0.679036,"about_ca_system_score_codex":0.00003971842,"about_ca_system_score_gemma":0.00006279106,"threshold_uncertainty_score":0.87210256},"labels":[],"label_agreement":null},{"id":"W4391104808","doi":"10.1002/ijgo.15311","title":"The current state of pertussis vaccination in pregnancy around the world, with recommendations for improved care: Consensus statements from the Global Pertussis Initiative","year":2024,"lang":"en","type":"article","venue":"International Journal of Gynecology & Obstetrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Sanofi","keywords":"Consensus conference; Vaccination; Medicine; State (computer science); Political science; Pertussis vaccine; Pregnancy; Virology; Immunization; Immunology; Computer science; Internal medicine","score_opus":0.0286821982138307,"score_gpt":0.34177966502551904,"score_spread":0.3130974668116883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391104808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8509708,0.052687056,0.0022033525,0.056286093,0.03391186,0.0013064748,0.0023467462,0.000026559484,0.00026105723],"genre_scores_gemma":[0.99692625,0.0024617328,0.00010856027,0.00012158665,0.000093398645,0.00005354693,0.0001013437,0.000010074162,0.00012350768],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986527,0.0002961041,0.0006741128,0.00014510355,0.000054392112,0.0001776026],"domain_scores_gemma":[0.9897108,0.008621712,0.000534112,0.0001265351,0.000992957,0.000013877782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032533891,0.00013475344,0.00019748592,0.00017556053,0.00022600008,0.00009527857,0.00041504382,0.000049583698,0.000057036756],"category_scores_gemma":[0.0012382811,0.00006435652,0.000120765326,0.00040726145,0.0001097462,0.00016225305,0.00007140389,0.00036161474,0.000003988928],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000577463,0.00025731936,0.015464566,0.000014925791,0.0018899471,0.000005703415,0.0019868934,0.00008283231,0.00063630403,0.0015830103,0.005607832,0.9718932],"study_design_scores_gemma":[0.0065226634,0.0011534289,0.2146341,0.0006023107,0.00049886474,0.000096859374,0.0037065498,0.0004491699,0.001558793,0.009747185,0.7607264,0.00030364716],"about_ca_topic_score_codex":0.00007313681,"about_ca_topic_score_gemma":0.0024844683,"teacher_disagreement_score":0.97158957,"about_ca_system_score_codex":0.00043557276,"about_ca_system_score_gemma":0.00034930525,"threshold_uncertainty_score":0.2624383},"labels":[],"label_agreement":null},{"id":"W4391142718","doi":"10.20944/preprints202306.0948.v2","title":"A Global Review of Invasive Haemophilus influenzae Disease from 2000–2023: Current Status, Challenges and Future Perspectives","year":2024,"lang":"en","type":"review","venue":"Preprints.org","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Current (fluid); Disease; Burden of disease; Medicine; Environmental health; Intensive care medicine; Biology; Microbiology; Internal medicine; Physics","score_opus":0.11598201170323931,"score_gpt":0.38359091326787353,"score_spread":0.26760890156463424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391142718","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027517646,0.99154747,1.11243715e-7,0.00025445814,0.0020973277,0.00093133963,0.0019156279,0.00007555587,0.00042634865],"genre_scores_gemma":[0.0002704403,0.9984663,0.0000026134862,0.000019536457,0.00045220452,0.00019080997,0.00044810996,0.000030350411,0.00011959433],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976283,0.00044523377,0.00068310363,0.0009019869,0.000034305653,0.0003071244],"domain_scores_gemma":[0.9985255,0.00010285121,0.0003923551,0.00073721766,0.00015375568,0.000088340166],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019425128,0.00052267115,0.0016581784,0.00011764912,0.0000729505,0.000009949113,0.00026942688,0.00035250906,0.0016409014],"category_scores_gemma":[0.00023070564,0.0003947521,0.0005037199,0.00022602447,0.00015388813,0.00009182426,0.0006380087,0.000543137,0.0011903102],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006136603,0.00032979512,0.0014825783,0.15783878,0.0021752773,0.0000093378285,0.00080829515,2.2010394e-8,0.000025963445,0.0020397769,0.0011054056,0.83412343],"study_design_scores_gemma":[0.00018304128,0.000022711063,0.01158778,0.062111117,0.0023817967,0.000024930552,0.00013249871,6.099618e-9,0.000003560523,0.00026812003,0.92296964,0.00031481794],"about_ca_topic_score_codex":0.00015736568,"about_ca_topic_score_gemma":0.000049488477,"teacher_disagreement_score":0.9218642,"about_ca_system_score_codex":0.00017625988,"about_ca_system_score_gemma":0.0005987091,"threshold_uncertainty_score":0.99985045},"labels":[],"label_agreement":null},{"id":"W4391426101","doi":"10.1016/j.jinf.2024.01.010","title":"Distinguishing community-acquired bacterial and viral meningitis: Microbes and biomarkers","year":2024,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Children's Hospital Foundation; Lastentautien Tutkimussäätiö; Turun Yliopisto; Turun Yliopistollinen Keskussairaala; Michael Smith Health Research BC; BC Children’s Hospital Foundation","keywords":"Viral meningitis; Procalcitonin; Bacterial meningitis; Meningitis; Antibiotics; Antibiotic resistance; Biology; Medicine; Antimicrobial; Microbiology; Virology; Immunology; Sepsis; Pediatrics","score_opus":0.013596896440781318,"score_gpt":0.25698398999518735,"score_spread":0.24338709355440602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391426101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99360406,0.0019421494,0.00015448459,0.00011550322,0.0039416514,0.000043395557,0.000007252658,0.000036016056,0.00015549413],"genre_scores_gemma":[0.9992756,0.0003382349,0.00007866258,0.000008290626,0.00021903089,0.0000011512614,0.000010506326,0.000009355859,0.00005911987],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99934256,0.00021108257,0.0002650605,0.00006870287,0.0000092937025,0.00010328647],"domain_scores_gemma":[0.9996205,0.00013332447,0.000113575115,0.000051400668,0.00006310881,0.000018067922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004672152,0.00009398359,0.00016720797,0.00017480458,0.00027911115,0.00016469788,0.00002838324,0.00011314682,0.0000908338],"category_scores_gemma":[0.00012108621,0.00007614996,0.000055321085,0.000077654964,0.00007796192,0.00032628662,0.000045012584,0.00024277151,0.0000048392935],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105765015,0.00003305664,0.006328408,0.00005075324,0.00025087618,0.000002946681,0.00045459237,3.9410133e-7,0.9780962,0.00011501773,0.0011127735,0.013449238],"study_design_scores_gemma":[0.004503122,0.003345291,0.41959766,0.0017141931,0.0007388133,0.019795869,0.00074108253,0.000042306234,0.24313767,0.0017015735,0.30395854,0.0007238955],"about_ca_topic_score_codex":0.00045697807,"about_ca_topic_score_gemma":0.000055929642,"teacher_disagreement_score":0.7349585,"about_ca_system_score_codex":0.000027876154,"about_ca_system_score_gemma":0.000019873825,"threshold_uncertainty_score":0.3105305},"labels":[],"label_agreement":null},{"id":"W4391822786","doi":"10.1128/jb.00325-23","title":"<i>Streptomyces</i> extracellular vesicles are a broad and permissive antimicrobial packaging and delivery system","year":2024,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Temerty Faculty of Medicine, University of Toronto; Canadian Institutes of Health Research; Hospital for Sick Children; University of Toronto","keywords":"Antimicrobial; Biology; Vesicle; Streptomyces; Microbiology; Antimicrobial peptides; Biochemistry; Bacteria; Extracellular vesicle; Membrane; Microvesicles","score_opus":0.009796462321604285,"score_gpt":0.2210818123702185,"score_spread":0.21128535004861423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391822786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776401,0.019620018,0.00005012242,0.000477964,0.0020462538,0.000065185865,0.00002520378,0.00003683639,0.000038301907],"genre_scores_gemma":[0.99842805,0.0010212316,0.00006219581,0.000038355658,0.00025926396,0.0000015044182,0.000006926758,0.000015123212,0.00016733451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989934,0.00017654625,0.0004215752,0.00019463146,0.000010473348,0.00020340548],"domain_scores_gemma":[0.99940777,0.0001327652,0.00023940552,0.000088118024,0.000093658775,0.000038264017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023392412,0.00016139932,0.00041349468,0.00019073751,0.00013263566,0.0000790036,0.000075488206,0.00022024992,0.00008454598],"category_scores_gemma":[0.000025623307,0.00012419203,0.000089351386,0.00006997976,0.00014848776,0.00021148418,0.000068368194,0.00032341687,0.000020383697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001207819,0.000021938538,0.005998453,0.00018464717,0.00023727877,0.000097237535,0.00022036741,5.097129e-7,0.985415,0.00019151566,0.001249298,0.006262999],"study_design_scores_gemma":[0.005364507,0.0019813275,0.26318175,0.004104137,0.0011216325,0.12434967,0.004029729,0.000073652875,0.30447114,0.00014545575,0.28999758,0.001179443],"about_ca_topic_score_codex":0.00003077394,"about_ca_topic_score_gemma":0.000004204023,"teacher_disagreement_score":0.68094385,"about_ca_system_score_codex":0.000029491075,"about_ca_system_score_gemma":0.000054594304,"threshold_uncertainty_score":0.5064404},"labels":[],"label_agreement":null},{"id":"W4391879347","doi":"10.14293/p2199-8442.1.sop-.pf01s9.v1","title":"Neurological Complications in Neonatal and Infant Bacterial Meningitis: A Systematic Review and Meta-Analysis","year":2024,"lang":"en","type":"review","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neonatal meningitis; Meta-analysis; Medicine; Meningitis; Neonatal sepsis; Systematic review; Bacterial meningitis; Intensive care medicine; Pediatrics; Neonatal infection; MEDLINE; Sepsis; Surgery; Internal medicine; Pregnancy; Biology","score_opus":0.07307092786354379,"score_gpt":0.3376505843094417,"score_spread":0.2645796564458979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391879347","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00002304523,0.9975734,0.000010428442,0.0002135575,0.00011618024,0.0016412893,0.00030162025,0.00005799705,0.00006252793],"genre_scores_gemma":[0.00010987271,0.9976515,0.000013728617,0.000089263645,0.000010018329,0.0010384341,0.0004361811,0.000016350914,0.00063463586],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9975874,0.000661032,0.0010153732,0.0005364176,0.000011884021,0.000187926],"domain_scores_gemma":[0.9990789,0.00026311472,0.00023848301,0.00036481925,0.000029913905,0.000024711757],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036209737,0.0003962634,0.00589494,0.00037062514,0.00007282594,0.0000774541,0.00013747385,0.00034410783,0.0012627117],"category_scores_gemma":[0.000078599456,0.00021367683,0.0009353347,0.00055822846,0.0000741139,0.00005569915,0.0002190309,0.00037341833,0.00014163378],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000031723944,0.00003908745,0.0000017047059,0.81872964,0.17643818,0.0000069860675,0.000028541253,1.8530965e-8,0.000007455694,0.002346009,0.0005701764,0.0018290016],"study_design_scores_gemma":[0.00005945448,0.00003831535,0.000006458389,0.00524595,0.7742312,0.0006112101,0.000002256322,3.987066e-7,1.03171494e-7,0.000009842258,0.21959592,0.0001988913],"about_ca_topic_score_codex":0.00012359275,"about_ca_topic_score_gemma":0.00017257195,"teacher_disagreement_score":0.8134837,"about_ca_system_score_codex":0.000010289265,"about_ca_system_score_gemma":0.00002812478,"threshold_uncertainty_score":0.99965024},"labels":[],"label_agreement":null},{"id":"W4392137921","doi":"10.1007/s00253-024-13033-5","title":"Outer membrane vesicles as a platform for the discovery of antibodies to bacterial pathogens","year":2024,"lang":"en","type":"review","venue":"Applied Microbiology and Biotechnology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; National Research Council Canada","funders":"National Research Council Canada","keywords":"Bacterial outer membrane; Periplasmic space; Bacteria; Microbiology; Antigen; Biology; Bacterial cell structure; Vesicle; Antibody; Gram-negative bacteria; Antimicrobial; Chemistry; Escherichia coli; Membrane; Biochemistry; Immunology","score_opus":0.021378614986733272,"score_gpt":0.2736508362600769,"score_spread":0.25227222127334364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392137921","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014155296,0.9782703,0.000093601426,0.0005508831,0.0027940653,0.0019494356,0.001994579,0.00014824842,0.000043605094],"genre_scores_gemma":[0.0046125166,0.9929296,0.00011667642,0.00007715817,0.00022765031,0.00045700715,0.00089279836,0.000059219557,0.00062737317],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979436,0.000054124368,0.0007415172,0.0007363012,0.0000068589693,0.0005176292],"domain_scores_gemma":[0.998655,0.00047357022,0.0002911246,0.0005268769,0.000036787445,0.000016642027],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00026173706,0.0005879378,0.0018156491,0.00041853072,0.00025689192,0.000037565576,0.00046976758,0.0024634004,0.00006217058],"category_scores_gemma":[0.000049823237,0.00033207133,0.00039739773,0.0002776138,0.0007484891,0.000038888058,0.00056003535,0.00059128756,0.0002728749],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014261823,0.000034278273,1.9111697e-7,0.0016695841,0.0010708679,0.0000011981606,0.000047396912,2.065956e-8,0.6996778,0.012329174,0.0015977647,0.2834291],"study_design_scores_gemma":[0.00036751185,0.00030910416,7.0627715e-7,0.0005646298,0.0016016092,0.00071718777,0.000069505935,2.0995042e-8,0.09324826,0.00024957623,0.902533,0.0003388929],"about_ca_topic_score_codex":0.00003240478,"about_ca_topic_score_gemma":0.000053155185,"teacher_disagreement_score":0.90093523,"about_ca_system_score_codex":0.000026787688,"about_ca_system_score_gemma":0.00011382109,"threshold_uncertainty_score":0.99991316},"labels":[],"label_agreement":null},{"id":"W4392361391","doi":"10.1016/j.japh.2024.102060","title":"Pharmacists’ role in maternal immunization","year":2024,"lang":"en","type":"article","venue":"Journal of the American Pharmacists Association","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Immunization; Diphtheria; Vaccination; Tetanus; Family medicine; Pertussis vaccine; Vaccine-preventable diseases; Health care; Environmental health; Immunology; Economic growth; Measles","score_opus":0.007269534193488656,"score_gpt":0.28230844252337656,"score_spread":0.2750389083298879,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392361391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99421537,0.001132689,0.000040264385,0.00062331103,0.0036597466,0.000065156215,0.000013174076,0.000021387716,0.00022889777],"genre_scores_gemma":[0.99761957,0.00066186243,0.000018715884,0.000103543374,0.00022087042,0.000002591082,0.000003474231,0.000012137621,0.0013572497],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99902755,0.00029309874,0.0003950217,0.00007934975,0.000045330868,0.00015965576],"domain_scores_gemma":[0.9990936,0.00010226185,0.0006042428,0.00007423755,0.00011357892,0.000012095285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056683616,0.000091863636,0.00020352159,0.00017070616,0.00007716747,0.00006181536,0.00018920274,0.000041270912,0.00024836874],"category_scores_gemma":[0.00008331569,0.00006325055,0.0001407603,0.00045391824,0.000030254441,0.00022930584,0.000038961363,0.00037600735,0.00007227073],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011949281,0.00006847889,0.106603876,0.000008636702,0.00023435007,0.0000042233073,0.0003010174,0.00005324277,0.8514287,0.000031392137,0.006832197,0.03431438],"study_design_scores_gemma":[0.0033538274,0.00026124276,0.45726088,0.00021941151,0.0003757674,0.0018077776,0.00017611735,0.0005674334,0.38522947,0.0009997869,0.14934137,0.00040692292],"about_ca_topic_score_codex":0.000037810856,"about_ca_topic_score_gemma":0.0000020720101,"teacher_disagreement_score":0.46619925,"about_ca_system_score_codex":0.00036826453,"about_ca_system_score_gemma":0.00006199982,"threshold_uncertainty_score":0.27194634},"labels":[],"label_agreement":null},{"id":"W4392599935","doi":"10.1016/j.vaccine.2024.03.015","title":"Vaccination during pregnancy and modulation of IgG response to pertussis vaccines in infants: The impact of different vaccine formulations","year":2024,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Centre hospitalier universitaire de Québec; Institut National de Santé Publique du Québec; Izaak Walton Killam Health Centre; BC Children's Hospital; Dalhousie University; Université Laval","funders":"Medical Research Council","keywords":"Medicine; Diphtheria; Tetanus; Vaccination; Immunization; Pertussis vaccine; Pregnancy; Booster dose; Whooping cough; Immunology; Antigen; Pediatrics; Biology","score_opus":0.010554021882235833,"score_gpt":0.2775100924537179,"score_spread":0.2669560705714821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392599935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99583733,0.0023819383,0.0001279211,0.00073149434,0.00029181686,0.0005143007,0.000048354483,0.000045847737,0.000021018634],"genre_scores_gemma":[0.99931663,0.00029271073,0.000019756808,0.0000030437507,0.00003576743,0.00003278758,0.00003669856,0.000019427216,0.00024316988],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988111,0.00016430356,0.0005483095,0.00024788172,0.000024018183,0.000204342],"domain_scores_gemma":[0.99913126,0.0003233425,0.000116223186,0.00029249236,0.000114772825,0.000021914779],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019467279,0.0001949581,0.00034318524,0.00058908074,0.00009924383,0.000021007594,0.00010635096,0.00012852366,0.00042100358],"category_scores_gemma":[0.0002068941,0.00011801733,0.00010976878,0.0006294618,0.0000035448554,0.00023477238,0.00009410341,0.00014041028,0.000006999377],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014613473,0.00013828563,0.13274154,0.00009956432,0.00015550831,6.7016026e-7,0.00091135193,0.00034772945,0.85308444,0.00020933567,0.00012150213,0.01072869],"study_design_scores_gemma":[0.0015372585,0.00038332044,0.962912,0.00038090005,0.00004254141,0.00003392411,0.000048515758,0.00063232303,0.03359446,0.0002357058,0.00008013694,0.000118912605],"about_ca_topic_score_codex":0.00053317833,"about_ca_topic_score_gemma":0.00027966435,"teacher_disagreement_score":0.83017045,"about_ca_system_score_codex":0.00006800389,"about_ca_system_score_gemma":0.00003077763,"threshold_uncertainty_score":0.4812607},"labels":[],"label_agreement":null},{"id":"W4393237104","doi":"10.1016/j.jinf.2024.106145","title":"Paediatric meningitis in the conjugate vaccine era and a novel clinical decision model to predict bacterial aetiology","year":2024,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Programme Grants for Applied Research; Meningitis Research Foundation; National Institute for Health and Care Research; Pfizer","keywords":"Neisseria meningitidis; Meningitis; Medicine; Lumbar puncture; Viral meningitis; Streptococcus pneumoniae; Etiology; Encephalitis; Bacterial meningitis; Pediatrics; Enterovirus; Immunology; Internal medicine; Cerebrospinal fluid; Biology; Virus; Antibiotics; Microbiology; Bacteria","score_opus":0.022823948862564614,"score_gpt":0.31251429982619067,"score_spread":0.28969035096362605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393237104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9806361,0.0005487687,0.012774945,0.0006400842,0.005195356,0.00014036066,0.000011248423,0.000018239838,0.00003489657],"genre_scores_gemma":[0.998159,0.0007880037,0.00021549882,0.000081159415,0.0007071274,0.000006674561,0.0000065349236,0.000008497165,0.000027491322],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988536,0.00018473114,0.00065342634,0.00014458857,0.000020641217,0.00014296288],"domain_scores_gemma":[0.9992093,0.00044989536,0.00013587296,0.00008548922,0.00009508703,0.000024351044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013468631,0.00010629252,0.00026175292,0.00034132414,0.00008004938,0.000060268718,0.00006416695,0.00021625099,0.00009697241],"category_scores_gemma":[0.00030914755,0.00006621202,0.00011168425,0.00024398157,0.000021563843,0.0001968899,0.00004071335,0.00048999203,0.000023645905],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029156285,0.0006819303,0.096270725,0.00004928274,0.00043228865,0.000023370418,0.0010049824,0.0020905288,0.7463587,0.001790254,0.027905209,0.12047711],"study_design_scores_gemma":[0.007986069,0.005971766,0.8553145,0.000370293,0.00039611995,0.007865641,0.0000642102,0.002536749,0.002390829,0.0023489578,0.114362106,0.0003927716],"about_ca_topic_score_codex":0.000057912428,"about_ca_topic_score_gemma":0.000080548154,"teacher_disagreement_score":0.75904375,"about_ca_system_score_codex":0.000031068234,"about_ca_system_score_gemma":0.00006766412,"threshold_uncertainty_score":0.2700048},"labels":[],"label_agreement":null},{"id":"W4393386446","doi":"10.3138/jammi-2023-0020","title":"Carriage of <i>Haemophilus influenzae</i> serotype A in children: Canadian Immunization Research Network (CIRN) study","year":2024,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Saskatchewan Hospital; Public Health Agency of Canada; University of Saskatchewan; NOSM University","funders":"Canadian Immunization Research Network; Lakehead University","keywords":"Carriage; Haemophilus influenzae; Serotype; Epidemiology; Indigenous; Medicine; Transmission (telecommunications); Pediatrics; Virology; Biology; Internal medicine; Microbiology; Antibiotics; Pathology","score_opus":0.007459115088781607,"score_gpt":0.2553620874062667,"score_spread":0.2479029723174851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393386446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99225605,0.003648391,0.0000013022719,0.0016911272,0.0020218582,0.0002401697,0.00007769036,0.000004002954,0.000059435195],"genre_scores_gemma":[0.99936515,0.0002478518,5.562612e-7,0.00015199531,0.0001307868,0.0000036954077,0.000016635324,0.0000073878846,0.000075923526],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979114,0.0010251296,0.00058636925,0.000117448566,0.00007892703,0.00028071218],"domain_scores_gemma":[0.998769,0.0003792523,0.0002949208,0.00013068989,0.00034013644,0.00008601331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023277944,0.0000986779,0.0003167538,0.00022407292,0.0001832086,0.000012373734,0.00023105707,0.0002590872,0.00013382295],"category_scores_gemma":[0.0011534345,0.000071170296,0.000075318065,0.00053818733,0.00010558221,0.0000657144,0.00008769008,0.00071729237,0.000001231082],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007415263,0.00012215858,0.97782266,0.000027213455,0.0005072204,0.000005897158,0.00014789127,0.000083366795,0.0038097447,0.00033076532,0.01668785,0.00038110488],"study_design_scores_gemma":[0.0016177205,0.0003052174,0.9812831,0.00028095956,0.0001450961,0.00015379627,0.00013795603,0.0000063561106,0.00033996423,0.00026561753,0.015356851,0.0001073268],"about_ca_topic_score_codex":0.5929118,"about_ca_topic_score_gemma":0.8580794,"teacher_disagreement_score":0.26516756,"about_ca_system_score_codex":0.00045878562,"about_ca_system_score_gemma":0.003106942,"threshold_uncertainty_score":0.5511582},"labels":[],"label_agreement":null},{"id":"W4394104135","doi":"10.6084/m9.figshare.23735573","title":"Genomic epidemiology and multilevel genome typing of <i>Bordetella pertussis</i>","year":2023,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nine Circles Community Health Centre; London Health Sciences Centre; Western University","funders":"","keywords":"Bordetella pertussis; Typing; Genome; Biology; Epidemiology; Genetics; Computational biology; Medicine; Gene; Bacteria","score_opus":0.0694982150449682,"score_gpt":0.299905710352105,"score_spread":0.2304074953071368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394104135","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00060650747,0.004526843,1.13255e-7,0.000034311593,0.00062789157,0.00022439097,0.99390906,0.000051697723,0.00001918717],"genre_scores_gemma":[0.00012982855,0.00065314496,0.000007213831,0.00009576489,0.00015947165,0.000097987286,0.99837434,0.000029099727,0.00045313538],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985393,0.00020099223,0.00048873277,0.0004080789,0.0000068357485,0.00035603959],"domain_scores_gemma":[0.9983184,0.0008029149,0.0003639814,0.00041215355,0.00007415276,0.00002843512],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012831262,0.00028197732,0.0007143625,0.00019128657,0.00013065767,0.000007914937,0.00025956694,0.00084821,0.06288606],"category_scores_gemma":[0.001380316,0.00025041815,0.00012858209,0.000077020755,0.00003216733,0.000030687555,0.00038898375,0.00041675736,0.014731233],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019869207,0.000021923517,0.000011555666,0.00036179682,0.00016130546,0.0000010718895,0.000009709796,0.0000013636802,0.008243835,0.0000010523144,0.9905301,0.0006364637],"study_design_scores_gemma":[0.00030433186,0.0000707207,0.007720651,0.0004824957,0.00005170199,0.000048328726,0.000006780192,0.0000010581754,0.00013352506,0.000010971199,0.99093056,0.00023890502],"about_ca_topic_score_codex":0.00040326588,"about_ca_topic_score_gemma":0.0000892725,"teacher_disagreement_score":0.048154827,"about_ca_system_score_codex":0.000023326282,"about_ca_system_score_gemma":0.000060387796,"threshold_uncertainty_score":0.9999948},"labels":[],"label_agreement":null},{"id":"W4394139871","doi":"10.6084/m9.figshare.21299232","title":"Characterisation of Neisseria meningitidis cc11/ET-15 variant by whole genome sequencing","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Genome; Whole genome sequencing; Genetics; Biology; Neisseria; Computational biology; Gene; Bacteria","score_opus":0.028169752686942922,"score_gpt":0.25425552485578506,"score_spread":0.22608577216884215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394139871","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000986721,0.0010204146,2.0151089e-7,0.000040726136,0.00067090377,0.00027104118,0.99691164,0.000047216134,0.00005113332],"genre_scores_gemma":[0.0005629608,0.00005736394,0.0000018106558,0.00008083186,0.0000812484,0.0002782329,0.99832076,0.00002762802,0.00058916083],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99873495,0.00020504801,0.00041928331,0.00035556522,0.000022572869,0.00026257668],"domain_scores_gemma":[0.9988412,0.00008759079,0.00051328825,0.00044881343,0.00008786391,0.000021224734],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000100059035,0.0002806548,0.00044351112,0.0001495992,0.0002022582,0.00004038561,0.00031815932,0.00041195867,0.8729266],"category_scores_gemma":[0.00020882372,0.0002843196,0.00012861656,0.00015982214,0.00000880815,0.00014913132,0.0002752745,0.0004982131,0.001743466],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020340887,0.000044658897,4.5725074e-7,0.00014222485,0.00011389447,0.0000022671823,0.000039971,0.0000012914701,0.22019355,8.062338e-7,0.7793823,0.000058227022],"study_design_scores_gemma":[0.0003214077,0.00014440354,0.00017366775,0.00023838134,0.000053195126,0.000087918444,0.00003712435,2.259807e-7,0.0023358802,0.0000024425892,0.99632955,0.00027580332],"about_ca_topic_score_codex":0.00039766624,"about_ca_topic_score_gemma":0.000039441984,"teacher_disagreement_score":0.8711831,"about_ca_system_score_codex":0.00011351264,"about_ca_system_score_gemma":0.00017497073,"threshold_uncertainty_score":0.9999609},"labels":[],"label_agreement":null},{"id":"W4394575414","doi":"10.3389/fimmu.2024.1387534","title":"Outer membrane vesicles derived from Bordetella pertussis are potent adjuvant that drive Th1-biased response","year":2024,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Bordetella pertussis; Adjuvant; Bacterial outer membrane; Vesicle; Microbiology; Immunology; Virology; Biology; Medicine; Chemistry; Membrane; Bacteria; Biochemistry; Genetics; Gene","score_opus":0.012262096845407959,"score_gpt":0.22592784036690594,"score_spread":0.21366574352149797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394575414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.928236,0.051812742,0.00068652246,0.0020871484,0.016376764,0.0002808468,0.00014707069,0.000248882,0.00012400972],"genre_scores_gemma":[0.99483675,0.0021909687,0.00055024173,0.00021552578,0.00012398299,0.000055841192,0.00020393386,0.000053154174,0.0017695742],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99745464,0.0008246604,0.00044627354,0.0006568021,0.000026635105,0.000591006],"domain_scores_gemma":[0.99891186,0.00036398604,0.00011459633,0.00052917405,0.000052207062,0.000028161521],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028713132,0.0003654259,0.00070039934,0.00051169406,0.0001343607,0.00005099267,0.00034133732,0.00065727206,0.0014602398],"category_scores_gemma":[0.00013790283,0.00031325195,0.00021944492,0.00020916169,0.00032275345,0.00019249703,0.00017045118,0.0006046596,0.00042106985],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002983643,0.00011402827,0.008055638,0.000016197873,0.0009586686,0.00010048023,0.0016477162,0.000005209775,0.94631624,0.000048895414,0.017976778,0.021776482],"study_design_scores_gemma":[0.0031880573,0.00040823233,0.24521317,0.00030183743,0.00019651203,0.00016972754,0.0038554464,0.00009157594,0.34757504,0.00052980735,0.39774793,0.0007226742],"about_ca_topic_score_codex":0.0007242708,"about_ca_topic_score_gemma":0.00012539892,"teacher_disagreement_score":0.59874123,"about_ca_system_score_codex":0.0002758866,"about_ca_system_score_gemma":0.00013091735,"threshold_uncertainty_score":0.99993193},"labels":[],"label_agreement":null},{"id":"W4394932824","doi":"10.20411/pai.v9i1.659","title":"Invasive and Non-invasive Clinical Haemophilus influenzae Type A Isolates Activate Differentiated HL-60 Cells In Vitro","year":2024,"lang":"en","type":"article","venue":"Pathogens and Immunity","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Immunization Research Network","keywords":"Haemophilus influenzae; In vitro; Microbiology; Haemophilus; Biology; Virology; Medicine; Bacteria; Antibiotics; Genetics","score_opus":0.025106512419596005,"score_gpt":0.2781902834856487,"score_spread":0.25308377106605273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394932824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99472916,0.003407249,0.0000072746884,0.000063296924,0.0012908513,0.00022170474,0.00013225559,0.000058630223,0.000089589375],"genre_scores_gemma":[0.9956269,0.003914912,0.00002409024,0.00006648724,0.000049582894,0.000012837117,0.00011063075,0.000020205196,0.00017433132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868816,0.00032129764,0.00037924264,0.00032037197,0.000010439718,0.00028050088],"domain_scores_gemma":[0.99908495,0.0005055294,0.00006814182,0.0002297275,0.00007177298,0.000039901843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002744585,0.0002222425,0.00039805952,0.00016485217,0.00021760058,0.00007436629,0.00008989438,0.0003255214,0.00013230386],"category_scores_gemma":[0.00015096874,0.00018083196,0.000079327416,0.00023938486,0.0001647319,0.00014683488,0.00021484577,0.00058243424,0.00008776741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029369822,0.00012637477,0.011326667,0.000065735985,0.00016889886,0.000011614401,0.00052971835,4.133873e-7,0.98361623,0.00001458726,0.00010209346,0.003743965],"study_design_scores_gemma":[0.0016877926,0.00055178977,0.3518374,0.00021943678,0.00014076846,0.00011596468,0.00038682515,0.00005458179,0.6400107,0.00027912122,0.004301978,0.0004136318],"about_ca_topic_score_codex":0.0007531371,"about_ca_topic_score_gemma":0.00023143142,"teacher_disagreement_score":0.34360552,"about_ca_system_score_codex":0.000018463126,"about_ca_system_score_gemma":0.00008171957,"threshold_uncertainty_score":0.7374114},"labels":[],"label_agreement":null},{"id":"W4395078091","doi":"10.1016/j.jinf.2024.106163","title":"Temporal variations in the serogroup distribution of invasive meningococcal disease in Quebec, Canada, due to emerging unique clade of serogroup Y strain belonging to the Sequence Type-23 clonal complex","year":2024,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"Université Laval","keywords":"Clade; Meningococcal disease; Biology; Virology; Multilocus sequence typing; Strain (injury); Serotype; Sequence (biology); Microbiology; Phylogenetics; Neisseria meningitidis; Genetics; Genotype; Gene; Bacteria","score_opus":0.021392197226662007,"score_gpt":0.2802418016063709,"score_spread":0.2588496043797089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395078091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923987,0.00009323711,0.002689628,0.003713327,0.000747166,0.0002386508,0.00010447705,0.000006283394,0.000008549869],"genre_scores_gemma":[0.9996402,0.000018468534,0.000032146723,0.000063808904,0.00008805946,0.000011775922,0.000119279604,0.000005960547,0.000020278982],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99885535,0.0003280784,0.0005184141,0.00010092337,0.000047225698,0.0001499779],"domain_scores_gemma":[0.9993164,0.00020470131,0.00018456369,0.00010000607,0.00016658276,0.00002777424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057010143,0.00009930749,0.00019707004,0.0002001318,0.00009388984,0.000026664322,0.00010825047,0.00006716164,0.000048766044],"category_scores_gemma":[0.00019981057,0.00006688163,0.00006792558,0.00075432344,0.0000290175,0.00016811267,0.000031863317,0.0003188199,0.000002062416],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005695143,0.00035771655,0.26997072,0.00015694059,0.0002835128,0.0000489036,0.0039931773,0.013087605,0.69291615,0.008874769,0.005364874,0.004376143],"study_design_scores_gemma":[0.00026893726,0.00018905263,0.9907299,0.00026530327,0.00004217004,0.00009738991,0.00028111954,0.00013367376,0.002154802,0.00015862347,0.0055945674,0.000084430154],"about_ca_topic_score_codex":0.35814428,"about_ca_topic_score_gemma":0.8160959,"teacher_disagreement_score":0.7207592,"about_ca_system_score_codex":0.0002586316,"about_ca_system_score_gemma":0.0005040541,"threshold_uncertainty_score":0.6461299},"labels":[],"label_agreement":null},{"id":"W4395097112","doi":"10.2139/ssrn.4758596","title":"Effect of Oxidative Stress on Antigen Productivity in Bordetella Pertussis Cultures","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bordetella pertussis; Oxidative stress; Productivity; Antigen; Microbiology; Oxidative phosphorylation; Biology; Virology; Immunology; Bacteria; Biochemistry; Economics; Genetics","score_opus":0.006002244079819506,"score_gpt":0.275797349056316,"score_spread":0.26979510497649645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395097112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98117775,0.015386194,0.000014553965,0.00033928474,0.0022028817,0.00038345167,0.00005339016,0.000032379085,0.0004101393],"genre_scores_gemma":[0.9918511,0.006456245,0.000003066376,0.0000037043862,0.00027811644,0.000024798836,0.0000577638,0.000028991728,0.0012962038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99721456,0.00077306177,0.00039740026,0.00044003688,0.000033506403,0.001141411],"domain_scores_gemma":[0.99920493,0.0001323619,0.00028001243,0.00028148483,0.00008564381,0.00001554447],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015918864,0.00035067118,0.0006231688,0.00034467663,0.00010913517,0.000038554015,0.00027573673,0.0005054147,0.00008953335],"category_scores_gemma":[0.00016603833,0.00024061039,0.00027022877,0.00017058608,0.00007907187,0.00004263193,0.000266821,0.005850774,0.000052690793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033736685,0.00109948,0.016816188,0.0008170978,0.005167632,0.000010702102,0.0015818934,0.0005304023,0.8216374,0.015811043,0.00094082335,0.13221368],"study_design_scores_gemma":[0.0020962625,0.0057772063,0.005461926,0.0014704011,0.00042976544,0.00053249666,0.0005392631,0.0000055429546,0.9316314,0.047801502,0.003464952,0.00078929187],"about_ca_topic_score_codex":0.0005454016,"about_ca_topic_score_gemma":0.0014722848,"teacher_disagreement_score":0.13142438,"about_ca_system_score_codex":0.00046240984,"about_ca_system_score_gemma":0.0009250292,"threshold_uncertainty_score":0.9964428},"labels":[],"label_agreement":null},{"id":"W4395693065","doi":"10.1038/s41434-024-00453-1","title":"AAV-vectored expression of monospecific or bispecific monoclonal antibodies protects mice from lethal Pseudomonas aeruginosa pneumonia","year":2024,"lang":"en","type":"article","venue":"Gene Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Government of Canada","keywords":"Pseudomonas aeruginosa; Monoclonal antibody; Biology; Microbiology; Virology; Pathogen; Pneumonia; Cystic fibrosis; Antibiotics; Antibody; Immunology; Medicine; Bacteria","score_opus":0.03192260880352587,"score_gpt":0.2685425019164961,"score_spread":0.23661989311297021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395693065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97951055,0.01665768,0.00015231132,0.00018395894,0.0025766962,0.0004066207,0.00021546418,0.00019786562,0.000098830526],"genre_scores_gemma":[0.9949341,0.0030081405,0.00046576143,0.000015811036,0.00035532695,0.00006117801,0.00016976864,0.000039208255,0.00095075276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986703,0.00016924414,0.0003715238,0.000455248,0.000033083743,0.0003006091],"domain_scores_gemma":[0.9993121,0.00014567291,0.00010103844,0.00034533074,0.00007121285,0.000024625457],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000121962046,0.0002750787,0.00038735545,0.00016228048,0.00016941549,0.00005373798,0.00021154316,0.00026998963,0.0020018406],"category_scores_gemma":[0.000010046498,0.00019239269,0.00015729597,0.00022624039,0.00011369886,0.00013046878,0.000058344278,0.00025472356,0.00024762718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010629102,0.00013990718,0.00057522417,0.0000172373,0.00020499076,0.000010140187,0.00064302393,0.0000043619266,0.98653734,0.00007248559,0.0015523405,0.009180024],"study_design_scores_gemma":[0.0008950174,0.00030815866,0.018240754,0.00009209259,0.000015763893,0.00005912945,0.000082328785,0.000005163769,0.94108695,0.00023578004,0.038753584,0.00022525887],"about_ca_topic_score_codex":0.0003819361,"about_ca_topic_score_gemma":0.000026673657,"teacher_disagreement_score":0.045450382,"about_ca_system_score_codex":0.000028938388,"about_ca_system_score_gemma":0.00007687312,"threshold_uncertainty_score":0.9989105},"labels":[],"label_agreement":null},{"id":"W4396553770","doi":"10.1101/2024.04.30.591261","title":"The Streptococcus pneumoniae transcriptome in patient cerebrospinal fluid identifies novel virulence factors required for meningitis","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Wellcome Trust","keywords":"Streptococcus pneumoniae; Meningitis; Virulence; Cerebrospinal fluid; Transcriptome; Microbiology; Medicine; Virulence factor; Pneumolysin; Bacterial meningitis; Immunology; Biology; Gene; Pathology; Genetics; Antibiotics; Pediatrics; Gene expression","score_opus":0.01729959325853172,"score_gpt":0.23493117690066473,"score_spread":0.217631583642133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396553770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9821322,0.0040223803,0.00016896876,0.00022191404,0.009814714,0.0014596549,0.0018708359,0.00030598723,0.0000033653857],"genre_scores_gemma":[0.9982433,0.00030119414,0.00006754278,0.000017318485,0.00016267566,0.0010647157,0.000003840628,0.000103800536,0.00003565915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99723923,0.00012232157,0.00085633254,0.0009944333,0.000058900656,0.0007287516],"domain_scores_gemma":[0.9983576,0.00017542436,0.00030801067,0.00085452775,0.00024612836,0.00005830952],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00041518616,0.0006018625,0.00059884164,0.0002929016,0.00049256935,0.0003885493,0.0005518161,0.00073237816,0.00005536168],"category_scores_gemma":[0.00014876886,0.0004896358,0.00031514833,0.00035680336,0.0002059126,0.00014006531,0.00042629996,0.00088293076,0.00005874729],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006730854,0.00012654359,0.00197968,0.00023120975,0.000285889,0.0000035660364,0.00006448417,0.0000140186985,0.99598294,0.0008361715,0.000399901,0.000008261928],"study_design_scores_gemma":[0.00091465097,0.00027441842,0.057487745,0.0007824371,0.00020107058,9.8465215e-8,0.00004773889,0.000032874734,0.9096324,0.000022036442,0.029726995,0.0008775741],"about_ca_topic_score_codex":0.00020428427,"about_ca_topic_score_gemma":0.0000808761,"teacher_disagreement_score":0.086350605,"about_ca_system_score_codex":0.00024198032,"about_ca_system_score_gemma":0.00031189114,"threshold_uncertainty_score":0.9997555},"labels":[],"label_agreement":null},{"id":"W4398197335","doi":"10.1097/pec.0000000000003217","title":"Incidence of Bacteremia and Serious Bacterial Infections in Hyperpyrexic Infants Offered Universal Pneumococcal Conjugate Vaccine 13 and Haemophilus influenzae B Immunization","year":2024,"lang":"en","type":"article","venue":"Pediatric Emergency Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Bacteremia; Haemophilus influenzae; Pneumococcal conjugate vaccine; Conjugate vaccine; Pediatrics; Vaccination; Pneumonia; Incidence (geometry); Population; Immunization; Streptococcus pneumoniae; Internal medicine; Immunology; Antibiotics; Antibody; Microbiology","score_opus":0.006614915418860373,"score_gpt":0.2390836906602152,"score_spread":0.23246877524135484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398197335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98680705,0.010066154,0.000007995269,0.000045844972,0.0025138715,0.00027458547,0.00011149497,0.00007838239,0.000094596566],"genre_scores_gemma":[0.99107695,0.008488102,0.000007022917,0.000003663333,0.00017097179,0.000015784033,0.00016141789,0.000020905898,0.000055156597],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988399,0.0001248576,0.00047135568,0.0003160036,0.00002120367,0.00022667326],"domain_scores_gemma":[0.99947804,0.000072071874,0.00009792831,0.00017508486,0.0001436453,0.000033232853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098506825,0.00020755884,0.0003081003,0.0004152346,0.00013137556,0.000021943977,0.00008708793,0.00026024465,0.000535542],"category_scores_gemma":[0.00008751411,0.00020130334,0.00005100194,0.0005826856,0.000040122788,0.0003190908,0.00014778388,0.00025515945,0.000018514593],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011593612,0.00004466952,0.67205215,0.00026605857,0.000059389775,0.0000039327997,0.001523557,0.000011115056,0.3234441,0.000113373964,0.00012886974,0.002236843],"study_design_scores_gemma":[0.0013491166,0.00032171048,0.9919945,0.00005185585,0.00018413903,0.00011255383,0.0002992396,0.000020039612,0.0028175581,0.00007955829,0.0024620092,0.00030771503],"about_ca_topic_score_codex":0.0014872554,"about_ca_topic_score_gemma":0.0012113898,"teacher_disagreement_score":0.32062656,"about_ca_system_score_codex":0.000044837278,"about_ca_system_score_gemma":0.00010098545,"threshold_uncertainty_score":0.8208912},"labels":[],"label_agreement":null},{"id":"W4398255387","doi":"10.1017/cjn.2024.270","title":"Pediatric CNS Inflammation and Infection: A Review of Immunopathology and Radiology","year":2024,"lang":"en","type":"review","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Victoria Hospital; Hospital for Sick Children; London Health Sciences Centre; University of Toronto","funders":"","keywords":"Immunopathology; Medicine; Inflammation; Pathology; Immunology","score_opus":0.03658272104639378,"score_gpt":0.29686875006705865,"score_spread":0.2602860290206649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398255387","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28658697,0.7108741,0.0000013412958,0.00040838018,0.0017477691,0.00018613851,0.000020694455,0.000010004085,0.00016463842],"genre_scores_gemma":[0.01405452,0.98532045,0.000078674515,0.00018355098,0.00032004828,0.000006694924,0.0000020356024,0.000013242711,0.000020760564],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99514246,0.0019697621,0.0015410956,0.00051864627,0.00008395857,0.0007440865],"domain_scores_gemma":[0.9970374,0.0006475291,0.0015111917,0.00013365172,0.00031468907,0.00035552087],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.004081272,0.00044447646,0.0016837023,0.0015948114,0.0011846371,0.00021040064,0.0007424265,0.00056955917,0.00016286371],"category_scores_gemma":[0.0017623915,0.0002687291,0.00036185028,0.0012507321,0.004899504,0.00044032908,0.00012762751,0.0016853258,0.0000068567483],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008982307,0.000090642316,0.12726657,0.028015848,0.00048658779,0.003411692,0.0005665807,0.000019013987,0.00008643759,0.0049571195,0.0073309448,0.82767874],"study_design_scores_gemma":[0.00025935692,0.047608156,0.005205997,0.0066364356,0.0018204089,0.31362498,0.000022818896,0.0000037826228,0.0000062366357,0.0030404385,0.6212026,0.00056880264],"about_ca_topic_score_codex":0.0005994764,"about_ca_topic_score_gemma":0.005067827,"teacher_disagreement_score":0.82710993,"about_ca_system_score_codex":0.000092591596,"about_ca_system_score_gemma":0.0027005917,"threshold_uncertainty_score":0.9999765},"labels":[],"label_agreement":null},{"id":"W4399006917","doi":"10.1016/j.vaccine.2024.05.052","title":"Bordetella pertussis infection following relaxation of COVID-19 non-pharmaceutical interventions in 2021–2023 in Vancouver metropolitan area, British Columbia, Canada","year":2024,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"Provincial Health Services Authority; Deutsche Forschungsgemeinschaft; Michael Smith Health Research BC; Dalhousie University; BC Children’s Hospital Foundation","keywords":"Bordetella pertussis; Metropolitan area; Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Whooping cough; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Psychological intervention; Medicine; Biology; Infectious disease (medical specialty); Bacteria; Outbreak; Vaccination; Internal medicine","score_opus":0.018831265810493058,"score_gpt":0.2991097539156223,"score_spread":0.28027848810512923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399006917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99260104,0.0019845201,0.00024266951,0.0003170318,0.0041275886,0.00025904455,0.00007360273,0.000032214328,0.00036228707],"genre_scores_gemma":[0.99545777,0.0003105603,0.000016622318,0.000049130995,0.000048172198,0.000031971435,0.00011524994,0.000015628055,0.0039548916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987784,0.00012643165,0.00053664297,0.0002798283,0.000025782978,0.00025289325],"domain_scores_gemma":[0.99951756,0.00019350395,0.00007064157,0.00013610347,0.000041255247,0.00004090617],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032240537,0.00010854489,0.00030680627,0.00026083825,0.000095213305,0.00005068298,0.000069785856,0.00016609316,0.0041884785],"category_scores_gemma":[0.00036055062,0.00013205105,0.00016331839,0.00079542573,0.00001009965,0.00014840854,0.000053816937,0.00029692036,0.00001355779],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007387121,0.00035124936,0.8462661,0.00041896518,0.00034499267,0.00007536798,0.0001358455,0.000063566345,0.034015235,0.000045747624,0.106510125,0.011698919],"study_design_scores_gemma":[0.004315199,0.0003017831,0.69821346,0.0010869518,0.0002404216,0.000101108824,0.00070195674,0.00038498593,0.002472007,0.00032441522,0.29138336,0.00047432646],"about_ca_topic_score_codex":0.9725939,"about_ca_topic_score_gemma":0.99847335,"teacher_disagreement_score":0.18487324,"about_ca_system_score_codex":0.00080240594,"about_ca_system_score_gemma":0.00035520506,"threshold_uncertainty_score":0.9967218},"labels":[],"label_agreement":null},{"id":"W4399106480","doi":"10.1101/2024.05.24.592913","title":"The CSF transcriptome in pneumococcal meningitis reveals compartmentalised host inflammatory responses associated with mortality","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Wellcome Trust","keywords":"Transcriptome; Meningitis; Host (biology); Immunology; Medicine; Bacterial meningitis; Biology; Pediatrics; Gene; Genetics; Gene expression","score_opus":0.01762019985094442,"score_gpt":0.24145929774806912,"score_spread":0.2238390978971247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399106480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992041,0.002480955,0.000003448493,0.00031213782,0.0026432183,0.000996461,0.0010586577,0.00044610866,0.000018023244],"genre_scores_gemma":[0.99894905,0.00021383155,0.000014538926,0.000032279288,0.0001195661,0.0005060597,0.0000052287346,0.00010206606,0.00005737406],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99675536,0.000834391,0.0008082288,0.00083311397,0.00007616714,0.00069272117],"domain_scores_gemma":[0.99807763,0.0003115526,0.0003645974,0.0009089148,0.00026561474,0.00007169864],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012559072,0.0006058879,0.0007520284,0.0002850316,0.00040779295,0.00030527805,0.00046460764,0.0007768032,0.00006979427],"category_scores_gemma":[0.00021682035,0.0004676644,0.00019069422,0.0004999387,0.0003431109,0.00011448303,0.00033111867,0.0014443242,0.000097081516],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022931099,0.0001531938,0.045777116,0.00010603919,0.00081609795,0.000043571406,0.000028039438,0.0000033989338,0.95196855,0.000497202,0.00037702484,4.2931774e-7],"study_design_scores_gemma":[0.0010809985,0.00010916255,0.79720175,0.0008121609,0.00025393342,1.5522366e-7,0.000011175946,0.0000055043624,0.19592287,0.000008065611,0.003986332,0.000607866],"about_ca_topic_score_codex":0.00016644648,"about_ca_topic_score_gemma":0.00018398483,"teacher_disagreement_score":0.7560457,"about_ca_system_score_codex":0.00038091204,"about_ca_system_score_gemma":0.00047418216,"threshold_uncertainty_score":0.9997775},"labels":[],"label_agreement":null},{"id":"W4399420944","doi":"10.1016/j.clinmicnews.2024.05.005","title":"Neisseria meningitidis pyelonephritis: A rare and unusual presentation of an established pathogen","year":2024,"lang":"en","type":"article","venue":"Clinical Microbiology Newsletter","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Neisseria meningitidis; Pathogen; Presentation (obstetrics); Microbiology; Neisseria; Medicine; Case presentation; Biology; Bacteria; Genetics; Surgery","score_opus":0.023311040930814993,"score_gpt":0.32047826509436544,"score_spread":0.29716722416355046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399420944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933232,0.0021611168,0.00008603509,0.0011955453,0.0025123826,0.00023479914,0.00025485936,0.00012128373,0.00011078364],"genre_scores_gemma":[0.997184,0.00014632348,0.00027356434,0.0005987759,0.00031479556,0.000025741156,0.0008914022,0.000027447579,0.00053798273],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99799234,0.00051440817,0.00068721734,0.00051697926,0.000004851054,0.00028419998],"domain_scores_gemma":[0.9991087,0.0004216904,0.00010767885,0.0002582191,0.00006652774,0.000037195972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039607217,0.00019462455,0.00043669087,0.00012970039,0.000091452544,0.000047190108,0.00014241876,0.0005501085,0.0008094802],"category_scores_gemma":[0.0001165178,0.0001613356,0.00013584067,0.00014863748,0.0004040186,0.0002493517,0.000114590366,0.00037797468,0.00013744165],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014768788,0.00010612595,0.0051331273,0.000036410485,0.00018618388,0.0000059155577,0.00013532402,2.6508266e-7,0.9682433,0.00022123623,0.012476989,0.013307445],"study_design_scores_gemma":[0.00507377,0.002596491,0.09993732,0.00030628618,0.00047564646,0.0021886653,0.00035400808,0.000026994327,0.15462416,0.0010603197,0.7324128,0.0009435237],"about_ca_topic_score_codex":0.00008027816,"about_ca_topic_score_gemma":0.000038959955,"teacher_disagreement_score":0.81361914,"about_ca_system_score_codex":0.000009300312,"about_ca_system_score_gemma":0.000042845797,"threshold_uncertainty_score":0.8863241},"labels":[],"label_agreement":null},{"id":"W4399671292","doi":"10.1093/jnen/nlae058","title":"Polymicrobial brain abscesses: A complex condition with diagnostic and therapeutic challenges","year":2024,"lang":"en","type":"review","venue":"Journal of Neuropathology & Experimental Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Pathological; Pathogenesis; Intensive care medicine; Pathology","score_opus":0.04902448625756641,"score_gpt":0.33311508191521244,"score_spread":0.28409059565764605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399671292","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060428176,0.9352178,0.0000045309,0.0006891795,0.003142467,0.0003742778,0.00004782059,0.00004744327,0.000048294947],"genre_scores_gemma":[0.07462302,0.92429745,0.000008079866,0.00048804848,0.00035770747,0.000027752481,0.000039936385,0.00010174441,0.000056282664],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967331,0.0012270787,0.0010070655,0.00055342,0.000030795225,0.00044848744],"domain_scores_gemma":[0.99754965,0.0011709777,0.00088806445,0.0002612738,0.00007080488,0.000059200505],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003186968,0.0006167459,0.001960117,0.00055347366,0.00014889053,0.00003998976,0.0003047162,0.00063123275,0.0001695948],"category_scores_gemma":[0.0000797933,0.00041696202,0.0003380553,0.00015275067,0.00058353896,0.00008703061,0.00018808681,0.0013222251,0.00010482252],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002163122,0.0022256093,0.000073356154,0.0061626085,0.0030270729,0.009541492,0.0014009862,9.724066e-7,0.5658715,0.002012997,0.0067137447,0.40080655],"study_design_scores_gemma":[0.001068077,0.0068182047,0.00029595342,0.00075605506,0.0011647766,0.14569621,0.000054183285,7.105586e-8,0.0005095448,0.000032978118,0.84326863,0.00033529277],"about_ca_topic_score_codex":0.0000049267114,"about_ca_topic_score_gemma":0.000007886832,"teacher_disagreement_score":0.8365549,"about_ca_system_score_codex":0.000028773447,"about_ca_system_score_gemma":0.00012330683,"threshold_uncertainty_score":0.9998282},"labels":[],"label_agreement":null},{"id":"W4399765289","doi":"10.1016/j.vaccine.2024.06.030","title":"A phase 3 non-inferiority trial of locally manufactured Meningococcal ACWY vaccine ‘Ingovax ACWY’ among Bangladeshi adults","year":2024,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Impact","funders":"","keywords":"Medicine; Vaccination; Neisseria meningitidis; Meningococcal disease; Seroconversion; Meningococcal vaccine; Meningitis; Adverse effect; Titer; Internal medicine; Immunogenicity; Immunology; Pediatrics; Immunization; Antibody","score_opus":0.009036606726457007,"score_gpt":0.2683196507595456,"score_spread":0.2592830440330886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399765289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99219686,0.0009007188,0.00040654847,0.00042477972,0.0043632,0.00094947475,0.00012778539,0.0002950057,0.00033560285],"genre_scores_gemma":[0.9975534,0.00012638165,0.000063108484,0.00003712811,0.00068659155,0.00006420274,0.00032192585,0.00005221232,0.0010950419],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789953,0.00010874291,0.00083687686,0.0005921681,0.00004370884,0.000518992],"domain_scores_gemma":[0.9989004,0.00014802364,0.00019783454,0.00052972964,0.00015272635,0.00007128742],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00038927462,0.00042027826,0.00077268336,0.0003397491,0.00017164166,0.00006486168,0.0002978883,0.0005265859,0.0034994285],"category_scores_gemma":[0.00011781366,0.0003352711,0.00030776008,0.0004670861,0.000025727926,0.0002854393,0.00016470549,0.00057166314,0.00028186958],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0630391,0.002038654,0.002099528,0.000351059,0.0010443502,0.000031023614,0.0007869408,0.000006082965,0.8684997,0.00027729681,0.02158781,0.040238447],"study_design_scores_gemma":[0.28485543,0.008766575,0.042998478,0.00088386866,0.00064276665,0.00019282152,0.00020394124,0.00027253313,0.45956412,0.0001909389,0.20025271,0.0011758188],"about_ca_topic_score_codex":0.000753184,"about_ca_topic_score_gemma":0.00031131046,"teacher_disagreement_score":0.40893558,"about_ca_system_score_codex":0.00005946153,"about_ca_system_score_gemma":0.00010635069,"threshold_uncertainty_score":0.99990994},"labels":[],"label_agreement":null},{"id":"W4399796916","doi":"10.17504/protocols.io.6qpvr863zlmk/v1","title":"Detection of Bordetella pertussis and Bordetella parapertussis Using the ABI 7500 Real-time PCR System v1","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; Provincial Health Services Authority","funders":"","keywords":"Bordetella bronchiseptica; Insertion sequence; Bordetella pertussis; Bordetella; Microbiology; Polymerase chain reaction; Biology; Multiplex polymerase chain reaction; Sequence (biology); Real-time polymerase chain reaction; Gram-negative bacterial infections; Genetics; Genome; Gene; Bacteria; Transposable element","score_opus":0.01612204166148339,"score_gpt":0.25223321420143635,"score_spread":0.23611117253995295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399796916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98506784,0.0054527414,0.00015314658,0.00020563783,0.0035435979,0.00059479516,0.00010936888,0.0002791553,0.004593723],"genre_scores_gemma":[0.99480844,0.0014821066,0.00009999067,0.000015024564,0.00020059507,0.000050347153,0.000041808777,0.000055676755,0.0032459954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979524,0.0003643923,0.0006781627,0.00063528924,0.00003171888,0.0003380602],"domain_scores_gemma":[0.9985809,0.00025818168,0.00030138931,0.0006743916,0.00015556162,0.000029587402],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003976283,0.00044362698,0.0007257907,0.00025653568,0.00033562328,0.00010698442,0.0002306135,0.00094257906,0.00046769678],"category_scores_gemma":[0.00003961405,0.0002793646,0.000296289,0.00021908495,0.00020038932,0.000038762068,0.00077772065,0.0006680905,0.00013101537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011793479,0.000042157248,0.00014590543,0.0005884492,0.00074160926,0.0000013072146,0.00029360925,0.00003065706,0.98783416,0.0002580966,0.00038010156,0.009566027],"study_design_scores_gemma":[0.0019935244,0.00082306424,0.0050424025,0.002812145,0.0043383255,0.0017877007,0.0033184935,0.007335012,0.90414274,0.0008511804,0.06514028,0.0024151672],"about_ca_topic_score_codex":0.0058509917,"about_ca_topic_score_gemma":0.00018492207,"teacher_disagreement_score":0.08369143,"about_ca_system_score_codex":0.00010095201,"about_ca_system_score_gemma":0.000115206545,"threshold_uncertainty_score":0.99996585},"labels":[],"label_agreement":null},{"id":"W4399796954","doi":"10.17504/protocols.io.36wgqn7zygk5/v1","title":"Detection of Bordetella holmesii and Bordetella bronchiseptica Using the ABI 7500 Real-time PCR System v1","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; Provincial Health Services Authority","funders":"","keywords":"Bordetella bronchiseptica; Bordetella; Bordetella pertussis; Microbiology; Polymerase chain reaction; Biology; Gene; Genetics; Bacteria","score_opus":0.014035671554555708,"score_gpt":0.2514491587155372,"score_spread":0.23741348716098148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399796954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98260736,0.0031743688,0.0001930866,0.00008937634,0.0038736942,0.000615155,0.00008372902,0.00025359594,0.009109643],"genre_scores_gemma":[0.99502915,0.000591329,0.000119582815,0.000007671258,0.00021873953,0.000028382776,0.00003466403,0.00005007064,0.0039204205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825156,0.00028480944,0.00059849897,0.000541039,0.000026066271,0.00029803184],"domain_scores_gemma":[0.99880284,0.00016408505,0.00026790367,0.00062288356,0.000117119875,0.000025176301],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003622968,0.00037366312,0.0006065394,0.00020364713,0.0002598765,0.00008820161,0.0002062425,0.0008094379,0.00039772803],"category_scores_gemma":[0.000026866233,0.00025397874,0.00021707866,0.000159142,0.00019576125,0.00003192614,0.000815022,0.0006972107,0.00018564636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008539641,0.000032136646,0.000051661573,0.0005368137,0.00043260306,0.0000010460388,0.00016484846,0.00002991818,0.9936935,0.0005309017,0.00040071722,0.004040514],"study_design_scores_gemma":[0.0017909673,0.0008336515,0.003122568,0.0021354198,0.0028955308,0.0014416763,0.0015951745,0.002653871,0.93441534,0.0012447159,0.046118185,0.0017528966],"about_ca_topic_score_codex":0.003402457,"about_ca_topic_score_gemma":0.00013686842,"teacher_disagreement_score":0.059278097,"about_ca_system_score_codex":0.00009592446,"about_ca_system_score_gemma":0.00010876639,"threshold_uncertainty_score":0.99999124},"labels":[],"label_agreement":null},{"id":"W4400412871","doi":"10.1016/j.jinf.2024.106225","title":"Vaccine effectiveness and impact of meningococcal vaccines against gonococcal infections: A systematic review and meta-analysis","year":2024,"lang":"en","type":"review","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meta-analysis; Medicine; Meningococcal vaccine; Gonococcal infection; Meningococcal disease; Neisseria meningitidis; Virology; Microbiology; Immunology; Biology; Immunization; Antibody; Bacteria; Sexually transmitted disease; Internal medicine","score_opus":0.04112656666335567,"score_gpt":0.36609512765283536,"score_spread":0.3249685609894797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400412871","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0037298272,0.9942128,0.00009205498,0.000014442794,0.00045877104,0.0013792329,0.000070652786,0.000028930584,0.000013307857],"genre_scores_gemma":[0.006384709,0.99326634,0.000005577517,0.0000071381824,0.000056771598,0.00015264988,0.00003451167,0.000037909107,0.000054366086],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9957839,0.0015276392,0.002119611,0.00032667266,0.000032339416,0.00020981242],"domain_scores_gemma":[0.99626887,0.0006482824,0.002268622,0.00030107854,0.0004648231,0.000048332386],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018800097,0.0006138909,0.009034949,0.0015655211,0.00012049616,0.000069226975,0.00009835853,0.00049873284,0.00018267211],"category_scores_gemma":[0.00044854922,0.0003318971,0.004703945,0.0013857813,0.00004102525,0.000269697,0.000103913284,0.00077305286,0.000015562027],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023514223,0.00016720232,0.00012950215,0.59166354,0.40397066,0.0000020532593,0.000017504011,0.0000054593356,0.00013421538,0.000023117449,0.00018226495,0.0036809545],"study_design_scores_gemma":[0.00034770372,0.0007869505,0.00041659392,0.03717296,0.94882417,0.0023933745,0.000002382976,8.2080186e-7,0.000009161017,0.000018637525,0.009744052,0.00028319584],"about_ca_topic_score_codex":0.00016329596,"about_ca_topic_score_gemma":0.000025531985,"teacher_disagreement_score":0.55449057,"about_ca_system_score_codex":0.00015534397,"about_ca_system_score_gemma":0.00014755072,"threshold_uncertainty_score":0.99991333},"labels":[],"label_agreement":null},{"id":"W4401219577","doi":"10.1542/peds.2024-066588h","title":"Efficacy of Antibiotic Regimens for Meningitis in Young Infants Aged 0–59 Days: A Systematic Review","year":2024,"lang":"en","type":"review","venue":"PEDIATRICS","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"World Health Organization","keywords":"Medicine; Relative risk; Randomized controlled trial; Regimen; Population; Pediatrics; Ampicillin; Confidence interval; Meningitis; Internal medicine; Intensive care medicine; Antibiotics; Environmental health","score_opus":0.03304094407497949,"score_gpt":0.32596736113850444,"score_spread":0.29292641706352496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401219577","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013547699,0.9933948,0.000007963288,0.00000955137,0.0022208188,0.0037003015,0.0003730377,0.00005907974,0.00009897769],"genre_scores_gemma":[0.00016002702,0.99796945,0.000033848934,0.000005670732,0.00015269485,0.00021151373,0.0005837658,0.000057776255,0.0008252246],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99734986,0.00036429949,0.0015296371,0.00040723788,0.00002537644,0.00032357147],"domain_scores_gemma":[0.9978868,0.0007373654,0.0007874403,0.00048888836,0.000080033766,0.000019482195],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008065318,0.00040675592,0.0032698847,0.00051773735,0.00005780036,0.00002309165,0.00027715796,0.0005296029,0.000040976727],"category_scores_gemma":[0.0011485126,0.00029618264,0.00068226375,0.0008746154,0.00003146464,0.000048441383,0.00010950831,0.00042398798,0.00019627016],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059177655,0.0000750818,0.00001199593,0.9906161,0.00029061252,0.0000024710694,0.000044119162,2.9797535e-8,0.000012493444,0.00007296154,0.005317684,0.0035505272],"study_design_scores_gemma":[0.000846518,0.00018392698,0.000015387637,0.8071782,0.0257182,0.00032629786,0.0000116757,2.4734493e-7,0.0000067389133,0.000014556631,0.16510577,0.0005924824],"about_ca_topic_score_codex":0.00006648618,"about_ca_topic_score_gemma":0.000033258508,"teacher_disagreement_score":0.18343791,"about_ca_system_score_codex":0.00007659448,"about_ca_system_score_gemma":0.00018323728,"threshold_uncertainty_score":0.99994904},"labels":[],"label_agreement":null},{"id":"W4402241994","doi":"10.1002/cpz1.70000","title":"Genetic Manipulation of <i>Neisseria gonorrhoeae</i> and Commensal <i>Neisseria</i> Species","year":2024,"lang":"en","type":"article","venue":"Current Protocols","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Neisseria gonorrhoeae; Neisseria; Biology; Transformation (genetics); Microbiology; Plasmid; Complementation; Genetics; Mutant; Gene; Bacteria","score_opus":0.0443509290673131,"score_gpt":0.32068115401188796,"score_spread":0.2763302249445749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402241994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97360367,0.003918858,0.00034130976,0.0001208746,0.0020112465,0.01926305,0.00005701093,0.00016455741,0.0005194204],"genre_scores_gemma":[0.9865781,0.00010834455,0.000050103783,0.00001055179,0.00017173932,0.012536135,0.00006289805,0.00002183816,0.00046030647],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991915,0.00007662619,0.00031745067,0.0002310737,0.0000061969804,0.00017713667],"domain_scores_gemma":[0.9996316,0.000047322173,0.000069699,0.00018468281,0.000048544112,0.000018183799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010358726,0.00015218926,0.00021593983,0.000096482596,0.00008827332,0.000063889565,0.00008793472,0.000100296726,0.0006368304],"category_scores_gemma":[0.000012951032,0.00012780496,0.00005976871,0.00015582354,0.00007828765,0.00012798427,0.00006588575,0.00015125448,0.00010233638],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010592569,0.00012653343,0.017996464,0.0006278738,0.000072567665,1.9786307e-7,0.00020344427,0.0000020614505,0.93742883,0.0052035125,0.006908332,0.03132427],"study_design_scores_gemma":[0.0006894482,0.00025996935,0.05810604,0.00041804163,0.000041413045,0.000058042708,0.000031440413,0.000023509301,0.04430341,0.0004680927,0.89540046,0.00020014506],"about_ca_topic_score_codex":0.000018628787,"about_ca_topic_score_gemma":0.0000075173803,"teacher_disagreement_score":0.8931254,"about_ca_system_score_codex":0.000015041489,"about_ca_system_score_gemma":0.000032851916,"threshold_uncertainty_score":0.69728464},"labels":[],"label_agreement":null},{"id":"W4402274359","doi":"10.7759/cureus.68707","title":"Probable Causative Agents and Demographic Patterns of Encephalitis, Meningitis, and Meningoencephalitis in a Single Tertiary Care Center","year":2024,"lang":"en","type":"article","venue":"Cureus","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Tertiary care; Meningoencephalitis; Encephalitis; Meningitis; Center (category theory); Pediatrics; Single Center; Virology; Family medicine; Internal medicine; Virus","score_opus":0.013598166051626516,"score_gpt":0.25102209015993604,"score_spread":0.23742392410830954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402274359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9827131,0.016193958,0.000019769792,0.00006902478,0.00044386703,0.0001722569,0.00015526297,0.00003390831,0.00019886377],"genre_scores_gemma":[0.9987709,0.0008786258,0.00003691234,0.0000156384,0.000020175037,0.00002994217,0.00008421533,0.00001031702,0.00015331017],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992786,0.000081215905,0.00019542397,0.00024290608,0.000011962065,0.00018988442],"domain_scores_gemma":[0.99978393,0.00004272937,0.00003538006,0.00008880078,0.000031245072,0.000017900966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006118264,0.00011860995,0.00016916111,0.00010518194,0.00005580529,0.000030886204,0.00004627265,0.00011217508,0.00019132251],"category_scores_gemma":[0.000011858121,0.00010560336,0.000029174165,0.00009639158,0.0000784004,0.00015747268,0.00006953469,0.000106721454,0.0000031263526],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016940226,0.000087292094,0.80905366,0.00024821478,0.00015030909,0.000016611953,0.0067265835,2.0661294e-7,0.17656958,0.0010083328,0.00025658667,0.0058656638],"study_design_scores_gemma":[0.0019854063,0.00055817585,0.88855135,0.0015556423,0.00011134655,0.00057403825,0.0039664027,0.0000053405497,0.07128404,0.0007316905,0.030205317,0.00047122219],"about_ca_topic_score_codex":0.0012552681,"about_ca_topic_score_gemma":0.001104011,"teacher_disagreement_score":0.10528554,"about_ca_system_score_codex":0.00002385229,"about_ca_system_score_gemma":0.00001465669,"threshold_uncertainty_score":0.430638},"labels":[],"label_agreement":null},{"id":"W4402343783","doi":"10.1101/2024.09.07.611798","title":"Rational selection of TbpB variants elucidates a bivalent vaccine formulation with broad spectrum coverage against <i>Neisseria gonorrhoeae</i>","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"","keywords":"Neisseria gonorrhoeae; Bivalent (engine); Broad spectrum; Biology; Virology; Computational biology; Microbiology; Chemistry","score_opus":0.007492615538563759,"score_gpt":0.20849159802987735,"score_spread":0.2009989824913136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402343783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99318814,0.0013138654,0.0009371987,0.00020996106,0.002710767,0.0007836105,0.00048084755,0.0003508966,0.000024716182],"genre_scores_gemma":[0.99856156,0.00040168944,0.0003221326,0.000043869197,0.0003715064,0.0001402112,0.000019838617,0.00010298511,0.000036190755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99781656,0.00015191798,0.000710546,0.0008344031,0.000039743813,0.00044683632],"domain_scores_gemma":[0.9983483,0.000059859758,0.0005321,0.0005951263,0.00040806262,0.00005658347],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003289697,0.0005643383,0.0006571949,0.0004636834,0.00021792098,0.00013933946,0.00024347889,0.0006737159,0.00040645598],"category_scores_gemma":[0.000052354404,0.0005096989,0.00016408814,0.00065961387,0.00004128302,0.00020404204,0.00029414787,0.00078291196,0.00016019188],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003464094,0.00023434551,0.007952294,0.0004013883,0.0007624885,0.0000017488096,0.000011121962,0.00030845133,0.9881726,0.0013127429,0.0004900603,0.000006372466],"study_design_scores_gemma":[0.0016075239,0.0003353797,0.16803822,0.00067996874,0.0004171524,5.638844e-7,0.0000025412594,0.00024680712,0.8217936,0.000027270416,0.0060991067,0.0007518733],"about_ca_topic_score_codex":0.00017758025,"about_ca_topic_score_gemma":0.000042817497,"teacher_disagreement_score":0.16637897,"about_ca_system_score_codex":0.00019198233,"about_ca_system_score_gemma":0.00053780957,"threshold_uncertainty_score":0.9997355},"labels":[],"label_agreement":null},{"id":"W4402344558","doi":"10.1101/2024.09.07.611816","title":"Human transferrin and lactoferrin cooperatively support <i>Neisseria meningitidis</i> colonization in the murine nasopharynx","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Lactoferrin; Neisseria meningitidis; Transferrin; Microbiology; Colonization; Biology; Bacteria; Genetics; Biochemistry","score_opus":0.01428893763256085,"score_gpt":0.2392496495578114,"score_spread":0.22496071192525055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402344558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99424595,0.0021643937,0.000023612893,0.0005219216,0.0016569071,0.00083706074,0.00027490256,0.00022958874,0.000045642475],"genre_scores_gemma":[0.9989048,0.0002693076,0.000040398274,0.00013864673,0.00019503088,0.00030900314,0.000006446801,0.0000786405,0.000057678848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978703,0.00035509505,0.00055252167,0.0007595688,0.000035900506,0.0004265647],"domain_scores_gemma":[0.9990677,0.000056573797,0.00012956151,0.0005356146,0.00016743629,0.000043104425],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006051644,0.00049732614,0.0005359752,0.00027453678,0.00031813973,0.00025147392,0.00034761912,0.000628921,0.0003475346],"category_scores_gemma":[0.0000438371,0.000411592,0.00009489369,0.0004369054,0.00015925232,0.000113783586,0.0003087017,0.0011395471,0.00011633169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040246083,0.00016411483,0.0029483957,0.00022530118,0.00016691237,0.00002141841,0.00011369984,0.0000070733804,0.99232566,0.002995838,0.0009896014,0.0000017629254],"study_design_scores_gemma":[0.0027362602,0.00054240716,0.30008495,0.0008084109,0.00045022814,0.0000015848093,0.000042737287,0.000022821252,0.6557088,0.000031759166,0.038072333,0.0014977127],"about_ca_topic_score_codex":0.00024755814,"about_ca_topic_score_gemma":0.00008122729,"teacher_disagreement_score":0.33661684,"about_ca_system_score_codex":0.00009129396,"about_ca_system_score_gemma":0.00023225792,"threshold_uncertainty_score":0.9998336},"labels":[],"label_agreement":null},{"id":"W4402476352","doi":"10.1136/sextrans-2024-056269","title":"Invasive<i>Neisseria meningitidis</i>subtype C in gay, bisexual and other men who have sex with men: a systematic review","year":2024,"lang":"en","type":"review","venue":"Sexually Transmitted Infections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Men who have sex with men; Neisseria meningitidis; Medicine; Chlamydia; Demography; Recreational drug use; Public health; Chlamydia trachomatis; Outbreak; Gonorrhea; Thrush; Homosexuality; Syphilis; Family medicine; Gynecology; Gender studies; Virology; Human immunodeficiency virus (HIV); Internal medicine; Immunology; Biology; Cervical cancer","score_opus":0.032415900758172175,"score_gpt":0.30961278271294734,"score_spread":0.27719688195477515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402476352","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021520485,0.99041456,0.00004108125,0.00007947475,0.00028640163,0.0038633738,0.00027290938,0.00027094892,0.004556048],"genre_scores_gemma":[0.00017337408,0.9871995,0.000008906235,0.000097109274,0.00007925161,0.0018734069,0.00034661472,0.00017199962,0.010049838],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960887,0.0009572159,0.0014108839,0.00091994595,0.000044564615,0.00057871314],"domain_scores_gemma":[0.99834967,0.0004213515,0.00040393474,0.0006513151,0.00009894061,0.00007478539],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005720394,0.0009628219,0.0034686043,0.0007564378,0.00027893452,0.00013371835,0.0002582617,0.00074273616,0.00044713967],"category_scores_gemma":[0.00009166844,0.0006588074,0.00027713747,0.0010655959,0.00017955125,0.00018913728,0.00007208614,0.0011273733,0.0003555113],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021603208,0.0003830474,0.00015657223,0.9783256,0.004061854,0.000015162589,0.0007477222,5.5550004e-7,0.00024660848,0.00043535905,0.009080201,0.0065257004],"study_design_scores_gemma":[0.00091100513,0.0008661636,0.000024160301,0.4351523,0.0123495,0.0022737142,0.0003779972,0.0000024911856,0.000016968279,0.000044753266,0.54679847,0.0011825181],"about_ca_topic_score_codex":0.0007316155,"about_ca_topic_score_gemma":0.0018325358,"teacher_disagreement_score":0.5431733,"about_ca_system_score_codex":0.00012657169,"about_ca_system_score_gemma":0.00046880028,"threshold_uncertainty_score":0.99958634},"labels":[],"label_agreement":null},{"id":"W4402490610","doi":"10.1017/ash.2024.359","title":"An outbreak after all: <i>Cutibacterium acnes</i> among pediatric patients with cerebrospinal fluid diversion device infections highlights gaps in guidelines","year":2024,"lang":"en","type":"article","venue":"Antimicrobial Stewardship & Healthcare Epidemiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"Cincinnati Children's Hospital Medical Center","keywords":"Cerebrospinal fluid; Outbreak; Medicine; Pathology","score_opus":0.027866267083320257,"score_gpt":0.31433457200874154,"score_spread":0.2864683049254213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402490610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.983803,0.0021911499,0.00009136642,0.007047025,0.00530313,0.00074717746,0.00044161372,0.000350642,0.000024918976],"genre_scores_gemma":[0.9928152,0.00095906394,0.0001994678,0.00399663,0.0006457377,0.000093240735,0.0010854432,0.00007554206,0.00012968705],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9946401,0.0014658598,0.0014126261,0.0012199659,0.000045465695,0.0012159558],"domain_scores_gemma":[0.9979941,0.00043458265,0.00029057486,0.0005985379,0.00051170023,0.00017050601],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010142095,0.0006124837,0.0010325443,0.0006127002,0.00034906503,0.000057635112,0.00033782967,0.001016281,0.0004860023],"category_scores_gemma":[0.00019426075,0.00048581528,0.00023038052,0.00071910827,0.00022831323,0.0006466404,0.00019144005,0.0008685175,0.00042332048],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005841842,0.0004551325,0.9800604,0.00032750718,0.0001290653,0.000012862797,0.00040011448,0.000015085508,0.0064878897,0.00021872451,0.010627338,0.0006817149],"study_design_scores_gemma":[0.0013942044,0.0016664286,0.91954726,0.00031221303,0.00018136414,0.00006582949,0.000034710625,0.00001034393,0.0011699994,0.00008036519,0.07487981,0.00065749226],"about_ca_topic_score_codex":0.008147647,"about_ca_topic_score_gemma":0.0046640146,"teacher_disagreement_score":0.06425247,"about_ca_system_score_codex":0.00022406092,"about_ca_system_score_gemma":0.00026130557,"threshold_uncertainty_score":0.9997594},"labels":[],"label_agreement":null},{"id":"W4402498527","doi":"10.1101/2024.09.11.612551","title":"Protection against <i>Neisseria meningitidis</i> nasopharyngeal colonization relies on antibody opsonization and phagocytosis by neutrophils","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Antibody opsonization; Neisseria meningitidis; Microbiology; Phagocytosis; Colonization; Antibody; Neisseriaceae; Neisseria; Immunology; Biology; Opsonin; Bacteria; Antibiotics","score_opus":0.009718888599320881,"score_gpt":0.22321677635283332,"score_spread":0.21349788775351244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402498527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885369,0.0043165283,0.00028519146,0.00044012087,0.004147566,0.0010694518,0.00051264913,0.0006761905,0.00001543344],"genre_scores_gemma":[0.99636716,0.0026108387,0.00007715239,0.00010143848,0.00034090105,0.00030803125,0.000031571926,0.00013504273,0.000027852813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978131,0.00022506146,0.0005078431,0.0009943761,0.000044533506,0.00041509618],"domain_scores_gemma":[0.9987164,0.000040010495,0.00033527848,0.00052652886,0.00031687974,0.00006490231],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027180676,0.00057015306,0.0005351633,0.0005030993,0.0004286109,0.00032462477,0.00019124153,0.0009308551,0.000052054787],"category_scores_gemma":[0.000099302306,0.0005821807,0.000101562095,0.0006731497,0.0001125256,0.0001646863,0.0003465212,0.0008899389,0.00015437775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012221151,0.00014610165,0.00057285087,0.00030484708,0.00025756398,0.0000032207906,0.000015819745,0.000034158977,0.9956378,0.0003327773,0.0025628128,0.000009851249],"study_design_scores_gemma":[0.000829564,0.00030757333,0.0072851246,0.00061696436,0.00023080647,1.9706542e-7,0.0000046242094,0.000106919375,0.9740889,0.0000067984,0.015808703,0.0007138234],"about_ca_topic_score_codex":0.00009730421,"about_ca_topic_score_gemma":0.0000031381755,"teacher_disagreement_score":0.021548882,"about_ca_system_score_codex":0.00015134156,"about_ca_system_score_gemma":0.00015537105,"threshold_uncertainty_score":0.99966294},"labels":[],"label_agreement":null},{"id":"W4402511805","doi":"10.1101/2024.09.08.611931","title":"Meningococcal vaccine Bexsero elicits a robust cellular immune response that targets but is not consistently protective against <i>Neisseria gonorrhoeae</i> during murine vaginal infection","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institutes of Health; University of Toronto","keywords":"Biology; Immunology; Neisseria gonorrhoeae; Immune system; Vaccination; Humoral immunity; Virology; Cellular immunity; Immunization; Neisseria; Microbiology","score_opus":0.013899842650079342,"score_gpt":0.21384519061453097,"score_spread":0.19994534796445163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402511805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98440766,0.004400079,0.00023409426,0.00061935466,0.006350453,0.0021180196,0.00072489347,0.001134267,0.000011196405],"genre_scores_gemma":[0.99715227,0.000491647,0.00021257713,0.00013001893,0.00056224264,0.0010130391,0.000009557711,0.00028296205,0.00014565853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.994909,0.00078405545,0.0011613608,0.0019262533,0.0000715105,0.0011478245],"domain_scores_gemma":[0.9966053,0.00013454008,0.0007897588,0.0015579312,0.0007396582,0.00017283164],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow","research_integrity"],"category_scores_codex":[0.0010927921,0.0013202043,0.0013869045,0.00091337814,0.0007702845,0.00038549682,0.0005276378,0.0016117954,0.0003912691],"category_scores_gemma":[0.00025779745,0.0013557503,0.0005496796,0.0007819629,0.00015679025,0.00027287996,0.0015026997,0.0026969914,0.0006429309],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026791685,0.0003236192,0.0021394095,0.00072288665,0.0013377166,0.000038387,0.000066421235,0.00007381869,0.99227774,0.000043117627,0.00029270677,0.0000050115027],"study_design_scores_gemma":[0.002200692,0.00025086937,0.113149635,0.0008701942,0.00043989302,0.0000017433813,0.000011052817,0.0000367189,0.87281173,0.0000027035414,0.009013597,0.0012111646],"about_ca_topic_score_codex":0.00077462586,"about_ca_topic_score_gemma":0.00001948389,"teacher_disagreement_score":0.119466,"about_ca_system_score_codex":0.0006307767,"about_ca_system_score_gemma":0.0006063346,"threshold_uncertainty_score":0.99995494},"labels":[],"label_agreement":null},{"id":"W4402525772","doi":"10.1101/2024.09.07.611809","title":"Adjuvant-dependent impacts on vaccine-induced humoral responses and protection in preclinical models of nasal and genital colonization by pathogenic Neisseria","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institutes of Health; University of Toronto","keywords":"Meningococcal vaccine; Neisseria meningitidis; Immunology; Vaccination; Adjuvant; Neisseria gonorrhoeae; Biology; Gonorrhea; Microbiology; Antigen; Neisseria; Immunity; Immune system; Virology; Medicine; Immunization; Bacteria","score_opus":0.02874469541843818,"score_gpt":0.26646988344350536,"score_spread":0.23772518802506717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402525772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99374753,0.00327101,0.00003411824,0.00010796649,0.0013454135,0.00096305076,0.00040384827,0.00012568194,0.0000014058652],"genre_scores_gemma":[0.999224,0.00039528095,0.000044471723,0.00001725471,0.00008631093,0.00015762378,0.0000024194692,0.0000638234,0.000008786678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979008,0.00036764052,0.0006335597,0.0007458903,0.000035672587,0.000316477],"domain_scores_gemma":[0.9989775,0.00008995823,0.00030181676,0.00039632508,0.00017302051,0.00006138649],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00054993114,0.00038876937,0.0005897009,0.0003505593,0.000098506614,0.000082926716,0.00012489595,0.0009013203,0.000026956772],"category_scores_gemma":[0.00023541172,0.00037814883,0.000071898015,0.00024149772,0.000051552855,0.00012499066,0.00035628985,0.00085494,0.000012067033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009083015,0.00019074803,0.003702273,0.00023106764,0.00013833136,0.000004545045,0.000026348927,0.000013531164,0.9945806,0.0001446731,0.00004426356,0.000015275851],"study_design_scores_gemma":[0.002294103,0.0010740032,0.2569978,0.00062650983,0.00019044765,8.9157714e-7,0.00000967179,0.00028712748,0.7377335,0.00003809297,0.00011488044,0.00063300907],"about_ca_topic_score_codex":0.0002503806,"about_ca_topic_score_gemma":0.000047768262,"teacher_disagreement_score":0.25684717,"about_ca_system_score_codex":0.00010703505,"about_ca_system_score_gemma":0.00026563206,"threshold_uncertainty_score":0.999867},"labels":[],"label_agreement":null},{"id":"W4402545974","doi":"10.1186/s12934-024-02518-7","title":"Programming Bordetella pertussis lipid A to promote adjuvanticity","year":2024,"lang":"en","type":"article","venue":"Microbial Cell Factories","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Bordetella pertussis; Lipid A; Reactogenicity; Adjuvant; Immune system; Microbiology; Pertussis vaccine; TRIF; Immunization; Biology; Immunology; Toll-like receptor; Innate immune system; Lipopolysaccharide; Bacteria","score_opus":0.011325783562748439,"score_gpt":0.24123326333842435,"score_spread":0.2299074797756759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402545974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98934424,0.0015662304,0.00036252447,0.00044804122,0.0063750814,0.00043195442,0.000098318575,0.00047357613,0.0009000365],"genre_scores_gemma":[0.9917293,0.000053941272,0.00038438282,0.000059318754,0.00036819177,0.000030023235,0.000091257294,0.000038338098,0.0072452133],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987659,0.000063404914,0.00027004114,0.00042490798,0.000015849704,0.00045988816],"domain_scores_gemma":[0.9995689,0.00005147632,0.000032771462,0.00022454342,0.000078479505,0.000043841683],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009520074,0.0002571778,0.00027862724,0.00014542277,0.00027681893,0.00022943986,0.00016202751,0.0002300772,0.0011792891],"category_scores_gemma":[0.00004086822,0.00021110759,0.00014321608,0.0003330914,0.00006911273,0.00014326828,0.00012437253,0.00026818522,0.0015452676],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054262295,0.0000859143,0.00035211543,0.00009203806,0.00006723755,0.000002735162,0.0013385912,6.599564e-7,0.95940906,0.00011646078,0.011059591,0.027421337],"study_design_scores_gemma":[0.00013671396,0.00012935641,0.00031221024,0.000044050325,0.000031985477,0.000023149216,0.00005822428,4.4330218e-7,0.38642067,0.000009556394,0.61265314,0.0001805211],"about_ca_topic_score_codex":0.0003436836,"about_ca_topic_score_gemma":0.00013046215,"teacher_disagreement_score":0.60159355,"about_ca_system_score_codex":0.000054784883,"about_ca_system_score_gemma":0.000076144075,"threshold_uncertainty_score":0.99973375},"labels":[],"label_agreement":null},{"id":"W4402567541","doi":"10.1177/20499361241274206","title":"Public health trends in neurologically relevant infections: a global perspective","year":2024,"lang":"en","type":"review","venue":"Therapeutic Advances in Infectious Disease","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Perspective (graphical); Public health; Medicine; Environmental health; Political science; Computer science; Pathology; Artificial intelligence","score_opus":0.06991044483908655,"score_gpt":0.39074759792382785,"score_spread":0.3208371530847413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402567541","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013076336,0.9916883,0.000078301135,0.0005878847,0.00355072,0.0008446483,0.00022043509,0.00041903195,0.0024799078],"genre_scores_gemma":[0.015279935,0.9831039,0.0000033786876,0.00022656504,0.00015571219,0.0007585508,0.00019782195,0.00006495964,0.00020923145],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955584,0.0013340007,0.001088623,0.0010684349,0.00004548816,0.00090509246],"domain_scores_gemma":[0.998626,0.00021905916,0.0003896709,0.00055212283,0.0000849987,0.0001281431],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004654721,0.00078268006,0.0018048198,0.0012207982,0.00020144289,0.00009985051,0.0003113805,0.0004885537,0.0005234651],"category_scores_gemma":[0.00015616327,0.00060283625,0.00064241246,0.0027735478,0.0001996076,0.0003530462,0.00017218724,0.0012831517,0.00046213425],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046871664,0.00104527,0.0005418513,0.0012632943,0.00024027996,0.000024873738,0.00007288295,0.000009922242,4.6678323e-7,0.019504819,0.00009009025,0.9771594],"study_design_scores_gemma":[0.0007127256,0.00051860034,0.0007972567,0.0015290189,0.00037585438,0.00022825543,0.000032209962,0.000002251962,2.5034106e-8,0.014726068,0.98055077,0.0005269807],"about_ca_topic_score_codex":0.00034227918,"about_ca_topic_score_gemma":0.0019245913,"teacher_disagreement_score":0.98046064,"about_ca_system_score_codex":0.0019509273,"about_ca_system_score_gemma":0.00088265416,"threshold_uncertainty_score":0.9996423},"labels":[],"label_agreement":null},{"id":"W4402581529","doi":"10.1503/cmaj.240259","title":"Invasive meningococcal disease presenting with tenosynovitis","year":2024,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre","funders":"","keywords":"Tenosynovitis; Medicine; Meningococcal disease; Meningococcal Infections; Disease; Computer science; Intensive care medicine; Surgery; Neisseria meningitidis; Pathology","score_opus":0.006129409340709922,"score_gpt":0.2195486105880877,"score_spread":0.21341920124737776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402581529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9721498,0.0012052825,0.000066764915,0.021009224,0.0030734206,0.00009434253,0.000055631215,0.000062134655,0.0022834062],"genre_scores_gemma":[0.9954212,0.00008953306,0.000010919444,0.00067761296,0.00093597244,0.000008279993,0.00003140094,0.000012967231,0.002812153],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991373,0.00012618855,0.00019561988,0.00012728643,0.00007061318,0.00034303727],"domain_scores_gemma":[0.9991865,0.00018201127,0.000055862358,0.00005305715,0.00014451072,0.0003780689],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004278916,0.00008641207,0.00011531816,0.00015148272,0.00033449702,0.00015793293,0.000097325734,0.00021491558,0.009672138],"category_scores_gemma":[0.00069340004,0.00006477463,0.000059735186,0.00016643039,0.000031299103,0.00014880126,0.000012467856,0.00067107193,0.0005222021],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005178741,0.000071061164,0.29646355,0.000057370944,0.0014728972,0.0017327899,0.0008439355,0.0000072742255,0.005259565,0.00339661,0.6515412,0.039101984],"study_design_scores_gemma":[0.0004819772,0.000047762067,0.05272609,0.00013984168,0.0000589088,0.0010452333,0.00012016343,0.00001729554,0.0002011414,0.00014332595,0.94488174,0.00013650498],"about_ca_topic_score_codex":0.0018608868,"about_ca_topic_score_gemma":0.01587595,"teacher_disagreement_score":0.2933406,"about_ca_system_score_codex":0.00027726503,"about_ca_system_score_gemma":0.0023457622,"threshold_uncertainty_score":0.99123317},"labels":[],"label_agreement":null},{"id":"W4402653565","doi":"10.1136/archdischild-2024-327495","title":"Epidemiology, microbiology and antibiotic treatment of bacterial and fungal meningitis among very preterm infants in China: a cross-sectional study","year":2024,"lang":"en","type":"article","venue":"Archives of Disease in Childhood Fetal & Neonatal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital","funders":"National Key Research and Development Program of China; Canadian Institutes of Health Research; China Medical Board","keywords":"Meropenem; Medicine; Meningitis; Epidemiology; Antibiotics; Incidence (geometry); Pediatrics; Lumbar puncture; Vancomycin; Gestational age; Intensive care; Internal medicine; Microbiology; Intensive care medicine; Antibiotic resistance; Biology; Pregnancy; Bacteria; Cerebrospinal fluid","score_opus":0.010027976726018394,"score_gpt":0.2688095315507996,"score_spread":0.2587815548247812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402653565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99159217,0.0064651878,0.000001990689,0.00001781142,0.00055613444,0.000523094,0.00079898944,0.000023002172,0.000021614915],"genre_scores_gemma":[0.9992556,0.00029776533,0.000025266949,0.0000020327664,0.00005481208,0.00002087655,0.00030396972,0.000014921775,0.000024759405],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983079,0.00032020168,0.0005942405,0.0004863255,0.000011910118,0.00027946272],"domain_scores_gemma":[0.9991732,0.000504502,0.00010690486,0.00016015783,0.000008199283,0.000047032212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014626517,0.00023407087,0.0005188255,0.00034404482,0.00006543523,0.000013341557,0.000086834436,0.00012308292,0.000048779133],"category_scores_gemma":[0.0000858797,0.00019758996,0.00011577758,0.00010152741,0.0006105981,0.0001861196,0.00014612265,0.00016759142,0.0000020341454],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012818133,0.00073273986,0.96043026,0.00007040362,0.00027619442,0.00002353692,0.0015514262,0.000007846334,0.030761298,0.000099349076,8.1792155e-7,0.0047643394],"study_design_scores_gemma":[0.0032941645,0.0012465618,0.9930887,0.00014014554,0.000053408243,0.00011848216,0.000058107424,0.000020786087,0.0015049949,0.00029513697,0.000020633563,0.00015882961],"about_ca_topic_score_codex":0.000889772,"about_ca_topic_score_gemma":0.00038056588,"teacher_disagreement_score":0.032658514,"about_ca_system_score_codex":0.000016581025,"about_ca_system_score_gemma":0.000065183944,"threshold_uncertainty_score":0.80574846},"labels":[],"label_agreement":null},{"id":"W4402656881","doi":"10.3389/fped.2024.1414778","title":"Clinical predictors of poor outcome of bacterial meningitis in infants less than 90 days: a systematic review","year":2024,"lang":"en","type":"review","venue":"Frontiers in Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Systematic review; Pediatrics; Cochrane Library; Glasgow Coma Scale; Cohort study; Prospective cohort study; MEDLINE; Meningitis; Meta-analysis; Intensive care medicine; Internal medicine; Surgery","score_opus":0.04315487450181041,"score_gpt":0.34259383273241945,"score_spread":0.29943895823060906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402656881","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020315265,0.9734609,0.0000146373095,0.0000063098396,0.021851253,0.0018878066,0.0006735695,0.000029580815,0.000044423854],"genre_scores_gemma":[0.0002201709,0.9983652,0.00010165089,0.0000053392114,0.00032794874,0.00017877185,0.00043960556,0.000051921903,0.00030938958],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9934862,0.0012032916,0.004430772,0.00048177972,0.000053231946,0.00034468572],"domain_scores_gemma":[0.9973474,0.00039013964,0.0016067433,0.0005413469,0.00008247944,0.000031862957],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001887224,0.0004769997,0.0062111146,0.00096497487,0.000021934808,0.000013238711,0.00051831437,0.0011112953,0.000059283815],"category_scores_gemma":[0.001233988,0.00035604317,0.0008979105,0.0011040458,0.00011381354,0.00008414239,0.00023078435,0.00087680604,0.000030639723],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025768202,0.00017110832,0.022087747,0.9510335,0.00051639666,0.0000071475374,0.0000577481,5.2371036e-8,0.0000010873209,0.000014861886,0.014934205,0.011150413],"study_design_scores_gemma":[0.0015485099,0.00039691894,0.000467897,0.65301174,0.019245064,0.00009873508,0.0001094381,8.1917636e-7,0.0000021020946,0.00003186214,0.3241721,0.0009147952],"about_ca_topic_score_codex":0.00009478252,"about_ca_topic_score_gemma":0.000040308078,"teacher_disagreement_score":0.30923793,"about_ca_system_score_codex":0.00011052727,"about_ca_system_score_gemma":0.0002904682,"threshold_uncertainty_score":0.99988914},"labels":[],"label_agreement":null},{"id":"W4402745207","doi":"10.1016/j.infpip.2024.100402","title":"Nosocomial meningitis diagnostic test characteristics: a systematic review","year":2024,"lang":"en","type":"review","venue":"Infection Prevention in Practice","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; University of Toronto; University Health Network; Ottawa Hospital; Impact; Lakeridge Health; McMaster University","funders":"","keywords":"Meningitis; Medicine; Diagnostic test; Test (biology); Intensive care medicine; Pediatrics; Biology","score_opus":0.028319855893399835,"score_gpt":0.3633914652037566,"score_spread":0.33507160931035673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402745207","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007271057,0.9885808,0.000044969005,0.00009435862,0.0061226357,0.0038245118,0.00010542454,0.00025346997,0.0009665578],"genre_scores_gemma":[0.00006235092,0.9926787,0.000013408295,0.000058286674,0.00020173713,0.003309947,0.00072076893,0.000081861326,0.002872928],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9947227,0.0020722186,0.0021740922,0.0006285347,0.000049386592,0.0003530568],"domain_scores_gemma":[0.9924553,0.005653402,0.0011301525,0.0005353011,0.00019307413,0.000032778047],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0016008333,0.00059684715,0.0026154674,0.0005504377,0.00016479187,0.00016469377,0.00019141308,0.0007285626,0.0009562831],"category_scores_gemma":[0.019779637,0.0004908016,0.00076217524,0.00087495596,0.000047122405,0.0005866872,0.00014845634,0.0013207645,0.008497347],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000056534764,0.0005162849,0.000008285479,0.93630064,0.0009965264,0.000018470471,0.000026985546,3.6151917e-8,0.000015811971,0.0002751362,0.0051556583,0.05668049],"study_design_scores_gemma":[0.00014784411,0.000104060055,0.0000046856703,0.4255866,0.011642615,0.0015778188,0.0000036859628,1.03785325e-7,0.0000011717767,0.000018278806,0.5606421,0.0002709821],"about_ca_topic_score_codex":0.00015766361,"about_ca_topic_score_gemma":0.00004082167,"teacher_disagreement_score":0.5554865,"about_ca_system_score_codex":0.0003390362,"about_ca_system_score_gemma":0.0002543416,"threshold_uncertainty_score":0.99995697},"labels":[],"label_agreement":null},{"id":"W4402856141","doi":"10.1159/000540582","title":"The Study of Pro-Inflammatory Molecules Induced by Genetically and Phenotypically Diverse Strains of Haemophilus influenzae Type a in an in vitro Infection Model","year":2024,"lang":"en","type":"article","venue":"Immune system","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University; NOSM University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Immunization Research Network","keywords":"Haemophilus influenzae; Biology; Innate immune system; Pathogenesis; Immune system; Immunology; TLR2; Pathogen; Tumor necrosis factor alpha; Inflammation; Cytokine; Microbiology","score_opus":0.01964659658296419,"score_gpt":0.2646496641915121,"score_spread":0.2450030676085479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402856141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750113,0.0014990413,0.00002371151,0.000012280652,0.00033248178,0.00054682454,0.00001273658,0.000033260523,0.000038542654],"genre_scores_gemma":[0.9998836,0.000026359023,0.000008979549,0.0000014745655,0.000008795649,0.00003632943,0.000008398654,0.000011872021,0.000014200278],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988883,0.00026316807,0.00049730245,0.0001827419,0.000021839953,0.00014663457],"domain_scores_gemma":[0.9995726,0.000046099554,0.00008726488,0.0002072427,0.00007600683,0.00001081381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030911787,0.00011826285,0.00025958958,0.00013874331,0.00006154552,0.000020570895,0.00009209735,0.00015073946,0.000003265119],"category_scores_gemma":[0.000027659713,0.000087677,0.00002894659,0.00020083717,0.00005981184,0.00008592695,0.000071310824,0.00015497515,0.0000034264363],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003180005,0.0002213134,0.003336676,0.00010863317,0.000078507546,0.0000013902612,0.0013491262,0.00012655716,0.990619,0.0006029004,0.0000032128958,0.0032346942],"study_design_scores_gemma":[0.0077106543,0.0039724684,0.528164,0.00080943323,0.00021569077,0.00007197053,0.009237378,0.009537264,0.43912667,0.00020069172,0.00025882453,0.0006949002],"about_ca_topic_score_codex":0.00078785425,"about_ca_topic_score_gemma":0.000602754,"teacher_disagreement_score":0.55149233,"about_ca_system_score_codex":0.000037047557,"about_ca_system_score_gemma":0.000062006,"threshold_uncertainty_score":0.3575364},"labels":[],"label_agreement":null},{"id":"W4402897632","doi":"10.1093/ofid/ofae565","title":"Computed Tomography of the Head Before Lumbar Puncture in Adults With Suspected Meningitis in High–HIV Prevalence Settings","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Medical Research Council; Government of the United Kingdom; Department of Health and Social Care; London School of Hygiene and Tropical Medicine; National Institute for Health and Care Research; University of Pennsylvania","keywords":"Medicine; Lumbar puncture; Logistic regression; Observational study; Computed tomography; Lumbar; Meningitis; Human immunodeficiency virus (HIV); Pediatrics; Internal medicine; Emergency medicine; Radiology; Cerebrospinal fluid","score_opus":0.0032777584759652993,"score_gpt":0.21844478715577828,"score_spread":0.215167028679813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402897632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99548095,0.0015676111,0.000008469085,0.0005358308,0.0006246426,0.0008807908,0.00035139284,0.000104466075,0.0004458369],"genre_scores_gemma":[0.9993379,0.000040154733,0.000008660998,0.000057493922,0.00002074059,0.00012172755,0.00015364877,0.000022177459,0.00023751],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988402,0.000155834,0.00030145823,0.0003607126,0.000027565395,0.0003141909],"domain_scores_gemma":[0.9994698,0.00006020245,0.00009449786,0.00028178724,0.00007047322,0.000023236731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000824009,0.00021137558,0.0003151604,0.00022895135,0.00014760012,0.00008963691,0.00031055065,0.00013548302,0.00040298112],"category_scores_gemma":[0.00003598685,0.00013512453,0.00009955387,0.0009981897,0.00013655302,0.0002750507,0.00024036538,0.00026427358,0.000017141894],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019903216,0.00038352085,0.9887051,0.00027047415,0.00014221822,0.00000827201,0.0004453093,0.0000495058,0.0037841182,0.0016998422,0.0025828434,0.0017297455],"study_design_scores_gemma":[0.001966168,0.00039926928,0.991111,0.0017211281,0.000064497246,0.000074491916,0.00011921845,0.000017809187,0.001997512,0.0006977504,0.001642053,0.00018912302],"about_ca_topic_score_codex":0.002491207,"about_ca_topic_score_gemma":0.013033713,"teacher_disagreement_score":0.010542505,"about_ca_system_score_codex":0.000051595453,"about_ca_system_score_gemma":0.00009737032,"threshold_uncertainty_score":0.7273118},"labels":[],"label_agreement":null},{"id":"W4402978044","doi":"10.1371/journal.pone.0311362","title":"Seroprevalence of Bordetella pertussis infection in children 1–14 years old: Indonesia basic health research (Riskesdas) 2013 and 2018 data","year":2024,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"Universitas Trisakti","keywords":"Bordetella pertussis; Medicine; Whooping cough; Seroprevalence; Pneumonia; Pertussis vaccine; Pertussis toxin; Vaccination; Pediatrics; Serology; Immunology; Internal medicine; Immunization; Antibody; Biology","score_opus":0.10537375758195038,"score_gpt":0.3317287391120388,"score_spread":0.22635498153008843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402978044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99255586,0.0060758493,0.0000030605481,0.00064410846,0.0001927074,0.00032934148,0.0001285652,0.0000455995,0.000024886984],"genre_scores_gemma":[0.98177505,0.01738502,0.00004616927,0.000016734937,0.000069232774,0.000017022336,0.00016577622,0.000015608837,0.00050937827],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987556,0.00033311045,0.00025667588,0.00035507663,0.000039090613,0.00026046345],"domain_scores_gemma":[0.9993228,0.00012452179,0.000044928023,0.0004256484,0.000058057405,0.00002406744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007346483,0.00009500809,0.00024380961,0.00034056773,0.00009235557,0.000029491417,0.0001512825,0.00015456839,0.00024871886],"category_scores_gemma":[0.00007834584,0.0000803473,0.000018762981,0.00041594356,0.000115893046,0.00019313021,0.00023305284,0.00039697066,0.00013472234],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008470952,0.0010500022,0.78862786,0.00047618098,0.00044324304,8.9008904e-7,0.0006402923,0.0000010967336,0.18592037,0.00009136402,0.008491017,0.014172989],"study_design_scores_gemma":[0.0004875446,0.00034882477,0.9913601,0.00057991635,0.000044427223,0.000023810873,0.000027799295,0.000058068385,0.005481337,0.000044063723,0.001427449,0.00011663929],"about_ca_topic_score_codex":0.0066348696,"about_ca_topic_score_gemma":0.0008258729,"teacher_disagreement_score":0.20273228,"about_ca_system_score_codex":0.00003665787,"about_ca_system_score_gemma":0.000079074714,"threshold_uncertainty_score":0.99998003},"labels":[],"label_agreement":null},{"id":"W4403215987","doi":"10.21203/rs.3.rs-5184548/v1","title":"Evaluation of the Performance of a Biofire FilmArray Meningitis/Encephalitis Multiplex Real-Time PCR Assay for Bacterial Meningitis Diagnosis at a Tertiary Care Hospital","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Defence Medical Centre","funders":"","keywords":"Procalcitonin; Meningitis; Multiplex; Encephalitis; Multiplex polymerase chain reaction; Medicine; Cerebrospinal fluid; Viral meningitis; Bacterial meningitis; Microbiology; Virology; Internal medicine; Polymerase chain reaction; Biology; Pediatrics; Bioinformatics; Sepsis; Virus","score_opus":0.037845191187350816,"score_gpt":0.34485551081203114,"score_spread":0.30701031962468034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403215987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851627,0.0029986964,9.199554e-7,0.0002806864,0.0026586421,0.003263603,0.005287145,0.000058042446,0.00028959056],"genre_scores_gemma":[0.99321,0.0007534671,0.00006068242,0.0000010277765,0.00026130452,0.0029222143,0.001908502,0.000059126276,0.0008236809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99600226,0.0016939875,0.0007031605,0.0007008137,0.00031000367,0.00058978214],"domain_scores_gemma":[0.9955697,0.0007719032,0.00034089028,0.00080637424,0.002470657,0.000040495644],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0029117286,0.00034546657,0.00060139375,0.0003414628,0.00045603517,0.000064531894,0.00054780574,0.0007803601,0.0023411],"category_scores_gemma":[0.0010484053,0.00026516174,0.00048524138,0.00031496582,0.00039031403,0.00008909263,0.0017785764,0.0007313774,0.00006543814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002589004,0.00023640989,0.027747914,0.0030997738,0.000867454,0.0000011175939,0.004533622,0.00005329901,0.9335594,0.00003617345,0.008759558,0.020846384],"study_design_scores_gemma":[0.0025813675,0.0012342226,0.11597764,0.0052723675,0.0006892117,0.000021971307,0.00094903586,0.00064473867,0.8674926,0.00020412974,0.004362108,0.0005706092],"about_ca_topic_score_codex":0.0021736678,"about_ca_topic_score_gemma":0.00023676868,"teacher_disagreement_score":0.088229716,"about_ca_system_score_codex":0.0005297497,"about_ca_system_score_gemma":0.00076457346,"threshold_uncertainty_score":0.99998003},"labels":[],"label_agreement":null},{"id":"W4403232739","doi":"10.23736/s0026-4806.24.09097-9","title":"Acute infections of the central nervous system in children and adults: diagnosis and management","year":2024,"lang":"en","type":"review","venue":"Minerva Medica","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Central nervous system; Medicine; Pediatrics; Nervous system; Intensive care medicine; Internal medicine; Psychiatry","score_opus":0.009643029556063835,"score_gpt":0.25575172150998865,"score_spread":0.24610869195392482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403232739","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020668864,0.97671986,6.7355484e-7,0.00006920599,0.0013933822,0.0007795929,0.00020933112,0.00003207047,0.00012703969],"genre_scores_gemma":[0.003507387,0.99568725,0.0000035197943,0.0000071755167,0.00007237295,0.0002658797,0.000094939736,0.000017342858,0.0003441117],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989807,0.00013850855,0.00040157838,0.0002669391,0.000016385036,0.00019588912],"domain_scores_gemma":[0.9995721,0.000051812305,0.0001266256,0.00021618616,0.000011850041,0.000021433429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102252896,0.00021966266,0.00068937975,0.00016763371,0.00006670781,0.000013773685,0.0001241683,0.0002884219,0.00004051386],"category_scores_gemma":[0.000015171797,0.00012371092,0.00014110758,0.0002650346,0.000112367976,0.000024768473,0.00023843438,0.00027981904,0.000015087557],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004752414,0.00009288429,0.002510711,0.0109314,0.0015657411,0.000003986882,0.00009011022,2.3558215e-8,0.0000056800873,0.0003535561,0.0059105856,0.9785306],"study_design_scores_gemma":[0.00046811454,0.000070412265,0.012404446,0.02349731,0.0033121954,0.00084855483,0.000035741785,3.5620695e-7,0.0000034752668,0.0000026412063,0.95918864,0.00016810454],"about_ca_topic_score_codex":0.000578348,"about_ca_topic_score_gemma":0.00018074963,"teacher_disagreement_score":0.97836244,"about_ca_system_score_codex":0.000038503687,"about_ca_system_score_gemma":0.000030261173,"threshold_uncertainty_score":0.5044785},"labels":[],"label_agreement":null},{"id":"W4403508864","doi":"10.1007/s15010-024-02414-7","title":"Bibliometrics analysis and knowledge mapping of pertussis vaccine research: trends from 1994 to 2023","year":2024,"lang":"en","type":"article","venue":"Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Key Research and Development Program of China; Xiangya Hospital, Central South University; National Health Commission of the People's Republic of China; Natural Science Foundation of Hunan Province","keywords":"Bibliometrics; Bordetella pertussis; Whooping cough; Medicine; Geography; Virology; Library science; Vaccination; Biology; Computer science","score_opus":0.08905270244747797,"score_gpt":0.3747627230406404,"score_spread":0.2857100205931624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403508864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99225086,0.0035269072,0.0012523856,0.00018317564,0.0013080396,0.00006305895,0.00006679092,0.000081005084,0.0012677585],"genre_scores_gemma":[0.9968198,0.00065698975,0.00002980208,0.0000054367188,0.00013522581,0.000018895234,0.00010600116,0.0000093434855,0.0022184898],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99912506,0.00017131306,0.0002312775,0.00027103766,0.000020351828,0.00018097705],"domain_scores_gemma":[0.9993132,0.00035253854,0.000029715855,0.00016612289,0.00011175214,0.00002671997],"candidate_categories":["bibliometrics","insufficient_payload"],"consensus_categories":["bibliometrics"],"category_scores_codex":[0.0005112479,0.00009627081,0.00023334385,0.020162484,0.0001465259,0.00006240462,0.00004777891,0.00016866697,0.0014920974],"category_scores_gemma":[0.00012083056,0.000081463935,0.00010726572,0.033426188,0.000025340827,0.000121623714,0.00009371764,0.00020394033,0.00018627835],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004506669,0.00013434967,0.095688716,0.0000423675,0.001539368,7.838147e-7,0.0007603324,0.0000082903125,0.64755696,0.00014760476,0.016167099,0.23790906],"study_design_scores_gemma":[0.0002525929,0.00021439223,0.7076416,0.000051058112,0.00022722778,0.000007638103,0.00006451651,0.00008027144,0.02034841,0.00009651812,0.2708979,0.000117873264],"about_ca_topic_score_codex":0.009443333,"about_ca_topic_score_gemma":0.0019596226,"teacher_disagreement_score":0.62720853,"about_ca_system_score_codex":0.000042126492,"about_ca_system_score_gemma":0.000020662153,"threshold_uncertainty_score":0.9994207},"labels":[],"label_agreement":null},{"id":"W4403580587","doi":"10.1093/pch/pxae057","title":"Etiology of community-acquired bacterial meningitis in children at a tertiary-care centre in Montreal, Canada","year":2024,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Université de Sherbrooke","funders":"","keywords":"Neisseria meningitidis; Streptococcus pneumoniae; Etiology; Serotype; Meningitis; Medicine; Haemophilus influenzae; Pediatrics; Vaccination; Group B; Cohort; Retrospective cohort study; Streptococcus; Immunology; Internal medicine; Antibiotics; Microbiology; Biology; Bacteria","score_opus":0.006377484278179222,"score_gpt":0.2293532958169761,"score_spread":0.2229758115387969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403580587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852626,0.010217121,0.0000013619074,0.0016792127,0.0016571751,0.00038476297,0.00057973573,0.000040297167,0.00017774607],"genre_scores_gemma":[0.9965555,0.0014983672,0.000008222914,0.0001730987,0.00015363163,0.000015512447,0.001517176,0.000020356105,0.00005812794],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979206,0.0007372364,0.00060712325,0.0002260781,0.00002371123,0.0004852763],"domain_scores_gemma":[0.99933034,0.00020017795,0.00012971005,0.00025968277,0.000036569414,0.00004351233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031082623,0.00019518363,0.00044368824,0.0003166568,0.00021883092,0.000011702807,0.00017927818,0.00023379333,0.00038604977],"category_scores_gemma":[0.00004939381,0.00018711569,0.000066755674,0.00039764034,0.000047948364,0.00006076599,0.00015285077,0.00047784878,0.000021910424],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013974454,0.00021544789,0.9620263,0.0002685955,0.00010092595,0.0000049579235,0.0059171612,0.000019524858,0.0039594704,0.00013171615,0.016125506,0.011090652],"study_design_scores_gemma":[0.001437269,0.00012011166,0.98814756,0.00008392463,0.000018842185,0.00006900959,0.00039207892,0.000002005101,0.00051638676,0.000026440104,0.00901975,0.00016663823],"about_ca_topic_score_codex":0.82972115,"about_ca_topic_score_gemma":0.94260657,"teacher_disagreement_score":0.112885445,"about_ca_system_score_codex":0.00047454707,"about_ca_system_score_gemma":0.00047997784,"threshold_uncertainty_score":0.76303566},"labels":[],"label_agreement":null},{"id":"W4403679538","doi":"10.1093/pch/pxae067.042","title":"43 Etiology of community-acquired bacterial meningitis in children seen in the emergency department in Canada","year":2024,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Etiology; Emergency department; Bacterial meningitis; Meningitis; Medicine; Pediatrics; Medical emergency; Intensive care medicine; Internal medicine; Psychiatry","score_opus":0.01232221559452589,"score_gpt":0.25662862182913165,"score_spread":0.24430640623460576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403679538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898712,0.0051032896,0.0000026389212,0.0022920577,0.0018694467,0.0004591796,0.00023421702,0.000015012279,0.00015297264],"genre_scores_gemma":[0.996217,0.0028255708,0.0000067877595,0.0001617187,0.00012982367,0.000046460795,0.00059181004,0.000011880983,0.0000089603955],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974743,0.0012380258,0.000688855,0.00016550066,0.000025449579,0.00040785666],"domain_scores_gemma":[0.9994018,0.00020570614,0.000115125666,0.0002394294,0.000017371964,0.000020578098],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097337435,0.00014956077,0.00035571368,0.00028549824,0.00013672333,0.000007314057,0.00023833325,0.00013289736,0.00027822104],"category_scores_gemma":[0.000050058436,0.00012029939,0.000047880236,0.00064830465,0.00002695631,0.00005239024,0.00007859395,0.0005544319,0.000010726968],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008465826,0.00031357302,0.98141783,0.0001061735,0.00006105702,0.0000031946865,0.0032929308,0.000029725144,0.0011259838,0.00078696496,0.007023356,0.0057545514],"study_design_scores_gemma":[0.0007836983,0.00016595644,0.99134815,0.00002863715,0.000010151735,0.00004517827,0.00027337583,0.000002170019,0.00008651115,0.000118264834,0.0070289527,0.000108958404],"about_ca_topic_score_codex":0.8623121,"about_ca_topic_score_gemma":0.9247308,"teacher_disagreement_score":0.062418696,"about_ca_system_score_codex":0.00031218797,"about_ca_system_score_gemma":0.0007158852,"threshold_uncertainty_score":0.49056667},"labels":[],"label_agreement":null},{"id":"W4403954504","doi":"10.1093/ofid/ofae638","title":"4CMenB Breadth of Immune Response, Immunogenicity, and Safety: Results From a Phase 3 Randomized, Controlled, Observer Blind Study in Adolescents and Young Adults","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Nova Scotia Health Authority; Dalhousie University","funders":"","keywords":"Medicine; Immunogenicity; Randomized controlled trial; Immune system; Antibody response; Immunology; Internal medicine","score_opus":0.010751819791542123,"score_gpt":0.28336732160050576,"score_spread":0.27261550180896366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403954504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9784173,0.014928664,0.000006247642,0.00013375787,0.0010736076,0.004010778,0.0011580351,0.00006689382,0.0002047451],"genre_scores_gemma":[0.9982116,0.00086473033,0.000002157924,0.000024394521,0.000024180608,0.00031306225,0.00021448663,0.0000294094,0.00031594775],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.996724,0.0012035568,0.0011471158,0.00056939677,0.000038293365,0.00031764974],"domain_scores_gemma":[0.9984638,0.0007610371,0.00026381327,0.00036450007,0.000097046206,0.000049789152],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011277274,0.00032767572,0.0014551545,0.00028814856,0.00023764302,0.00023347615,0.00020518986,0.00017127216,0.00016296888],"category_scores_gemma":[0.00068015157,0.0002532796,0.000231082,0.0002688591,0.000206454,0.00040847645,0.00050369196,0.0002321309,0.000022004415],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9070416,0.0027316364,0.07206323,0.000047398753,0.0015222513,0.000017470888,0.00095115486,0.0000024515011,0.01107128,0.000095107884,0.00014493341,0.0043114536],"study_design_scores_gemma":[0.7974516,0.0012003101,0.1971948,0.0008509537,0.0007507095,0.00005725872,0.0010188187,0.00005007672,0.00039012847,0.0003068248,0.00038995975,0.00033855185],"about_ca_topic_score_codex":0.016136456,"about_ca_topic_score_gemma":0.0026773582,"teacher_disagreement_score":0.12513158,"about_ca_system_score_codex":0.000048912054,"about_ca_system_score_gemma":0.00011416727,"threshold_uncertainty_score":0.99999195},"labels":[],"label_agreement":null},{"id":"W4404095814","doi":"10.1016/s1473-3099(24)00576-0","title":"Safety and immunogenicity of a pentavalent meningococcal conjugate vaccine versus a quadrivalent meningococcal conjugate vaccine in adults in India: an observer-blind, randomised, active-controlled, phase 2/3 study","year":2024,"lang":"en","type":"article","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nexen (Canada)","funders":"Serum Institute of India","keywords":"Immunogenicity; Conjugate; Medicine; Meningococcal vaccine; Conjugate vaccine; Meningococcal meningitis; Neisseria meningitidis; Immunology; Immunization; Mathematics; Antibody; Biology","score_opus":0.01923778491224907,"score_gpt":0.30505462108086395,"score_spread":0.28581683616861486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404095814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98980147,0.0047555896,0.000009322946,0.00017701556,0.0012085726,0.0034222726,0.00034842594,0.00018858838,0.000088772314],"genre_scores_gemma":[0.9975814,0.0013662115,0.0000021756482,0.000033506854,0.00020517995,0.0005780646,0.00016884253,0.000039039816,0.000025549603],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9963948,0.0012537149,0.0010678186,0.0006375925,0.000063975036,0.0005820599],"domain_scores_gemma":[0.99806976,0.00094315846,0.00028421887,0.0005276304,0.00009710839,0.000078130615],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093381415,0.00046955925,0.0015114015,0.0003667282,0.00023842533,0.000079779216,0.00029262167,0.0001894366,0.00040628915],"category_scores_gemma":[0.00026578156,0.00033380772,0.00024191369,0.00050057855,0.00009858163,0.00034864925,0.00020759155,0.00060220546,0.000024285837],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.7521979,0.0077032777,0.1863562,0.00026620628,0.0025983015,0.000062880295,0.004476641,0.000123147,0.037977245,0.00046488238,0.00009747227,0.007675807],"study_design_scores_gemma":[0.5692872,0.00469158,0.42027223,0.00033776433,0.00080024585,0.00006928696,0.0012455373,0.00027644637,0.0018200821,0.00011017292,0.00060271524,0.00048678013],"about_ca_topic_score_codex":0.0020837276,"about_ca_topic_score_gemma":0.0024478436,"teacher_disagreement_score":0.23391601,"about_ca_system_score_codex":0.00015818383,"about_ca_system_score_gemma":0.00012709263,"threshold_uncertainty_score":0.99991137},"labels":[],"label_agreement":null},{"id":"W4404106635","doi":"10.1001/jamanetworkopen.2024.43551","title":"Quadrivalent Conjugate Vaccine and Invasive Meningococcal Disease in US Adolescents and Young Adults","year":2024,"lang":"en","type":"article","venue":"JAMA Network Open","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; Dalhousie University; University of Regina","funders":"","keywords":"Vaccination; Medicine; Incidence (geometry); Population; Demography; Meningococcal vaccine; Immunization; Poisson regression; Young adult; Pediatrics; Immunology; Gerontology; Environmental health","score_opus":0.010254378103380311,"score_gpt":0.25164169657321533,"score_spread":0.24138731846983502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404106635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98916674,0.008178178,0.0000055968903,0.000688124,0.0011810733,0.0005521097,0.000026531054,0.00003794998,0.00016369333],"genre_scores_gemma":[0.9973625,0.001709253,0.000014969029,0.00013125497,0.00018682379,0.00006093693,0.00006789958,0.00001602097,0.00045033445],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989886,0.00015834962,0.00023017245,0.00034676393,0.000009899344,0.00026620153],"domain_scores_gemma":[0.9996721,0.00006934699,0.00004020007,0.00014152084,0.000023962639,0.00005284003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002400551,0.00015255662,0.00023047079,0.000056932906,0.00012476355,0.00022367819,0.00012964832,0.00012562874,0.0001759753],"category_scores_gemma":[0.000038466056,0.00012753377,0.000025682932,0.00013713588,0.00003428775,0.0002715155,0.00040363375,0.00023443709,0.00005723609],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015335641,0.000072953546,0.9791579,0.00013535391,0.00010330416,0.000033517255,0.00037270106,0.000016742466,0.0038573395,0.00066176435,0.006393933,0.0076608914],"study_design_scores_gemma":[0.0024939114,0.00010878752,0.9762488,0.0014539659,0.000045015855,0.000048899838,0.00004365845,0.00013046368,0.00015871553,0.00022396457,0.018857447,0.00018636165],"about_ca_topic_score_codex":0.0011330635,"about_ca_topic_score_gemma":0.001335376,"teacher_disagreement_score":0.012463515,"about_ca_system_score_codex":0.000020762549,"about_ca_system_score_gemma":0.0000373522,"threshold_uncertainty_score":0.52006763},"labels":[],"label_agreement":null},{"id":"W4404128950","doi":"10.1007/s40121-024-01063-5","title":"Global Epidemiology of Meningococcal Disease-Causing Serogroups Before and After the COVID-19 Pandemic: A Narrative Review","year":2024,"lang":"en","type":"review","venue":"Infectious Diseases and Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"","keywords":"Neisseria meningitidis; Herd immunity; Carriage; Outbreak; Pandemic; Medicine; Epidemiology; Vaccination; Meningococcal vaccine; Meningitis; Meningococcal disease; Conjugate vaccine; Disease; Immunology; Virology; Pediatrics; Immunization; Coronavirus disease 2019 (COVID-19); Immune system; Infectious disease (medical specialty); Biology; Internal medicine","score_opus":0.05900659241664314,"score_gpt":0.3855755685193248,"score_spread":0.32656897610268165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404128950","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008400083,0.9882987,0.00001834673,0.00028502784,0.0007504498,0.001252124,0.0008613458,0.000120300494,0.0000136189265],"genre_scores_gemma":[0.008203949,0.9898425,0.0000012769123,0.00090760464,0.00017121628,0.0005781358,0.00020474145,0.00003225878,0.00005834639],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99721956,0.001135207,0.00071908574,0.0005706319,0.000020609672,0.00033492976],"domain_scores_gemma":[0.99850756,0.0005454322,0.000389733,0.00034981998,0.000058487563,0.00014899156],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042470518,0.0005397921,0.0017741272,0.00009094689,0.00031644807,0.000026776861,0.0001081798,0.00034583666,0.00023550383],"category_scores_gemma":[0.0002664065,0.00028994938,0.00057640416,0.0003106935,0.00053578935,0.000070629794,0.00015462148,0.0003287404,0.000012018181],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031371583,0.00023480979,0.13574103,0.03366092,0.0035644555,0.000017582188,0.0003403342,3.680794e-7,0.0000015186802,0.0015387258,0.002733009,0.8218535],"study_design_scores_gemma":[0.00048743052,0.00027004658,0.0036403763,0.006652914,0.0029064566,0.001211218,0.000022120092,4.0673146e-7,1.2562813e-8,0.0026715102,0.9818267,0.00031079954],"about_ca_topic_score_codex":0.00020296287,"about_ca_topic_score_gemma":0.00012171471,"teacher_disagreement_score":0.9790937,"about_ca_system_score_codex":0.00008974541,"about_ca_system_score_gemma":0.00027725886,"threshold_uncertainty_score":0.99995524},"labels":[],"label_agreement":null},{"id":"W4404194451","doi":"10.1111/nan.13017","title":"Nanopore sequencing identifies <i>Borrelia miyamotoi</i> as an unexpected cause of meningitis after B cell depletion","year":2024,"lang":"en","type":"article","venue":"Neuropathology and Applied Neurobiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningitis; Medicine; Meningoencephalitis; Borrelia; Encephalitis; Pleocytosis; Serology; Lymphocytic pleocytosis; Immunology; Viral meningitis; Virology; Biology; Pediatrics; Borrelia burgdorferi; Bacterial meningitis; Virus","score_opus":0.009622745244795639,"score_gpt":0.22797454700071104,"score_spread":0.2183518017559154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404194451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950091,0.0010612094,0.000043954402,0.00008504101,0.0024085059,0.00026051185,0.000061003637,0.00025787536,0.0008127869],"genre_scores_gemma":[0.99860156,0.00032106365,0.000032201362,0.0002334305,0.00008262897,0.00008372502,0.00015759475,0.000044093857,0.00044368173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980079,0.00038879548,0.00045124462,0.0007418544,0.000014765545,0.0003954493],"domain_scores_gemma":[0.9992867,0.00018280231,0.00011645942,0.00032147855,0.00005528227,0.00003724125],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017132451,0.0003034199,0.00043264616,0.00025776238,0.00017915008,0.000032880645,0.00014590003,0.00044731423,0.00034415687],"category_scores_gemma":[0.000028986162,0.0002706756,0.00007824774,0.00022957879,0.0004359505,0.000119643315,0.00013696494,0.0004661185,0.00018955434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002611432,0.000065524415,0.0011165313,0.00006463504,0.000032863838,0.00009138683,0.0003763674,0.000004285725,0.99510276,0.0021557878,0.00021679765,0.0005119129],"study_design_scores_gemma":[0.00091881544,0.0011567068,0.018736161,0.000036153342,0.00019251673,0.003444356,0.0001715067,0.0000067636947,0.9664174,0.0007781596,0.007733203,0.00040826763],"about_ca_topic_score_codex":0.000051211722,"about_ca_topic_score_gemma":0.000027877526,"teacher_disagreement_score":0.028685374,"about_ca_system_score_codex":0.000012584337,"about_ca_system_score_gemma":0.000051749797,"threshold_uncertainty_score":0.99997455},"labels":[],"label_agreement":null},{"id":"W4404234862","doi":"10.1186/s12887-024-05208-w","title":"Brain abscess caused by Streptococcus pyogenes with atypical symptoms: a case report and literature review","year":2024,"lang":"en","type":"review","venue":"BMC Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Streptococcus pyogenes; Brain abscess; Abscess; STREPTOCOCCAL INFECTIONS; Dermatology; Intensive care medicine; Surgery; Staphylococcus aureus; Immunology; Bacteria","score_opus":0.02097318378501245,"score_gpt":0.3122872853837935,"score_spread":0.29131410159878107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404234862","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00075412163,0.99582654,0.00001388446,0.000053014457,0.0010624153,0.001251036,0.0008500668,0.00015311284,0.00003583199],"genre_scores_gemma":[0.000009226324,0.99317956,0.000016450213,0.000052231928,0.00049823284,0.00032714193,0.002002155,0.00007728562,0.003837733],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977156,0.00030363895,0.0008149391,0.00078076025,0.000030971612,0.00035409746],"domain_scores_gemma":[0.9985159,0.0003007642,0.00042969928,0.000561673,0.0001272019,0.00006473469],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033052661,0.0006252728,0.0016082892,0.00022325732,0.00015962168,0.00012685357,0.00015396222,0.00092419004,0.00012394784],"category_scores_gemma":[0.0001867464,0.00038795237,0.00032166785,0.00080562424,0.00006657487,0.000083436826,0.0001519796,0.0007891802,0.000121440986],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041596693,0.00021755743,0.00036930435,0.3052101,0.0009803595,0.025170533,0.00007250243,3.7591064e-8,0.000017135448,0.000119500066,0.46363124,0.20417011],"study_design_scores_gemma":[0.0002212065,0.00009765557,0.0000052551136,0.014136505,0.0039735064,0.11389702,0.0000041029143,3.6030595e-8,7.128768e-7,0.0000030789033,0.8672413,0.0004195815],"about_ca_topic_score_codex":0.000019899964,"about_ca_topic_score_gemma":0.000069589485,"teacher_disagreement_score":0.40361008,"about_ca_system_score_codex":0.00004944282,"about_ca_system_score_gemma":0.0003685488,"threshold_uncertainty_score":0.99985725},"labels":[],"label_agreement":null},{"id":"W4404348009","doi":"10.1016/j.fander.2024.09.590","title":"Évaluation de l’intérêt du test de guérison après traitement d’une infection pharyngée à Neisseria gonorrhoeae","year":2024,"lang":"fr","type":"article","venue":"Annales de Dermatologie et de Vénéréologie - FMC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Neisseria gonorrhoeae; Gynecology; Medicine; Biology; Microbiology","score_opus":0.06516630276420453,"score_gpt":0.3262513584008288,"score_spread":0.26108505563662426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404348009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9287878,0.023629015,0.0082057305,0.029869175,0.0058965315,0.00065347523,0.00018830341,0.0010287452,0.0017411953],"genre_scores_gemma":[0.96223885,0.03100555,0.0013717054,0.0020068449,0.0006267335,0.00032783102,0.00048531746,0.000097813565,0.0018393476],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99426174,0.0019050885,0.0010191974,0.00089022995,0.00004085225,0.0018828798],"domain_scores_gemma":[0.9968702,0.0018729406,0.0003025326,0.00055638724,0.0002205536,0.00017737132],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0021741213,0.0007588471,0.00081757235,0.00050357176,0.0005784724,0.00040528298,0.00046346046,0.0017738726,0.0015316784],"category_scores_gemma":[0.0017373346,0.00077166996,0.00050622586,0.0008316874,0.00044577525,0.0007222062,0.0002541833,0.0013718228,0.0011338383],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003583598,0.0016591153,0.34331164,0.0012393263,0.0013101029,0.00027353974,0.0034934988,0.001571051,0.3854998,0.0076239565,0.17413579,0.07952383],"study_design_scores_gemma":[0.0016876962,0.0011110491,0.3606264,0.00067671645,0.0008925317,0.012385576,0.0007338881,0.0056628166,0.06410828,0.007240426,0.5437226,0.0011520118],"about_ca_topic_score_codex":0.00326026,"about_ca_topic_score_gemma":0.0012917124,"teacher_disagreement_score":0.36958683,"about_ca_system_score_codex":0.001061833,"about_ca_system_score_gemma":0.0016829527,"threshold_uncertainty_score":0.9996439},"labels":[],"label_agreement":null},{"id":"W4404374684","doi":"10.1186/s10020-024-00959-9","title":"Probiotic bacteria-released extracellular vesicles enhance macrophage phagocytosis in polymicrobial sepsis by activating the FPR1/2 pathway","year":2024,"lang":"en","type":"article","venue":"Molecular Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Phagocytosis; Microbiology; Sepsis; Biology; Probiotic; Bacteria; Macrophage; Immunology; In vitro; Biochemistry","score_opus":0.007216091681331057,"score_gpt":0.2403965699381955,"score_spread":0.23318047825686444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404374684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96933687,0.024513058,0.00087855686,0.0030308715,0.0014905081,0.00039944708,0.0000370536,0.00012953089,0.0001840966],"genre_scores_gemma":[0.997675,0.0001323189,0.000034033437,0.0002805385,0.00014391875,0.000052114032,0.00016605717,0.00004509058,0.0014709536],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983262,0.00030929816,0.00044331324,0.0004525661,0.000035964356,0.00043265213],"domain_scores_gemma":[0.9993476,0.00015578099,0.00008753084,0.00034130533,0.00003579131,0.00003196996],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036868814,0.00028569187,0.00034888453,0.00015103482,0.00017649007,0.000048418646,0.0002306134,0.00022748463,0.0014691452],"category_scores_gemma":[0.00011344635,0.00019063885,0.00009792993,0.00047828688,0.00020097048,0.000102154714,0.00006998924,0.00046872723,0.00015652415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054238742,0.000082390725,0.00003872826,0.0000637841,0.00011695961,0.000036453766,0.0004400303,0.0000014499112,0.9803829,0.00015176983,0.0019108662,0.01672043],"study_design_scores_gemma":[0.0007726238,0.00016080562,0.000640936,0.00033621505,0.000049820545,0.00006829518,0.0001270889,0.000015289652,0.9321726,0.00003252057,0.06542961,0.0001941683],"about_ca_topic_score_codex":0.0006066998,"about_ca_topic_score_gemma":0.00002554575,"teacher_disagreement_score":0.06351875,"about_ca_system_score_codex":0.000072744806,"about_ca_system_score_gemma":0.00006263968,"threshold_uncertainty_score":0.99944365},"labels":[],"label_agreement":null},{"id":"W4404463717","doi":"10.1128/mbio.03045-23","title":"Hidden allies: how extracellular vesicles drive biofilm formation, stress adaptation, and host–immune interactions in human fungal pathogens","year":2024,"lang":"en","type":"review","venue":"mBio","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Nationale de la Recherche; Canadian Institute for Advanced Research","keywords":"Immune system; Biofilm; Extracellular vesicles; Extracellular vesicle; Biology; Antifungal; Microbiology; Host (biology); Adaptation (eye); Pathogen; Intracellular; Human health; Extracellular; Cell biology; Microvesicles; Immunology; Bacteria; Ecology; Gene; Medicine; Biochemistry; microRNA","score_opus":0.045353451402390214,"score_gpt":0.2948523299717413,"score_spread":0.2494988785693511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404463717","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011189476,0.9860948,0.000039368668,0.000116325355,0.0013452229,0.0005443693,0.0005051055,0.00009386897,0.00007148511],"genre_scores_gemma":[0.016575715,0.9778315,0.000039790106,0.0000046619793,0.00014031003,0.00018344133,0.0017888639,0.00004722386,0.0033885082],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99846846,0.00025179287,0.0006096889,0.00037904183,0.000018060708,0.00027293948],"domain_scores_gemma":[0.9992423,0.00009534245,0.00027843422,0.00028664139,0.0000745372,0.000022751463],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015694828,0.00037972606,0.00082308135,0.00043921056,0.00025400874,0.00015707422,0.0001596777,0.00037128697,0.0002587069],"category_scores_gemma":[0.00003188307,0.00031370853,0.0002263647,0.0002776433,0.000088993,0.0002716472,0.00011998478,0.0005763511,0.000240365],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035406967,0.0006466067,0.00027180626,0.015930265,0.0021123888,0.000059608774,0.005448144,8.1501884e-7,0.11487134,0.006390428,0.010309685,0.8439235],"study_design_scores_gemma":[0.00027111763,0.00007385061,0.00020462209,0.004103443,0.0006631846,0.00022134812,0.00074476714,0.0000025611669,0.00086956716,0.000047282185,0.9924214,0.00037687086],"about_ca_topic_score_codex":0.00018581116,"about_ca_topic_score_gemma":0.0006854462,"teacher_disagreement_score":0.9821117,"about_ca_system_score_codex":0.00008776507,"about_ca_system_score_gemma":0.000062952706,"threshold_uncertainty_score":0.9999315},"labels":[],"label_agreement":null},{"id":"W4404747153","doi":"10.1101/2024.11.22.624948","title":"<i>Pseudomonas aeruginosa-</i> mediated cardiac dysfunction is driven by extracellular vesicles released during infection","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Pseudomonas aeruginosa; Extracellular vesicles; Extracellular; Vesicle; Microbiology; Cardiac dysfunction; Extracellular vesicle; Chemistry; Cell biology; Biology; Medicine; Bacteria; Cardiology; Microvesicles; Biochemistry; Heart failure; Genetics","score_opus":0.0074690838754952055,"score_gpt":0.19667316796785314,"score_spread":0.18920408409235795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404747153","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9722155,0.014227817,0.00008460879,0.00028120397,0.010114951,0.0007604759,0.0010827162,0.0012221448,0.000010637039],"genre_scores_gemma":[0.99663144,0.0019950739,0.00005820074,0.000052499356,0.00061221764,0.00031549868,0.000021211818,0.0001847268,0.00012911983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968542,0.00033928922,0.0007474541,0.0012926733,0.000081761274,0.0006846403],"domain_scores_gemma":[0.99801016,0.00008228896,0.0004195623,0.001024065,0.0003488846,0.000115041374],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003618083,0.0007759197,0.0008107131,0.00042168386,0.0004293814,0.00024196749,0.00027076315,0.0015487744,0.00042598794],"category_scores_gemma":[0.00010510229,0.0008184643,0.00040776178,0.00056978344,0.00014108412,0.00018073365,0.0005142642,0.0016231948,0.00150242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000727984,0.0001641007,0.008277732,0.00040766166,0.00079372886,0.000009335182,0.000014981999,0.000008633901,0.98146045,0.00007782503,0.00870806,0.000004712899],"study_design_scores_gemma":[0.00078349473,0.0000720908,0.037654094,0.0003517545,0.0004583641,1.3319288e-7,0.0000020736384,0.000018889543,0.9007785,0.0000035285696,0.059046738,0.0008303458],"about_ca_topic_score_codex":0.00061438425,"about_ca_topic_score_gemma":0.0000059668223,"teacher_disagreement_score":0.080681935,"about_ca_system_score_codex":0.0003498914,"about_ca_system_score_gemma":0.0002860111,"threshold_uncertainty_score":0.9997474},"labels":[],"label_agreement":null},{"id":"W4404937339","doi":"10.1503/cmaj.231807-f","title":"Vaccination contre le méningocoque B","year":2024,"lang":"fr","type":"article","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Health Authority","funders":"","keywords":"Vaccination; Medicine; Humanities; Philosophy; Virology","score_opus":0.0056061961018233275,"score_gpt":0.23154572484566538,"score_spread":0.22593952874384204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404937339","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0842091,0.08959535,0.00069101393,0.7089015,0.08646387,0.0002695702,0.00024369768,0.0001208061,0.029505087],"genre_scores_gemma":[0.82404685,0.0048859296,0.000030648454,0.0048204586,0.010298354,0.000013871126,0.0001000831,0.000049200604,0.1557546],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980989,0.0005197601,0.00048126382,0.0001913206,0.000100172336,0.00060855807],"domain_scores_gemma":[0.9986019,0.00030186967,0.00012663462,0.00007707682,0.00038720437,0.0005053037],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0016870843,0.00016074609,0.00024338481,0.00030282798,0.00058687205,0.00033194688,0.00015860485,0.0013994842,0.066026695],"category_scores_gemma":[0.0010467116,0.00016102527,0.00017534434,0.00030816355,0.000034630528,0.00033820944,0.00001638659,0.0017740831,0.0033112804],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005773966,0.000039156508,0.002472008,0.000034932247,0.0005109739,0.0001734624,0.00029711152,0.0000019654865,0.0004916454,0.021452928,0.74478894,0.2297311],"study_design_scores_gemma":[0.0007029609,0.00006525091,0.006893512,0.00027410986,0.00006636773,0.0024933561,0.00021059447,0.00012343437,0.00011874903,0.00064242305,0.9882442,0.00016503865],"about_ca_topic_score_codex":0.030460205,"about_ca_topic_score_gemma":0.10055374,"teacher_disagreement_score":0.73983777,"about_ca_system_score_codex":0.0013070521,"about_ca_system_score_gemma":0.0062046167,"threshold_uncertainty_score":0.9998969},"labels":[],"label_agreement":null},{"id":"W4405044387","doi":"10.1016/s1473-3099(24)00667-4","title":"Breadth of immune response, immunogenicity, reactogenicity, and safety for a pentavalent meningococcal ABCWY vaccine in healthy adolescents and young adults: results from a phase 3, randomised, controlled observer-blinded trial","year":2024,"lang":"en","type":"article","venue":"The Lancet Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Dalhousie University","funders":"GlaxoSmithKline Biologicals","keywords":"Reactogenicity; Meningococcal vaccine; Medicine; Immunogenicity; Vaccination; Meningococcal disease; Randomized controlled trial; Pediatrics; Neisseria meningitidis; Immune system; Internal medicine; Immunology; Immunization; Biology","score_opus":0.023855613102374648,"score_gpt":0.30713136465604324,"score_spread":0.2832757515536686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405044387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9794049,0.011781142,0.000038931703,0.0005458828,0.0013796048,0.0038881772,0.0028091874,0.00013620441,0.000015960306],"genre_scores_gemma":[0.99586844,0.0029240672,0.0000049060104,0.0000642091,0.00027958112,0.00042648066,0.0003736283,0.00002861345,0.00003005399],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99712527,0.00088397623,0.001078571,0.00047494288,0.000041847237,0.00039539218],"domain_scores_gemma":[0.9972997,0.0018296314,0.00032271649,0.0003978642,0.00009939159,0.000050734598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012368577,0.00030765324,0.0011668268,0.00018058969,0.00025318045,0.00007621481,0.00017067624,0.0001908668,0.000048162394],"category_scores_gemma":[0.00097591936,0.00021310104,0.00029210863,0.00021443123,0.00011290482,0.00014335163,0.00014546614,0.00029412823,0.0000044762096],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.93105304,0.0009929024,0.0044071046,0.0001336566,0.0006958758,0.0000026525695,0.00057122845,0.0000022046024,0.058972124,0.000049907758,0.00020917547,0.0029101123],"study_design_scores_gemma":[0.9111892,0.0026673167,0.081305385,0.00056493137,0.0005969822,0.000054754328,0.00013130176,0.00010321283,0.0016534239,0.00027085422,0.0012034405,0.00025921516],"about_ca_topic_score_codex":0.0029581175,"about_ca_topic_score_gemma":0.00066598575,"teacher_disagreement_score":0.07689828,"about_ca_system_score_codex":0.00007574276,"about_ca_system_score_gemma":0.00012898313,"threshold_uncertainty_score":0.86900085},"labels":[],"label_agreement":null},{"id":"W4405419501","doi":"10.1007/s12602-024-10423-z","title":"Ligilactobacillus-Derived Extracellular Vesicles Inhibit Growth and Virulence of Enteric Pathogens","year":2024,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Peptidoglycan; Microbiology; Virulence; Campylobacter jejuni; Lactobacillus salivarius; Biology; Salmonella enterica; Escherichia coli; Bacterial outer membrane; Bacteria; Salmonella; Secretion; Chemistry; Biochemistry; Gene; Probiotic","score_opus":0.010219518260660053,"score_gpt":0.21002632892199086,"score_spread":0.1998068106613308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405419501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929063,0.0048670457,0.00063873874,0.00045427584,0.00043973656,0.0004256272,0.0001333165,0.00008274353,0.00005226209],"genre_scores_gemma":[0.99767673,0.0015760082,0.00039922097,0.000027070899,0.000055722994,0.0000068865897,0.00003169445,0.000021880116,0.0002047616],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999033,0.000058884256,0.00031112513,0.00034118918,0.000013267093,0.0002425897],"domain_scores_gemma":[0.99968797,0.000032755383,0.0000759081,0.00012423281,0.00005147735,0.000027652735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012501367,0.00020050092,0.00027235656,0.00012060499,0.00015529142,0.000084108084,0.00007452924,0.00018742526,0.00005360383],"category_scores_gemma":[0.000026006004,0.00015226967,0.0000673082,0.0001432735,0.00024421845,0.00013544108,0.00013415929,0.00019105746,0.000021496046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043711003,0.0000917585,0.00040070942,0.0004786182,0.000076293705,0.000004129538,0.00023769193,3.6479736e-7,0.9929566,0.001499221,0.00011319513,0.0040977416],"study_design_scores_gemma":[0.00038786145,0.00025786756,0.00097722,0.0003535606,0.00005704095,0.00015441621,0.00002896161,0.000018778434,0.99394566,0.00015969863,0.0034461133,0.00021285251],"about_ca_topic_score_codex":0.00007092844,"about_ca_topic_score_gemma":0.000010949733,"teacher_disagreement_score":0.0047705,"about_ca_system_score_codex":0.000007473484,"about_ca_system_score_gemma":0.0000351231,"threshold_uncertainty_score":0.6209377},"labels":[],"label_agreement":null},{"id":"W4405535653","doi":"10.1016/s2214-109x(24)00409-1","title":"Safety and immunogenicity of an acellular pertussis vaccine containing genetically detoxified pertussis toxin administered to pregnant women living with and without HIV and their newborns (WoMANPOWER): a randomised controlled trial in Uganda","year":2024,"lang":"en","type":"article","venue":"The Lancet Global Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; BC Children's Hospital","funders":"Medical Research Council; Foreign, Commonwealth and Development Office; Department for International Development; Department of Health and Social Care; BC Children’s Hospital Foundation; European and Developing Countries Clinical Trials Partnership; Wellcome Trust; BC Children's Hospital; Department for International Development, UK Government; Children's Hospital Foundation; Johns Hopkins University","keywords":"Immunogenicity; Medicine; Randomized controlled trial; Whooping cough; Pertussis toxin; Human immunodeficiency virus (HIV); Pertussis vaccine; Virology; Immunology; Pediatrics; Internal medicine; Vaccination; Immunization; Antibody; Receptor","score_opus":0.014245966037328396,"score_gpt":0.28348362913364356,"score_spread":0.26923766309631514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405535653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985449,0.009726271,0.00023981769,0.0021554672,0.0001906395,0.002012724,0.000108404296,0.00005039833,0.000067284505],"genre_scores_gemma":[0.99786836,0.0014170647,0.000115753675,0.00030284942,0.0000784204,0.00013130771,0.000011446256,0.000015551572,0.00005924699],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99783677,0.0006961634,0.00056452234,0.00038875433,0.000027566444,0.00048620984],"domain_scores_gemma":[0.9990381,0.0004039917,0.00013798397,0.00027782956,0.000039471106,0.00010263251],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013197727,0.00025782365,0.0011846283,0.00006483868,0.00021880919,0.000069444366,0.0001274276,0.00012839056,0.00004281688],"category_scores_gemma":[0.00012280693,0.00013885526,0.000046926092,0.00016983415,0.00009515599,0.000077941004,0.00011542667,0.00019098248,0.0000010652001],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9058779,0.00026641382,0.009315456,0.00018539134,0.000834457,0.0000030140588,0.01153426,0.000006050506,0.03717175,0.00044968046,0.000035281384,0.034320366],"study_design_scores_gemma":[0.81094575,0.012983009,0.16357236,0.0015418237,0.00021244655,0.00043346806,0.0045698863,0.0008975245,0.0009918576,0.00018220497,0.0030545455,0.0006151279],"about_ca_topic_score_codex":0.00041908928,"about_ca_topic_score_gemma":0.001099287,"teacher_disagreement_score":0.1542569,"about_ca_system_score_codex":0.00010078849,"about_ca_system_score_gemma":0.00021879854,"threshold_uncertainty_score":0.56623536},"labels":[],"label_agreement":null},{"id":"W4405813241","doi":"10.1093/cid/ciae622","title":"Immunogenicity, Reactogenicity, and Safety of a Pentavalent Meningococcal ABCWY Vaccine in Adolescents and Young Adults Who Had Previously Received a Meningococcal ACWY Vaccine: A Phase 3, Randomized Controlled Clinical Study","year":2024,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Moderna; Novavax; Shionogi; Sanofi; GlaxoSmithKline; Seqirus; AstraZeneca; Pfizer","keywords":"Reactogenicity; Medicine; Meningococcal vaccine; Immunogenicity; Vaccination; Meningococcal disease; Neisseria meningitidis; Confidence interval; Titer; Randomized controlled trial; Pediatrics; Immunology; Internal medicine; Antigen; Immunization; Antibody","score_opus":0.01747451810620964,"score_gpt":0.348864920540674,"score_spread":0.3313904024344643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405813241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9782564,0.012568557,0.000050794515,0.00011813085,0.002442912,0.0061418083,0.00012064461,0.00025007376,0.000050652972],"genre_scores_gemma":[0.98969984,0.009191331,0.0000040571144,0.0000675471,0.00026902455,0.0005339742,0.00008014233,0.00006025585,0.00009380646],"study_design_codex":"observational","study_design_gemma":"randomized_trial","domain_scores_codex":[0.98978335,0.0040472783,0.0041951835,0.0012600911,0.00008965641,0.00062444684],"domain_scores_gemma":[0.9949599,0.0032100016,0.0007637929,0.0005579162,0.00026857073,0.00023983269],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.004223747,0.0006591204,0.004331286,0.00039787393,0.0002454558,0.00013653522,0.0002608188,0.00058474776,0.00024197914],"category_scores_gemma":[0.004137537,0.00049978646,0.0010860327,0.0004418156,0.00038407964,0.0002828132,0.0005220912,0.0010849007,0.000025767607],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.23466694,0.009364563,0.7410493,0.00023581975,0.0030098394,0.000027880486,0.00048748066,0.0000012809727,0.002021778,0.000052075087,0.00027597148,0.0088070985],"study_design_scores_gemma":[0.53485405,0.0038583514,0.4560001,0.0012370948,0.002490829,0.00008999072,0.00020928693,0.00028936323,0.00006979997,0.00011132808,0.0003158894,0.0004738867],"about_ca_topic_score_codex":0.0007924723,"about_ca_topic_score_gemma":0.00088280666,"teacher_disagreement_score":0.30018714,"about_ca_system_score_codex":0.00007381916,"about_ca_system_score_gemma":0.00021448327,"threshold_uncertainty_score":0.99974537},"labels":[],"label_agreement":null},{"id":"W4406229989","doi":"10.1016/j.pediatrneurol.2025.01.002","title":"Early Corticosteroid Use and Short-Term Outcomes in Pediatric Bacterial Meningitis: A Nationwide Study in Japan, 2014 to 2022","year":2025,"lang":"en","type":"article","venue":"Pediatric Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Health, Labour and Welfare; Swine Innovation Porc","keywords":"Medicine; Pediatrics; Term (time); Corticosteroid; Meningitis; Bacterial meningitis; Internal medicine; Physics","score_opus":0.015528007522053758,"score_gpt":0.2648027682782365,"score_spread":0.24927476075618277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406229989","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954367,0.00023633399,0.0000053859776,0.0004463077,0.002971489,0.00080030557,0.000026590462,0.000052333904,0.000024517922],"genre_scores_gemma":[0.9988707,0.0002687547,0.0000057575476,0.00019113321,0.00014681916,0.00018046614,0.000018367406,0.000016270935,0.0003017893],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979679,0.00042238878,0.00061232166,0.00054857414,0.000023654075,0.00042515396],"domain_scores_gemma":[0.9990655,0.00050312874,0.000083280895,0.00025880206,0.00005563616,0.00003363269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025864292,0.0002333706,0.0004824376,0.0012512433,0.000094582436,0.000057631845,0.00017041698,0.0002445746,0.00016057523],"category_scores_gemma":[0.00029830894,0.00022945953,0.000045162407,0.0006313519,0.00002570839,0.00019647852,0.00026440553,0.00040686628,0.00006329959],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035489624,0.0004282705,0.99056154,0.000011460518,0.000023492546,0.0000152446355,0.00025229735,0.0000029893756,0.0075036297,0.00002304024,0.00050834107,0.00031478528],"study_design_scores_gemma":[0.0022183873,0.0008525196,0.99612564,0.0000010879119,0.000080147816,0.00001972045,0.000016537171,8.198477e-7,0.000049685153,0.00002139708,0.00044790062,0.00016615167],"about_ca_topic_score_codex":0.0007247773,"about_ca_topic_score_gemma":0.0026007846,"teacher_disagreement_score":0.0074539445,"about_ca_system_score_codex":0.000020098621,"about_ca_system_score_gemma":0.00005596405,"threshold_uncertainty_score":0.9357088},"labels":[],"label_agreement":null},{"id":"W4406412401","doi":"10.1016/s1959-5182(18)82362-5","title":"10.1016/s1959-5182(18)82362-5","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.007662135512408519,"score_gpt":0.18850622633041236,"score_spread":0.18084409081800384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406412401","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017930442,0.0001749602,4.589749e-7,0.00019593883,0.000016803078,0.00013331954,0.000035316967,0.00015651723,0.98135626],"genre_scores_gemma":[0.0018443827,9.072923e-7,0.000013157917,0.000029408735,0.00010739752,0.000019918461,0.00007734078,0.00001574196,0.9978917],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999329,0.000059256643,0.00015968211,0.00019125546,0.000008398834,0.00025241892],"domain_scores_gemma":[0.999644,0.000034295284,0.00002232987,0.00023592984,0.000034861903,0.000028617866],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000757981,0.00012626499,0.00017174237,0.000065227636,0.00014490355,0.000020692722,0.00012853026,0.00014668792,0.99957174],"category_scores_gemma":[0.000017291193,0.00011344179,0.00006230829,0.00012980889,0.00003118955,0.00006756113,0.000033419852,0.000118650125,0.9981351],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000134619,0.00007527948,4.8385294e-7,0.0000021311246,0.000046226538,5.53013e-7,0.000008938978,0.0000033974052,0.032584284,0.0000020952757,0.6177054,0.34943658],"study_design_scores_gemma":[0.0004013015,0.000201025,0.00017076523,0.000008257223,0.000019951982,0.000045762805,7.9795706e-7,8.6124135e-7,0.003555483,0.000005305193,0.99544275,0.00014776316],"about_ca_topic_score_codex":0.00007833254,"about_ca_topic_score_gemma":6.4226333e-7,"teacher_disagreement_score":0.3777373,"about_ca_system_score_codex":0.000016326061,"about_ca_system_score_gemma":0.000016360744,"threshold_uncertainty_score":0.4626022},"labels":[],"label_agreement":null},{"id":"W4406433902","doi":"10.1016/j.vaccine.2025.126709","title":"Adjuvant-dependent impacts on vaccine-induced humoral responses and protection in preclinical models of nasal and genital colonization by pathogenic Neisseria","year":2025,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada); Muscular Dystrophy Canada; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Canada Research Chairs","keywords":"Adjuvant; Immunology; Neisseria meningitidis; Neisseria; Colonization; Biology; Microbiology; Humoral immunity; Meningococcal vaccine; Neisseria gonorrhoeae; Medicine; Virology; Immune system; Immunization; Bacteria","score_opus":0.028021880224199512,"score_gpt":0.299442366600204,"score_spread":0.2714204863760045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406433902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973652,0.0012136867,0.000074042444,0.00031269167,0.00040209602,0.0005236679,0.00004388881,0.000036426416,0.000028345623],"genre_scores_gemma":[0.99934685,0.00020538624,0.000013998433,0.000035613863,0.000021541715,0.0000272894,0.000041808926,0.000011805822,0.0002956984],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99885875,0.00022619044,0.00041575026,0.0002956949,0.0000132655005,0.00019032277],"domain_scores_gemma":[0.9995045,0.00011619319,0.00012414066,0.00016268149,0.00007015595,0.000022317718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027286887,0.00016243267,0.00033404396,0.00023525387,0.00009378287,0.000016819438,0.00005752117,0.00026762288,0.0000566661],"category_scores_gemma":[0.00019027505,0.00014168996,0.000032390362,0.00022073515,0.0000082944325,0.00014727557,0.000069760434,0.00021288994,0.0000037426998],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033581564,0.00021589582,0.022388918,0.00003262411,0.00005835698,6.749396e-7,0.00008811476,0.000010408557,0.96981096,0.00018362975,0.00019082449,0.0036614274],"study_design_scores_gemma":[0.009271757,0.0025010188,0.7059331,0.0001520002,0.00008800145,0.00007827281,0.000112954025,0.0002947385,0.28028977,0.0006393173,0.00036599633,0.0002730847],"about_ca_topic_score_codex":0.00034914495,"about_ca_topic_score_gemma":0.0004100189,"teacher_disagreement_score":0.6895212,"about_ca_system_score_codex":0.000031839263,"about_ca_system_score_gemma":0.00005431235,"threshold_uncertainty_score":0.5777949},"labels":[],"label_agreement":null},{"id":"W4406437432","doi":"10.2196/50709","title":"Online Tailored Decision Aid for Maternal Pertussis Vaccination in a Randomized Controlled Trial: Process Evaluation Study","year":2025,"lang":"en","type":"article","venue":"JMIR Formative Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"ZonMw","keywords":"Preprint; Randomized controlled trial; Vaccination; Medicine; Process (computing); Computer science; Virology; World Wide Web; Internal medicine","score_opus":0.05192841420756293,"score_gpt":0.46215286357073626,"score_spread":0.4102244493631733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406437432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97691584,0.00024664955,0.00053691457,0.00031995738,0.0009844771,0.020617474,0.000017624545,0.000030652045,0.0003304184],"genre_scores_gemma":[0.9825407,0.000038195707,0.000022682614,0.000010099555,0.00004153198,0.016574247,0.00012873387,0.000009280731,0.00063450664],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9957961,0.0025840183,0.0008956585,0.0002633741,0.00011576265,0.00034511756],"domain_scores_gemma":[0.9958126,0.0025085842,0.00018815408,0.00018679148,0.001288851,0.000015013713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009191465,0.00015760708,0.0009665246,0.0011254101,0.000342685,0.000079273086,0.00019678137,0.00017981397,0.0004566909],"category_scores_gemma":[0.0027033002,0.0001034904,0.00019533557,0.00064386055,0.000050228064,0.00032812642,0.00007492591,0.00032840983,0.00002966856],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.97179025,0.0026739247,0.0006137903,0.000045372624,0.00032271436,1.4232887e-7,0.0023736868,0.000017807713,0.0016043566,0.00026982013,0.000531314,0.019756805],"study_design_scores_gemma":[0.9756,0.0010934932,0.013110538,0.000100801924,0.00007228583,0.0000012082774,0.002383237,0.0029265902,0.0012295491,0.003047095,0.00033810735,0.000097061915],"about_ca_topic_score_codex":0.00013922642,"about_ca_topic_score_gemma":0.00031207514,"teacher_disagreement_score":0.019659743,"about_ca_system_score_codex":0.00019774273,"about_ca_system_score_gemma":0.00024218735,"threshold_uncertainty_score":0.5000445},"labels":[],"label_agreement":null},{"id":"W4406442503","doi":"10.1016/j.yped.2013.05.078","title":"10.1016/j.yped.2013.05.078","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Viral meningitis; Meningitis; Pediatrics; Virology; Family medicine; Bacterial meningitis","score_opus":0.006360459698860617,"score_gpt":0.184376637287371,"score_spread":0.17801617758851038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406442503","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026992807,0.00019922656,3.7707375e-7,0.00038090194,0.000021245118,0.00013294192,0.000026851203,0.0001525311,0.9720931],"genre_scores_gemma":[0.0014168477,0.0000013224416,0.000011907494,0.000029911314,0.00010463819,0.000015724583,0.000060087372,0.000014268576,0.9983453],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993952,0.00005176043,0.00014304355,0.00017220934,0.0000074330933,0.00023037757],"domain_scores_gemma":[0.999672,0.000029669358,0.000021294096,0.00021812113,0.00003280253,0.000026103022],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000674373,0.0001154084,0.00015610663,0.00005947866,0.00012922935,0.00001795487,0.00011562421,0.00013547935,0.99911404],"category_scores_gemma":[0.000012533824,0.00010140138,0.000055589924,0.00011161474,0.00002791981,0.00006382122,0.000030348763,0.00010516118,0.99801487],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010236532,0.00006253735,3.4446697e-7,0.0000016788981,0.000040278555,4.7716196e-7,0.000009168477,0.0000033845185,0.021929782,0.000002028438,0.6527555,0.32509246],"study_design_scores_gemma":[0.00035447665,0.00020091797,0.00012272547,0.000007008081,0.000018384439,0.000048268532,6.984457e-7,9.68219e-7,0.0025084012,0.000004031192,0.9966008,0.00013332741],"about_ca_topic_score_codex":0.0001404585,"about_ca_topic_score_gemma":0.0000012421558,"teacher_disagreement_score":0.34384528,"about_ca_system_score_codex":0.000012707104,"about_ca_system_score_gemma":0.000013689107,"threshold_uncertainty_score":0.41350284},"labels":[],"label_agreement":null},{"id":"W4406451531","doi":"10.1016/s1166-8598(20)30173-3","title":"10.1016/s1166-8598(20)30173-3","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Microbiology; Medicine; Haemophilus; Intensive care medicine; Biology; Bacteria; Genetics","score_opus":0.005802840895053957,"score_gpt":0.18043780249589594,"score_spread":0.174634961600842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406451531","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021182483,0.0001756414,4.238106e-7,0.00027032458,0.000017354356,0.00013553539,0.000034169305,0.00015990318,0.9780242],"genre_scores_gemma":[0.0014299407,7.8057553e-7,0.00001280209,0.000028497123,0.000111869966,0.000019857756,0.00008020137,0.000015842867,0.9983002],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993256,0.00005901147,0.00015900566,0.0001929092,0.000008439553,0.00025507537],"domain_scores_gemma":[0.9996369,0.000032819968,0.000023708757,0.00024183252,0.000035788955,0.0000289508],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007624164,0.00012794412,0.0001729855,0.00006566878,0.00015062954,0.000020339456,0.0001314334,0.00014743926,0.99923664],"category_scores_gemma":[0.000015789608,0.00011382479,0.000063375875,0.00012639619,0.000031735577,0.00006694714,0.000033450848,0.00011929984,0.9980693],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015445756,0.00008464917,5.912802e-7,0.0000024042404,0.00005589741,6.596336e-7,0.000012320468,0.00000585082,0.043453384,0.0000024901756,0.5604528,0.3957745],"study_design_scores_gemma":[0.0004009252,0.00019067065,0.00013339403,0.000008200805,0.000020455109,0.000044361463,7.573816e-7,0.0000011524812,0.0034059165,0.0000051235,0.99564064,0.00014839762],"about_ca_topic_score_codex":0.00006496262,"about_ca_topic_score_gemma":0.0000010287235,"teacher_disagreement_score":0.43518785,"about_ca_system_score_codex":0.000015698684,"about_ca_system_score_gemma":0.000017195529,"threshold_uncertainty_score":0.46416402},"labels":[],"label_agreement":null},{"id":"W4406454806","doi":"10.1016/s0186-0194(08)92084-0","title":"10.1016/s0186-0194(08)92084-0","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Philosophy","score_opus":0.008285028048820961,"score_gpt":0.17720469774231748,"score_spread":0.16891966969349653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406454806","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000016340015,0.00078598957,2.5615154e-7,0.00012350238,0.000042746913,0.00030601362,0.00024783844,0.000214164,0.9982631],"genre_scores_gemma":[0.0000058191195,0.000008306261,0.000007785083,0.000028114888,0.00033909068,0.00002153353,0.00058395026,0.000082867344,0.9989225],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99881643,0.000033504726,0.00035502683,0.0004356095,0.000018921715,0.00034052008],"domain_scores_gemma":[0.99918133,0.00005641017,0.00011786184,0.00051930186,0.000077692326,0.000047389494],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008390092,0.00041414396,0.00053087977,0.00022239152,0.00017489039,0.000031943873,0.0002607801,0.00083463243,0.9994836],"category_scores_gemma":[0.000012902533,0.0003908012,0.00021345314,0.00003707548,0.00007543359,0.000054511172,0.00011181339,0.00044484247,0.99909294],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019528696,0.00003703414,1.1210573e-8,0.000009029317,0.00026954376,0.000002558601,0.0000070327337,8.505521e-7,0.0029048135,0.00014498636,0.7465622,0.2498667],"study_design_scores_gemma":[0.00038354172,0.000290829,0.0000026302837,0.00007255762,0.00012013015,0.000089069246,1.7815474e-7,1.1704106e-7,0.00032631616,0.00012464945,0.99814564,0.0004443685],"about_ca_topic_score_codex":0.000042827472,"about_ca_topic_score_gemma":0.000001274761,"teacher_disagreement_score":0.25158346,"about_ca_system_score_codex":0.00004874956,"about_ca_system_score_gemma":0.00005319573,"threshold_uncertainty_score":0.9998544},"labels":[],"label_agreement":null},{"id":"W4406466507","doi":"10.1016/j.yneu.2013.03.022","title":"10.1016/j.yneu.2013.03.022","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Bacterial meningitis; Meningitis; Intensive care medicine; Pediatrics","score_opus":0.006280523156360218,"score_gpt":0.18282952368770242,"score_spread":0.1765490005313422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406466507","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030575082,0.00018998684,2.6792418e-7,0.00036047437,0.000018583896,0.00013703508,0.000030429725,0.00015266004,0.9685355],"genre_scores_gemma":[0.0017551212,0.0000013009164,0.000010537576,0.000028534727,0.0000974611,0.000020150435,0.00006869923,0.000014708027,0.9980035],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993661,0.000060112674,0.00014743474,0.00017967516,0.000007851767,0.00023884026],"domain_scores_gemma":[0.9996622,0.000030930285,0.000022140193,0.00022535567,0.000032806387,0.000026571044],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007215829,0.000118086326,0.00015959916,0.000061269646,0.00014381645,0.00001825293,0.00012282046,0.0001307246,0.9993539],"category_scores_gemma":[0.000013098772,0.00010481576,0.00005713569,0.000119435805,0.000029321945,0.000065705135,0.000033611024,0.00011389474,0.998534],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011449012,0.00007293964,4.2395405e-7,0.0000018098602,0.00004408408,4.5744545e-7,0.000010375593,0.0000049359082,0.02772222,0.0000025001143,0.5882477,0.383778],"study_design_scores_gemma":[0.0003523456,0.00019382441,0.00013548185,0.000006028399,0.000017763394,0.000040364444,7.043567e-7,0.0000012650127,0.0027248792,0.000004544004,0.9963861,0.00013669643],"about_ca_topic_score_codex":0.00014148309,"about_ca_topic_score_gemma":0.0000011449816,"teacher_disagreement_score":0.40813836,"about_ca_system_score_codex":0.000014034224,"about_ca_system_score_gemma":0.000015395986,"threshold_uncertainty_score":0.42742625},"labels":[],"label_agreement":null},{"id":"W4406518834","doi":"10.1016/s0029-7437(11)70088-x","title":"10.1016/s0029-7437(11)70088-x","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Gonorrhea; Cephalosporin; Resistance (ecology); Microbiology; Biology; Virology; Antibiotics; Ecology","score_opus":0.0066698817763431615,"score_gpt":0.1871212181512884,"score_spread":0.18045133637494523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406518834","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031459678,0.00014756413,5.3894286e-7,0.00025308868,0.0000040499795,0.00014223029,0.000029125471,0.00019443335,0.96776927],"genre_scores_gemma":[0.001514335,7.358865e-7,0.000016407792,0.000025503488,0.00011383205,0.000020694833,0.00006475128,0.000016386026,0.99822736],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99931365,0.00006063715,0.00016350302,0.00019623015,0.000008706712,0.00025727844],"domain_scores_gemma":[0.99963087,0.0000368229,0.000023931198,0.00024342448,0.000035917194,0.000029038529],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000797544,0.00013027203,0.00017449653,0.00006625391,0.0001503975,0.000021011167,0.00013408285,0.00015036592,0.99945545],"category_scores_gemma":[0.000017994224,0.00011614172,0.00006461274,0.00013072432,0.000033059605,0.00006812789,0.000034832374,0.000105362975,0.9980576],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090038586,0.00007272988,0.0000010027175,0.0000020780706,0.000038396996,4.0797568e-7,0.000010247117,0.0000038548396,0.021884954,0.000003098281,0.8677542,0.11013899],"study_design_scores_gemma":[0.0003936887,0.0001621256,0.00020324676,0.000008353013,0.000020393714,0.00004564287,8.3400425e-7,0.0000011185435,0.0032736238,0.000004507535,0.9957352,0.00015126188],"about_ca_topic_score_codex":0.00011190139,"about_ca_topic_score_gemma":0.0000015399658,"teacher_disagreement_score":0.127981,"about_ca_system_score_codex":0.000015987594,"about_ca_system_score_gemma":0.000015675152,"threshold_uncertainty_score":0.47361216},"labels":[],"label_agreement":null},{"id":"W4406519537","doi":"10.1016/s0029-7437(12)70167-2","title":"10.1016/s0029-7437(12)70167-2","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Vaccination; Virology; Key (lock); Medicine; Pertussis vaccine; Whooping cough; Immunology; Immunization; Computer science; Immune system; Computer security","score_opus":0.007112780296406982,"score_gpt":0.1863750420418831,"score_spread":0.1792622617454761,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406519537","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015617077,0.00014706535,5.3756224e-7,0.00020815954,0.000003625273,0.00013906193,0.000028146154,0.00018813643,0.9836682],"genre_scores_gemma":[0.0012372405,9.148008e-7,0.000014457485,0.000026558528,0.000113297,0.000020675343,0.00006270896,0.000016585309,0.99850756],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993087,0.000060851195,0.00016318729,0.00019777477,0.000008719085,0.0002607846],"domain_scores_gemma":[0.9996383,0.000035395544,0.00002412542,0.0002420698,0.000030581014,0.000029536357],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000794997,0.00013183182,0.00017716632,0.000067442925,0.00014877865,0.000021239608,0.00013051266,0.0001478714,0.99948996],"category_scores_gemma":[0.000017159713,0.00011661459,0.000064932596,0.000105176376,0.00003222308,0.00007172791,0.00003438101,0.00012021579,0.9984675],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012484174,0.00006965074,4.7874653e-7,0.0000019115623,0.000045678997,3.9029626e-7,0.000009994037,0.0000030662095,0.026670115,0.0000020017183,0.82393223,0.14913961],"study_design_scores_gemma":[0.00041128264,0.00020932121,0.00017734677,0.0000087426015,0.000020828278,0.000044545483,7.4645965e-7,0.0000010123242,0.003299318,0.00000483355,0.995669,0.00015303779],"about_ca_topic_score_codex":0.0000816906,"about_ca_topic_score_gemma":0.0000011919797,"teacher_disagreement_score":0.17173673,"about_ca_system_score_codex":0.000016499644,"about_ca_system_score_gemma":0.00001619474,"threshold_uncertainty_score":0.4755405},"labels":[],"label_agreement":null},{"id":"W4406541962","doi":"10.1016/s0246-0335(19)30215-7","title":"10.1016/s0246-0335(19)30215-7","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Vaccination; Medicine; Virology","score_opus":0.007297106269078313,"score_gpt":0.1906986827782244,"score_spread":0.1834015765091461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406541962","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008469479,0.00022873271,4.9398693e-7,0.00024397807,0.000015826687,0.0001357496,0.000030162984,0.00015999994,0.99071556],"genre_scores_gemma":[0.0010451981,8.794379e-7,0.000013984138,0.000035617624,0.00010983229,0.000021190175,0.00007295568,0.000015485984,0.9986849],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99931616,0.00006416113,0.00015863503,0.00019519923,0.000008725282,0.00025711377],"domain_scores_gemma":[0.9996297,0.000039553317,0.000022664093,0.00023630945,0.0000344749,0.00003730662],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008837406,0.00012575203,0.00016809917,0.00007011427,0.00015494402,0.000021281681,0.00012911794,0.00014712833,0.9996309],"category_scores_gemma":[0.000026245647,0.00011163674,0.00006293834,0.00013802899,0.000032369724,0.0000643118,0.000034609,0.00012373792,0.998631],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011433125,0.00006246046,4.5073273e-7,0.0000020972104,0.000042920565,5.569289e-7,0.000009864703,0.0000039865754,0.019899772,0.0000015763901,0.8253043,0.15455766],"study_design_scores_gemma":[0.00040415427,0.00018166559,0.00012832152,0.000007674732,0.000019495637,0.000048488782,9.824913e-7,9.1568666e-7,0.0023773739,0.000006482975,0.9966787,0.00014572978],"about_ca_topic_score_codex":0.000110168134,"about_ca_topic_score_gemma":0.0000010440893,"teacher_disagreement_score":0.1713744,"about_ca_system_score_codex":0.000018979377,"about_ca_system_score_gemma":0.000020898571,"threshold_uncertainty_score":0.4552414},"labels":[],"label_agreement":null},{"id":"W4406542061","doi":"10.1016/j.ymed.2014.05.001","title":"10.1016/j.ymed.2014.05.001","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Meningococcal vaccine; Component (thermodynamics); Virology; Immunology; Antibody; Immunization","score_opus":0.005842597409587815,"score_gpt":0.18491661878056612,"score_spread":0.1790740213709783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406542061","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019753294,0.0001999553,1.9360006e-7,0.00024321949,0.000020786458,0.00012892045,0.00002965288,0.00015000289,0.97947395],"genre_scores_gemma":[0.0010863343,0.0000014602975,0.0000075619205,0.000029024162,0.0001036185,0.000017595255,0.0000954957,0.00001444986,0.9986445],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993823,0.000055704822,0.00014338583,0.00017360102,0.000007663422,0.00023731949],"domain_scores_gemma":[0.9996668,0.000032407694,0.000021691498,0.00021880069,0.000032592765,0.0000276767],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007277795,0.000115258685,0.00015932089,0.000059880775,0.00012399953,0.000017717155,0.00011669013,0.00013818387,0.9995855],"category_scores_gemma":[0.000012865348,0.00009976188,0.000051083054,0.00009065834,0.000029933768,0.000058914546,0.000029713441,0.00010660513,0.998711],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007963125,0.000065771914,2.3872357e-7,0.0000014010682,0.000033039247,4.181821e-7,0.000004111456,0.0000015674925,0.020854166,0.0000014009057,0.6064431,0.37251514],"study_design_scores_gemma":[0.00044057038,0.00020034512,0.00011185337,0.00000629515,0.00001774578,0.000054741773,4.244356e-7,6.772976e-7,0.0028780394,0.0000034305335,0.99615514,0.00013072423],"about_ca_topic_score_codex":0.0001067984,"about_ca_topic_score_gemma":7.773683e-7,"teacher_disagreement_score":0.38971204,"about_ca_system_score_codex":0.000013372814,"about_ca_system_score_gemma":0.000013199235,"threshold_uncertainty_score":0.40681714},"labels":[],"label_agreement":null},{"id":"W4406566079","doi":"10.1016/j.ynpm.2015.07.015","title":"10.1016/j.ynpm.2015.07.015","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Pertussis vaccine; Medicine; Whooping cough; Intensive care medicine; Pediatrics; Virology; Immunology; Immunization; Vaccination; Immune system","score_opus":0.006458666175690514,"score_gpt":0.19279312553489913,"score_spread":0.18633445935920862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406566079","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020622108,0.00022163932,3.922028e-7,0.00034727636,0.000018347037,0.00012927018,0.000028199229,0.00016229297,0.97847044],"genre_scores_gemma":[0.0019258896,7.804297e-7,0.000012418871,0.000026777907,0.00010581382,0.000016801843,0.000062644634,0.000015031113,0.99783385],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99936676,0.00005906403,0.00014966882,0.00017810507,0.000008189278,0.00023823629],"domain_scores_gemma":[0.9996551,0.000029628938,0.000022140586,0.00022647534,0.00003767017,0.000028943676],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008152929,0.00011931202,0.00016370726,0.000058570808,0.00012670134,0.00001893966,0.00012010013,0.00014048343,0.99930704],"category_scores_gemma":[0.000016811302,0.0001054104,0.00005613797,0.00010817171,0.000029359868,0.000066052155,0.00003147275,0.000110609406,0.9988242],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001287765,0.000073086514,4.7229815e-7,0.0000017922954,0.000049540922,4.8656955e-7,0.000011331104,0.0000037457132,0.025183816,0.0000022403526,0.6449311,0.32961366],"study_design_scores_gemma":[0.00038468314,0.0001917495,0.00013870337,0.0000071979603,0.000019506582,0.00004101105,8.155224e-7,9.72593e-7,0.0027410146,0.000004743351,0.9963309,0.00013867432],"about_ca_topic_score_codex":0.00008269265,"about_ca_topic_score_gemma":6.570632e-7,"teacher_disagreement_score":0.35139987,"about_ca_system_score_codex":0.000015418591,"about_ca_system_score_gemma":0.000016742018,"threshold_uncertainty_score":0.42985114},"labels":[],"label_agreement":null},{"id":"W4406568584","doi":"10.1016/s1634-6939(20)30694-3","title":"10.1016/s1634-6939(20)30694-3","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.005644474484819726,"score_gpt":0.17922604186688418,"score_spread":0.17358156738206446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406568584","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019791294,0.00016968744,4.4963832e-7,0.00028962144,0.000017475404,0.00013679558,0.0000348246,0.00016257307,0.9793973],"genre_scores_gemma":[0.0013163063,7.0212053e-7,0.000012941391,0.000029399187,0.00011370505,0.000019914243,0.00008263252,0.000016005579,0.9984084],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993207,0.000059736158,0.00016073795,0.00019308957,0.000008492157,0.00025723252],"domain_scores_gemma":[0.9996412,0.00003299431,0.00002341252,0.00023777876,0.000035558864,0.000029076931],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007742045,0.00012839439,0.00017312674,0.00006647929,0.0001464771,0.000020426738,0.00012948026,0.00014792108,0.99927557],"category_scores_gemma":[0.000015471853,0.000114155446,0.00006326668,0.0001329383,0.00003199669,0.00006855333,0.000033324613,0.00011617722,0.9980978],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001483586,0.00008241944,5.2608635e-7,0.0000022955921,0.000055241955,6.217389e-7,0.000011394185,0.000005245464,0.04507345,0.000002322215,0.57970893,0.3749092],"study_design_scores_gemma":[0.00040565705,0.00019269885,0.00012054819,0.000008054575,0.000020848693,0.00004457295,7.391393e-7,0.0000010614048,0.0036947585,0.000005201171,0.995357,0.0001488599],"about_ca_topic_score_codex":0.0000717492,"about_ca_topic_score_gemma":0.0000010129684,"teacher_disagreement_score":0.41564807,"about_ca_system_score_codex":0.00001603542,"about_ca_system_score_gemma":0.0000169421,"threshold_uncertainty_score":0.4655124},"labels":[],"label_agreement":null},{"id":"W4406568656","doi":"10.1016/s1634-6939(20)30699-2","title":"10.1016/s1634-6939(20)30699-2","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Psychology","score_opus":0.005727264613643266,"score_gpt":0.17967194458480673,"score_spread":0.17394467997116347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406568656","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019664202,0.00016797481,4.5755903e-7,0.0002739982,0.00002038374,0.00013666971,0.00003465993,0.00016268113,0.979539],"genre_scores_gemma":[0.0012455258,7.0722103e-7,0.000012925501,0.000028972196,0.000112230875,0.000019888012,0.000082568935,0.000015996271,0.9984812],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932134,0.00005982058,0.00016049684,0.00019295145,0.000008475509,0.00025688612],"domain_scores_gemma":[0.99964565,0.000028764058,0.000023392202,0.00023753493,0.000035803674,0.000028862192],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007731881,0.00012822647,0.00017282685,0.00006637795,0.00014610615,0.000020314676,0.00012937414,0.00014768158,0.99926287],"category_scores_gemma":[0.000015314208,0.000114069466,0.00006321996,0.0001327908,0.00003199105,0.0000685077,0.000033290144,0.0001159427,0.9980633],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014541663,0.00008101577,6.226216e-7,0.0000022859588,0.000054309778,6.1462293e-7,0.000011047422,0.000004008694,0.043551706,0.0000022000856,0.5870289,0.36911783],"study_design_scores_gemma":[0.00040438457,0.00019202061,0.0001353236,0.000008041651,0.000020813857,0.000045166053,7.420597e-7,0.0000010703168,0.0035881267,0.000005073123,0.9954505,0.00014876078],"about_ca_topic_score_codex":0.00007268773,"about_ca_topic_score_gemma":0.0000010462282,"teacher_disagreement_score":0.40842155,"about_ca_system_score_codex":0.000016028773,"about_ca_system_score_gemma":0.000016915968,"threshold_uncertainty_score":0.46516177},"labels":[],"label_agreement":null},{"id":"W4406582655","doi":"10.1016/s1166-8598(20)30092-2","title":"10.1016/s1166-8598(20)30092-2","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Geography","score_opus":0.005704910766248389,"score_gpt":0.17978528989965611,"score_spread":0.17408037913340774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406582655","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019405186,0.00018408724,4.4422848e-7,0.0002760166,0.00001666031,0.00013620299,0.000034738852,0.00016224754,0.9797844],"genre_scores_gemma":[0.0012659389,7.589806e-7,0.00001320602,0.00003057148,0.00011238751,0.000019483461,0.00008309944,0.000015799027,0.99845874],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932444,0.000059543952,0.00015998798,0.00019244582,0.00000844671,0.00025513856],"domain_scores_gemma":[0.9996424,0.00003292326,0.000023305356,0.00023683584,0.00003579583,0.000028786426],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007596515,0.00012802257,0.0001727939,0.00006643928,0.00014453116,0.00001984825,0.00012890148,0.0001473666,0.9992666],"category_scores_gemma":[0.000015405167,0.00011383274,0.00006315725,0.00013168986,0.000031048046,0.00006633455,0.00003277882,0.000119276694,0.99809754],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001504735,0.00008362483,5.167966e-7,0.0000023082168,0.000053830518,6.2599406e-7,0.000012221237,0.0000056415156,0.0461085,0.0000024833046,0.5584076,0.39517215],"study_design_scores_gemma":[0.00039808397,0.00019454393,0.00012249875,0.000008076053,0.000020394105,0.000043548407,7.526719e-7,0.0000011535424,0.003454856,0.000005211725,0.9956024,0.00014844323],"about_ca_topic_score_codex":0.00006960018,"about_ca_topic_score_gemma":0.0000010420443,"teacher_disagreement_score":0.43719482,"about_ca_system_score_codex":0.000015924777,"about_ca_system_score_gemma":0.00001720179,"threshold_uncertainty_score":0.46419644},"labels":[],"label_agreement":null},{"id":"W4406650008","doi":"10.1016/b978-1-4557-4696-5.00140-8","title":"10.1016/b978-1-4557-4696-5.00140-8","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Temporal bone; Computer science; Surgery","score_opus":0.008775757241646068,"score_gpt":0.18100103887892427,"score_spread":0.1722252816372782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406650008","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000011629887,0.0009692901,3.274934e-7,0.00013328335,0.000053416436,0.00031892487,0.0002449775,0.0002290543,0.99803907],"genre_scores_gemma":[0.000006049006,0.0000044847434,0.000009141903,0.00003818252,0.0003704256,0.000022371909,0.00063280674,0.00008834372,0.9988282],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987401,0.000036409565,0.00037949017,0.0004565759,0.000020397083,0.0003670545],"domain_scores_gemma":[0.999155,0.00006274385,0.00012318323,0.00052189425,0.00008505152,0.00005216153],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008991871,0.0004414816,0.000563004,0.00024845934,0.00018177002,0.00003603755,0.00027098905,0.0008704395,0.9994208],"category_scores_gemma":[0.000013686037,0.00042091883,0.00021975252,0.000039907514,0.0000776988,0.00005940623,0.00011785629,0.00047425745,0.9986977],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020923247,0.000042760654,1.5716425e-8,0.000010127182,0.00029669618,0.0000035785336,0.000008350018,9.943175e-7,0.002481495,0.00016135792,0.37024146,0.62654394],"study_design_scores_gemma":[0.00040148283,0.00030165334,0.0000031723955,0.00007788246,0.00012507197,0.000088294386,1.8073915e-7,1.379275e-7,0.00028647072,0.00012566296,0.99811494,0.0004750431],"about_ca_topic_score_codex":0.00006281018,"about_ca_topic_score_gemma":0.0000013645196,"teacher_disagreement_score":0.6278735,"about_ca_system_score_codex":0.000050795737,"about_ca_system_score_gemma":0.00005636573,"threshold_uncertainty_score":0.9998243},"labels":[],"label_agreement":null},{"id":"W4406656902","doi":"10.1016/b978-0-443-10303-2.50058-8","title":"10.1016/b978-0-443-10303-2.50058-8","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Meningitis; Medicine; Pediatrics","score_opus":0.0089282896589153,"score_gpt":0.18212759475233306,"score_spread":0.17319930509341777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406656902","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001778933,0.0008287414,2.800513e-7,0.0001216202,0.000053489475,0.0003260119,0.00025303144,0.00023115572,0.9981679],"genre_scores_gemma":[0.0000060751236,0.0000038081434,0.000009084745,0.000033274206,0.00036904096,0.000024182682,0.00061548955,0.00008889372,0.99885017],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99872863,0.00003646739,0.0003824062,0.00046050598,0.00002064144,0.00037132506],"domain_scores_gemma":[0.999154,0.000063426494,0.0001236494,0.0005277277,0.000078929676,0.00005228518],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000090925,0.00044553858,0.00056885823,0.00024912952,0.00018628006,0.00003578,0.00027320362,0.000880012,0.99940705],"category_scores_gemma":[0.000013758456,0.00042344476,0.00023175112,0.00004013662,0.000079939375,0.00006103622,0.00011882317,0.0004783277,0.998641],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021500597,0.000042977517,1.725571e-8,0.000010594115,0.0003035382,0.0000032498076,0.000007020007,0.0000012392344,0.0025897732,0.00017940554,0.5319957,0.4646515],"study_design_scores_gemma":[0.00040205917,0.00030378014,0.0000027701449,0.00008110765,0.00012991286,0.00009471917,1.934631e-7,1.3383281e-7,0.00033845502,0.00013108827,0.99803543,0.00048033564],"about_ca_topic_score_codex":0.000053796382,"about_ca_topic_score_gemma":0.0000016857734,"teacher_disagreement_score":0.46603975,"about_ca_system_score_codex":0.000051462823,"about_ca_system_score_gemma":0.00005761788,"threshold_uncertainty_score":0.9998217},"labels":[],"label_agreement":null},{"id":"W4406656972","doi":"10.1016/b978-0-443-10303-2.50109-0","title":"10.1016/b978-0-443-10303-2.50109-0","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Gas gangrene; Microbiology; Biology","score_opus":0.008891772107928209,"score_gpt":0.18196168010789415,"score_spread":0.17306990799996594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406656972","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000018658884,0.0008077994,2.7247333e-7,0.00012048376,0.000054867665,0.00032463213,0.00025354387,0.00023120354,0.99818856],"genre_scores_gemma":[0.0000072288813,0.0000036948047,0.00000804314,0.00003362544,0.00036435807,0.000024033165,0.0006190516,0.000088945555,0.998851],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987311,0.00003664809,0.0003813205,0.00046141923,0.000020657677,0.00036885764],"domain_scores_gemma":[0.9991482,0.00006288506,0.00012342256,0.0005310676,0.0000823202,0.00005209902],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009135625,0.00044693894,0.00056949165,0.00024994244,0.00018758234,0.000035954054,0.00027393506,0.0008938765,0.9994068],"category_scores_gemma":[0.0000138655105,0.000423605,0.00023139927,0.000040906372,0.000080894664,0.000060569007,0.000118747565,0.0004908342,0.99863267],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021782596,0.000043541684,1.6597744e-8,0.000010518747,0.00030340542,0.000003363274,0.000007137469,0.0000011944185,0.0029127446,0.00017992879,0.5283743,0.46794602],"study_design_scores_gemma":[0.00040482325,0.00030532936,0.000003272298,0.00007843077,0.00012936803,0.000096261065,1.8927417e-7,1.3227553e-7,0.0003478735,0.00013567756,0.998018,0.00048061687],"about_ca_topic_score_codex":0.000056703248,"about_ca_topic_score_gemma":0.0000016783806,"teacher_disagreement_score":0.4696437,"about_ca_system_score_codex":0.000050314637,"about_ca_system_score_gemma":0.000058229973,"threshold_uncertainty_score":0.9998216},"labels":[],"label_agreement":null},{"id":"W4407290388","doi":"10.1186/s13054-025-05300-2","title":"Pertussis infection in critically ill infants: meta-analysis and validation of a mortality score","year":2025,"lang":"en","type":"review","venue":"Critical Care","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Critically ill; Intensive care medicine; Meta-analysis; Pediatrics; Critical illness; Emergency medicine; Internal medicine","score_opus":0.10281627991029707,"score_gpt":0.3997362682383976,"score_spread":0.2969199883281005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407290388","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001923762,0.9962521,0.00013936294,0.00006849823,0.00032317344,0.00033022242,0.0005666626,0.000028394972,0.00036779538],"genre_scores_gemma":[0.03391283,0.96476775,0.000036856178,0.00005410529,0.000026053618,0.00018512864,0.0009031274,0.000014378017,0.00009978036],"study_design_codex":"design_other","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99793637,0.000623744,0.0007599742,0.00043853684,0.000024888071,0.00021650158],"domain_scores_gemma":[0.99802566,0.0007556476,0.000087276145,0.0003548838,0.0007503184,0.000026239826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022727881,0.0002935744,0.0026334457,0.00063012587,0.000083629544,0.00003243906,0.000089349276,0.0006530757,0.000888581],"category_scores_gemma":[0.0024612623,0.0001994069,0.001273106,0.0008441744,0.00019451158,0.000099739445,0.0001064458,0.00035526126,0.00000953126],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068537745,0.0010095502,0.0247676,0.18768886,0.2005852,0.000015671649,0.0005508627,0.0000022095505,0.0002386197,0.01746523,0.00030037682,0.5673073],"study_design_scores_gemma":[0.0003332548,0.00016780663,0.0058637117,0.001693071,0.7884213,0.000027595199,0.00010841282,4.282837e-7,0.00028989825,0.00031479297,0.2021507,0.0006290642],"about_ca_topic_score_codex":0.0008446119,"about_ca_topic_score_gemma":0.0004253486,"teacher_disagreement_score":0.5878361,"about_ca_system_score_codex":0.00004722837,"about_ca_system_score_gemma":0.00011689136,"threshold_uncertainty_score":0.9729338},"labels":[],"label_agreement":null},{"id":"W4407482419","doi":"10.1016/j.bej.2025.109674","title":"A model based approach for monitoring Bordetella pertussis fermentation with an inline spectro-fluorescence probe","year":2025,"lang":"en","type":"article","venue":"Biochemical Engineering Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); National Research Council Canada; University of Waterloo","funders":"Mitacs; Sanofi","keywords":"Bordetella pertussis; Fermentation; Fluorescence; Microbiology; Chemistry; Biological system; Environmental science; Biochemical engineering; Biology; Biochemistry; Bacteria; Engineering; Physics; Optics","score_opus":0.012863798623011086,"score_gpt":0.24857271518591204,"score_spread":0.23570891656290094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407482419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5123719,0.00019496879,0.48693854,0.000074807656,0.00021702322,0.0001323878,0.0000061783862,0.00005026119,0.000013938667],"genre_scores_gemma":[0.9006742,0.000015041544,0.09896306,0.000010713322,0.00014424197,0.00003979272,0.00004440472,0.0000136406225,0.000094877985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994064,0.000012025291,0.00017951896,0.00016623955,0.000016206403,0.00021962225],"domain_scores_gemma":[0.99970895,0.000021520926,0.00004508485,0.00010427536,0.00008891259,0.00003125501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009991172,0.00013493166,0.00014685374,0.00011001257,0.00012437675,0.000045140856,0.00010536566,0.00012383716,0.000008023925],"category_scores_gemma":[0.000041512612,0.00010554235,0.000054986678,0.00012348608,0.000019394027,0.00008365415,0.0000140128195,0.00023183314,5.9702575e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023501029,0.00012208041,0.00035338994,0.00004005614,0.00005636164,1.7123143e-7,0.000020095715,0.010039987,0.9880626,0.00012682448,0.00008642106,0.0008569974],"study_design_scores_gemma":[0.0016892635,0.00023285435,0.0009878327,0.000109953995,0.00006543676,0.000056798683,0.000032514636,0.18436818,0.811947,0.0000263335,0.0002924062,0.00019146081],"about_ca_topic_score_codex":0.0000033376846,"about_ca_topic_score_gemma":9.356778e-8,"teacher_disagreement_score":0.38830233,"about_ca_system_score_codex":0.00006571807,"about_ca_system_score_gemma":0.00007037002,"threshold_uncertainty_score":0.43038923},"labels":[],"label_agreement":null},{"id":"W4407684815","doi":"10.1016/j.lana.2025.101033","title":"Assessing the impact of revising MenACWY vaccination schedule for adolescents in the United States: a modelling study","year":2025,"lang":"en","type":"article","venue":"The Lancet Regional Health - Americas","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"York University; University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Dairy Commission; Canada Foundation for Innovation; Centers for Disease Control and Prevention; Notsew Orm Sands Foundation; Sanofi","keywords":"Schedule; Vaccination; Psychology; Medicine; Computer science; Immunology","score_opus":0.13331005558685388,"score_gpt":0.4532286321898707,"score_spread":0.3199185766030168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407684815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9827834,0.00086919067,0.0061920686,0.008974658,0.00014189679,0.0009780017,0.000010570215,0.000017577604,0.00003264036],"genre_scores_gemma":[0.99828506,0.00035530454,0.00006220641,0.0010645556,0.00006769784,0.00006645828,0.00006645178,0.000006825047,0.000025450985],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99840057,0.00081895245,0.0003392437,0.00014437629,0.00002573276,0.00027109738],"domain_scores_gemma":[0.9988145,0.0005078313,0.00026890927,0.00029588473,0.000105533996,0.000007323298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014092945,0.00011260474,0.00030869266,0.00011367615,0.00046119615,0.000037776823,0.00026038292,0.000040970117,0.000007598795],"category_scores_gemma":[0.00004607496,0.000051705592,0.00007811268,0.00063432765,0.000057851765,0.00007600785,0.000033903507,0.00026756315,0.0000019023752],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00841526,0.010762324,0.39103124,0.002201268,0.0026436702,0.000002750314,0.076758176,0.2575941,0.011480458,0.017460467,0.106550284,0.115100004],"study_design_scores_gemma":[0.009995003,0.0023448863,0.8693314,0.0018595961,0.00019497296,0.000058700287,0.037631553,0.046309248,0.00016830703,0.0048974706,0.026749691,0.0004591564],"about_ca_topic_score_codex":0.0047947634,"about_ca_topic_score_gemma":0.000069721194,"teacher_disagreement_score":0.47830018,"about_ca_system_score_codex":0.000094450384,"about_ca_system_score_gemma":0.00014795062,"threshold_uncertainty_score":0.724828},"labels":[],"label_agreement":null},{"id":"W4407724629","doi":"10.1097/inf.0000000000004759","title":"Epidemiology of Febrile Seizures During the Covid-19 Pandemic: A Canadian Immunization Monitoring Program–Active (IMPACT) Study","year":2025,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Children's Hospital; SickKids Foundation; University of Toronto; Dalhousie University; BC Children's Hospital; Hospital for Sick Children; University of British Columbia; Saskatchewan Health Authority; University of Calgary; University of Alberta","funders":"Public Health Agency of Canada","keywords":"Medicine; Epidemiology; Vaccination; Pandemic; Immunization; Coronavirus disease 2019 (COVID-19); Pediatrics; Epidemiological surveillance; Febrile seizure; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Adverse effect; Virology; Immunology; Internal medicine; Epilepsy; Antibody; Psychiatry","score_opus":0.027565289395609528,"score_gpt":0.34249491122459663,"score_spread":0.3149296218289871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407724629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937485,0.0029150336,0.000057355228,0.0003696405,0.0019058414,0.00079351146,0.000044728982,0.00007895382,0.00008644588],"genre_scores_gemma":[0.9984019,0.0006652774,0.00000231452,0.00008157855,0.000537961,0.00009436627,0.0000090340045,0.000013177533,0.00019443205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745846,0.0013817747,0.0005118178,0.0001759559,0.000027501885,0.00044447885],"domain_scores_gemma":[0.99807763,0.00084510935,0.00038120965,0.00032757936,0.00022149316,0.00014696296],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0010463445,0.00019948723,0.00031420795,0.00041830514,0.0019147004,0.000026817237,0.00029294877,0.00012959198,0.00021956809],"category_scores_gemma":[0.0018322825,0.00011371879,0.00020661009,0.00065764604,0.00011344396,0.0001108325,0.000093044604,0.0006552278,0.000014405714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023498037,0.00028380606,0.99592364,0.000022390865,0.00044054538,0.0000037306033,0.00060169084,0.0010969993,0.00020162197,0.00003524352,0.00044946055,0.0007059133],"study_design_scores_gemma":[0.0012154017,0.00020034818,0.99550116,0.0000075748867,0.00048924395,0.0005028099,0.0006350816,0.000005825861,0.00001572993,0.0005676382,0.000746327,0.00011283674],"about_ca_topic_score_codex":0.048764586,"about_ca_topic_score_gemma":0.0063719098,"teacher_disagreement_score":0.04239268,"about_ca_system_score_codex":0.0004990227,"about_ca_system_score_gemma":0.0012057973,"threshold_uncertainty_score":0.99938464},"labels":[],"label_agreement":null},{"id":"W4407808112","doi":"10.3390/pathogens14030210","title":"Inflammatory Responses to Non-Typeable Haemophilus influenzae Clinical Isolates from Invasive and Non-Invasive Infections","year":2025,"lang":"en","type":"article","venue":"Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University","funders":"Canadian Immunization Research Network","keywords":"Haemophilus influenzae; Immunology; Immune system; Innate immune system; Biology; Toll-like receptor; Sepsis; Disease; Meningitis; Inflammation; Acquired immune system; Microbiology; Medicine; Antibiotics; Pathology","score_opus":0.019025117581616145,"score_gpt":0.28987548832256915,"score_spread":0.27085037074095303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407808112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99510527,0.0005786753,0.00017236636,0.00039264953,0.0020089564,0.00041322145,0.00022219833,0.00009434049,0.0010123346],"genre_scores_gemma":[0.9970164,0.000408975,0.00014873188,0.0007178991,0.00015175715,0.0000784911,0.000064193446,0.000018469227,0.0013951106],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984867,0.00024200998,0.00049764366,0.0004490885,0.000012411828,0.00031212787],"domain_scores_gemma":[0.9980225,0.0012313491,0.00010740327,0.000399426,0.00017728031,0.00006204113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002798253,0.00022966525,0.00040888152,0.00027880477,0.00043018008,0.000051005074,0.00013842707,0.0003913764,0.0002396265],"category_scores_gemma":[0.001115616,0.00021514874,0.00012512064,0.0002958754,0.00013963938,0.00012769338,0.00026568084,0.00031407567,0.00063570385],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024020713,0.00011259408,0.36469573,0.000016050286,0.00026337255,0.0000046330933,0.0002891179,0.00000546474,0.628354,0.000098403994,0.004890885,0.0010295076],"study_design_scores_gemma":[0.0017353054,0.0004710232,0.84444875,0.00018417783,0.0001991177,0.00003020696,0.00027515588,0.000003956008,0.089334406,0.00068864354,0.06225771,0.00037154503],"about_ca_topic_score_codex":0.0006468705,"about_ca_topic_score_gemma":0.0015114789,"teacher_disagreement_score":0.53901964,"about_ca_system_score_codex":0.0000352495,"about_ca_system_score_gemma":0.00027526988,"threshold_uncertainty_score":0.8773511},"labels":[],"label_agreement":null},{"id":"W4408073164","doi":"10.1016/j.jiph.2025.102728","title":"Genetically distinct Hajj and South American-related strains of serogroup W Neisseria meningitidis causing invasive meningococcal disease in Ontario, Canada, January 1, 2015 to June 30, 2024","year":2025,"lang":"en","type":"article","venue":"Journal of Infection and Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; Public Health Agency of Canada","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Neisseriaceae; Microbiology; Virology; Medicine; Serotype; Biology; Bacteria; Antibiotics; Genetics","score_opus":0.015417969346103944,"score_gpt":0.27274498672856684,"score_spread":0.2573270173824629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408073164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99363565,0.00039382261,0.00020473023,0.0044124345,0.0010532535,0.00017631768,0.000023387787,0.000006682936,0.00009370671],"genre_scores_gemma":[0.99919796,0.00011166655,0.000043635395,0.00024759202,0.000023631545,0.0000040021264,0.0000143176085,0.000006022136,0.0003511867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986737,0.00022943983,0.000647832,0.00015517605,0.000025265994,0.00026862355],"domain_scores_gemma":[0.9991206,0.00008001793,0.00035295618,0.00008295104,0.00016631154,0.00019716423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046166225,0.00013441588,0.0004011721,0.00035714428,0.00015303597,0.0000384233,0.00003593434,0.00007197203,0.00022828934],"category_scores_gemma":[0.00020715682,0.00011705276,0.000044023716,0.00035491012,0.000084762294,0.00011084191,0.000047473826,0.0003584789,7.2149817e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019533129,0.00020420045,0.9783752,0.000089060384,0.00023607876,0.000006662662,0.0016211645,0.000042095628,0.008502508,0.0004215051,0.004727995,0.0055782157],"study_design_scores_gemma":[0.0009363997,0.0004095986,0.98502636,0.0001395692,0.000029641833,0.00006863472,0.00037323535,0.0000062643717,0.00007609563,0.00004507143,0.0127901845,0.000098967954],"about_ca_topic_score_codex":0.6941978,"about_ca_topic_score_gemma":0.91561556,"teacher_disagreement_score":0.22141777,"about_ca_system_score_codex":0.00028903194,"about_ca_system_score_gemma":0.003317941,"threshold_uncertainty_score":0.5885885},"labels":[],"label_agreement":null},{"id":"W4408368098","doi":"10.1099/jmm.0.001979","title":"Geographical and temporal variations of serogroups and clonal types of Neisseria meningitidis involved in culture-confirmed invasive meningococcal disease in Canada, 2015–2023","year":2025,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Yukon Health and Social Services; Government of Prince Edward Island; Moncton Hospital; Institut National de Santé Publique du Québec; Government of Northwest Territories; Provincial Laboratory of Public Health; Public Health Ontario; BC Centre for Disease Control; Nova Scotia Health Authority; Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Neisseria meningitidis; Meningococcal disease; Epidemiology; Multilocus sequence typing; Molecular epidemiology; Meningococcal vaccine; Serotype; Meningitis; Biology; Medicine; Virology; Internal medicine; Genotype; Pediatrics; Bacteria","score_opus":0.00708860850507686,"score_gpt":0.24628300646096915,"score_spread":0.23919439795589229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408368098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99275887,0.0045266966,0.000021636162,0.0020093764,0.00050567626,0.000103777624,0.00006208264,0.0000018311761,0.000010075677],"genre_scores_gemma":[0.99911135,0.000642255,0.00006330335,0.000082370796,0.000024041583,0.0000038896424,0.000046743742,0.000003701799,0.000022336166],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99861753,0.00027883562,0.0007539948,0.00014226387,0.000021340644,0.00018604213],"domain_scores_gemma":[0.9991142,0.00034525595,0.00028947124,0.0000726474,0.00011366416,0.00006473755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004708207,0.0001199966,0.0005321316,0.00029935266,0.00003205186,0.0000040839086,0.0001420271,0.00028339034,0.00018937181],"category_scores_gemma":[0.00048273642,0.00009272088,0.000052857595,0.00024718186,0.0002718517,0.000047612535,0.000096417774,0.00041205116,2.948987e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005331161,0.00015595433,0.66372246,0.00006775598,0.00020253207,0.000010842574,0.00014834563,0.0000025270438,0.33251375,0.0010048106,0.0013169997,0.0003208822],"study_design_scores_gemma":[0.005538418,0.00041570296,0.9803986,0.0005523097,0.000121130106,0.00019023652,0.0004539481,0.000022999106,0.006793131,0.0007680212,0.0045806183,0.00016486329],"about_ca_topic_score_codex":0.13474406,"about_ca_topic_score_gemma":0.3973813,"teacher_disagreement_score":0.3257206,"about_ca_system_score_codex":0.00004479318,"about_ca_system_score_gemma":0.001138481,"threshold_uncertainty_score":0.87101775},"labels":[],"label_agreement":null},{"id":"W4408626238","doi":"10.1080/21645515.2025.2477965","title":"Joint consensus on reducing the burden of invasive meningococcal disease in the Asia-Pacific region","year":2025,"lang":"en","type":"review","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Burden of disease; Meningococcal disease; Geography; Environmental health; Neisseria meningitidis; Population; Biology","score_opus":0.07065127703994582,"score_gpt":0.3244086095439133,"score_spread":0.2537573325039675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408626238","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0039546955,0.9916468,0.00000225177,0.00088102376,0.001074339,0.0016825276,0.000043383217,0.000048635884,0.0006663094],"genre_scores_gemma":[0.030579727,0.9655711,0.000003465018,0.00007510052,0.0002810755,0.00026858159,0.00019986312,0.00006340608,0.0029576714],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964839,0.001388606,0.0011937157,0.00047569914,0.000044508957,0.00041357533],"domain_scores_gemma":[0.99649155,0.001265588,0.00075995724,0.0013449026,0.00012217922,0.000015795114],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005268497,0.0006044371,0.0014057346,0.00042362674,0.0005135339,0.00006742672,0.0007738033,0.0004628857,0.00013522491],"category_scores_gemma":[0.00012634648,0.00033345295,0.00063938485,0.0005454024,0.00017564466,0.000031191394,0.0001335594,0.0009895547,0.000049039998],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012685991,0.0019316052,0.00014013515,0.025627429,0.0060394416,0.00005923192,0.010199485,0.00010508921,0.014618712,0.02318899,0.027711587,0.8891097],"study_design_scores_gemma":[0.0008732599,0.00022142428,0.0002312198,0.012225554,0.0011329454,0.000093435934,0.000527101,6.953327e-7,0.00013387256,0.00019423704,0.98397803,0.00038820555],"about_ca_topic_score_codex":0.0004008991,"about_ca_topic_score_gemma":0.000029111317,"teacher_disagreement_score":0.95626646,"about_ca_system_score_codex":0.000096308,"about_ca_system_score_gemma":0.0003481407,"threshold_uncertainty_score":0.9999117},"labels":[],"label_agreement":null},{"id":"W4408776083","doi":"10.1016/j.vaccine.2025.127026","title":"Molecular and WGS-based characterization of invasive Neisseria meningitidis isolates collected in Belgium (2016–2022) and MenB-FHbp vaccine coverage estimation of serogroup B","year":2025,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada; Pfizer","keywords":"Neisseria meningitidis; Neisseriaceae; Neisseria; Microbiology; Virology; Biology; Bacteria; Genetics; Antibiotics","score_opus":0.003845186072473293,"score_gpt":0.2170563144030538,"score_spread":0.2132111283305805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408776083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970368,0.00083574245,0.001124992,0.0003064633,0.00021347978,0.0003745784,0.000054518674,0.000025690615,0.000027711088],"genre_scores_gemma":[0.99904764,0.00025082214,0.00008744282,0.00003859566,0.000005982664,0.000019012175,0.0004075876,0.000011200807,0.00013171072],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906826,0.00011429279,0.00043700208,0.00022137737,0.000010295886,0.00014876146],"domain_scores_gemma":[0.9993695,0.00012291342,0.00021329282,0.0001590181,0.00012067835,0.000014622486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001363345,0.00015990401,0.00039645992,0.00036634112,0.00006666181,0.000012231233,0.000057757712,0.00017540428,0.00013019578],"category_scores_gemma":[0.00012304951,0.00015143486,0.000030039368,0.0005395271,0.000011973566,0.00012796841,0.000058250822,0.00009930474,0.0000013128786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050007086,0.000121684265,0.030516861,0.00014769062,0.00009688934,4.726672e-7,0.000100323945,0.000047997863,0.9667101,0.00031360492,0.000052685864,0.0013916355],"study_design_scores_gemma":[0.0034503106,0.00029767564,0.32756612,0.00018248925,0.00006729131,0.000006564579,0.000020231495,0.00037054956,0.6675693,0.000139819,0.00022213339,0.00010752243],"about_ca_topic_score_codex":0.00025922304,"about_ca_topic_score_gemma":0.000117204494,"teacher_disagreement_score":0.2991408,"about_ca_system_score_codex":0.000020303536,"about_ca_system_score_gemma":0.00006458446,"threshold_uncertainty_score":0.61753345},"labels":[],"label_agreement":null},{"id":"W4408846843","doi":"10.21203/rs.3.rs-5678578/v1","title":"Cerebral Hemorrhage in Children with Escherichia coli Meningitis: A seven-year Retrospective Study","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Escherichia coli; Meningitis; Medicine; Retrospective cohort study; Pediatrics; Microbiology; Internal medicine; Biology; Gene; Genetics","score_opus":0.021840990873466335,"score_gpt":0.3274816490680609,"score_spread":0.3056406581945945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408846843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931151,0.00049712055,0.000010411936,0.00012952441,0.00041072324,0.002957538,0.0004217355,0.0001214896,0.002336323],"genre_scores_gemma":[0.99421686,0.000041893618,0.000086327025,0.0000061755836,0.00012224821,0.0007115447,0.00036460406,0.000033928965,0.0044164364],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99659926,0.0012511862,0.0003657669,0.000924509,0.00010063807,0.00075861963],"domain_scores_gemma":[0.9985375,0.000091330025,0.00010573771,0.000783662,0.00043962488,0.000042167212],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010242277,0.0003584841,0.0006581225,0.0006916776,0.0003573285,0.00012940366,0.0004825146,0.00059606985,0.0009478863],"category_scores_gemma":[0.00017652218,0.00030662492,0.00011003898,0.00085630704,0.00016434137,0.00008346613,0.0013011589,0.0030992206,0.00015421306],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005188793,0.0012268518,0.9920457,0.000116585376,0.0006996581,0.00001552034,0.0012772332,0.00002376896,0.0023603262,0.00029950138,0.0010270082,0.0003889684],"study_design_scores_gemma":[0.0030218512,0.0013048685,0.9909774,0.00036920706,0.000053914897,0.000021554093,0.0020949298,0.000005260336,0.001216622,0.0002475841,0.00033247774,0.00035430185],"about_ca_topic_score_codex":0.0065597384,"about_ca_topic_score_gemma":0.0022659653,"teacher_disagreement_score":0.004293773,"about_ca_system_score_codex":0.00040060637,"about_ca_system_score_gemma":0.00054048304,"threshold_uncertainty_score":0.99996537},"labels":[],"label_agreement":null},{"id":"W4409021380","doi":"10.1016/j.vaccine.2025.127030","title":"Characterization of Canadian Neisseria meningitidis serogroup B isolates and factor-H binding protein expression, data from the Canadian Immunization Monitoring Program Active (IMPACT), 2013–2020","year":2025,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Nova Scotia Health Authority; University of Toronto; British Columbia Children's Hospital; Dalhousie University; University of Calgary; Children's Hospital of Eastern Ontario","funders":"Société Canadienne de Pédiatrie; Pfizer","keywords":"Neisseria meningitidis; Neisseriaceae; Immunization; Virology; Microbiology; Biology; Serotype; Bacteria; Antibody; Genetics; Antibiotics","score_opus":0.021762275421125885,"score_gpt":0.27142655470483457,"score_spread":0.24966427928370868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409021380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964627,0.00035259727,0.0000108682925,0.0008753707,0.00056581903,0.0006712333,0.0009925908,0.000042644548,0.00002615887],"genre_scores_gemma":[0.9957837,0.00018959289,0.00005980554,0.000008973785,0.0000708559,0.000032646665,0.003657395,0.000015487778,0.00018154255],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990903,0.000110135654,0.00025156635,0.00026177315,0.000009654536,0.00027655385],"domain_scores_gemma":[0.99919486,0.000049553746,0.0001373692,0.00044051732,0.00011871975,0.00005900165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092108516,0.00017003542,0.0002108153,0.00031510647,0.00055757747,0.00009249046,0.0002815454,0.0002026281,0.00034311437],"category_scores_gemma":[0.0000774534,0.00012559327,0.000025181367,0.00060188357,0.000015166304,0.000382122,0.00011950298,0.0001883818,0.000010762195],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004965983,0.000020708729,0.09493581,0.000007406483,0.0001336271,1.4479801e-7,0.00025434943,4.9962694e-7,0.90063447,0.000012017727,0.00029240808,0.00365888],"study_design_scores_gemma":[0.000520775,0.00007141884,0.6120227,0.00019376917,0.000043136148,0.0000030198885,0.00019581718,0.00002675547,0.37027147,0.000011284034,0.016506137,0.0001337012],"about_ca_topic_score_codex":0.8373086,"about_ca_topic_score_gemma":0.73279864,"teacher_disagreement_score":0.530363,"about_ca_system_score_codex":0.000094504634,"about_ca_system_score_gemma":0.00026176867,"threshold_uncertainty_score":0.51215446},"labels":[],"label_agreement":null},{"id":"W4409106913","doi":"10.1073/pnas.2419457122","title":"Structural basis for neutralizing antibody binding to pertussis toxin","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"National Institute of General Medical Sciences; Cancer Prevention and Research Institute of Texas; National Institute of Allergy and Infectious Diseases; Welch Foundation","keywords":"Epitope; Pertussis toxin; Bordetella pertussis; Glycan; Antibody; Neutralizing antibody; Antigen; Neutralization; Biology; Virology; Sialic acid; Chemistry; Molecular biology; Receptor; Biochemistry; G protein; Glycoprotein; Immunology","score_opus":0.04130295343037115,"score_gpt":0.34433116256398394,"score_spread":0.3030282091336128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409106913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99386346,0.00007338902,0.000002345093,0.004557417,0.00014595428,0.00017472322,0.000030873067,0.000009777936,0.00114206],"genre_scores_gemma":[0.99875665,0.0000066577486,0.00043153387,0.00018654083,0.000028423685,0.000011775493,4.0562185e-7,0.0000016897668,0.00057630945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99947375,0.00000444283,0.00020311591,0.0001531267,0.000039935243,0.00012562936],"domain_scores_gemma":[0.9995711,0.00012238657,0.00013146889,0.0000049616556,0.00016335509,0.000006737483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043869464,0.0000629997,0.00012328735,0.00021874746,0.00035635737,0.000018144641,0.00035043436,0.00008102561,0.000029709376],"category_scores_gemma":[0.00040590353,0.000040090526,0.000071508606,0.00058523146,0.00017928812,0.00018280515,0.000088265624,0.00006986078,0.0000012954805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019173924,0.000008419604,0.007400989,0.00002558751,0.000022565993,8.839915e-11,0.00006683341,0.000007710103,0.95012695,0.040812746,0.0010875236,0.00042150985],"study_design_scores_gemma":[0.00015722895,0.00003972979,0.10415634,0.000091965216,0.0000159636,0.0000027590652,0.00016542342,0.000024444114,0.8890483,0.00389693,0.0023489431,0.00005199506],"about_ca_topic_score_codex":0.000014545838,"about_ca_topic_score_gemma":1.5160384e-7,"teacher_disagreement_score":0.09675535,"about_ca_system_score_codex":0.000019445626,"about_ca_system_score_gemma":0.000020201329,"threshold_uncertainty_score":0.27408487},"labels":[],"label_agreement":null},{"id":"W4409226820","doi":"10.1212/wnl.0000000000212488","title":"Prevalence and Outcomes of Pediatric Central Nervous System Infections: a Population-Based Analysis (P8-6.003)","year":2025,"lang":"en","type":"article","venue":"Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; University of Alberta","funders":"","keywords":"Medicine; Central nervous system; Pediatrics; Population; Intensive care medicine; Environmental health; Internal medicine","score_opus":0.006288888814508514,"score_gpt":0.23612623774684363,"score_spread":0.22983734893233512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409226820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974976,0.0005029562,0.0002547051,0.00023660612,0.0011289992,0.00014951016,0.000029324905,0.00007356156,0.00012671991],"genre_scores_gemma":[0.99964285,0.00005058186,0.000009177894,0.00010438923,0.000022613354,0.00002153641,0.000027547621,0.0000038863295,0.000117442934],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990622,0.00022249612,0.000294914,0.00022630751,0.0000091830325,0.00018489963],"domain_scores_gemma":[0.9993667,0.00024346939,0.00012398875,0.00020251649,0.00005108186,0.000012255056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000079244186,0.00011064948,0.00032911688,0.00046654127,0.00012001295,0.00000724378,0.000070991504,0.00019502649,0.00009565204],"category_scores_gemma":[0.00007502193,0.00009653949,0.000107025044,0.0005605254,0.00004019375,0.000036834852,0.000036033347,0.0001318391,0.0000064621913],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006459314,0.00007935271,0.9964217,0.00008766619,0.0002919798,4.2555993e-7,0.000009363524,0.000203672,0.0012406216,0.0013476675,0.000052442167,0.00020053063],"study_design_scores_gemma":[0.00046072635,0.00019523084,0.9977996,0.0000025176898,0.0008818268,0.0000072315715,0.000002040443,0.000081667415,0.00015420273,0.000020289273,0.00033390208,0.000060763883],"about_ca_topic_score_codex":0.001350314,"about_ca_topic_score_gemma":0.00026078417,"teacher_disagreement_score":0.0021452075,"about_ca_system_score_codex":0.000010688746,"about_ca_system_score_gemma":0.000032874043,"threshold_uncertainty_score":0.3936766},"labels":[],"label_agreement":null},{"id":"W4409504763","doi":"10.1128/msphere.00940-24","title":"Meningococcal vaccine 4CMenB elicits a robust cellular immune response that targets but is not consistently protective against <i>Neisseria gonorrhoeae</i> during murine vaginal infection","year":2025,"lang":"en","type":"article","venue":"mSphere","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Neisseria gonorrhoeae; Immunology; Immune system; Gonorrhea; Biology; Humoral immunity; Vaccination; Pathogen; Acquired immune system; Cellular immunity; Virology; Microbiology","score_opus":0.011696186885403114,"score_gpt":0.22768682071027435,"score_spread":0.21599063382487124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409504763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929243,0.0017816197,0.0005879924,0.0008613092,0.0017481357,0.00092265726,0.000060014474,0.00029577818,0.00081822847],"genre_scores_gemma":[0.9908968,0.00014870775,0.000072479656,0.00020659814,0.00009731328,0.00026421956,0.000087649394,0.000042602718,0.008183609],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99766886,0.0005403097,0.0005446642,0.0006346539,0.000021040758,0.0005904581],"domain_scores_gemma":[0.99884444,0.0001291957,0.00024217686,0.0005180177,0.00022021838,0.000045935656],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00044679703,0.0004531728,0.0005816655,0.00021606639,0.0007493499,0.00008441463,0.00019804033,0.00044093688,0.0014057263],"category_scores_gemma":[0.00013246335,0.00042867343,0.0002274385,0.00047413053,0.000073437855,0.00024506103,0.00023362107,0.0006021591,0.0002901879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048076534,0.00024307416,0.006648487,0.00009477904,0.0004839189,0.000005042783,0.00024118154,0.00006423377,0.9845996,0.00004339794,0.0010730295,0.00169559],"study_design_scores_gemma":[0.004228993,0.0002863306,0.11303137,0.0001917131,0.00012430231,0.00008519304,0.00023430581,0.000022556816,0.8352125,0.000030095216,0.04613254,0.0004200645],"about_ca_topic_score_codex":0.0010408895,"about_ca_topic_score_gemma":0.00017930026,"teacher_disagreement_score":0.14938708,"about_ca_system_score_codex":0.00019403025,"about_ca_system_score_gemma":0.00012773176,"threshold_uncertainty_score":0.9998165},"labels":[],"label_agreement":null},{"id":"W4409578001","doi":"10.1016/j.xpro.2025.103773","title":"Protocol for pneumococcal meningitis induction in mice via non-surgical intracisternal injection","year":2025,"lang":"en","type":"article","venue":"STAR Protocols","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canada Foundation for Innovation","keywords":"Medicine; Protocol (science); Meningitis; Surgery; Pathology","score_opus":0.026230198745461585,"score_gpt":0.35293812458655877,"score_spread":0.3267079258410972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409578001","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16806036,0.0000015031887,0.0016835501,0.00012694184,0.0004277586,0.8286237,0.000015332524,0.000080501886,0.0009803065],"genre_scores_gemma":[0.067967646,1.0483497e-7,0.00017375387,0.00001017121,0.00012352224,0.93049634,0.00002494899,0.0000119324495,0.0011915585],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99881643,0.00012611467,0.00043377982,0.00031564105,0.000015308142,0.00029272886],"domain_scores_gemma":[0.99955547,0.000059726204,0.00011762445,0.00015059218,0.000101670696,0.000014913993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030758927,0.00017171261,0.00025486216,0.000216564,0.00018291881,0.00004250827,0.00011796486,0.0003106219,0.0002798553],"category_scores_gemma":[0.000033019885,0.00015355472,0.000085143285,0.00026410303,0.000052393836,0.00017471903,0.000053863,0.0003010961,0.00004310997],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002697945,0.00043823538,0.0032847014,0.00023014455,0.000060998875,0.0000018261273,0.00010741963,0.000009428718,0.9651549,0.0005700696,0.0010295134,0.026414819],"study_design_scores_gemma":[0.012313792,0.0015387438,0.01769909,0.00048028975,0.000015491576,0.00016523454,0.0000524838,0.000049532428,0.44746208,0.0014832284,0.51842123,0.00031882594],"about_ca_topic_score_codex":0.00020628583,"about_ca_topic_score_gemma":0.00011922147,"teacher_disagreement_score":0.5176928,"about_ca_system_score_codex":0.00010432299,"about_ca_system_score_gemma":0.00008572109,"threshold_uncertainty_score":0.62617797},"labels":[],"label_agreement":null},{"id":"W4409886495","doi":"10.1099/mic.0.001558","title":"Co-purification of the GroEL chaperone during outer membrane vesicle purification: insights from Aeromonas salmonicida subsp. salmonicida","year":2025,"lang":"en","type":"article","venue":"Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec; Université Laval","keywords":"GroEL; Aeromonas salmonicida; Bacterial outer membrane; Microbiology; Biology; Ultracentrifuge; Lysis; Chaperonin; Periplasmic space; GroES; Bacteria; Vesicle; Biochemistry; Membrane; Chemistry; Chromatography; Escherichia coli; Protein folding","score_opus":0.009794530715237754,"score_gpt":0.22843975447049675,"score_spread":0.218645223755259,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409886495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931198,0.0027064509,0.00004523571,0.0009960007,0.001887385,0.00038513078,0.00012600824,0.000077911005,0.000656106],"genre_scores_gemma":[0.99702597,0.00011867083,0.000045154164,0.00014790951,0.00007134104,0.000051889278,0.00043800112,0.000017737457,0.0020833544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982614,0.00034620077,0.0005903338,0.00047580563,0.000012135571,0.0003141314],"domain_scores_gemma":[0.99870425,0.00013206768,0.00027354437,0.0007520802,0.00012227106,0.000015767639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001059361,0.0002469717,0.00043729224,0.00014565799,0.00037152253,0.000017319113,0.00047203034,0.00045705817,0.00055803685],"category_scores_gemma":[0.00003950847,0.00018409325,0.00015546745,0.00031313908,0.00030665522,0.00009624316,0.00010585902,0.0003076173,0.00026028292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014590514,0.00018226144,0.004098008,0.000022096827,0.00021731977,4.6936339e-7,0.00033142033,0.0000036448619,0.9927466,0.0012956489,0.0006368515,0.00031977688],"study_design_scores_gemma":[0.0010825191,0.000044212724,0.11914019,0.00003991588,0.00006674017,0.000036667367,0.00008046828,9.1146586e-7,0.8527639,0.00012754792,0.026465807,0.0001511525],"about_ca_topic_score_codex":0.000632636,"about_ca_topic_score_gemma":0.00025322457,"teacher_disagreement_score":0.13998273,"about_ca_system_score_codex":0.000087582375,"about_ca_system_score_gemma":0.00007496707,"threshold_uncertainty_score":0.7507105},"labels":[],"label_agreement":null},{"id":"W4410031972","doi":"10.1016/j.jns.2025.123525","title":"Clinicopathological heterogeneity and complexity of polymicrobial brain abscesses","year":2025,"lang":"en","type":"article","venue":"Journal of the Neurological Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"McMaster University","keywords":"Neuroscience; Medicine; Biology","score_opus":0.06447791399363365,"score_gpt":0.32669907128053954,"score_spread":0.26222115728690587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410031972","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98985136,0.0005098403,0.000020795285,0.008016837,0.001374536,0.00004729693,0.0000048741354,0.0000052688915,0.00016921615],"genre_scores_gemma":[0.9990056,0.000058060723,0.00005797579,0.0008063954,0.000029163219,3.3538427e-7,1.1053394e-7,7.611125e-7,0.00004160681],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99897885,0.00040344757,0.00035226042,0.00011800842,0.000021028667,0.00012640601],"domain_scores_gemma":[0.99919224,0.0003813328,0.00028042775,0.000078278164,0.00005592796,0.000011793916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007445543,0.00006965746,0.00023826657,0.00005195687,0.000248783,0.000019445053,0.00037101939,0.00010452352,0.00007428922],"category_scores_gemma":[0.00057438324,0.000031803826,0.000116182375,0.00020671652,0.0015801822,0.000058088313,0.00020691543,0.00022548766,0.000001426984],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019975238,0.00018249755,0.30686033,0.000006520036,0.00001758083,0.0000012295378,0.000012184971,0.000009115663,0.68702245,0.002736034,0.0012738408,0.0016784761],"study_design_scores_gemma":[0.0004680091,0.0011803258,0.93727106,0.000018011955,0.00002643688,0.00034158377,0.000012156324,0.0000029494365,0.050361186,0.0047623836,0.005507985,0.000047903784],"about_ca_topic_score_codex":0.000011135457,"about_ca_topic_score_gemma":0.000014891882,"teacher_disagreement_score":0.63666123,"about_ca_system_score_codex":0.0000027016742,"about_ca_system_score_gemma":0.000037933525,"threshold_uncertainty_score":0.5822247},"labels":[],"label_agreement":null},{"id":"W4410140295","doi":"10.1126/scitranslmed.adn1441","title":"A phase 1/2a clinical trial to assess safety and immunogenicity of an adenoviral-vectored capsular group B meningococcal vaccine","year":2025,"lang":"en","type":"article","venue":"Science Translational Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Immunogenicity; Vaccination; Antigen; Antibody; Heterologous; Virology; Medicine; Biology; Immunology; Gene","score_opus":0.06016231361052711,"score_gpt":0.40999991652241674,"score_spread":0.34983760291188964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410140295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911169,0.00045174212,0.0038427627,0.0018493469,0.001887892,0.0005388209,0.000037525133,0.000031799787,0.00024323509],"genre_scores_gemma":[0.99909276,0.000033854325,0.00041807388,0.00011998064,0.00015344744,0.000014718474,0.00007721614,0.000004909931,0.00008502617],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982667,0.000198101,0.0007999211,0.00042155365,0.00007083245,0.00024289043],"domain_scores_gemma":[0.9990935,0.00027734146,0.00011761916,0.0002454169,0.00019707187,0.000069057656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002210788,0.00014578839,0.0004531044,0.0003170388,0.00031584455,0.000012111028,0.0002618576,0.000118020966,0.00035568868],"category_scores_gemma":[0.00040722388,0.000110998386,0.000060542792,0.0008085769,0.0006011551,0.00024164162,0.000042218093,0.00020573246,0.000004597235],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02007835,0.00056399446,0.0011524478,0.000010042506,0.000066970744,4.483059e-7,0.00021797011,0.000004460996,0.95576984,0.005147163,0.000044185148,0.016944127],"study_design_scores_gemma":[0.38067257,0.017721685,0.5021089,0.00035120326,0.00050420203,0.000076725286,0.00044553456,0.00042487544,0.06495039,0.0020950094,0.03001583,0.0006330968],"about_ca_topic_score_codex":0.000250402,"about_ca_topic_score_gemma":0.000085217136,"teacher_disagreement_score":0.89081943,"about_ca_system_score_codex":0.000019948706,"about_ca_system_score_gemma":0.00020804453,"threshold_uncertainty_score":0.45263827},"labels":[],"label_agreement":null},{"id":"W4410176643","doi":"10.1016/j.ijid.2025.107925","title":"Microbiology and long-term outcomes in community-acquired, nosocomial and post-neurosurgical meningitis with positive bacterial culture in Ontario, Canada: A population-based cohort study","year":2025,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Queen's University","funders":"Queen's University; Ontario Ministry of Health and Long-Term Care; Institute for Clinical Evaluative Sciences","keywords":"Bacterial meningitis; Term (time); Medicine; Meningitis; Population; Cohort; Cohort study; Intensive care medicine; Microbiology; Pediatrics; Biology; Environmental health; Internal medicine","score_opus":0.005046838986915628,"score_gpt":0.24470293139251972,"score_spread":0.2396560924056041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410176643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981638,0.00008982984,0.00000522108,0.0001924705,0.0011028762,0.00027800802,0.0001364819,0.000007746399,0.00002355376],"genre_scores_gemma":[0.99955374,0.000009205907,0.0000030196577,0.00012999077,0.000025744717,0.0000147865785,0.00021001468,0.000006086345,0.000047422058],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989015,0.00038089923,0.0004168405,0.00013861497,0.0000311515,0.00013099254],"domain_scores_gemma":[0.9991717,0.00028476154,0.00019584694,0.00007156817,0.00024917835,0.000026976886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012265345,0.00016074914,0.00039543404,0.00030279678,0.00011557567,0.00005685287,0.000117800744,0.00008847807,0.00009639873],"category_scores_gemma":[0.00010526767,0.00012466437,0.00004462459,0.00007578048,0.00006983296,0.00012472777,0.00006710271,0.0003197486,2.4987764e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012428974,0.0008457485,0.98727405,0.0000053687963,0.00046527604,0.0000821252,0.00022230057,0.000021957187,0.00966625,0.000017773817,0.000027157485,0.00012911085],"study_design_scores_gemma":[0.0056006745,0.0006275783,0.9927041,0.0000956,0.00008759939,0.0003939447,0.00010336256,3.76099e-7,0.00022094055,0.000012563765,0.000041811385,0.000111438196],"about_ca_topic_score_codex":0.64646196,"about_ca_topic_score_gemma":0.9577763,"teacher_disagreement_score":0.3113144,"about_ca_system_score_codex":0.00037516473,"about_ca_system_score_gemma":0.00041703228,"threshold_uncertainty_score":0.5083666},"labels":[],"label_agreement":null},{"id":"W4410220732","doi":"10.1101/2025.05.08.25327256","title":"Poor Surgical Outcomes Following <i>Paenibacillus</i> Infant Infectious Hydrocephalus","year":2025,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institutes of Health","keywords":"Hydrocephalus; Medicine; Intensive care medicine; Pediatrics; Surgery","score_opus":0.012771219237225786,"score_gpt":0.26906748559856664,"score_spread":0.25629626636134084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410220732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96945727,0.0021031813,0.000062700215,0.0005490376,0.016857613,0.00048017912,0.00015517844,0.00048521627,0.0098496135],"genre_scores_gemma":[0.9878945,0.0001786123,0.000023121785,0.00018049957,0.00015265605,0.00016023955,0.00030065342,0.000032036605,0.011077714],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99759805,0.00032269582,0.0007090589,0.0007683596,0.000039902505,0.0005619126],"domain_scores_gemma":[0.99858505,0.00029446944,0.00023816635,0.0007366945,0.00009890162,0.000046699693],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004394494,0.00057902356,0.0011061264,0.00034285703,0.00033528416,0.00007964638,0.00044713117,0.001155467,0.00080360693],"category_scores_gemma":[0.00019712512,0.00048122805,0.00085584837,0.0002406343,0.00008615801,0.0000807566,0.0010394108,0.0012385794,0.00049899233],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102917955,0.0004912934,0.94985175,0.00022216588,0.0028364586,0.000071858696,0.00026967266,0.00008767724,0.03629422,0.0009420209,0.0048307544,0.0039992095],"study_design_scores_gemma":[0.005385665,0.00019352161,0.10686855,0.0004242816,0.0009129455,0.00021175678,0.00004319359,0.000013553123,0.02239889,0.001119204,0.8608417,0.001586723],"about_ca_topic_score_codex":0.0009749451,"about_ca_topic_score_gemma":0.00021530384,"teacher_disagreement_score":0.856011,"about_ca_system_score_codex":0.00008718489,"about_ca_system_score_gemma":0.00020211306,"threshold_uncertainty_score":0.99976397},"labels":[],"label_agreement":null},{"id":"W4410230417","doi":"10.1016/j.actbio.2025.05.028","title":"Bacterial Extracellular Vesicles: Bridging Pathogen Biology and Therapeutic Innovation","year":2025,"lang":"en","type":"review","venue":"Acta Biomaterialia","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Bridging (networking); Extracellular vesicles; Nanotechnology; Materials science; Pathogen; Cell biology; Biology; Microbiology; Computer science","score_opus":0.03311372404996206,"score_gpt":0.310041375156713,"score_spread":0.27692765110675094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410230417","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031593315,0.9554188,0.000025440899,0.000036727488,0.011423654,0.0006211243,0.0006807515,0.00015745641,0.000042727435],"genre_scores_gemma":[0.00556082,0.9881669,0.000023288778,0.000020594804,0.0005292056,0.00012344657,0.0045779226,0.000049152008,0.0009486298],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976405,0.00051365193,0.0008761268,0.0005681367,0.0000107798405,0.0003908385],"domain_scores_gemma":[0.9989359,0.00009409421,0.0004672203,0.00041335178,0.00007347852,0.000016006548],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031987383,0.0005142647,0.0013533122,0.0005131036,0.00023746211,0.0001304321,0.00024446906,0.0010470799,0.0008489891],"category_scores_gemma":[0.000056065823,0.00041117982,0.00015436155,0.0004862741,0.00013330406,0.00007840231,0.0002042184,0.00015461547,0.00013798915],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021162014,0.000031743948,0.000004523407,0.0018796755,0.00027284792,7.703728e-7,0.000017018367,4.9311233e-10,0.61523193,0.0010000727,0.0005005148,0.38103977],"study_design_scores_gemma":[0.00042661844,0.000085255975,0.000027306083,0.0018090903,0.0005581459,0.000103859216,0.0000045167126,5.1400388e-8,0.0053274273,0.0001089584,0.99115413,0.00039462541],"about_ca_topic_score_codex":0.000086660955,"about_ca_topic_score_gemma":0.0000031069078,"teacher_disagreement_score":0.99065363,"about_ca_system_score_codex":0.000046229554,"about_ca_system_score_gemma":0.00016112917,"threshold_uncertainty_score":0.999834},"labels":[],"label_agreement":null},{"id":"W4410326269","doi":"10.1177/08850666251337684","title":"Lumbar Puncture and Brain Herniation in Acute Bacterial Meningitis: An Updated Narrative Review","year":2025,"lang":"en","type":"review","venue":"Journal of Intensive Care Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Lumbar puncture; Brain herniation; Narrative review; Lumbar disc herniation; Meningitis; Randomized controlled trial; Intensive care medicine; Observational study; Psychological intervention; Anesthesia; Lumbar; Surgery; Internal medicine; Cerebrospinal fluid; Psychiatry","score_opus":0.017034888009269566,"score_gpt":0.33962665296913774,"score_spread":0.3225917649598682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410326269","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022988261,0.99022424,0.000005410226,0.0024576366,0.0043101255,0.00057206856,0.00007579601,0.000010729138,0.0000451561],"genre_scores_gemma":[0.00012640617,0.99612683,0.000008398054,0.0014741888,0.0004803091,0.000014747823,0.0014693456,0.000019328374,0.0002804308],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974823,0.0007536865,0.0012732773,0.00025903308,0.000036617414,0.00019505911],"domain_scores_gemma":[0.99443,0.0001580392,0.001188793,0.00019033795,0.0039883354,0.00004447913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044103217,0.0004037025,0.002908881,0.00049894454,0.00007779592,0.000013889774,0.00018521628,0.0005027741,0.00069382275],"category_scores_gemma":[0.0020685634,0.00024242736,0.00023236558,0.00034669606,0.00011910411,0.00015503408,0.000060865386,0.0009593356,0.0000051662846],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020503256,0.000036952468,0.000016303049,0.014417508,0.002029096,0.00013784935,0.0044748,8.4662645e-8,0.004698077,0.000022478664,0.35632652,0.6176353],"study_design_scores_gemma":[0.0012864205,0.0009972044,0.00006769275,0.11163426,0.0021295226,0.002159281,0.0029807063,2.5902434e-8,0.000018749572,0.000007074912,0.8785332,0.00018590364],"about_ca_topic_score_codex":0.000040321473,"about_ca_topic_score_gemma":0.00007334452,"teacher_disagreement_score":0.6174494,"about_ca_system_score_codex":0.00015120475,"about_ca_system_score_gemma":0.00032770343,"threshold_uncertainty_score":0.98859006},"labels":[],"label_agreement":null},{"id":"W4410343518","doi":"10.1016/j.vaccine.2025.127131","title":"Clinical and regulatory development strategies for GBS vaccines intended for maternal immunisation in low- and middle-income countries","year":2025,"lang":"en","type":"article","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"European Medicines Agency; World Health Organization; Bill and Melinda Gates Foundation","keywords":"Low and middle income countries; Medicine; Pregnancy; Environmental health; Immunology; Developing country; Economic growth; Biology; Economics; Genetics","score_opus":0.018799657563688264,"score_gpt":0.2945019757663339,"score_spread":0.2757023182026456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410343518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99584335,0.0015021656,0.0007226639,0.00045613793,0.00089466997,0.0005053011,0.00001764142,0.000036353307,0.000021702142],"genre_scores_gemma":[0.9981153,0.00024706422,0.0006335405,0.00006904174,0.000047180445,0.00008912115,0.000049713406,0.000009349062,0.0007396791],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904233,0.000047031423,0.0004954984,0.00022429037,0.0000068180975,0.00018400277],"domain_scores_gemma":[0.9994471,0.00022297344,0.00008933857,0.000121196455,0.000107259795,0.000012128897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003947811,0.00013985389,0.00030615935,0.00016307231,0.00016778275,0.00004632361,0.00006648966,0.00018617127,0.00003480138],"category_scores_gemma":[0.0000598777,0.000117188654,0.000034425506,0.0000639538,0.000023749692,0.00013893837,0.000064266664,0.00008606445,0.0000024780122],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0045687133,0.00020044603,0.9083224,0.0017597352,0.00054377754,6.049871e-7,0.00063056155,0.0000040839195,0.031077797,0.03788372,0.00079834065,0.014209809],"study_design_scores_gemma":[0.0054691536,0.00017388121,0.9607587,0.00044766118,0.000038471037,0.000011833193,0.0003097598,0.000023268854,0.0111296,0.0028670153,0.018617095,0.000153579],"about_ca_topic_score_codex":0.00007340411,"about_ca_topic_score_gemma":0.00034737028,"teacher_disagreement_score":0.052436274,"about_ca_system_score_codex":0.000020083227,"about_ca_system_score_gemma":0.000093107104,"threshold_uncertainty_score":0.4778815},"labels":[],"label_agreement":null},{"id":"W4410522616","doi":"10.1186/s12889-025-21953-8","title":"Understanding the value of meningococcal vaccination for adolescents and young adults in the United States: insights from a steady-state modelling approach","year":2025,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); St. Thomas University; York University","funders":"Sanofi","keywords":"Medicine; Vaccination; Herd immunity; Meningococcal vaccine; Meningococcal disease; Immunization; Population; Biostatistics; Pediatrics; Public health; Cost effectiveness; Vaccine efficacy; Neisseria meningitidis; Demography; Incidence (geometry); Epidemiology; Environmental health; Immunology; Internal medicine","score_opus":0.0814237833201131,"score_gpt":0.2958239449880141,"score_spread":0.21440016166790102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410522616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68932116,0.0003128187,0.30877227,0.0006228045,0.00021037442,0.00065946573,0.000035256275,0.00001568016,0.000050146784],"genre_scores_gemma":[0.99900645,0.0001613287,0.00017950952,0.00019401002,0.000014763315,0.000066006185,0.00034546558,0.000006532328,0.000025920614],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9986522,0.00055358454,0.00035140253,0.00019030755,0.000019373112,0.00023311187],"domain_scores_gemma":[0.99933594,0.000273926,0.00014521054,0.00016169185,0.00006814097,0.0000151087315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071862625,0.000103046776,0.00018713459,0.00023516978,0.0003181718,0.000045361165,0.00013843956,0.00008798957,0.0000024269543],"category_scores_gemma":[0.000052681375,0.000062283536,0.00003151952,0.00041678292,0.000033429293,0.00010246553,0.00003730897,0.00017619946,3.9673978e-7],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042499313,0.0041721296,0.21349049,0.004079003,0.0009074753,5.069023e-7,0.27755484,0.034964614,0.003915009,0.43989825,0.004352699,0.012415071],"study_design_scores_gemma":[0.019995023,0.00078546366,0.25461584,0.0010675923,0.000094531235,0.000016896674,0.095198855,0.5806987,0.00025324756,0.032443028,0.0142067205,0.0006240721],"about_ca_topic_score_codex":0.0044926372,"about_ca_topic_score_gemma":0.0009364268,"teacher_disagreement_score":0.5457341,"about_ca_system_score_codex":0.00011372343,"about_ca_system_score_gemma":0.00016756504,"threshold_uncertainty_score":0.6791554},"labels":[],"label_agreement":null},{"id":"W4410585583","doi":"10.3389/fimmu.2025.1569151","title":"Avidity of pertussis toxin antibodies following vaccination with genetically versus chemically detoxified pertussis toxin-containing vaccines during pregnancy","year":2025,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Health Authority; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Faculty of Medicine Siriraj Hospital, Mahidol University; Chulalongkorn University; Mahidol University; Bill and Melinda Gates Foundation","keywords":"Pertussis toxin; Avidity; Toxin; Vaccination; Antibody; Medicine; Bordetella pertussis; Virology; Pregnancy; Whooping cough; Microbiology; Immunology; Biology; Receptor; Bacteria; Genetics; Internal medicine","score_opus":0.008980781736117344,"score_gpt":0.23942855098667418,"score_spread":0.23044776925055682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410585583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98126584,0.011367197,0.0013860244,0.00032316102,0.0042195474,0.00036338362,0.000010915069,0.00009684876,0.0009670593],"genre_scores_gemma":[0.9960407,0.000979098,0.0020114009,0.000017022197,0.000027115966,0.00008368265,0.000053385942,0.000026273092,0.000761347],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99797946,0.0002277648,0.00066698407,0.00052757986,0.000032138556,0.000566097],"domain_scores_gemma":[0.99898016,0.0001898593,0.00021989395,0.0004479481,0.00014318232,0.00001895376],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00014401105,0.00034154695,0.00079362816,0.0005746408,0.00026554565,0.000024084886,0.00035493533,0.0005303099,0.00016542734],"category_scores_gemma":[0.00032000543,0.00029951512,0.0001851697,0.0005165326,0.00011576853,0.0002038742,0.00019327692,0.00040852706,0.00000661488],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036224267,0.00024659725,0.1614329,0.000096465636,0.0013771115,0.0000086913,0.00052852643,0.000012235559,0.8154685,0.00031830824,0.00025442292,0.01663384],"study_design_scores_gemma":[0.011270562,0.0007205322,0.57909447,0.00064500084,0.0003061089,0.000034562763,0.0016676995,0.000026515398,0.4043696,0.00021919172,0.001134615,0.00051113544],"about_ca_topic_score_codex":0.00018384375,"about_ca_topic_score_gemma":0.00020250153,"teacher_disagreement_score":0.41766158,"about_ca_system_score_codex":0.00017143683,"about_ca_system_score_gemma":0.00013365339,"threshold_uncertainty_score":0.9999457},"labels":[],"label_agreement":null},{"id":"W4410738264","doi":"10.1186/s12974-025-03467-7","title":"Effects of M. tuberculosis and HIV-1 infection on in vitro blood-brain barrier function","year":2025,"lang":"en","type":"article","venue":"Journal of Neuroinflammation","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Centre Hospitalier Universitaire de Québec; Francis Crick Institute; Wellcome Trust; Université Laval","keywords":"Mycobacterium tuberculosis; Blood–brain barrier; Tuberculosis; Immunology; Biology; Microglia; Microbiology; Flow cytometry; Glutamate receptor; Inflammation; Medicine; Central nervous system; Pathology; Biochemistry","score_opus":0.004043025949715825,"score_gpt":0.21562928343758486,"score_spread":0.21158625748786905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410738264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787855,0.00016161136,0.00012972644,0.000533032,0.0010321535,0.00012258258,0.0000014588154,0.000008160118,0.00013273647],"genre_scores_gemma":[0.99964094,0.00011181536,0.000010371929,0.000025952735,0.000047109468,0.0000031985428,0.000004345568,0.0000045867228,0.00015165411],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992521,0.0001895124,0.00038143017,0.00008141977,0.000016819717,0.00007874795],"domain_scores_gemma":[0.99933094,0.00026679906,0.00024516517,0.00006283041,0.00008490989,0.000009338658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021392509,0.00008239798,0.00019312254,0.0004645616,0.000048947626,0.000011512294,0.000028322747,0.00010993045,0.000019098827],"category_scores_gemma":[0.00029450443,0.00007054867,0.00006280789,0.00018432521,0.000022331802,0.00017839317,0.000013969005,0.00019674686,0.0000049193427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005669096,0.0000985687,0.0025888616,0.000077117045,0.000069832735,0.0000013515933,0.000047914302,0.000040851355,0.98948514,0.0002746955,0.0002623619,0.006486391],"study_design_scores_gemma":[0.0015209863,0.00035949913,0.26726398,0.00009973895,0.00008793293,0.000041226824,0.0000065811696,0.000011259886,0.7291234,0.00018592986,0.0012596564,0.00003981004],"about_ca_topic_score_codex":0.000018078972,"about_ca_topic_score_gemma":0.000006793501,"teacher_disagreement_score":0.2646751,"about_ca_system_score_codex":0.000018052373,"about_ca_system_score_gemma":0.000022884818,"threshold_uncertainty_score":0.28768912},"labels":[],"label_agreement":null},{"id":"W4411057569","doi":"10.1097/wco.0000000000001395","title":"Novel techniques for the diagnosis of neurological infections","year":2025,"lang":"en","type":"review","venue":"Current Opinion in Neurology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Cancer Research UK; Wellcome Trust","keywords":"Medicine; Metagenomics; Encephalitis; Intensive care medicine; Multiplex; Bioinformatics; Biology; Immunology","score_opus":0.10790671211457868,"score_gpt":0.3961653723793095,"score_spread":0.2882586602647308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411057569","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000023919547,0.97517294,0.0004859365,0.00028541518,0.021966448,0.0016702398,0.00030001905,0.000067711946,0.00002736897],"genre_scores_gemma":[0.000033680506,0.9958308,0.000009016452,0.000028202514,0.00025530977,0.0035616423,0.00023933026,0.00001730641,0.000024737024],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998173,0.00036427655,0.0007464208,0.00042343058,0.000010709947,0.0002821803],"domain_scores_gemma":[0.9957636,0.003421432,0.000348048,0.0003842281,0.000072918454,0.000009792593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023807824,0.00030619427,0.0011048504,0.0004156653,0.00013600058,0.0000088031275,0.00037476368,0.0006854512,0.000098717814],"category_scores_gemma":[0.00046110546,0.00019813205,0.00047594725,0.00042219312,0.00018344475,0.000029287065,0.0002179339,0.0008392907,0.000011041997],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003958197,0.00062160654,0.0005830967,0.0058005545,0.00008915842,3.676634e-8,0.0000063176763,0.0000010092572,0.00001036162,0.0026615043,0.01029023,0.97989655],"study_design_scores_gemma":[0.000287276,0.000570771,0.00022071689,0.0012200463,0.000177723,0.000050571023,4.3329834e-7,9.0901034e-7,0.000006822566,0.0000687692,0.99726355,0.00013239277],"about_ca_topic_score_codex":0.000024065219,"about_ca_topic_score_gemma":0.000009323593,"teacher_disagreement_score":0.98697335,"about_ca_system_score_codex":0.000009565895,"about_ca_system_score_gemma":0.00012597644,"threshold_uncertainty_score":0.8079591},"labels":[],"label_agreement":null},{"id":"W4411165952","doi":"10.33321/cdi.2017.41.37","title":"Paediatric Active Enhanced Disease Surveillance (PAEDS) annual report 2015: Prospective hospital-based surveillance for serious paediatric conditions","year":2017,"lang":"en","type":"article","venue":"Communicable Diseases Intelligence","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child, Adolescent and Family Mental Health","funders":"Marie Bashir Institute, University of Sydney; Sydney Medical School; National Health and Medical Research Council; Department of Health and Aged Care, Australian Government; Australian Government","keywords":"Medicine; Disease surveillance; Pediatrics; Disease monitoring; Prospective cohort study; Disease; Emergency medicine; Medical emergency; Surgery; Internal medicine","score_opus":0.011994962602899758,"score_gpt":0.29906107267385396,"score_spread":0.2870661100709542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411165952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9292809,0.022085642,0.011298944,0.0024428326,0.007767425,0.005199258,0.019857133,0.0008162908,0.0012516007],"genre_scores_gemma":[0.9943226,0.0013027659,0.00012148306,0.00006254906,0.00023250293,0.0011069608,0.0019281988,0.00005772319,0.0008651986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974165,0.00035156938,0.000662143,0.0007793852,0.000067458204,0.00072295306],"domain_scores_gemma":[0.99400145,0.0010725966,0.0008451372,0.0029006223,0.0009865954,0.00019361173],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.000360095,0.00047246317,0.00068003713,0.00017320842,0.0024479164,0.00019025807,0.0014928906,0.00023735836,0.00045101764],"category_scores_gemma":[0.003139387,0.00046072959,0.00042646672,0.0002756206,0.0007169298,0.00057157356,0.0005023734,0.00039360666,0.00018557927],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062998175,0.0072142533,0.8944786,0.0005622395,0.0015182298,0.000113509275,0.0007052784,0.0013341546,0.007961863,0.003340626,0.03691048,0.03956095],"study_design_scores_gemma":[0.0020402768,0.00075049925,0.9550635,0.00007907837,0.00025280926,0.000024128305,0.00043815904,0.0001915877,0.008877518,0.0029379984,0.028020632,0.0013238194],"about_ca_topic_score_codex":0.00033069254,"about_ca_topic_score_gemma":0.00023763305,"teacher_disagreement_score":0.06504174,"about_ca_system_score_codex":0.00015512212,"about_ca_system_score_gemma":0.00045938848,"threshold_uncertainty_score":0.99978447},"labels":[],"label_agreement":null},{"id":"W4411374575","doi":"10.1128/msystems.01717-24","title":"<i>Bordetella pertussis</i> exhibits genomic diversity within patients and laboratory culture","year":2025,"lang":"en","type":"article","venue":"mSystems","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Response Biomedical (Canada)","funders":"","keywords":"Bordetella pertussis; Biology; Gene duplication; Whooping cough; Genetics; Genome; Copy-number variation; Whole genome sequencing; Gene; Insertion sequence; Virology; Bacteria; Transposable element","score_opus":0.00527356735670433,"score_gpt":0.198847951458853,"score_spread":0.19357438410214867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411374575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99364287,0.0021291291,0.000006362875,0.000049675993,0.002408351,0.00017215034,0.000079630416,0.00005520062,0.0014566557],"genre_scores_gemma":[0.9956061,0.0000479496,0.000005143265,0.00014229683,0.000031608997,0.0000066840835,0.000042323572,0.000004766633,0.0041130846],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994215,0.000101683916,0.00015241589,0.00018710575,0.000008951926,0.00012836272],"domain_scores_gemma":[0.9997005,0.000019113519,0.000060216305,0.00012556207,0.00008093252,0.00001370452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098825854,0.000107126805,0.0001704663,0.00005452023,0.00040436117,0.00002539695,0.00008675524,0.00017846949,0.00004354347],"category_scores_gemma":[0.000020465182,0.00008522663,0.000028944654,0.000110648034,0.000040828196,0.000049002345,0.0002027905,0.00011092353,0.00007087843],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008826559,0.0001254369,0.3985353,0.00009949086,0.00024415817,5.932737e-7,0.0014426371,0.0000012191057,0.56122077,0.00081717665,0.036645625,0.0007793078],"study_design_scores_gemma":[0.0031707333,0.0002010314,0.26640034,0.00013557976,0.00014475906,0.000009298585,0.00065234303,0.0000031251864,0.038151123,0.000047100777,0.69071543,0.00036915095],"about_ca_topic_score_codex":0.00021998699,"about_ca_topic_score_gemma":0.000071588045,"teacher_disagreement_score":0.6540698,"about_ca_system_score_codex":0.000025529389,"about_ca_system_score_gemma":0.000022512471,"threshold_uncertainty_score":0.3475441},"labels":[],"label_agreement":null},{"id":"W4411441457","doi":"10.1007/s10143-025-03669-w","title":"The role of neuroendoscopy in treatment of pediatric brain abscesses: case series and systematic review of the literature","year":2025,"lang":"en","type":"review","venue":"Neurosurgical Review","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surgical Specialties (Canada)","funders":"","keywords":"Medicine; Neurosurgery; Brain abscess; General surgery; Medical physics; Surgery; Abscess","score_opus":0.012113104416188434,"score_gpt":0.2986003379004065,"score_spread":0.28648723348421806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411441457","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008667746,0.99613535,2.6894893e-8,0.00017472135,0.00035892037,0.003020262,0.0001613099,0.0000059241947,0.00005679595],"genre_scores_gemma":[0.000034489436,0.99915206,7.4507545e-7,0.000058015088,0.000017061633,0.00030347396,0.00002214799,0.000012789063,0.00039919687],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99550235,0.002283864,0.0017515703,0.00026785542,0.000031412033,0.0001629193],"domain_scores_gemma":[0.99599385,0.0020090786,0.001182048,0.00069240935,0.000107625885,0.000014998206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040126877,0.00034657685,0.0035762293,0.00008271292,0.000076254044,0.000011137129,0.00026735428,0.00016572325,0.000032503976],"category_scores_gemma":[0.0012921201,0.00014487913,0.0007179277,0.0009811672,0.00011572583,0.000036155492,0.00011356941,0.00025279686,0.0000025890615],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059880695,0.00008308164,0.000007910015,0.9726662,0.00007101826,0.00001529534,0.0000069053235,3.965592e-9,0.0000075077855,0.00023005328,0.00014171605,0.026764307],"study_design_scores_gemma":[0.00009044339,0.00013036924,0.0000013778732,0.5230544,0.001787568,0.0016533653,0.0000014116919,5.5436193e-9,0.000007882666,0.0000051230695,0.4732123,0.0000556883],"about_ca_topic_score_codex":0.00001556234,"about_ca_topic_score_gemma":0.000009454581,"teacher_disagreement_score":0.4730706,"about_ca_system_score_codex":0.000015848706,"about_ca_system_score_gemma":0.0001518366,"threshold_uncertainty_score":0.5907999},"labels":[],"label_agreement":null},{"id":"W4411968289","doi":"10.1016/j.ajem.2025.06.069","title":"Thunderclap headache in a patient with Salmonella Enterica meningitis","year":2025,"lang":"en","type":"article","venue":"The American Journal of Emergency Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Ontario Tobacco Research Unit","funders":"","keywords":"Salmonella enterica; Medicine; Meningitis; Salmonella; Pediatrics; Biology; Bacteria","score_opus":0.016992211321004508,"score_gpt":0.29285763261736075,"score_spread":0.2758654212963563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411968289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880193,0.0019172201,0.00031209388,0.006011779,0.0016533077,0.00008480719,0.0000016189034,0.0000073972283,0.0019924766],"genre_scores_gemma":[0.99823517,0.0009247188,0.000028153614,0.00015537716,0.00008570077,0.000004750123,0.0000018770378,0.0000068733525,0.00055739767],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99888945,0.00023254196,0.0005656731,0.0000979057,0.00002878865,0.0001856697],"domain_scores_gemma":[0.99913174,0.00010462175,0.0004533673,0.0001694578,0.00012239427,0.000018436886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031580823,0.00012021048,0.0004065783,0.00020141322,0.00008355271,0.0000018345202,0.00018279043,0.000024191557,0.0008348494],"category_scores_gemma":[0.00007623211,0.000060326984,0.00006060685,0.0006150304,0.00022461431,0.000041019717,0.000031509502,0.0002815904,0.0000062309664],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004948634,0.0006544443,0.06382069,0.000033159056,0.0014475856,0.000045449204,0.007162971,0.000089069144,0.75637835,0.00075328385,0.08405642,0.080609955],"study_design_scores_gemma":[0.012593831,0.041344408,0.3750204,0.002668552,0.0012651108,0.004303454,0.060550626,0.000020972928,0.027719563,0.0025461973,0.47093993,0.0010269326],"about_ca_topic_score_codex":0.00092433597,"about_ca_topic_score_gemma":0.0001189831,"teacher_disagreement_score":0.7286588,"about_ca_system_score_codex":0.00003228512,"about_ca_system_score_gemma":0.000052224004,"threshold_uncertainty_score":0.91410154},"labels":[],"label_agreement":null},{"id":"W4412085155","doi":"10.1016/j.imlet.2025.107059","title":"The CSF transcriptome in adults with pneumococcal meningitis reveals compartmentalised host inflammatory responses associated with mortality","year":2025,"lang":"en","type":"article","venue":"Immunology Letters","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; University College London Hospitals NHS Foundation Trust; Wellcome Trust; Academy of Medical Sciences; National Institute for Health and Care Research; Cancer Research UK; University College London; Imperial College London; International Seafood Sustainability Foundation","keywords":"Transcriptome; Meningitis; Immunology; Host (biology); Medicine; Streptococcus pneumoniae; Biology; Microbiology; Pediatrics; Gene; Genetics; Gene expression; Antibiotics","score_opus":0.008160407534721147,"score_gpt":0.23580930096254732,"score_spread":0.22764889342782618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412085155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941145,0.0006564378,0.00000946193,0.003654652,0.0006481693,0.0005206089,0.000056668836,0.00011783814,0.00022167113],"genre_scores_gemma":[0.9988512,0.000060589646,0.000005060132,0.0003460432,0.000010986365,0.00019457021,0.000110960806,0.000016644306,0.00040394047],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979859,0.0007375691,0.00041664482,0.00033481588,0.000024206001,0.00050088647],"domain_scores_gemma":[0.9989292,0.00044884722,0.0001585167,0.00038101603,0.000069806265,0.000012592818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036122583,0.00025880852,0.00039255832,0.00019212153,0.00045749053,0.000040428582,0.0002623643,0.00022366541,0.00004560007],"category_scores_gemma":[0.00007014726,0.0001709925,0.00006532635,0.0003479085,0.0007138805,0.00014012489,0.000044411325,0.00046989854,0.000020058502],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026271294,0.00010694325,0.21293755,0.000008450411,0.0008789414,0.000017514247,0.00029422724,0.000002302479,0.7821705,0.00032194945,0.00055184565,0.000082676794],"study_design_scores_gemma":[0.004766448,0.00026834765,0.9628463,0.00027162582,0.00007738552,0.000045742403,0.00031669808,6.0973656e-7,0.02819675,0.00001858024,0.0029761328,0.00021538377],"about_ca_topic_score_codex":0.0002804329,"about_ca_topic_score_gemma":0.00151,"teacher_disagreement_score":0.7539737,"about_ca_system_score_codex":0.0001308349,"about_ca_system_score_gemma":0.000073447576,"threshold_uncertainty_score":0.69728714},"labels":[],"label_agreement":null},{"id":"W4412102505","doi":"10.1007/s40121-025-01181-8","title":"Long-Term Impacts of Invasive Meningococcal Disease on Survivors and Their Caregivers in the United States and Canada","year":2025,"lang":"en","type":"review","venue":"Infectious Diseases and Therapy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Canadian Sleep Society","funders":"Sanofi","keywords":"Medicine; Meningococcal disease; Term (time); Disease; Gerontology; Intensive care medicine; Pediatrics; Internal medicine; Neisseria meningitidis","score_opus":0.012561024889217943,"score_gpt":0.26351562183703464,"score_spread":0.2509545969478167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412102505","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47904083,0.5199683,1.9356929e-7,0.000019965497,0.0001546659,0.00035391172,0.0004446301,0.000008823523,0.000008715407],"genre_scores_gemma":[0.24189551,0.7575348,2.421928e-8,0.00006899575,0.000017208065,0.000051868574,0.00040682778,0.0000105337085,0.000014225183],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.998857,0.0004150324,0.00024747083,0.00026786726,0.000016332722,0.00019624628],"domain_scores_gemma":[0.99871653,0.0008346259,0.00015614467,0.00019591479,0.00004250929,0.00005429882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007276275,0.00033089964,0.0006934251,0.00024006696,0.00017019696,0.000041268977,0.00008928713,0.00011440785,0.000025676476],"category_scores_gemma":[0.0000495613,0.00018894904,0.00009853898,0.00020955606,0.00015154672,0.00003768896,0.000045365585,0.00019438201,2.7724923e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059848855,0.00077021186,0.32229838,0.012941228,0.002541662,0.00004644367,0.0012647958,0.0000048763263,0.0000544775,0.0005126571,0.00082343636,0.65814334],"study_design_scores_gemma":[0.0067188675,0.001756798,0.39289075,0.016126553,0.0016259502,0.00020627907,0.0010920587,0.000001069926,0.00004472792,0.00042116677,0.57754666,0.0015690958],"about_ca_topic_score_codex":0.32593963,"about_ca_topic_score_gemma":0.2327125,"teacher_disagreement_score":0.65657425,"about_ca_system_score_codex":0.000038831935,"about_ca_system_score_gemma":0.0003976668,"threshold_uncertainty_score":0.7812885},"labels":[],"label_agreement":null},{"id":"W4412166774","doi":"10.1017/cjn.2025.10275","title":"P.122 Radiologico-pathologic heterogeneity and complexity of polymicrobial brain abscesses","year":2025,"lang":"en","type":"article","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Pathology","score_opus":0.043717068053683805,"score_gpt":0.2822747704290074,"score_spread":0.2385577023753236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412166774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883912,0.0040014745,0.00003547886,0.004653335,0.001774121,0.00012474063,0.000032175107,0.000016471595,0.0009709973],"genre_scores_gemma":[0.99742484,0.00041561303,0.00043960294,0.001597199,0.00007707786,0.0000015406646,8.007841e-7,0.0000047347958,0.000038612143],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996377,0.0013077862,0.0008968857,0.00044542996,0.00007839991,0.0008945259],"domain_scores_gemma":[0.9977762,0.0006977925,0.00071783294,0.00013880196,0.00034783426,0.00032150318],"candidate_categories":["sts"],"consensus_categories":["sts"],"category_scores_codex":[0.00297328,0.00028999013,0.0006589324,0.0009106235,0.0022950557,0.0002459779,0.0012667911,0.00031095772,0.00018178362],"category_scores_gemma":[0.0019567169,0.00019059285,0.00020758231,0.0009510003,0.013266701,0.00046534574,0.0001186528,0.0008595178,0.0000021982955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019613378,0.00010580517,0.9653965,0.000019474135,0.000058395108,0.0004237192,0.00016105786,0.00016444917,0.02156862,0.0060766516,0.0021316402,0.003697553],"study_design_scores_gemma":[0.0019323564,0.06307708,0.8102966,0.000117617856,0.00012973807,0.05124117,0.00035722088,0.000058332538,0.014336382,0.04351493,0.01430852,0.0006300793],"about_ca_topic_score_codex":0.001990596,"about_ca_topic_score_gemma":0.0402044,"teacher_disagreement_score":0.15509993,"about_ca_system_score_codex":0.00007933055,"about_ca_system_score_gemma":0.0014703132,"threshold_uncertainty_score":0.9990038},"labels":[],"label_agreement":null},{"id":"W4412435259","doi":"10.1101/2025.07.14.25331510","title":"Pharmacokinetics of dexamethasone in tuberculosis meningitis","year":2025,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases; National Institute of Mental Health; National Institutes of Health; University of Cape Town; Imperial College London; Imperial College Healthcare NHS Trust; National Institute for Health and Care Research; Cancer Research UK; International Maternal Pediatric Adolescent AIDS Clinical Trials Network; Wellcome Trust; ACT Government; National Research Foundation; UK Research and Innovation; Francis Crick Institute; Bill and Melinda Gates Foundation","keywords":"Pharmacokinetics; Dexamethasone; Rifampicin; Medicine; Lopinavir; Regimen; Pharmacology; Ritonavir; Efavirenz; Tuberculosis; Internal medicine; Immunology; Human immunodeficiency virus (HIV); Coronavirus disease 2019 (COVID-19); Antiretroviral therapy; Viral load","score_opus":0.02089224829045805,"score_gpt":0.2909698888597874,"score_spread":0.27007764056932937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412435259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914585,0.0027517437,0.00006872042,0.00020027172,0.0029636968,0.00021547571,0.00015697484,0.000040713043,0.0021439001],"genre_scores_gemma":[0.9972239,0.0010285208,0.00017690653,0.000017812894,0.000041886822,0.000052634983,0.0001058275,0.00001013001,0.0013423555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998866,0.00019975207,0.00043144796,0.00029425457,0.000011819178,0.00019667759],"domain_scores_gemma":[0.9993,0.00013865725,0.0001477838,0.00032237364,0.000081194004,0.000009972325],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024615668,0.00019281537,0.00047774878,0.00030405866,0.000028745171,0.0000074670443,0.00022394331,0.00044147216,0.0010165496],"category_scores_gemma":[0.0000898394,0.00018663403,0.0001270376,0.00020026162,0.00006329441,0.000019121502,0.0004076421,0.0005439468,0.000028578745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007293508,0.00024810396,0.15148667,0.00029003448,0.0004073746,0.000002010201,0.00027331105,0.000117763084,0.83706206,0.00027974497,0.0013244875,0.008435517],"study_design_scores_gemma":[0.0015309951,0.0000798144,0.13786349,0.0005327006,0.00024765736,0.000013841997,0.0000351541,0.000025378777,0.8217607,0.0005553032,0.03698472,0.0003702562],"about_ca_topic_score_codex":0.00079323846,"about_ca_topic_score_gemma":0.000102927595,"teacher_disagreement_score":0.03566023,"about_ca_system_score_codex":0.000028517628,"about_ca_system_score_gemma":0.00006506481,"threshold_uncertainty_score":0.99989665},"labels":[],"label_agreement":null},{"id":"W4412520814","doi":"10.1007/s43678-025-00949-8","title":"Just the Facts: Diagnosis and management of pertussis in the emergency department","year":2025,"lang":"en","type":"article","venue":"Canadian Journal of Emergency Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Medicine; Emergency department; Medical emergency; Emergency medicine; Nursing","score_opus":0.05740032747226043,"score_gpt":0.3239688388017849,"score_spread":0.26656851132952447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412520814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9445387,0.028779984,0.00001379482,0.015598391,0.007911422,0.00021792676,0.000012048363,0.0000014736123,0.002926219],"genre_scores_gemma":[0.9781317,0.02087309,0.0000028369961,0.00009065212,0.00007901691,0.00001784405,0.000004607473,0.0000033935921,0.0007968692],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990295,0.00013092054,0.00056875683,0.000077249555,0.000020782018,0.00017276319],"domain_scores_gemma":[0.9995059,0.000050030332,0.00016368114,0.00015419474,0.00009045249,0.000035745088],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00050641556,0.00009386807,0.0002033755,0.00020337428,0.00015693001,0.0000018779092,0.00022090241,0.000053201282,0.0037166048],"category_scores_gemma":[0.000085216,0.000046645047,0.000059259302,0.00034758024,0.00008268742,0.000039451876,0.000013485234,0.0001560972,0.0000028295851],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005610739,0.000113704074,0.5223547,0.00018261869,0.0008858563,0.000018282588,0.0035850094,0.0000042670013,0.0018246423,0.007287981,0.44265825,0.021028558],"study_design_scores_gemma":[0.00053464423,0.00018665443,0.573622,0.00020278025,0.00022546877,0.000013224202,0.0033875455,3.5335063e-7,0.000117062715,0.00027262556,0.42138425,0.000053400643],"about_ca_topic_score_codex":0.0057951217,"about_ca_topic_score_gemma":0.025280748,"teacher_disagreement_score":0.051267263,"about_ca_system_score_codex":0.00002726901,"about_ca_system_score_gemma":0.000074465504,"threshold_uncertainty_score":0.9971941},"labels":[],"label_agreement":null},{"id":"W4412529796","doi":"10.1016/j.jinf.2025.106558","title":"Umrah- and travel-associated meningococcal disease due to multiple serogroup W ST-11 sub-strains pre-Hajj 2024","year":2025,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Hajj; Meningococcal disease; Medicine; Virology; Neisseria meningitidis; Geography; Biology; Genetics; Bacteria","score_opus":0.008818935387783455,"score_gpt":0.25488878540699833,"score_spread":0.2460698500192149,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412529796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943132,0.0002264885,0.0018955318,0.00046659022,0.0027710123,0.00018515988,0.000040346735,0.000027134585,0.00007455554],"genre_scores_gemma":[0.9987963,0.00008045926,0.000022825152,0.00007423849,0.00011892485,0.000010237937,0.000021392603,0.000009024302,0.0008666019],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991196,0.0001479034,0.00038586193,0.00013926119,0.000019539737,0.00018786587],"domain_scores_gemma":[0.9993842,0.00008724006,0.00019259517,0.00008732633,0.00018813323,0.000060506565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003148859,0.00013740872,0.00027338503,0.00029303328,0.00020294548,0.00004739355,0.00004816784,0.00016931139,0.000126564],"category_scores_gemma":[0.00033779378,0.00011677962,0.00012522191,0.00026731007,0.000034340588,0.00017400613,0.000038905066,0.00027508778,0.00001367134],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005610289,0.00053458195,0.3474626,0.00003832905,0.0004470724,0.000008787484,0.00024731943,0.00007082682,0.63181037,0.00019741803,0.010557911,0.008063752],"study_design_scores_gemma":[0.0017041009,0.0003816549,0.96838146,0.00011835253,0.00015515467,0.00011143317,0.000037858892,0.000017014994,0.0123566715,0.00011244929,0.01650334,0.00012051923],"about_ca_topic_score_codex":0.00020809527,"about_ca_topic_score_gemma":0.0006256746,"teacher_disagreement_score":0.62091887,"about_ca_system_score_codex":0.00009178817,"about_ca_system_score_gemma":0.00007014679,"threshold_uncertainty_score":0.47621349},"labels":[],"label_agreement":null},{"id":"W4412652536","doi":"10.1007/978-3-031-78916-8_10","title":"Imaging of Brain Infections","year":2025,"lang":"en","type":"book-chapter","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Neuroimaging; Psychiatry","score_opus":0.00982028453253935,"score_gpt":0.2415580045694108,"score_spread":0.23173772003687143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412652536","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022502929,0.0008378218,0.00021965246,0.0004435463,0.001787745,0.00011369927,0.000066610904,0.00008438672,0.9962215],"genre_scores_gemma":[0.010503962,0.000097881864,0.000014964193,0.000097542186,0.000043518477,0.0000043725536,0.00012712287,0.000011797139,0.98909885],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994902,0.000013353438,0.00023969548,0.00015512202,0.000004355596,0.0000972993],"domain_scores_gemma":[0.99948585,0.00010854289,0.00010041418,0.00021108775,0.000088664914,0.000005458834],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000053685024,0.00014714905,0.0002652339,0.00022150685,0.000077628894,0.0000056916297,0.00006773666,0.00026220325,0.012688707],"category_scores_gemma":[0.000025377727,0.00013032233,0.00014585492,0.000022666705,0.00006922683,0.000029602492,0.00007050064,0.0002116267,0.00031865723],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012714923,0.000043466902,0.00032258724,0.000042269345,0.00035105034,3.1875294e-7,0.0000138266205,2.6452616e-7,0.05426781,0.64267886,0.2881325,0.014134359],"study_design_scores_gemma":[0.00023331922,0.000034770546,0.00013258708,0.00008297109,0.00006703217,0.000023216382,0.000003441756,1.890264e-7,0.0033925995,0.0034482582,0.9924591,0.00012246842],"about_ca_topic_score_codex":0.00017797516,"about_ca_topic_score_gemma":0.00008669135,"teacher_disagreement_score":0.7043266,"about_ca_system_score_codex":0.000015714786,"about_ca_system_score_gemma":0.000058886842,"threshold_uncertainty_score":0.98821384},"labels":[],"label_agreement":null},{"id":"W4412980884","doi":"10.1016/j.cmicom.2025.105127","title":"Communicable episode 30: WHO’s first-ever guideline on meningitis","year":2025,"lang":"en","type":"article","venue":"CMI Communications","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Guideline; Medicine; Meningitis; Communicable disease; Environmental health; Virology; Pediatrics; Public health; Pathology","score_opus":0.02905591327294202,"score_gpt":0.3085638716239867,"score_spread":0.2795079583510447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412980884","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1919048,0.02429052,0.003000731,0.12518387,0.003795919,0.001652535,0.00041473302,0.0013032644,0.64845365],"genre_scores_gemma":[0.9707641,0.0018976583,0.0013189567,0.0010184521,0.000025065656,0.00016488055,0.0006067972,0.000020169085,0.024183897],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988605,0.00027153746,0.00043561513,0.00017948954,0.0000119913975,0.00024087299],"domain_scores_gemma":[0.9963062,0.00050070457,0.000099857316,0.0028635303,0.00021185147,0.000017895538],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026636876,0.000159684,0.0002692109,0.00015414142,0.0012654937,0.00004328907,0.0011529735,0.00020031189,0.0019031977],"category_scores_gemma":[0.00019472472,0.00015303976,0.000088371155,0.0003638648,0.00021991588,0.00008804767,0.000731244,0.00044079448,0.0010728575],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005551715,0.0007176439,0.0036442128,0.00001664291,0.0004229979,2.618686e-7,0.00029744642,0.00007148613,0.024342919,0.15921295,0.80019224,0.011025705],"study_design_scores_gemma":[0.00073644903,0.000056633253,0.0031971892,0.00009508694,0.00004809717,0.0000063941243,0.000080146354,0.00007871618,0.003584361,0.0009618733,0.9910098,0.00014526292],"about_ca_topic_score_codex":0.0011989042,"about_ca_topic_score_gemma":0.0011317075,"teacher_disagreement_score":0.7788593,"about_ca_system_score_codex":0.00006535988,"about_ca_system_score_gemma":0.00005357546,"threshold_uncertainty_score":0.9997049},"labels":[],"label_agreement":null},{"id":"W4413140606","doi":"10.1080/22221751.2025.2547732","title":"Evaluation of immune responses to Tdap booster during pregnancy in women who received whole cell or acellular pertussis vaccines during childhood","year":2025,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention","keywords":"Bordetella pertussis; Medicine; Whooping cough; Diphtheria; Immunology; Booster dose; Pertussis vaccine; Pregnancy; Antibody; Immune system; Pertactin; Tetanus; Pertussis toxin; Booster (rocketry); Immunization; Vaccination; Internal medicine; Biology","score_opus":0.011062386386120636,"score_gpt":0.26381396040064764,"score_spread":0.252751574014527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413140606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929816,0.0039124237,0.000029887096,0.0004737502,0.0011889652,0.00075704994,0.000033851004,0.00011041387,0.0005120369],"genre_scores_gemma":[0.98840606,0.00040399222,0.000030716663,0.000019584117,0.00003964171,0.0003509736,0.000024188541,0.000030294714,0.010694558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774003,0.00054486684,0.0007305358,0.0004484808,0.000043584732,0.0004924868],"domain_scores_gemma":[0.9988808,0.00011384243,0.00018474033,0.00046500936,0.0003265957,0.000028993922],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005408155,0.00028734072,0.00045782048,0.0010456382,0.0005386995,0.000039218245,0.000182424,0.00022049552,0.0012831322],"category_scores_gemma":[0.00037308416,0.00026643983,0.00014683479,0.0010360107,0.00003827985,0.00024111342,0.00020640546,0.00029129555,0.000082609855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002985354,0.0005709095,0.011581389,0.00010804456,0.00021836058,9.2799e-7,0.003306886,0.00036046054,0.9811822,0.0000054902757,0.00018002946,0.002186766],"study_design_scores_gemma":[0.0033700815,0.00015773092,0.38005558,0.0011564792,0.00016280597,0.000032548447,0.0008322238,0.0000053684284,0.60890394,0.000031602845,0.005009072,0.000282582],"about_ca_topic_score_codex":0.00041476585,"about_ca_topic_score_gemma":0.00039425024,"teacher_disagreement_score":0.37227827,"about_ca_system_score_codex":0.00030262192,"about_ca_system_score_gemma":0.00018290771,"threshold_uncertainty_score":0.9999788},"labels":[],"label_agreement":null},{"id":"W4413435130","doi":"10.1097/mop.0000000000001486","title":"Resurgence of pertussis: whopping the ‘100-day cough’","year":2025,"lang":"en","type":"article","venue":"Current Opinion in Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child, Adolescent and Family Mental Health","funders":"","keywords":"Medicine; Whooping cough; Anesthesia; Virology","score_opus":0.04126375742014666,"score_gpt":0.33350274550603354,"score_spread":0.2922389880858869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413435130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7607977,0.118277535,0.0018899784,0.002227534,0.114440955,0.0006718505,0.000097732205,0.0001029369,0.0014938083],"genre_scores_gemma":[0.9848601,0.014378883,0.000008693216,0.000017446882,0.00034324714,0.0000378465,0.000053555632,0.000005885469,0.00029431342],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991594,0.0001539743,0.00034538543,0.00015825576,0.00001565127,0.00016735331],"domain_scores_gemma":[0.9992776,0.0003079951,0.00010993514,0.00021608762,0.00008128802,0.0000070977026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038907916,0.00009398622,0.00015825246,0.000202038,0.000115134266,0.000010593018,0.00017874803,0.00010821546,0.000097152755],"category_scores_gemma":[0.00025076207,0.000066773544,0.00006428068,0.0006378012,0.000059435522,0.000053661704,0.000091951966,0.00023595737,0.000029499613],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001625147,0.0008718496,0.5802634,0.0009544333,0.000093379625,1.3642664e-7,0.0015633258,0.00009179945,0.014376478,0.026937515,0.2821295,0.092555664],"study_design_scores_gemma":[0.00076032174,0.000041506817,0.13781425,0.00019460954,0.00003312865,0.000002620227,0.00019271378,0.000021510079,0.00091606466,0.00045036647,0.859419,0.00015391271],"about_ca_topic_score_codex":0.000052714196,"about_ca_topic_score_gemma":0.0000050745552,"teacher_disagreement_score":0.57728946,"about_ca_system_score_codex":0.000023027555,"about_ca_system_score_gemma":0.000086627275,"threshold_uncertainty_score":0.2722946},"labels":[],"label_agreement":null},{"id":"W4413506630","doi":"10.1177/08850666251370334","title":"“Lumbar Puncture and Brain Herniation in Acute Bacterial Meningitis: An Updated Narrative Review”","year":2025,"lang":"en","type":"letter","venue":"Journal of Intensive Care Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Lumbar puncture; Brain herniation; Meningitis; Narrative review; Bacterial meningitis; Intensive care medicine; Spinal Puncture; Lumbar disc herniation; Lumbar; Anesthesia; Surgery; Cerebrospinal fluid; Pathology","score_opus":0.009672392193705182,"score_gpt":0.285183489855304,"score_spread":0.2755110976615988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413506630","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16224472,0.031225812,0.000012147355,0.797389,0.0084825205,0.000424382,0.00011785038,0.00001594313,0.00008767313],"genre_scores_gemma":[0.015896196,0.011948393,0.000023802068,0.958295,0.00543871,0.000017155282,0.0063664094,0.000044476503,0.0019698492],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979658,0.00055095734,0.0009273818,0.00026918077,0.00005060972,0.00023604739],"domain_scores_gemma":[0.9929514,0.00011774602,0.00088333385,0.00019593263,0.0058234828,0.000028106471],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032046583,0.00035713537,0.0013451464,0.00047842882,0.00008407311,0.000016378484,0.00018152958,0.00085262,0.0010195413],"category_scores_gemma":[0.001488662,0.00023617977,0.00012310137,0.00020842293,0.00015281954,0.0001692055,0.000052680796,0.0021606963,0.0000042464458],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017898782,0.0000068345325,0.00006852045,0.00019896684,0.0004995839,0.000198389,0.0029096988,1.2451171e-7,0.07171003,0.0000015560635,0.92307013,0.0011571533],"study_design_scores_gemma":[0.002952083,0.0017292243,0.0014742754,0.007892588,0.00077114487,0.002109962,0.006041591,1.9931055e-7,0.0009098685,0.000025276424,0.97585124,0.00024253668],"about_ca_topic_score_codex":0.000107404296,"about_ca_topic_score_gemma":0.00008956653,"teacher_disagreement_score":0.16090606,"about_ca_system_score_codex":0.00013968539,"about_ca_system_score_gemma":0.00017276495,"threshold_uncertainty_score":0.99989367},"labels":[],"label_agreement":null},{"id":"W4413636457","doi":"10.1007/s13346-025-01954-1","title":"Isolation of bacterial extracellular vesicles from raw samples using a portable microstructured electrochemical device","year":2025,"lang":"en","type":"article","venue":"Drug Delivery and Translational Research","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Phytronix (Canada)","funders":"Eidgenössische Technische Hochschule Zürich","keywords":"Extracellular vesicles; Isolation (microbiology); Extracellular; Nanotechnology; Chemistry; Vesicle; Materials science; Biology; Microbiology; Biochemistry; Cell biology; Membrane","score_opus":0.03778449973375761,"score_gpt":0.312203045348637,"score_spread":0.27441854561487944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413636457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926334,0.005427357,0.0012911294,0.00014150557,0.00018701005,0.00014827898,0.00008309862,0.000012307318,0.00007590054],"genre_scores_gemma":[0.9982911,0.00011375474,0.0007666878,0.000006780017,0.000057012418,0.000005094961,0.00062503485,0.0000061095593,0.0001284522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990485,0.00019278676,0.00026331743,0.0002272448,0.000038386122,0.0002297688],"domain_scores_gemma":[0.99915683,0.00046150584,0.00004258578,0.00010302186,0.00021881,0.000017243869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030265807,0.0000958219,0.00017643523,0.00016854823,0.00028112717,0.000029943187,0.0000817263,0.00015446018,0.0006168826],"category_scores_gemma":[0.000036242072,0.00009212448,0.00004910376,0.0002290595,0.0001487595,0.00013679355,0.000028236853,0.00022614571,0.000004961051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059640576,0.000050652976,0.0066556237,0.000021444666,0.00011442945,2.5066635e-7,0.00016743664,0.0000075849134,0.9896079,0.0013621848,0.00010574782,0.0013103766],"study_design_scores_gemma":[0.0010647462,0.000023046474,0.029465092,0.0000509857,0.000045197343,0.0000053074486,0.00009682639,0.00018532305,0.9595562,0.0042378744,0.005172084,0.00009726509],"about_ca_topic_score_codex":0.0011284167,"about_ca_topic_score_gemma":0.00015900412,"teacher_disagreement_score":0.030051611,"about_ca_system_score_codex":0.00001301247,"about_ca_system_score_gemma":0.00016384014,"threshold_uncertainty_score":0.6754432},"labels":[],"label_agreement":null},{"id":"W4413787013","doi":"10.14745/ccdr.v51i08a04","title":"Effectiveness of the four-component protein-based meningococcal vaccine against Neisseria gonorrhoeae infections: Mounting evidence and public health implications for Canada","year":2025,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; Université Laval; Institut National de Santé Publique du Québec","funders":"","keywords":"Neisseria gonorrhoeae; Neisseriaceae; Neisseria meningitidis; Microbiology; Neisseria; Public health; Meningococcal vaccine; Virology; Component (thermodynamics); Biology; Medicine; Bacteria; Antibiotics; Genetics; Physics","score_opus":0.02565929340967667,"score_gpt":0.27627874721989054,"score_spread":0.2506194538102139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413787013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98667663,0.0035460198,0.00029981558,0.007296116,0.0004783857,0.0015027042,0.00012372211,0.000027484106,0.00004910855],"genre_scores_gemma":[0.9987175,0.000040272924,0.000023785604,0.00022502152,0.00000846911,0.00070433033,0.00017060757,0.000012323484,0.00009769979],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983961,0.0004961487,0.0005157574,0.0002558113,0.000016638734,0.0003195171],"domain_scores_gemma":[0.99748737,0.0007282021,0.00035795462,0.0009985215,0.00034423464,0.00008371488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000677773,0.00016773237,0.00035051946,0.00006418641,0.0010203223,0.00002954944,0.00029799473,0.000056461122,0.000009175148],"category_scores_gemma":[0.001116612,0.0001394986,0.000077108845,0.00034164856,0.000060717688,0.0000800792,0.00018312018,0.00019070161,6.617662e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031684467,0.00043589986,0.8025406,0.0017703769,0.0005801584,0.0000013044133,0.000016049757,0.00052623893,0.18313868,0.0032783893,0.0046039764,0.0027914457],"study_design_scores_gemma":[0.00087851763,0.00003855969,0.9186676,0.00081524113,0.0000716768,0.000025644229,0.000059219157,0.000088756155,0.002485369,0.000094209914,0.07659419,0.00018102411],"about_ca_topic_score_codex":0.95114905,"about_ca_topic_score_gemma":0.9677918,"teacher_disagreement_score":0.18065332,"about_ca_system_score_codex":0.00064757187,"about_ca_system_score_gemma":0.012732234,"threshold_uncertainty_score":0.99286467},"labels":[],"label_agreement":null},{"id":"W4413875129","doi":"10.21203/rs.3.rs-7199705/v1","title":"Test-Adjusted Estimation for Pertussis Incidence in Greater Toronto, Canada, 1993-2006","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Estimation; Test (biology); Incidence (geometry); Statistics; Geography; Economics; Mathematics; Biology","score_opus":0.04483382004571616,"score_gpt":0.359648061960642,"score_spread":0.3148142419149258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413875129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9767216,0.005825953,0.00040380566,0.0025263182,0.0033411593,0.0039089946,0.0038515374,0.00013842115,0.0032822061],"genre_scores_gemma":[0.98642683,0.00020014298,0.00014985325,0.000034187346,0.000096167685,0.00097341905,0.0011425749,0.000017133556,0.010959714],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9981359,0.00034250473,0.00038080532,0.0005106545,0.000058241218,0.0005718443],"domain_scores_gemma":[0.99799716,0.00087449455,0.00007685948,0.00048770857,0.00053213263,0.000031660755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000680459,0.0002218801,0.00037859502,0.00024726032,0.00027167436,0.000057305228,0.00033096617,0.00057524454,0.0008228112],"category_scores_gemma":[0.001246061,0.00019810707,0.000089925685,0.00020010908,0.00006506998,0.000092659306,0.0004921351,0.0007401656,0.000020941405],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018774294,0.0013908785,0.39363378,0.008628099,0.00085899397,0.00003721716,0.0029807298,0.0019862694,0.059260152,0.0024537763,0.40347636,0.1234163],"study_design_scores_gemma":[0.0034864035,0.0007419211,0.81853485,0.0039345436,0.000103608945,0.00003081528,0.0010345355,0.002397695,0.01913883,0.0011763868,0.1482938,0.0011265804],"about_ca_topic_score_codex":0.91559404,"about_ca_topic_score_gemma":0.9478893,"teacher_disagreement_score":0.4249011,"about_ca_system_score_codex":0.0012012704,"about_ca_system_score_gemma":0.0017994983,"threshold_uncertainty_score":0.90092057},"labels":[],"label_agreement":null},{"id":"W4413973019","doi":"10.1126/sciadv.adw7764","title":"Bordetellae colonization oligosaccharide (b-Cool), a glycan crucial for nasal colonization","year":2025,"lang":"en","type":"article","venue":"Science Advances","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Colonization; Bordetella bronchiseptica; Mucin; Microbiology; Biology; Bordetella; Bordetella pertussis; Bacteria","score_opus":0.009035494288804836,"score_gpt":0.29316478788959416,"score_spread":0.2841292936007893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413973019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9797742,0.0010519319,0.010996087,0.0005263925,0.006101875,0.00052143255,0.00003774717,0.000111535315,0.000878793],"genre_scores_gemma":[0.99760216,0.00006577054,0.00047588092,0.00014714984,0.00007126051,0.00007290482,0.000039632938,0.000004937439,0.0015202882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991899,0.00002549636,0.00019181131,0.00029926008,0.000019760848,0.0002737493],"domain_scores_gemma":[0.9994026,0.00007995883,0.0000867783,0.0001377885,0.00027885142,0.000014045177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024392593,0.000096669035,0.0001368651,0.00019007112,0.00080437487,0.00006403717,0.00022613174,0.0000814606,0.00009030704],"category_scores_gemma":[0.00031879646,0.00008718423,0.00003297119,0.0008765435,0.00033740132,0.00050058943,0.00005274963,0.000058311423,0.000027236025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001912725,0.000055517423,0.004073115,0.000017174276,0.0000131188945,6.833385e-8,0.00012512968,0.000096220414,0.959518,0.0067712637,0.00091048924,0.02822862],"study_design_scores_gemma":[0.0011085747,0.00027796894,0.013610095,0.000040783576,0.00002874223,0.0000064921505,0.00018322619,0.00007744005,0.72010106,0.002199044,0.26217085,0.00019570062],"about_ca_topic_score_codex":0.00008019012,"about_ca_topic_score_gemma":0.0003755388,"teacher_disagreement_score":0.26126036,"about_ca_system_score_codex":0.000057476063,"about_ca_system_score_gemma":0.00026472384,"threshold_uncertainty_score":0.61866826},"labels":[],"label_agreement":null},{"id":"W4414249203","doi":"10.3390/vaccines13090974","title":"Need for Invasive Meningococcal Disease Prevention Through Vaccination for Young Children in the Americas","year":2025,"lang":"en","type":"review","venue":"Vaccines","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"GlaxoSmithKline (Canada); Nova Scotia Health Authority","funders":"","keywords":"Vaccination; Meningococcal disease; Neisseria meningitidis; Incidence (geometry); Meningococcal vaccine; Immunization; Epidemiology","score_opus":0.03940267366262647,"score_gpt":0.3547905944993298,"score_spread":0.31538792083670336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414249203","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008488916,0.9892915,0.00095302705,0.0002876373,0.0014762969,0.006582065,0.00041510988,0.00006229391,0.00008321802],"genre_scores_gemma":[0.00056189613,0.9863421,0.000109985995,0.00005825249,0.00037263965,0.0056468206,0.0049878573,0.000036813653,0.0018836319],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99831134,0.00031171387,0.00060940464,0.00044323955,0.000014625586,0.00030969665],"domain_scores_gemma":[0.9982016,0.000936439,0.00037863437,0.00035257646,0.00011875158,0.000012010988],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027717018,0.00038011133,0.0009543527,0.00024275365,0.00027836955,0.00005554843,0.0003487855,0.00033446474,0.000082517225],"category_scores_gemma":[0.0005191211,0.00024978805,0.00060664606,0.00044002064,0.00001104877,0.0001556472,0.00006627801,0.00020616529,0.0000175663],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049093383,0.0006628351,0.0008787345,0.012987318,0.0010856609,5.202941e-7,0.00033477435,0.00000259513,0.0000970131,0.0043968745,0.042538196,0.93652457],"study_design_scores_gemma":[0.0018812325,0.0002478429,0.00404001,0.0028843489,0.001869724,0.000030225176,0.00007087988,8.44836e-7,0.000026837748,0.0014037649,0.98714364,0.00040063905],"about_ca_topic_score_codex":0.00010698337,"about_ca_topic_score_gemma":0.00015645898,"teacher_disagreement_score":0.94460547,"about_ca_system_score_codex":0.0000582626,"about_ca_system_score_gemma":0.00023776588,"threshold_uncertainty_score":0.9999954},"labels":[],"label_agreement":null},{"id":"W4414459592","doi":"10.1186/s12889-025-24434-0","title":"Tdap, MenACWY, HPV, seasonal influenza, and COVID-19 vaccination status among US teens aged 13–17 years in 2022","year":2025,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Biostatistics; Epidemiology; Vaccination; Public health; Seasonal influenza; Age groups","score_opus":0.03536428218239178,"score_gpt":0.3337625220382735,"score_spread":0.2983982398558817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414459592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99407476,0.0015410533,0.000322858,0.002012488,0.0006027738,0.00042452948,0.00008507557,0.00009231827,0.000844169],"genre_scores_gemma":[0.99452907,0.00025765286,0.000045169003,0.0032397718,0.000039293307,0.00006676772,0.00020342076,0.000011066049,0.0016078183],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99813426,0.00057346124,0.0003941086,0.00032481787,0.000024396584,0.0005489866],"domain_scores_gemma":[0.99925745,0.00020755737,0.00013784418,0.00021180752,0.00005373074,0.0001316324],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010556927,0.0001430485,0.00028214755,0.0004215609,0.00028983515,0.000069829395,0.00010689839,0.00021534991,0.0011841799],"category_scores_gemma":[0.0005183657,0.00014314933,0.000039691422,0.00051517197,0.000053285694,0.00023837971,0.00011265818,0.00032601145,0.000024192637],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065377964,0.00014408413,0.9515228,0.00009403271,0.000042224106,8.643461e-7,0.00054652087,0.000010769621,0.0006450476,0.001671123,0.03407465,0.011182497],"study_design_scores_gemma":[0.0017534394,0.00006733795,0.7529153,0.0000088717,0.000003629347,0.0000062407557,0.00021274088,0.000015338148,0.0000140570955,0.00011220677,0.24480137,0.00008941872],"about_ca_topic_score_codex":0.008454048,"about_ca_topic_score_gemma":0.022247883,"teacher_disagreement_score":0.21072672,"about_ca_system_score_codex":0.0003993849,"about_ca_system_score_gemma":0.0016072533,"threshold_uncertainty_score":0.99972886},"labels":[],"label_agreement":null},{"id":"W4414801503","doi":"10.1016/j.ejpb.2025.114890","title":"Design-of-experiments based development and in vitro evaluation of a cationic lipid-based triple adjuvanted subunit pertussis vaccine","year":2025,"lang":"en","type":"article","venue":"European Journal of Pharmaceutics and Biopharmaceutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; NanoMedicines Innovation Network","keywords":"Phosphatidylcholine; Adjuvant; In vitro; Solid lipid nanoparticle; Cationic liposome; Cationic polymerization; Cellular immunity; Liposome; Cytokine","score_opus":0.08162281120900058,"score_gpt":0.35162489098996436,"score_spread":0.2700020797809638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414801503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98906213,0.007531474,0.0021661366,0.00022124055,0.00065093447,0.0002950635,0.000012805586,0.000006678675,0.000053543412],"genre_scores_gemma":[0.99772584,0.0006361811,0.0014246145,0.00012568229,0.000021346224,0.0000031114528,0.000016308783,0.00001307633,0.000033831213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99783015,0.00095716945,0.0008385753,0.00014018588,0.00006475653,0.00016914448],"domain_scores_gemma":[0.9987305,0.0001412514,0.0004877071,0.0000991826,0.0005003637,0.00004101586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002357273,0.00016804614,0.0003382402,0.0004975839,0.00009179328,0.000015628779,0.00012930871,0.000056184635,0.0000820043],"category_scores_gemma":[0.00009093155,0.00014269205,0.00005036198,0.00033510235,0.00006715965,0.00006682113,0.00004889853,0.00023870468,0.0000014467931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016492348,0.00037702886,0.0024444824,0.00009016178,0.00019275877,0.000002203139,0.00021377846,0.00040391216,0.9574067,0.0000035767057,0.000051110226,0.037165076],"study_design_scores_gemma":[0.011521347,0.00013019309,0.0061282353,0.00015885742,0.00037841476,0.000014009303,0.00007573705,0.009453923,0.96142596,0.000002634431,0.010587546,0.00012316753],"about_ca_topic_score_codex":0.0000039291954,"about_ca_topic_score_gemma":0.0000012132411,"teacher_disagreement_score":0.03704191,"about_ca_system_score_codex":0.000055358916,"about_ca_system_score_gemma":0.0003378165,"threshold_uncertainty_score":0.5818813},"labels":[],"label_agreement":null},{"id":"W4415099628","doi":"10.1016/j.jiph.2025.102991","title":"Characteristics of an uncommon sequence type of serotype b Haemophilus influenzae causing an increase in invasive disease in British Columbia, Canada","year":2025,"lang":"en","type":"article","venue":"Journal of Infection and Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Public Health Agency of Canada","funders":"Public Health Agency of Canada; Wellcome Trust","keywords":"Serotype; Haemophilus influenzae; Sequence (biology); Pasteurellaceae; Disease; Multilocus sequence typing; Transmission (telecommunications)","score_opus":0.030506658507618228,"score_gpt":0.2977967481318261,"score_spread":0.26729008962420786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415099628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859995,0.00026110467,0.0000057764555,0.0002929834,0.00066445174,0.00011049217,0.000046931844,0.0000037676984,0.000014555381],"genre_scores_gemma":[0.9990612,0.00056377554,0.000011492875,0.00028040152,0.000025138801,0.0000013279056,0.00003599218,0.0000043474306,0.000016286187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986471,0.0004069158,0.000667923,0.00009476043,0.000024060935,0.00015924273],"domain_scores_gemma":[0.9989403,0.000069727255,0.00045786364,0.00009762551,0.0003409009,0.00009361384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061874243,0.00006303328,0.00034646937,0.00023179624,0.0000790747,0.000038863916,0.000044584023,0.00008758165,0.00005844236],"category_scores_gemma":[0.00045134063,0.000081923805,0.00002225828,0.0004211979,0.000050098115,0.00031730547,0.000023335675,0.00025329564,1.00113155e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009055339,0.00026781528,0.9865564,0.00014124933,0.000022084412,0.00000992164,0.000086359476,0.000010277343,0.002744749,0.000027240416,0.00010974616,0.009933586],"study_design_scores_gemma":[0.00079725304,0.00037965304,0.99636596,0.00026780315,0.000008054644,0.00010830182,0.000078160236,0.0000104952,0.00006588008,0.00005751173,0.0018030496,0.000057885834],"about_ca_topic_score_codex":0.9484364,"about_ca_topic_score_gemma":0.9829371,"teacher_disagreement_score":0.03450074,"about_ca_system_score_codex":0.00019552615,"about_ca_system_score_gemma":0.0035692984,"threshold_uncertainty_score":0.6331782},"labels":[],"label_agreement":null},{"id":"W4415601885","doi":"10.1016/j.gim.2025.101567","title":"Response to Krutish et al","year":2025,"lang":"en","type":"article","venue":"Genetics in Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"","score_opus":0.01663649759638593,"score_gpt":0.3287417397376519,"score_spread":0.312105242141266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415601885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9377495,0.001532313,0.00038687178,0.055389225,0.0022834784,0.00012805728,0.00000404297,0.000024565625,0.0025019506],"genre_scores_gemma":[0.9785848,0.00026468054,0.00018290553,0.015524782,0.00002277556,0.000018152847,0.000015584366,0.000005660235,0.0053806375],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993434,0.00017264842,0.00017973207,0.00014936685,0.000008467227,0.00014640967],"domain_scores_gemma":[0.9996,0.00014522231,0.000016967504,0.00019097926,0.00003507685,0.000011784159],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005470479,0.00007124898,0.00015063633,0.00020472448,0.00004029606,0.0000034165348,0.00009429807,0.0000766874,0.00052744953],"category_scores_gemma":[0.00028343388,0.00005969908,0.000013652383,0.0002568441,0.000051365943,0.000008333524,0.00006245672,0.00013329953,0.00010102989],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035218045,0.000030534648,0.0042779143,0.0000023206796,0.000017956141,0.000001216374,0.0001977771,0.000010180142,0.7839713,0.0005486058,0.20479944,0.0057905894],"study_design_scores_gemma":[0.0010621191,0.0002116989,0.11431128,0.00006456374,0.000007647848,0.0000085348065,0.00007900295,0.0000010575766,0.014787481,0.00023637536,0.869178,0.000052257605],"about_ca_topic_score_codex":0.00010514773,"about_ca_topic_score_gemma":0.00015517806,"teacher_disagreement_score":0.7691838,"about_ca_system_score_codex":0.00002021031,"about_ca_system_score_gemma":0.00003853183,"threshold_uncertainty_score":0.5775203},"labels":[],"label_agreement":null},{"id":"W4415757151","doi":"10.1101/2025.10.30.685603","title":"Rationally designed minimized TbpB confers broad protection against meningococcal infection","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Armand Frappier Museum; University of Toronto","funders":"Common Fund; Argonne National Laboratory; National Institute of General Medical Sciences; Office of Science; National Institutes of Health; University of Toronto; U.S. Department of Energy","keywords":"Immunogen; Immune system; Antigen; Meningococcal vaccine; Antigenic variation; Neisseria meningitidis; Epitope; Meningococcal disease","score_opus":0.01748826526604833,"score_gpt":0.23037250504586446,"score_spread":0.21288423977981613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415757151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9790896,0.000592965,0.009621274,0.0002914017,0.007215306,0.0019817953,0.00026254804,0.0008710458,0.000074037416],"genre_scores_gemma":[0.9971141,0.00026808731,0.00080069393,0.00013039209,0.00038811736,0.001061278,0.000008581606,0.00006348255,0.00016523415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997155,0.00054904347,0.0007507082,0.0009711472,0.000056284098,0.00051778747],"domain_scores_gemma":[0.99776065,0.00009540426,0.00053453847,0.000770997,0.00076873705,0.000069645466],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0005696283,0.000633506,0.0007301613,0.0005482083,0.00052841136,0.00019886343,0.0002818313,0.0014531062,0.0002457764],"category_scores_gemma":[0.000330837,0.00067271164,0.00028101212,0.00046708758,0.00013522105,0.00020309101,0.0003050989,0.0010554752,0.00020250809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025959773,0.00021354257,0.0011743897,0.0001771112,0.0006144278,0.000001919505,0.000009157317,0.00009290276,0.99570364,0.0006796585,0.0010581472,0.000015507638],"study_design_scores_gemma":[0.0026042694,0.00013857847,0.029896438,0.000423346,0.00031288146,6.9890646e-8,0.0000019577928,0.0000817752,0.9122447,0.0000027132187,0.053447813,0.0008454575],"about_ca_topic_score_codex":0.00040091557,"about_ca_topic_score_gemma":0.0000233145,"teacher_disagreement_score":0.08345894,"about_ca_system_score_codex":0.00030769,"about_ca_system_score_gemma":0.0009252725,"threshold_uncertainty_score":0.99984324},"labels":[],"label_agreement":null},{"id":"W4416042259","doi":"10.1101/2025.11.06.685839","title":"Structure-based engineering of a nutrient acquisition protein enhances neutralizing antibodies and protection for the development of a gonococcal vaccine","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"","keywords":"Immunogen; Immunogenicity; Antigen; Immune system; Antibody; Immunity; Mutant; Immunization","score_opus":0.01155966471276609,"score_gpt":0.22134950384024,"score_spread":0.2097898391274739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416042259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9715975,0.0014935734,0.024023725,0.00006634874,0.0007308669,0.001814325,0.00020801843,0.00006549297,1.8612913e-7],"genre_scores_gemma":[0.9953235,0.000031661566,0.00398553,0.000004886925,0.000058587113,0.00057477906,0.0000013345843,0.000017974586,0.0000017877453],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886465,0.00005682548,0.00051169825,0.00034092146,0.000017936416,0.00020797497],"domain_scores_gemma":[0.9988949,0.00007451409,0.00038793092,0.00029835547,0.00032889418,0.000015421967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028126474,0.00026691167,0.00042165982,0.00021330036,0.00017636678,0.00002724427,0.00014863144,0.00033748854,0.000012825948],"category_scores_gemma":[0.00007396388,0.00021458876,0.00008324682,0.00018387301,0.000044395685,0.00005052401,0.00013213801,0.00025083224,3.4416075e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018213854,0.00006420614,0.00048487258,0.0013851733,0.00025743732,3.4304872e-8,0.000026437669,0.00010032298,0.9971257,0.00035299873,0.0000041797516,0.000016539512],"study_design_scores_gemma":[0.00069160096,0.00007725652,0.042935096,0.000804983,0.00008773601,1.1360443e-8,0.0000044388476,0.00013626169,0.9539361,0.000002004751,0.0011374151,0.0001871196],"about_ca_topic_score_codex":0.000047854555,"about_ca_topic_score_gemma":0.000008246996,"teacher_disagreement_score":0.04318958,"about_ca_system_score_codex":0.00005395588,"about_ca_system_score_gemma":0.0002572263,"threshold_uncertainty_score":0.87506753},"labels":[],"label_agreement":null},{"id":"W4416168546","doi":"10.1016/j.jadohealth.2025.09.030","title":"Racial and Ethnic Disparities in Meningococcal Vaccination Coverage and Disease Burden Among U.S. Adolescents","year":2025,"lang":"en","type":"article","venue":"Journal of Adolescent Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; University of Regina","funders":"Janssen Canada; Natural Sciences and Engineering Research Council of Canada; Sanofi Pasteur; Centers for Disease Control and Prevention; Notsew Orm Sands Foundation; Sanofi","keywords":"Socioeconomic status; Disease burden; Meningococcal disease; Ethnic group; Burden of disease; Race (biology); Disease","score_opus":0.012519643485329862,"score_gpt":0.29682650460685195,"score_spread":0.2843068611215221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416168546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98816,0.007957084,0.00020928515,0.0024921626,0.00095703406,0.00018940803,0.0000076831275,0.000007757079,0.0000195621],"genre_scores_gemma":[0.9959128,0.0035167306,0.00000831956,0.00033742897,0.00010803683,0.0000018065518,0.000005211151,0.00000524444,0.00010441702],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990169,0.0002031835,0.00044297182,0.000119816206,0.000020525824,0.0001966015],"domain_scores_gemma":[0.99952906,0.000029817846,0.00023614585,0.000065684435,0.00006293881,0.000076355296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003767834,0.000106204665,0.00028150657,0.00025228193,0.00012325322,0.000026785425,0.00005571854,0.000092039656,0.000018122122],"category_scores_gemma":[0.00009541966,0.00009197609,0.00004003153,0.00011642703,0.000040423725,0.00017135461,0.000051460585,0.00038500046,0.0000010866179],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008105956,0.00026792378,0.94511884,0.00043065622,0.00003826293,0.000003001733,0.00040964352,0.000009795744,0.0026574992,0.00040653453,0.0020551132,0.047792148],"study_design_scores_gemma":[0.0023547513,0.0001374216,0.9946173,0.00075161015,0.00002040759,0.000015811453,0.00008931517,0.000011440298,0.000054388966,0.00023249882,0.0016462528,0.000068794645],"about_ca_topic_score_codex":0.00018145406,"about_ca_topic_score_gemma":0.00016446193,"teacher_disagreement_score":0.049498484,"about_ca_system_score_codex":0.00009265585,"about_ca_system_score_gemma":0.00017620454,"threshold_uncertainty_score":0.37506762},"labels":[],"label_agreement":null},{"id":"W4416297912","doi":"10.1080/21645515.2025.2565925","title":"Impact of a multicomponent intervention on maternal Tdap vaccination coverage during a major pertussis resurgence in the province of Quebec, Canada: A quasi-experimental study","year":2025,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre Intégré de Santé et Services Sociaux de Chaudière-Appalache; Institut National de Santé Publique du Québec; Université Laval","funders":"Fonds de recherche du Québec","keywords":"Vaccination; Intervention (counseling); Logistic regression; Pertussis vaccine; Immunization; Pregnancy","score_opus":0.014818199050172714,"score_gpt":0.30387624365760846,"score_spread":0.2890580446074357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416297912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979283,0.00087401347,0.000015030827,0.000055600016,0.0003393558,0.0007148974,0.0000207712,0.000014864223,0.000037135258],"genre_scores_gemma":[0.99925953,0.000020620713,0.0000017713718,0.000017853608,0.000011459532,0.000055381952,0.0000216773,0.0000132589585,0.00059842365],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99846774,0.00037771906,0.00067960157,0.00021803993,0.0000480789,0.00020881172],"domain_scores_gemma":[0.99912244,0.000095054915,0.00031182534,0.00037301038,0.000090839625,0.0000068329027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002455071,0.00021260926,0.00035741072,0.00023870368,0.00016997142,0.00002388592,0.00028833468,0.00008381426,0.0002957555],"category_scores_gemma":[0.000014765619,0.00015004416,0.00015564641,0.00020448092,0.000019011406,0.00008720636,0.000063417596,0.00018622982,0.0000018099283],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020386393,0.008372294,0.23691542,0.00009135412,0.00068869226,0.000003921276,0.0013973067,0.000055796965,0.7483055,0.00027701995,0.000085464686,0.0017686198],"study_design_scores_gemma":[0.004116259,0.0010676344,0.9141043,0.0001329956,0.000052545805,0.0000061612905,0.0006429248,0.000010072468,0.0796565,0.000013667765,0.00007905672,0.000117900534],"about_ca_topic_score_codex":0.54254556,"about_ca_topic_score_gemma":0.5460643,"teacher_disagreement_score":0.6771889,"about_ca_system_score_codex":0.0003180961,"about_ca_system_score_gemma":0.00014544482,"threshold_uncertainty_score":0.61186236},"labels":[],"label_agreement":null},{"id":"W4416469289","doi":"10.1038/s42003-025-09025-4","title":"Secretory phospholipase A2-IIA targets bacterial extracellular vesicles to modulate immune signaling","year":2025,"lang":"en","type":"article","venue":"Communications Biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec; Université Laval","funders":"Centre Hospitalier Universitaire de Québec; Ministry of Education, Culture, Sports, Science and Technology; Fonds de Recherche du Québec - Santé; Arthritis Society; Exploratory Research for Advanced Technology; Government of Canada; Natural Sciences and Engineering Research Council of Canada; Japan Agency for Medical Research and Development; Université Laval","keywords":"Extracellular; Immune system; Lipid signaling; Phospholipase; Lipid metabolism; Signal transduction; Escherichia coli; Lipidome; Inflammation; Enzyme","score_opus":0.021282491958848165,"score_gpt":0.2801356884593642,"score_spread":0.258853196500516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416469289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744594,0.017099597,0.0017312105,0.0021626444,0.0024634276,0.0004289719,0.00009606674,0.0001975475,0.0013610991],"genre_scores_gemma":[0.99506325,0.00043512761,0.0012850293,0.00017463784,0.00005875904,0.00014381537,0.00087245245,0.000018019357,0.0019488914],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982418,0.00050727086,0.0005332952,0.00033194595,0.00000797931,0.00037770235],"domain_scores_gemma":[0.9977177,0.00026614388,0.00013003086,0.0016998241,0.00015488539,0.00003144661],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003608252,0.00022324224,0.00037560338,0.00025297696,0.0006925873,0.000032553526,0.0009547466,0.00036813345,0.00092711695],"category_scores_gemma":[0.0001549045,0.00021638423,0.00012746046,0.00034941846,0.00027603793,0.000082118,0.0007369783,0.00034216826,0.0005721972],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010224068,0.00016217603,0.00081662275,0.000007116919,0.00016485465,2.1670466e-7,0.00016339667,0.0000075157623,0.97556585,0.014907256,0.0011866566,0.006916095],"study_design_scores_gemma":[0.00092056487,0.00012454763,0.0051255594,0.00004639349,0.00006698746,0.000011376627,0.00010685559,0.000027023427,0.401265,0.001678204,0.5903471,0.00028038927],"about_ca_topic_score_codex":0.00037617443,"about_ca_topic_score_gemma":0.00007365489,"teacher_disagreement_score":0.58916044,"about_ca_system_score_codex":0.0000613927,"about_ca_system_score_gemma":0.00009233037,"threshold_uncertainty_score":0.9999862},"labels":[],"label_agreement":null},{"id":"W4416813255","doi":"10.1155/jotm/2709448","title":"Epidemiology and Determinants of Antirabies Vaccine Full‐Dose Completion Among Patients Attending the Nyagatare District Hospital, Rwanda: A Facility‐Based Cross‐Sectional Study","year":2025,"lang":"en","type":"article","venue":"Journal of Tropical Medicine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Epidemiology; Psychological intervention; Quarter (Canadian coin); Vaccination; Compliance (psychology)","score_opus":0.027464579188190164,"score_gpt":0.32113811231417305,"score_spread":0.2936735331259829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416813255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996221,0.0006657246,0.00044240427,0.0008303351,0.0015320188,0.00025783066,0.00003427102,0.0000069753037,0.000009461838],"genre_scores_gemma":[0.99972874,0.000051013038,0.000014259535,0.000045896224,0.00009701864,0.0000049652567,0.00001886117,0.0000033900162,0.00003585709],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981109,0.00044179818,0.0010609567,0.00016368524,0.000042677337,0.0001800007],"domain_scores_gemma":[0.9980019,0.0008861584,0.0005849103,0.00015279921,0.0003443863,0.00002985466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005627988,0.00014600411,0.00066358794,0.0001761956,0.00024489206,0.000006133614,0.0001520928,0.00013140115,0.00013034225],"category_scores_gemma":[0.001859146,0.00007889982,0.00009903619,0.00016493278,0.0003554875,0.00008362123,0.00006711588,0.00035506045,0.0000014662537],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006810091,0.00042881817,0.9942966,0.000035528126,0.00014660758,0.0000017972762,0.00006045474,0.0000038619937,0.002119882,0.000021267157,0.0008371977,0.0013669836],"study_design_scores_gemma":[0.0052378564,0.0035368514,0.9899181,0.000112938564,0.00012882998,0.000023587289,0.00017157946,0.000017053162,0.00017732894,0.00005806776,0.0005575441,0.00006025883],"about_ca_topic_score_codex":0.00016487107,"about_ca_topic_score_gemma":0.000061685365,"teacher_disagreement_score":0.0045568473,"about_ca_system_score_codex":0.000037652124,"about_ca_system_score_gemma":0.000034409197,"threshold_uncertainty_score":0.3217441},"labels":[],"label_agreement":null},{"id":"W4417011994","doi":"10.1186/s12889-025-25726-1","title":"Modelling the epidemiological impact and cost-effectiveness of possible changes to the meningococcal vaccination schedule for adolescents and young adults in the United States","year":2025,"lang":"en","type":"article","venue":"BMC Public Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; University of Toronto","funders":"Sanofi France","keywords":"Meningococcal disease; Vaccination; Meningococcal vaccine; Epidemiology; Biostatistics; Young adult; Incidence (geometry); Neisseria meningitidis; Public health","score_opus":0.07379321792733423,"score_gpt":0.3676163769428239,"score_spread":0.29382315901548967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417011994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97286826,0.0008464499,0.01652299,0.0077870134,0.00016815531,0.0017439018,0.000044626497,0.000012484381,0.0000061251594],"genre_scores_gemma":[0.9988407,0.0002921491,0.000052104122,0.000402217,0.000018674376,0.0002822276,0.00009797082,0.00000391915,0.00001005858],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979464,0.0013859653,0.00021570458,0.00016882189,0.0000123442915,0.00027080157],"domain_scores_gemma":[0.9985497,0.0010985188,0.000089128465,0.000142081,0.000099766985,0.00002082612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003723795,0.00010004791,0.00021446723,0.00014188039,0.00032635077,0.000034738852,0.00012702325,0.00009213102,0.000003856987],"category_scores_gemma":[0.00040139002,0.00004433499,0.000028433686,0.00036906806,0.000038926413,0.00005249821,0.000057517333,0.0001566076,4.6005908e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037784053,0.0009847691,0.89626014,0.0016850466,0.0002474571,1.4423627e-7,0.010478075,0.010264147,0.0035800273,0.022258734,0.0026332114,0.04782985],"study_design_scores_gemma":[0.0022915856,0.00064933585,0.9670251,0.00024324743,0.000014075356,0.000013226876,0.0021529833,0.01937429,0.00019753016,0.00056069775,0.0073786713,0.000099230885],"about_ca_topic_score_codex":0.004025043,"about_ca_topic_score_gemma":0.0012711157,"teacher_disagreement_score":0.070764996,"about_ca_system_score_codex":0.000048967988,"about_ca_system_score_gemma":0.00009600942,"threshold_uncertainty_score":0.6084688},"labels":[],"label_agreement":null},{"id":"W4417136300","doi":"10.1001/jama.2025.21454","title":"Prediction of Bacteremia and Bacterial Meningitis Among Febrile Infants Aged 28 Days or Younger","year":2025,"lang":"en","type":"article","venue":"JAMA","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; McGill University Health Centre; Montreal Children's Hospital","funders":"McGill University Health Centre; McGill University","keywords":"Bacterial meningitis; Bacteremia; Lumbar puncture; Meningitis; Microbiological culture","score_opus":0.012770408790894099,"score_gpt":0.23246412664149285,"score_spread":0.21969371785059874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417136300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956851,0.00012449358,0.000023080634,0.00008139519,0.0023953463,0.0001563192,0.00016739257,0.000056128963,0.0013107179],"genre_scores_gemma":[0.995978,0.00007693371,0.000028067148,0.000019663243,0.00012373558,0.00001746861,0.00016912515,0.0000075786706,0.0035794054],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99930274,0.000089185356,0.00026115266,0.00018220242,0.000009597075,0.0001551431],"domain_scores_gemma":[0.9995878,0.00007963942,0.00009334943,0.00016302682,0.00006319948,0.0000129921245],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012673835,0.000111417976,0.00022458514,0.000112584865,0.00012778556,0.00004206223,0.000065333756,0.00026872213,0.0016581824],"category_scores_gemma":[0.000110484405,0.00008986718,0.000040564326,0.00012889378,0.00008950572,0.00025683944,0.00007688805,0.00014134508,0.000015000445],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065688347,0.0000435976,0.061535887,0.000028232897,0.00015286022,6.706293e-7,0.0001681438,1.5211054e-7,0.9181902,0.00012654686,0.011464686,0.0076321648],"study_design_scores_gemma":[0.0022067968,0.000133306,0.84298974,0.00009165706,0.00006072745,0.000023499048,0.000048456244,0.0000016840092,0.11472239,0.000027465272,0.039617077,0.000077177385],"about_ca_topic_score_codex":0.00045373768,"about_ca_topic_score_gemma":0.00011425293,"teacher_disagreement_score":0.80346775,"about_ca_system_score_codex":0.000017024853,"about_ca_system_score_gemma":0.00003591639,"threshold_uncertainty_score":0.99925447},"labels":[],"label_agreement":null},{"id":"W4417262288","doi":"10.1186/s12879-025-12254-x","title":"Test-adjusted estimation for pertussis incidence in greater Toronto, Canada, 1993–2006","year":2025,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Public Health; Public Health Ontario; University of Toronto","funders":"","keywords":"Incidence (geometry); Estimation; Parasitology; Tropical medicine; Medical microbiology; Epidemiology","score_opus":0.00880076205340211,"score_gpt":0.24404611833876166,"score_spread":0.23524535628535956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417262288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944907,0.0012265065,0.000961552,0.000087767046,0.0015153314,0.00049709476,0.00025820048,0.00011817522,0.00084470527],"genre_scores_gemma":[0.99776965,0.00002089205,0.000031032858,0.00016161519,0.0000398676,0.00028511588,0.00016633065,0.000010098544,0.0015153881],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99917966,0.000065746026,0.0002522622,0.00024051584,0.000013134447,0.00024869916],"domain_scores_gemma":[0.9992717,0.0003619198,0.00006435605,0.00018722465,0.00009370749,0.000021085618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055219476,0.00015557274,0.0002142346,0.00008987713,0.00020489986,0.00002667427,0.000079889964,0.00011643359,0.00038231292],"category_scores_gemma":[0.00053252955,0.00014019058,0.0000708175,0.00015252177,0.000033890447,0.00015646506,0.00003567333,0.000059801652,0.000013725494],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010996822,0.00021283088,0.97950923,0.0000933795,0.000050203307,6.5006265e-7,0.00003840088,0.00015520137,0.0037765296,0.00043263004,0.011965702,0.0036552895],"study_design_scores_gemma":[0.0017337748,0.00010241326,0.9880394,0.00007512743,0.00010665362,0.000011478188,0.000058168047,0.00022595904,0.0017468582,0.00022561115,0.007479882,0.00019469278],"about_ca_topic_score_codex":0.53410226,"about_ca_topic_score_gemma":0.8995689,"teacher_disagreement_score":0.36546665,"about_ca_system_score_codex":0.00036857263,"about_ca_system_score_gemma":0.0004810134,"threshold_uncertainty_score":0.57168055},"labels":[],"label_agreement":null},{"id":"W52009108","doi":"10.1016/s0755-4982(04)98543-0","title":"Méningites à examen bactériologique direct négatif","year":2004,"lang":"fr","type":"article","venue":"La Presse Médicale","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Viral meningitis; Meningitis; Medicine; Gram staining; Outbreak; Emergency department; Antibiotics; Internal medicine; Differential diagnosis; Bacterial meningitis; Virology; Pediatrics; Microbiology; Biology; Pathology","score_opus":0.013231390870116365,"score_gpt":0.2465651626650225,"score_spread":0.23333377179490614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W52009108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8748179,0.051848646,0.0007029584,0.004118805,0.0050698966,0.00041123445,0.00017434426,0.00032028207,0.06253592],"genre_scores_gemma":[0.9457443,0.0044572446,0.0005448212,0.00029462262,0.00055978453,0.00007908501,0.00010751068,0.000044728436,0.048167955],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978507,0.0006083628,0.00039480647,0.00046058733,0.000021412801,0.0006641295],"domain_scores_gemma":[0.9987742,0.0005007401,0.00013987676,0.00042067224,0.00007264693,0.00009187289],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00043627448,0.000314279,0.0004641899,0.000082980776,0.00030981068,0.00008210863,0.0002647783,0.0010211475,0.0073482683],"category_scores_gemma":[0.00032749542,0.00028607305,0.00017499324,0.00017900617,0.00056835514,0.0002120347,0.00019177781,0.00064406893,0.0015012914],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033496055,0.0025829442,0.012491813,0.00032725622,0.0011667014,0.000079768426,0.0016758023,0.00033372693,0.82784814,0.06936719,0.038331788,0.045459915],"study_design_scores_gemma":[0.0016925732,0.00036568948,0.01528075,0.00031148305,0.00012706149,0.00028290975,0.000065800166,0.0000023593243,0.0995332,0.0032656388,0.87867993,0.00039259295],"about_ca_topic_score_codex":0.0013387948,"about_ca_topic_score_gemma":0.00013186592,"teacher_disagreement_score":0.8403482,"about_ca_system_score_codex":0.00007363154,"about_ca_system_score_gemma":0.00016135132,"threshold_uncertainty_score":0.9999592},"labels":[],"label_agreement":null},{"id":"W576974850","doi":"10.71781/3359","title":"Étude d'un variant de la toxine STb produite par Escherichia coli","year":2009,"lang":"fr","type":"dissertation","venue":"Open MIND","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Escherichia coli; Chemistry; Microbiology; Biology; Biochemistry; Gene","score_opus":0.013682947081696765,"score_gpt":0.28785890862091845,"score_spread":0.2741759615392217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W576974850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97985506,0.0016511916,0.000050427363,0.0003821042,0.002221747,0.00095302414,0.00013849909,0.0000063742036,0.014741578],"genre_scores_gemma":[0.9213496,0.0009131112,0.005365433,0.00013111037,0.0004917964,0.00014062652,0.003241074,0.00006920758,0.06829803],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740314,0.0008033723,0.00057230616,0.00065664016,0.000022201386,0.0005423291],"domain_scores_gemma":[0.9987915,0.00015132022,0.00038408887,0.0004531653,0.00015154874,0.00006835592],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00079005666,0.00046910017,0.000678257,0.00010475311,0.000539908,0.00030963012,0.00059234776,0.00132701,0.020503283],"category_scores_gemma":[0.00014212882,0.000449328,0.00015254681,0.00025823992,0.00010712337,0.0002204072,0.00012664155,0.0007621749,0.0020157315],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064627896,0.0009624363,0.00080285186,0.00003641088,0.0005707865,0.000032070184,0.0021587696,0.000009836194,0.8716783,0.00033381986,0.0013192038,0.12144927],"study_design_scores_gemma":[0.0018420574,0.0005976467,0.1657005,0.0002984325,0.0005028249,0.00021614923,0.00043300513,0.000006682159,0.39719602,0.00013096732,0.43245563,0.00062009407],"about_ca_topic_score_codex":0.0017218818,"about_ca_topic_score_gemma":0.0020181492,"teacher_disagreement_score":0.47448224,"about_ca_system_score_codex":0.00007975867,"about_ca_system_score_gemma":0.00041646237,"threshold_uncertainty_score":0.9999695},"labels":[],"label_agreement":null},{"id":"W57796164","doi":"10.1093/pch/11.1.31","title":"Response to ‘Benefits of glucocorticoids in the treatment of bacterial meningitis in children: End of the controversy?’","year":2006,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Bacterial meningitis; Medicine; Meningitis; Intensive care medicine; Pediatrics","score_opus":0.007057375849435375,"score_gpt":0.2361723732925168,"score_spread":0.22911499744308142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W57796164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944716,0.0024429883,0.000002102205,0.0015648633,0.0004557614,0.0007130802,0.00027527526,0.000004977965,0.000069362526],"genre_scores_gemma":[0.9990945,0.0006259533,0.000016868857,0.000066999724,0.00010595857,0.000022375043,0.000042863423,0.000007405883,0.000017089798],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842376,0.00052231736,0.00062797783,0.00015165971,0.00003220272,0.0002421033],"domain_scores_gemma":[0.99905145,0.00030819402,0.00031458293,0.00027395927,0.000039368217,0.000012438081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005266566,0.000120613106,0.00038079207,0.00019882411,0.00007254192,0.0000037448688,0.0001510453,0.000105906,0.000051349776],"category_scores_gemma":[0.00007794909,0.000074692995,0.00010062566,0.00048426221,0.00005578763,0.000025565394,0.000027185491,0.000099219564,0.0000024727874],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029134566,0.0023711477,0.91312975,0.000032806525,0.000074367475,3.1260677e-7,0.0038531541,0.00020634671,0.06443984,0.0024661252,0.0007745933,0.009738102],"study_design_scores_gemma":[0.003166191,0.0011114867,0.98274654,0.000023413402,0.000019314095,0.00001232593,0.000062575964,2.8443006e-7,0.009534063,0.000029027653,0.0032348963,0.000059865528],"about_ca_topic_score_codex":0.008212865,"about_ca_topic_score_gemma":0.0022558677,"teacher_disagreement_score":0.06961681,"about_ca_system_score_codex":0.00007817038,"about_ca_system_score_gemma":0.0001402734,"threshold_uncertainty_score":0.9983915},"labels":[],"label_agreement":null},{"id":"W593577944","doi":"10.1093/pch/16.1.34","title":"Le vaccin FluMist : des réponses à vos questions – Résumé","year":2011,"lang":"fr","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.02524225534622913,"score_gpt":0.2641509300353457,"score_spread":0.23890867468911656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W593577944","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42811936,0.45488235,0.00296549,0.037492663,0.027728336,0.0017293874,0.001247697,0.00069231546,0.04514242],"genre_scores_gemma":[0.9212845,0.069034226,0.00095551735,0.001231393,0.0017225329,0.000042861906,0.00019590999,0.000078562705,0.00545447],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967496,0.000845405,0.0007837862,0.000524803,0.00002995834,0.0010664419],"domain_scores_gemma":[0.99850416,0.00019601887,0.00036261257,0.0005082312,0.00020642359,0.00022254093],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00071993674,0.00038719334,0.0005718202,0.0003235096,0.0018502306,0.000043751996,0.00027823518,0.0005844154,0.0024969268],"category_scores_gemma":[0.00023298767,0.00041583396,0.00023959353,0.0006494791,0.00028363714,0.00026998407,0.00014353558,0.0008208576,0.0016141076],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077693444,0.009300358,0.2365419,0.0024289251,0.0010880256,0.000025410432,0.014148588,0.000020994195,0.0023942764,0.34615633,0.2920197,0.0950986],"study_design_scores_gemma":[0.0018560484,0.0009821621,0.33077654,0.0002096504,0.0001904587,0.00053325744,0.0004101537,0.000004640388,0.001024191,0.0031634402,0.6602115,0.0006379453],"about_ca_topic_score_codex":0.029183414,"about_ca_topic_score_gemma":0.00795057,"teacher_disagreement_score":0.49316517,"about_ca_system_score_codex":0.00018173821,"about_ca_system_score_gemma":0.001224216,"threshold_uncertainty_score":0.99982935},"labels":[],"label_agreement":null},{"id":"W612713991","doi":"","title":"Preventing tetanus, diphtheria, and pertussis among adults: use of tetanus toxoid, reduced diphtheria toxoid and acellular pertussis vaccine recommendations of the Advisory Committee on Immunization Practices (ACIP) and recommendation of ACIP, supported by the Healthcare Infection Control Practices Advisory Committee (HICPAC), for use of Tdap among health-care personnel.","year":2006,"lang":"en","type":"article","venue":"PubMed","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":373,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tetanus; Diphtheria; Medicine; Toxoid; Booster dose; Pediatrics; Whooping cough; Immunization; Pertussis vaccine; Booster (rocketry); Vaccination; Immunology","score_opus":0.034028701259794264,"score_gpt":0.26481997981986993,"score_spread":0.23079127856007567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W612713991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882381,0.002064949,0.000075533884,0.0055082985,0.000390097,0.0029694282,0.00070974,0.000028874028,0.000014967418],"genre_scores_gemma":[0.9968535,0.0013901098,0.00011647809,0.00007559955,0.00004024749,0.0005486705,0.0008044929,0.000038472055,0.00013246677],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964473,0.001626244,0.0011173422,0.00040544593,0.000061133316,0.00034250433],"domain_scores_gemma":[0.99256116,0.001804032,0.004616332,0.00046613594,0.0005072684,0.000045066747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010018531,0.00031163316,0.0006764388,0.00018914456,0.0006549952,0.00006229968,0.00014504744,0.0002883589,0.00003401482],"category_scores_gemma":[0.0016322967,0.00022405342,0.00013258263,0.00031192828,0.00027282152,0.0009786065,0.0001077731,0.00033641048,9.8047764e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002747582,0.0012217399,0.7429968,0.0013479445,0.0011062929,9.7558036e-8,0.0072183623,0.000026323905,0.10815109,0.00008030913,0.002762629,0.13234082],"study_design_scores_gemma":[0.004228556,0.00074400235,0.949804,0.00035022417,0.00052341854,0.000019277186,0.00748681,0.00014395933,0.026006985,0.000020623804,0.010391974,0.00028018397],"about_ca_topic_score_codex":0.012679379,"about_ca_topic_score_gemma":0.0034150882,"teacher_disagreement_score":0.20680718,"about_ca_system_score_codex":0.00006616483,"about_ca_system_score_gemma":0.000058893114,"threshold_uncertainty_score":0.9938953},"labels":[],"label_agreement":null},{"id":"W614198713","doi":"10.1155/2015/732464","title":"Parents’ and Adolescents’ Willingness to be Vaccinated Against Serogroup B Meningococcal Disease during a Mass Vaccination in Saguenay–Lac‐St‐Jean (Quebec)","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Children's Hospital; University of British Columbia; Ministère de la Santé et des Services Sociaux (Québec); Cégep de Chicoutimi; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Université Laval; Institut National de Santé Publique du Québec; Centre hospitalier universitaire de Québec","funders":"","keywords":"Meningococcal disease; Mass vaccination; Vaccination; Medicine; Virology; Demography; Pediatrics; Neisseria meningitidis; Sociology; Biology","score_opus":0.008644667080072508,"score_gpt":0.2239880423653373,"score_spread":0.2153433752852648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W614198713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931718,0.0030700907,0.00006251338,0.0020009622,0.0013123889,0.00023901308,0.00010566704,0.000022303575,0.000015272215],"genre_scores_gemma":[0.99889314,0.00025850168,0.00000392697,0.00052077364,0.00014286743,0.000010954909,0.000099511584,0.000020633239,0.000049692],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983658,0.00027083038,0.0005332849,0.00029364182,0.00002672212,0.0005097108],"domain_scores_gemma":[0.9981498,0.000061916966,0.0001814364,0.00012519734,0.00022207043,0.00125959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027883291,0.00024360904,0.0004546874,0.00046332998,0.000200255,0.00005371026,0.00015485009,0.00029144902,0.0001989211],"category_scores_gemma":[0.0007548312,0.00021186758,0.00008188326,0.00024013338,0.00011628414,0.00015523407,0.000055918277,0.00038802484,0.0000081784765],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005125397,0.00018212797,0.9667396,0.000095910946,0.00014278996,0.00019419825,0.0003861746,0.00003979414,0.02144307,0.00006140956,0.0014071285,0.008795285],"study_design_scores_gemma":[0.008123278,0.0005344504,0.96691287,0.0004892309,0.00014426743,0.0008768732,0.00046551856,0.000015800102,0.00037220982,0.00011765883,0.021492006,0.00045582964],"about_ca_topic_score_codex":0.011283132,"about_ca_topic_score_gemma":0.06923169,"teacher_disagreement_score":0.057948556,"about_ca_system_score_codex":0.0002571299,"about_ca_system_score_gemma":0.00068266306,"threshold_uncertainty_score":0.9953008},"labels":[],"label_agreement":null},{"id":"W6886033236","doi":"10.14288/1.0228093","title":"Parents’ and adolescents’ willingness to be vaccinated against serogroup B meningococcal disease during a mass vaccination in Saguenay–Lac-St-Jean (Quebec)","year":2016,"lang":"en","type":"article","venue":"Open Collections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; Meningococcal disease; Mass vaccination; Receipt; Meningitis; Telephone survey; Disease","score_opus":0.013684624919857807,"score_gpt":0.24628147101049816,"score_spread":0.23259684609064035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6886033236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948764,0.00006831001,0.0002822753,0.0018890117,0.00071486004,0.0010938409,0.00011527804,0.00009638457,0.00086367165],"genre_scores_gemma":[0.96474063,0.00008900538,0.000024218452,0.00007439403,0.00004321171,0.00029659344,0.000064042,0.000027347714,0.034640577],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986128,0.00018728245,0.00033896,0.0004666555,0.000022589014,0.00037167035],"domain_scores_gemma":[0.99937963,0.00006268612,0.00009075509,0.00025604494,0.000109730514,0.00010113495],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00015376143,0.00021643071,0.00026923325,0.0001978816,0.0013512546,0.00034518726,0.0002262756,0.00014858629,0.00078098616],"category_scores_gemma":[0.00013003046,0.00017727903,0.000051923413,0.0007879882,0.000020639862,0.00042457378,0.00023794355,0.00015027294,0.000034624005],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003412132,0.0014634187,0.266066,0.00011538074,0.00032563257,0.000019127443,0.00060927623,0.00012607552,0.6799982,0.00014950814,0.031987168,0.015728055],"study_design_scores_gemma":[0.009962967,0.00021622858,0.9225407,0.00051384553,0.000086035834,0.000024330877,0.00036981894,0.000036902642,0.015971705,0.00016044492,0.049394708,0.0007223004],"about_ca_topic_score_codex":0.01088949,"about_ca_topic_score_gemma":0.03280689,"teacher_disagreement_score":0.6640265,"about_ca_system_score_codex":0.00021233283,"about_ca_system_score_gemma":0.00006247979,"threshold_uncertainty_score":0.99994886},"labels":[],"label_agreement":null},{"id":"W6886057764","doi":"10.14288/1.0228049","title":"The Impact of the Meningococcal Serogroup C Conjugate Vaccine in Canada Between 2002 and 2012","year":2016,"lang":"en","type":"article","venue":"Open Collections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Incidence (geometry); Meningococcal disease; Conjugate vaccine; Population; Vaccination; Immunization","score_opus":0.012739265038217507,"score_gpt":0.25197161552451497,"score_spread":0.23923235048629746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6886057764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919988,0.00020038635,0.0000057021707,0.00087593065,0.00045656937,0.00041952633,0.00013945192,0.0000050822396,0.005898569],"genre_scores_gemma":[0.9497399,0.00007245707,0.0000020176071,0.000006267395,0.00002070501,0.000039243296,0.0000018555925,0.0000051145153,0.05011245],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99940157,0.00013625357,0.00018373945,0.00010171341,0.000007719904,0.00016897469],"domain_scores_gemma":[0.99943143,0.0002616223,0.000074743664,0.0001755112,0.00004231932,0.000014396227],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013783631,0.0000765792,0.00015072171,0.000018822668,0.0010625077,0.000060353374,0.00018746876,0.000050695544,0.0011868223],"category_scores_gemma":[0.00004073255,0.00003253595,0.000034904937,0.00030447647,0.000041134605,0.00009737275,0.00015133427,0.0000917925,0.0000046981604],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018902661,0.000058927595,0.26255348,0.000002109649,0.00039944984,2.0271214e-7,0.00006225248,0.0000054543116,0.08783343,0.000089546105,0.64388746,0.004918638],"study_design_scores_gemma":[0.002231817,0.00016009652,0.8661445,0.000033984255,0.000034041917,0.000035449757,0.00010197736,0.0000014915565,0.0077969204,0.00018416916,0.12315855,0.00011703379],"about_ca_topic_score_codex":0.93627644,"about_ca_topic_score_gemma":0.95633286,"teacher_disagreement_score":0.60359097,"about_ca_system_score_codex":0.0001322187,"about_ca_system_score_gemma":0.00038804728,"threshold_uncertainty_score":0.99972624},"labels":[],"label_agreement":null},{"id":"W6901868231","doi":"10.60692/rpcxe-cdn31","title":"Socioepidemiological macro-determinants associated with the cumulative incidence of bacterial meningitis: A focus on the African Meningitis Belt","year":2023,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut Universitaire de Gériatrie de Montréal","funders":"","keywords":"Incidence (geometry); Cumulative incidence; Meningitis; Logistic regression; Epidemiology; Public health; Multivariate statistics","score_opus":0.045794109333272055,"score_gpt":0.2466937941630464,"score_spread":0.20089968482977436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901868231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974031,0.0000027456435,0.00010911645,0.00036554565,0.0004311271,0.0004366405,0.00028408153,0.00017670718,0.0007909241],"genre_scores_gemma":[0.9994849,3.6949723e-7,0.0000034562108,0.00004206735,0.00004168831,0.00014733187,0.0000748798,0.000008796754,0.00019653518],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.99839675,0.00053203636,0.0005587187,0.00014420817,0.0000565235,0.00031178104],"domain_scores_gemma":[0.9985696,0.0003213237,0.00064515043,0.00027138012,0.00017509729,0.00001746375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010037635,0.00019347656,0.00035860733,0.00011881386,0.0004913417,0.000057130987,0.00023455426,0.00019978802,0.00010609741],"category_scores_gemma":[0.00020594845,0.00009066727,0.00009432629,0.00036646693,0.00016746036,0.00022051955,0.00009821315,0.00019129847,0.00040262233],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004716725,0.00007115371,0.3799914,0.00031455554,0.00382577,0.00002567336,0.5606224,0.0005762029,0.0133652985,0.00994287,0.020615581,0.0059323604],"study_design_scores_gemma":[0.0042749983,0.001649937,0.9040801,0.0009407933,0.00025038695,0.00018501769,0.05417854,0.00057857734,0.031417515,0.00004646106,0.0016536255,0.00074403314],"about_ca_topic_score_codex":0.000059003523,"about_ca_topic_score_gemma":0.000005186383,"teacher_disagreement_score":0.5240887,"about_ca_system_score_codex":0.00006694192,"about_ca_system_score_gemma":0.000031375374,"threshold_uncertainty_score":0.51750296},"labels":[],"label_agreement":null},{"id":"W6901918562","doi":"10.6084/m9.figshare.22978174.v1","title":"Additional file 2 of Detoxified synthetic bacterial membrane vesicles as a vaccine platform against bacteria and SARS-CoV-2","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bacteria; RNA; DNA; Vesicle; Membrane; Hierarchical clustering; Bacterial outer membrane; Escherichia coli","score_opus":0.03172338731023768,"score_gpt":0.2491975732752359,"score_spread":0.2174741859649982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901918562","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26460817,0.000018606534,7.670635e-9,0.00002718718,0.00016023255,0.00011879888,0.7342661,0.000101113175,0.0006997695],"genre_scores_gemma":[0.07377895,0.000009115487,0.000016121405,0.00004458588,0.00015239649,0.00035564508,0.92494076,0.000022640927,0.0006797794],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991886,0.00003971118,0.00026391275,0.00024077446,0.00001866492,0.00024831845],"domain_scores_gemma":[0.9988256,0.00074856594,0.00013989677,0.00018696365,0.00008002851,0.000018941306],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000027134874,0.0001723722,0.0002723486,0.00013826751,0.00014089028,0.000029299834,0.0001178919,0.00018597204,0.98308676],"category_scores_gemma":[0.00094201596,0.00015616596,0.00007834156,0.000174561,0.000015413925,0.00014775484,0.00013306124,0.00011874207,0.012860913],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063194784,0.000015723163,4.1803858e-7,0.000034929057,0.000041480955,0.0000015186714,0.00001880426,7.1275615e-8,0.44012824,0.000003755083,0.5581748,0.0015170665],"study_design_scores_gemma":[0.00047152623,0.0000757084,0.003016324,0.00053354085,0.000008987745,0.00005000335,0.000020762067,0.0000031326533,0.24392441,0.000021148458,0.751735,0.00013949761],"about_ca_topic_score_codex":0.000014640132,"about_ca_topic_score_gemma":0.00003493932,"teacher_disagreement_score":0.9702259,"about_ca_system_score_codex":0.000012182027,"about_ca_system_score_gemma":0.000060001505,"threshold_uncertainty_score":0.9879077},"labels":[],"label_agreement":null},{"id":"W6901925157","doi":"10.6084/m9.figshare.15041182.v1","title":"Additional file 1 of Seasonal modulation of antibody response to diphtheria-tetanus-pertussis vaccination in infants: a cohort study in rural Gambia","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Thomas Hospital","funders":"","keywords":"Tetanus; Vaccination; Pregnancy; Cohort study; Cohort; Antibody response; Whooping cough; Antibody","score_opus":0.014478204471115839,"score_gpt":0.27494493365928935,"score_spread":0.2604667291881735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901925157","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49130526,0.000015993928,8.6591484e-8,0.00001315637,0.000031862473,0.00017499141,0.5083939,0.000005858868,0.000058891364],"genre_scores_gemma":[0.55606234,4.2374583e-7,0.000014731014,0.0000066530574,0.000010387019,0.00026066037,0.44345972,0.000004889064,0.0001801885],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9990775,0.0002908155,0.00031295154,0.00016655911,0.00002981041,0.00012238749],"domain_scores_gemma":[0.99884284,0.0006671421,0.000114056405,0.00014949995,0.00021489455,0.000011585974],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008265357,0.00009234614,0.00023238576,0.0001769959,0.000028664139,0.000007603068,0.0000676068,0.000111944246,0.9672629],"category_scores_gemma":[0.0030067873,0.0000937233,0.000046616922,0.00044468514,0.0000032467904,0.00011603509,0.000065992754,0.0000922069,0.00027826105],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00097363285,0.00095266016,0.04538128,0.000036455196,0.00008437875,0.0000061191226,0.0003138921,0.000040166553,0.15408686,8.1197294e-7,0.7947569,0.0033668464],"study_design_scores_gemma":[0.0006999082,0.00014935854,0.9721796,0.000635481,0.0000044190465,0.0000097424045,0.0001571199,0.000029571136,0.0020727746,0.0000045005645,0.023966419,0.00009111653],"about_ca_topic_score_codex":0.00007842023,"about_ca_topic_score_gemma":0.00043704995,"teacher_disagreement_score":0.9669847,"about_ca_system_score_codex":0.000044705062,"about_ca_system_score_gemma":0.00011163359,"threshold_uncertainty_score":0.38219252},"labels":[],"label_agreement":null},{"id":"W6902247477","doi":"10.6084/m9.figshare.22978174","title":"Additional file 2 of Detoxified synthetic bacterial membrane vesicles as a vaccine platform against bacteria and SARS-CoV-2","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bacteria; RNA; DNA; Vesicle; Membrane; Hierarchical clustering; Bacterial outer membrane; Escherichia coli","score_opus":0.03172338731023768,"score_gpt":0.2491975732752359,"score_spread":0.2174741859649982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902247477","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26460817,0.000018606534,7.670635e-9,0.00002718718,0.00016023255,0.00011879888,0.7342661,0.000101113175,0.0006997695],"genre_scores_gemma":[0.07377895,0.000009115487,0.000016121405,0.00004458588,0.00015239649,0.00035564508,0.92494076,0.000022640927,0.0006797794],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991886,0.00003971118,0.00026391275,0.00024077446,0.00001866492,0.00024831845],"domain_scores_gemma":[0.9988256,0.00074856594,0.00013989677,0.00018696365,0.00008002851,0.000018941306],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000027134874,0.0001723722,0.0002723486,0.00013826751,0.00014089028,0.000029299834,0.0001178919,0.00018597204,0.98308676],"category_scores_gemma":[0.00094201596,0.00015616596,0.00007834156,0.000174561,0.000015413925,0.00014775484,0.00013306124,0.00011874207,0.012860913],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063194784,0.000015723163,4.1803858e-7,0.000034929057,0.000041480955,0.0000015186714,0.00001880426,7.1275615e-8,0.44012824,0.000003755083,0.5581748,0.0015170665],"study_design_scores_gemma":[0.00047152623,0.0000757084,0.003016324,0.00053354085,0.000008987745,0.00005000335,0.000020762067,0.0000031326533,0.24392441,0.000021148458,0.751735,0.00013949761],"about_ca_topic_score_codex":0.000014640132,"about_ca_topic_score_gemma":0.00003493932,"teacher_disagreement_score":0.9702259,"about_ca_system_score_codex":0.000012182027,"about_ca_system_score_gemma":0.000060001505,"threshold_uncertainty_score":0.9879077},"labels":[],"label_agreement":null},{"id":"W6902315234","doi":"10.6084/m9.figshare.24070089.v1","title":"Additional file 1 of Impact of national recommendations for routine pertussis vaccination during pregnancy on infant pertussis in Ontario, Canada: a population-based time-series study","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; Institute for Clinical Evaluative Sciences; Public Health Ontario; University of Toronto","funders":"","keywords":"Pregnancy; Pertussis vaccine; Vaccination; MEDLINE; Whooping cough; Population","score_opus":0.026613408986426938,"score_gpt":0.2667146699532953,"score_spread":0.24010126096686835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902315234","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08874024,0.000004420267,3.6146695e-8,0.0000736257,0.000042484804,0.0003723425,0.91063136,0.000020377602,0.00011510339],"genre_scores_gemma":[0.40056285,1.2225952e-7,0.000012696055,0.000003320802,0.000009377999,0.0008625234,0.5975081,0.000006442464,0.0010346038],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9993328,0.00005018109,0.00030078148,0.00015071403,0.00003514926,0.00013036963],"domain_scores_gemma":[0.9985521,0.0009129068,0.00019095531,0.00009289215,0.00024025564,0.000010934257],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000024129047,0.000105209656,0.0001855457,0.00023778559,0.00012295679,0.000006264206,0.00006570268,0.00007230539,0.96089894],"category_scores_gemma":[0.0014570905,0.00009415564,0.00008467229,0.00025699497,0.0000020345356,0.000101319834,0.000023406104,0.00008132242,0.00006855222],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009810371,0.0002027567,0.005954445,0.000030039519,0.0000797729,2.6947788e-7,0.00009346753,0.00023548958,0.00024030056,0.0000018237895,0.99281454,0.00024898988],"study_design_scores_gemma":[0.00074258813,0.0002418094,0.9824849,0.0008211307,0.000005772138,0.0000016880641,0.000042375133,0.000061832354,0.00024873478,0.0000062310373,0.015248317,0.00009466655],"about_ca_topic_score_codex":0.2129624,"about_ca_topic_score_gemma":0.74555254,"teacher_disagreement_score":0.97756624,"about_ca_system_score_codex":0.00035012446,"about_ca_system_score_gemma":0.00082689384,"threshold_uncertainty_score":0.7922785},"labels":[],"label_agreement":null},{"id":"W6902414411","doi":"10.6084/m9.figshare.27750148","title":"Additional file 1 of Probiotic bacteria-released extracellular vesicles enhance macrophage phagocytosis in polymicrobial sepsis by activating the FPR1/2 pathway","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"","keywords":"Probiotic; Macrophage; Phagocytosis; Extracellular vesicles; Extracellular; Sepsis; Inflammation","score_opus":0.0117907335295169,"score_gpt":0.22221933460746612,"score_spread":0.21042860107794922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902414411","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036015753,0.0013053875,4.8600657e-7,0.00006397137,0.00017023984,0.00022229658,0.9619731,0.00006913998,0.00017963235],"genre_scores_gemma":[0.2968622,0.0000035619262,0.00002709721,0.000027556538,0.00008830645,0.00046103273,0.6998977,0.000023893477,0.0026086508],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990086,0.00012725631,0.00030037586,0.0002824025,0.000019718416,0.00026162426],"domain_scores_gemma":[0.9985594,0.0010776013,0.00011689871,0.00018278127,0.00004820155,0.000015083148],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000036982212,0.00017842086,0.00019913194,0.00008092499,0.00013752982,0.00005541331,0.00018010556,0.00019812825,0.98419195],"category_scores_gemma":[0.00051013957,0.000137239,0.000113903734,0.000285534,0.000026978265,0.00015783384,0.00007750694,0.00028337003,0.0024418563],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012421944,0.000043009648,4.1308505e-7,0.000058643716,0.000030403959,0.0000014530523,0.00004013889,2.741936e-7,0.4836841,0.0000014626243,0.51255524,0.0035724402],"study_design_scores_gemma":[0.00010476563,0.000031942738,0.00029744869,0.0012523218,0.0000041299086,0.00001357192,0.000022826378,0.000005804935,0.44620568,0.0000027357974,0.5519613,0.00009745553],"about_ca_topic_score_codex":0.00004362306,"about_ca_topic_score_gemma":0.000018760393,"teacher_disagreement_score":0.9817501,"about_ca_system_score_codex":0.000042505093,"about_ca_system_score_gemma":0.00011347485,"threshold_uncertainty_score":0.9983349},"labels":[],"label_agreement":null},{"id":"W6902490683","doi":"10.6084/m9.figshare.c.3794827_d1","title":"Additional file 1: Table S1. of Epidemiology of pertussis in Alberta, Canada 2004â 2015","year":2017,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Epidemiology; Whooping cough; Pertussis vaccine; Bordetella pertussis","score_opus":0.033020943265757254,"score_gpt":0.26452140104965094,"score_spread":0.2315004577838937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902490683","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014732021,0.00017860501,2.3515911e-8,0.00017616579,0.00014321192,0.000060284237,0.994995,0.0000031486572,0.002970349],"genre_scores_gemma":[0.07473043,0.0000035427506,0.000022616296,0.000052942854,0.00004000625,0.00014864875,0.91702646,0.0000065427303,0.007968839],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993714,0.00006474151,0.00025146073,0.0001276566,0.0000075515422,0.00017719704],"domain_scores_gemma":[0.9979091,0.0014198506,0.00028864032,0.0002721839,0.00009632872,0.000013861539],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000030114532,0.00007843191,0.00027231098,0.000038138525,0.00009608736,0.0000017922574,0.00018245981,0.00014812294,0.9920825],"category_scores_gemma":[0.007461949,0.00006872329,0.000042405558,0.000032999124,0.000021837383,0.00006831241,0.0000774808,0.000099803314,0.00076994946],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001334221,0.000027903976,0.0009466156,0.000023124852,0.000026694428,3.715811e-7,0.000005486804,0.0000025105526,0.00027537372,0.00001535556,0.99832934,0.00033389],"study_design_scores_gemma":[0.0001976194,0.00002782617,0.102652796,0.00035810005,0.0000028695329,0.000008112225,0.0000068870854,0.0000032225282,0.0008496473,0.000020129784,0.8958102,0.00006258023],"about_ca_topic_score_codex":0.5406843,"about_ca_topic_score_gemma":0.72337544,"teacher_disagreement_score":0.9913125,"about_ca_system_score_codex":0.000025568774,"about_ca_system_score_gemma":0.00033448223,"threshold_uncertainty_score":0.98963994},"labels":[],"label_agreement":null},{"id":"W6920688927","doi":"10.6084/m9.figshare.20064469","title":"Additional file 3 of Do intentions lead to action? Results of a longitudinal study assessing determinants of Tdap vaccine uptake during pregnancy in Quebec, Canada","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Université de Sherbrooke; Université Laval; Institut National de Santé Publique du Québec","funders":"","keywords":"Pregnancy; Longitudinal study; Vaccination; Univariate; Lead (geology); Longitudinal data","score_opus":0.04910232013174101,"score_gpt":0.2946425451985484,"score_spread":0.24554022506680737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920688927","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35443097,0.00003726792,2.6430495e-8,0.0000072625658,0.000089360365,0.00016380496,0.6451851,0.0000052662563,0.00008093189],"genre_scores_gemma":[0.81284153,3.5632846e-7,0.000009408277,0.0000013302888,0.000010759432,0.0004743583,0.1855038,0.0000065711597,0.0011518815],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9990858,0.00009054984,0.00046281703,0.00018247613,0.00004045992,0.00013792458],"domain_scores_gemma":[0.9990736,0.0002721956,0.0003007293,0.00017388749,0.00016788348,0.0000116875735],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00002417245,0.00009217504,0.00024545065,0.00016870697,0.00013061495,0.000005741736,0.00012820645,0.000040250303,0.85198784],"category_scores_gemma":[0.0008417831,0.00009527547,0.000050480587,0.0003112598,0.000003975363,0.000101548605,0.000172547,0.00014588145,0.000015031589],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016920788,0.0005545703,0.0027071973,0.00011045067,0.0000666697,0.000008630805,0.00014226542,0.00003260077,0.0105810175,3.44361e-7,0.98384255,0.0017845086],"study_design_scores_gemma":[0.0010817989,0.0002064304,0.942205,0.0024718042,0.000012733942,0.000028104952,0.0012778147,0.0000017122392,0.004594148,0.0000010407721,0.048010137,0.00010928589],"about_ca_topic_score_codex":0.10333743,"about_ca_topic_score_gemma":0.83464104,"teacher_disagreement_score":0.93949777,"about_ca_system_score_codex":0.000092718416,"about_ca_system_score_gemma":0.00031349057,"threshold_uncertainty_score":0.90263355},"labels":[],"label_agreement":null},{"id":"W6920905089","doi":"10.6084/m9.figshare.13269842","title":"Additional file 1 of Revisiting the epidemiology of pertussis in Canada, 1924–2015: a literature review, evidence synthesis, and modeling study","year":2020,"lang":"en","type":"article","venue":"Open MIND","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"York University","funders":"","keywords":"Incidence (geometry); Table (database); Epidemiology; Bootstrapping (finance); Age groups; Distribution (mathematics)","score_opus":0.07004113179258155,"score_gpt":0.31772659466670927,"score_spread":0.24768546287412774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920905089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63872075,0.12973903,0.00000911239,0.015197558,0.00018718163,0.0021112077,0.21343558,0.0000025541933,0.00059704034],"genre_scores_gemma":[0.9927968,0.003120109,0.0006055841,0.00042262883,0.00007479128,0.0002418917,0.0025824795,0.000008574848,0.00014714443],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99880505,0.0004985673,0.0004013902,0.00018235759,0.000010700848,0.000101951795],"domain_scores_gemma":[0.99613816,0.0034639626,0.00018416747,0.00012948057,0.000071426686,0.000012795725],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039743359,0.00007855257,0.00039043053,0.00001881678,0.000056797366,0.000004501517,0.00018763913,0.0000473883,0.24046151],"category_scores_gemma":[0.005560672,0.000051221246,0.000028401255,0.00014420915,0.00002792954,0.00008673911,0.00014506125,0.00014713843,0.000010791988],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024458818,0.00008911523,0.011126263,0.00047762878,0.00025064155,0.000006218093,0.0012383654,0.00006227354,0.0046713045,0.000009062656,0.88807243,0.09375211],"study_design_scores_gemma":[0.0011966407,0.0006709455,0.09612849,0.06067685,0.00047135045,0.00024291228,0.0058181453,0.0023314639,0.0012520461,0.000028207673,0.83041453,0.0007683833],"about_ca_topic_score_codex":0.05013247,"about_ca_topic_score_gemma":0.054814335,"teacher_disagreement_score":0.35407606,"about_ca_system_score_codex":0.000015777741,"about_ca_system_score_gemma":0.00021962119,"threshold_uncertainty_score":0.96243286},"labels":[],"label_agreement":null},{"id":"W6920956864","doi":"10.6084/m9.figshare.20064469.v1","title":"Additional file 3 of Do intentions lead to action? Results of a longitudinal study assessing determinants of Tdap vaccine uptake during pregnancy in Quebec, Canada","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Université de Sherbrooke; Université Laval; Institut National de Santé Publique du Québec","funders":"","keywords":"Pregnancy; Longitudinal study; Vaccination; Univariate; Lead (geology); Longitudinal data","score_opus":0.04910232013174101,"score_gpt":0.2946425451985484,"score_spread":0.24554022506680737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920956864","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35443097,0.00003726792,2.6430495e-8,0.0000072625658,0.000089360365,0.00016380496,0.6451851,0.0000052662563,0.00008093189],"genre_scores_gemma":[0.81284153,3.5632846e-7,0.000009408277,0.0000013302888,0.000010759432,0.0004743583,0.1855038,0.0000065711597,0.0011518815],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9990858,0.00009054984,0.00046281703,0.00018247613,0.00004045992,0.00013792458],"domain_scores_gemma":[0.9990736,0.0002721956,0.0003007293,0.00017388749,0.00016788348,0.0000116875735],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00002417245,0.00009217504,0.00024545065,0.00016870697,0.00013061495,0.000005741736,0.00012820645,0.000040250303,0.85198784],"category_scores_gemma":[0.0008417831,0.00009527547,0.000050480587,0.0003112598,0.000003975363,0.000101548605,0.000172547,0.00014588145,0.000015031589],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016920788,0.0005545703,0.0027071973,0.00011045067,0.0000666697,0.000008630805,0.00014226542,0.00003260077,0.0105810175,3.44361e-7,0.98384255,0.0017845086],"study_design_scores_gemma":[0.0010817989,0.0002064304,0.942205,0.0024718042,0.000012733942,0.000028104952,0.0012778147,0.0000017122392,0.004594148,0.0000010407721,0.048010137,0.00010928589],"about_ca_topic_score_codex":0.10333743,"about_ca_topic_score_gemma":0.83464104,"teacher_disagreement_score":0.93949777,"about_ca_system_score_codex":0.000092718416,"about_ca_system_score_gemma":0.00031349057,"threshold_uncertainty_score":0.90263355},"labels":[],"label_agreement":null},{"id":"W6921015804","doi":"10.6084/m9.figshare.28043019","title":"Pertactin deficiency of <i>Bordetella pertussis</i>: Insights into epidemiology, and perspectives on surveillance and public health impact","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pertactin; Pertussis vaccine; Whooping cough; Bordetella pertussis; Public health; Vaccination; MEDLINE","score_opus":0.06381759842169192,"score_gpt":0.32588655185597387,"score_spread":0.26206895343428194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6921015804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8460005,0.13966356,0.0000018533219,0.0017727189,0.00022432624,0.00019508053,0.011579698,0.00009521394,0.00046702163],"genre_scores_gemma":[0.9946822,0.0012158091,0.000009113746,0.00007371544,0.000039287417,0.000021705124,0.003879406,0.000012179364,0.00006656807],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988643,0.00029589864,0.00023048818,0.00034015364,0.000009884581,0.00025926164],"domain_scores_gemma":[0.9988469,0.0007983362,0.00008516142,0.0001537874,0.000069237765,0.00004657957],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017099823,0.00015512014,0.0003311086,0.00015496253,0.00018011221,0.000027590142,0.000067893474,0.00015092675,0.009668532],"category_scores_gemma":[0.0013418667,0.000107196734,0.00006642835,0.00017091681,0.00004971458,0.00010274648,0.00006518139,0.00020672673,0.00011944068],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004023279,0.0011442513,0.05136515,0.003217705,0.0011691061,0.000010213076,0.048862226,0.000011756738,0.12106471,0.0099970065,0.50102425,0.26173133],"study_design_scores_gemma":[0.0008245464,0.0023659992,0.48568702,0.0013164212,0.000014047461,0.0002526597,0.0033919187,0.000085216474,0.0013550406,0.00035316462,0.5037852,0.00056874397],"about_ca_topic_score_codex":0.00032193106,"about_ca_topic_score_gemma":0.00012189944,"teacher_disagreement_score":0.43432188,"about_ca_system_score_codex":0.00003941223,"about_ca_system_score_gemma":0.00011373399,"threshold_uncertainty_score":0.99123675},"labels":[],"label_agreement":null},{"id":"W6921043921","doi":"10.6084/m9.figshare.c.3825379_d1","title":"Additional file 1: Table S1. of How well do ICD-9 physician claim diagnostic codes identify confirmed pertussis cases in Alberta, Canada? A Canadian Immunization Research Network (CIRN) Study","year":2017,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Immunization; Diagnosis code; Pertussis vaccine; MEDLINE","score_opus":0.03907385791760786,"score_gpt":0.2917761595308481,"score_spread":0.25270230161324025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6921043921","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035853025,0.00014372052,1.777898e-8,0.00024161352,0.00023984503,0.00051187474,0.9607999,0.000008935037,0.0022011213],"genre_scores_gemma":[0.61536896,0.0000040131845,0.0000010730113,0.000026329133,0.000087848755,0.00043825823,0.38207886,0.000011901844,0.001982732],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99869055,0.0002722133,0.00020576063,0.00026001653,0.00004711782,0.00052434386],"domain_scores_gemma":[0.9955354,0.0033846793,0.00017459254,0.00046702346,0.000384072,0.00005424036],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000085435495,0.00014911672,0.0002720366,0.00013706519,0.0011344816,0.00013857512,0.00036341764,0.00016059312,0.87365675],"category_scores_gemma":[0.0069870595,0.00014719492,0.000039325518,0.00021903992,0.000040901938,0.00019890963,0.00013975344,0.0002957882,0.00084919855],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016781512,0.000098720084,0.0025760548,0.000021627338,0.00006920454,0.00001749945,0.00006377266,0.0000140169695,0.00008460755,0.000009464991,0.99668723,0.0003410391],"study_design_scores_gemma":[0.00036542595,0.00009779848,0.33825532,0.0007731826,0.000010073159,0.000010742012,0.0004069326,0.000007037608,0.00014729882,0.000009491069,0.65977544,0.00014123821],"about_ca_topic_score_codex":0.9658012,"about_ca_topic_score_gemma":0.99839044,"teacher_disagreement_score":0.87280756,"about_ca_system_score_codex":0.00016471664,"about_ca_system_score_gemma":0.0013106494,"threshold_uncertainty_score":0.9999288},"labels":[],"label_agreement":null},{"id":"W6921093585","doi":"10.6084/m9.figshare.7453835","title":"Additional file 2: of Impact of vaccine delays at the 2, 4, 6 and 12 month visits on incomplete vaccination status by 24 months of age in Quebec, Canada","year":2018,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; MEDLINE; Vaccine safety; Immunization; Population","score_opus":0.012533796591495373,"score_gpt":0.23026733383823672,"score_spread":0.21773353724674135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6921093585","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19258752,0.00013422003,2.794713e-8,0.00001598435,0.000033443153,0.000113150396,0.8067602,0.0000032615555,0.00035221086],"genre_scores_gemma":[0.526185,0.0000029971568,0.0000018893585,0.000011309779,0.000014796966,0.00004436996,0.47299922,0.0000049585637,0.0007354809],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9994656,0.000058654594,0.00021494119,0.00010910197,0.000020020629,0.00013169342],"domain_scores_gemma":[0.9989939,0.0005475721,0.00019641327,0.00012998775,0.00011867601,0.000013460005],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00001708648,0.000092729366,0.00018287895,0.0000551863,0.00005648455,0.0000031708785,0.00006803489,0.000081289894,0.92386556],"category_scores_gemma":[0.00038667457,0.00006543262,0.000037754686,0.00009278699,0.0000078205985,0.000052190026,0.000061617284,0.00007370986,0.00003421042],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012507437,0.000042035696,0.00024626844,0.000018882038,0.000047136175,2.9822317e-7,0.00004897888,0.000004300723,0.010437467,0.0000011960957,0.98799604,0.0010323148],"study_design_scores_gemma":[0.00067990075,0.00037388675,0.5720434,0.00035552605,0.0000067371575,0.000003820451,0.000026941565,0.000011856199,0.00965673,0.000005465535,0.41674992,0.00008579445],"about_ca_topic_score_codex":0.29081228,"about_ca_topic_score_gemma":0.9088843,"teacher_disagreement_score":0.92383134,"about_ca_system_score_codex":0.000087994384,"about_ca_system_score_gemma":0.00013942226,"threshold_uncertainty_score":0.7139103},"labels":[],"label_agreement":null},{"id":"W6921242827","doi":"10.6084/m9.figshare.27019263.v1","title":"Additional file 1 of Programming Bordetella pertussis lipid A to promote adjuvanticity","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bordetella pertussis; Whooping cough; Pertactin; Immune system; Pertussis vaccine","score_opus":0.020266207825914446,"score_gpt":0.2515465840525239,"score_spread":0.23128037622660944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6921242827","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004661054,0.0001387347,4.1454635e-7,0.00006289992,0.00013682195,0.00017562773,0.9974999,0.0001168963,0.0014026079],"genre_scores_gemma":[0.00811127,6.8712455e-7,0.00027369903,0.000029873572,0.0001510407,0.0008385809,0.9866546,0.000014268476,0.003925986],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994869,0.000022253418,0.00013813101,0.00017886347,0.000011739492,0.00016207357],"domain_scores_gemma":[0.9994343,0.00032454805,0.000030151401,0.000108228625,0.00008403845,0.000018765353],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000013044068,0.00009229777,0.00012600998,0.00008100596,0.00006959186,0.00002865051,0.00008049555,0.00010946792,0.99758416],"category_scores_gemma":[0.0010036115,0.00007713319,0.00008548643,0.0002034809,0.0000061405576,0.000059824953,0.0000704523,0.00011012954,0.014016928],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000766517,0.00003427173,4.5960343e-7,0.00008385101,0.000042829564,9.888955e-7,0.00004316703,1.823404e-7,0.005253841,0.000004675043,0.9341404,0.060387656],"study_design_scores_gemma":[0.000047821497,0.00011009111,0.00048467345,0.0019959647,0.0000068537465,0.000029177902,0.000009618826,0.0000058190026,0.0037941204,0.0000043900714,0.99341923,0.00009225466],"about_ca_topic_score_codex":0.000008896994,"about_ca_topic_score_gemma":0.0000139407575,"teacher_disagreement_score":0.98356724,"about_ca_system_score_codex":0.000012300245,"about_ca_system_score_gemma":0.000064424385,"threshold_uncertainty_score":0.9867508},"labels":[],"label_agreement":null},{"id":"W6923602553","doi":"10.14288/1.0441411","title":"Evaluation of anti-pertussis immunogenicity in infants and children after immunization in pregnancy with tetanus-diphtheria-acellular pertussis vaccine","year":2025,"lang":"en","type":"article","venue":"cIRcle (University of British Columbia)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunogenicity; Immunization; Pregnancy; Pertussis vaccine; Vaccination; Diphtheria; Whooping cough","score_opus":0.005415695587217837,"score_gpt":0.18404540576846556,"score_spread":0.17862971018124774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6923602553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99454087,0.0047072824,0.00003475691,0.000034028126,0.00008637712,0.00041347014,0.00006133456,0.000013335656,0.00010854469],"genre_scores_gemma":[0.9991021,0.00068329653,0.000034577497,0.0000042942006,0.0000023565983,0.0000031480909,0.000053209493,0.000006572054,0.00011044586],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991394,0.0002402552,0.00018939826,0.00024823143,0.00003812681,0.00014456031],"domain_scores_gemma":[0.99941427,0.000025999534,0.00011668543,0.0002098631,0.00022350301,0.000009669006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031489672,0.000055785382,0.0003115801,0.00014859848,0.00008588896,0.000018012393,0.0001143825,0.00016525255,0.000257156],"category_scores_gemma":[0.00004141983,0.00012806068,0.000041306794,0.00046570363,0.000095827,0.0002269381,0.00008845502,0.00010970802,0.0000015597743],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011005458,0.00023567297,0.7922026,0.000030943225,0.00015633863,0.0000024140888,0.00021924078,0.000013159084,0.044685412,6.0494693e-7,0.000015963842,0.16232757],"study_design_scores_gemma":[0.004310196,0.00008713546,0.9940297,0.00066954456,0.00015736616,0.000028768143,0.00029025285,0.000048063845,0.00021536367,0.000031313568,0.000013360455,0.00011894142],"about_ca_topic_score_codex":0.085679136,"about_ca_topic_score_gemma":0.20329247,"teacher_disagreement_score":0.20182708,"about_ca_system_score_codex":0.000059367558,"about_ca_system_score_gemma":0.000092429866,"threshold_uncertainty_score":0.9204094},"labels":[],"label_agreement":null},{"id":"W6925371556","doi":"10.17632/y5tvcz87x9.1","title":"Microbiota protect against frailty, loss of skeletal muscle, and maintain inflammatory tone during aging in mice","year":2025,"lang":"en","type":"dataset","venue":"Mendeley Data","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Inflammation; Skeletal muscle; Tumor necrosis factor alpha; Inflammatory response; Proinflammatory cytokine; Systemic inflammation; Immune system","score_opus":0.015651796279080733,"score_gpt":0.2765238309481698,"score_spread":0.26087203466908904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6925371556","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23414256,0.0012206514,0.0000044989656,0.000074564174,0.0005550355,0.000460621,0.76349944,0.000024723346,0.00001791779],"genre_scores_gemma":[0.0111587,0.0014769408,0.000045784785,0.000032348096,0.00008373876,0.000036543766,0.98694825,0.000015530304,0.00020218204],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979109,0.0002657763,0.0006616374,0.00072062324,0.000022947603,0.0004180787],"domain_scores_gemma":[0.9981875,0.00009252176,0.00029987606,0.0013503057,0.0000471803,0.00002262891],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046648938,0.00037846822,0.00063415326,0.0004553352,0.00014416847,0.000033975117,0.0008739953,0.0006060412,0.00019354165],"category_scores_gemma":[0.00013008821,0.00037749612,0.000054627966,0.00022817604,0.00016194247,0.0001930606,0.0020747937,0.0008061909,0.000016974946],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006088393,0.00016847427,0.00012701852,0.0011610587,0.00029848824,0.00002350859,0.000022318185,0.0000014218299,0.43622178,0.000020294463,0.56007,0.0018247834],"study_design_scores_gemma":[0.0016415325,0.00003798164,0.002490451,0.0007105058,0.000092031514,0.00006436013,0.000057115165,9.95667e-7,0.009462521,0.000011740914,0.98503053,0.00040024164],"about_ca_topic_score_codex":0.0015602177,"about_ca_topic_score_gemma":0.0021846634,"teacher_disagreement_score":0.42675927,"about_ca_system_score_codex":0.00006506126,"about_ca_system_score_gemma":0.00015105998,"threshold_uncertainty_score":0.9998677},"labels":[],"label_agreement":null},{"id":"W6925879466","doi":"10.18739/a29k45v0m","title":"Stable isotope tree-ring records (Tungsten, Northwest Territories, Canada) 1900- 2003","year":2021,"lang":"en","type":"dataset","venue":"UC Santa Barbara","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Stable isotope ratio; Isotopes of oxygen; Precipitation; Isotope; Isotopes of carbon; δ13C; Geopotential; Isotopic signature","score_opus":0.010570358111161474,"score_gpt":0.22162020833681123,"score_spread":0.21104985022564976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6925879466","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009614873,0.005982057,0.0000012801985,0.000089658264,0.021899207,0.00031707977,0.9614827,0.00006407336,0.00054909143],"genre_scores_gemma":[0.00070344907,0.0020359806,0.000017303875,0.0002374322,0.0010326055,0.00008574072,0.9913276,0.000049362687,0.0045105135],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99752116,0.00022915643,0.00065997883,0.0007547581,0.00005981954,0.0007751541],"domain_scores_gemma":[0.9981458,0.00009784854,0.0002795088,0.0010802188,0.00031607723,0.000080503596],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016233747,0.0006053815,0.00089460256,0.00016440841,0.000492661,0.000120297605,0.00051647826,0.0008811539,0.008657389],"category_scores_gemma":[0.0001673558,0.00057901826,0.00012602167,0.0004917778,0.00007754071,0.00015271797,0.00028937444,0.0009908997,0.0002294662],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055827506,0.000109133565,0.0024603412,0.00009578574,0.00035662626,0.000054195698,0.000009561325,5.792466e-7,0.0031999273,0.000006090226,0.992676,0.00097592664],"study_design_scores_gemma":[0.00065035874,0.00010366112,0.00409391,0.00015213601,0.0002164435,0.00022735253,0.00008582866,3.5587468e-7,0.0020927363,0.0000016186968,0.99173045,0.0006451302],"about_ca_topic_score_codex":0.93542236,"about_ca_topic_score_gemma":0.9853104,"teacher_disagreement_score":0.049888007,"about_ca_system_score_codex":0.0003112398,"about_ca_system_score_gemma":0.0020526492,"threshold_uncertainty_score":0.99966615},"labels":[],"label_agreement":null},{"id":"W6926245560","doi":"10.25316/ir-12891","title":"The Nanaimo Free Press [Tuesday, April 30, 1889]","year":2019,"lang":"en","type":"other","venue":"VIURRSpace (Vancouver Island University)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.00837415618515846,"score_gpt":0.19572335161758395,"score_spread":0.18734919543242548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926245560","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000021319562,0.0021885298,0.00010130072,0.00018635944,0.009734779,0.00042663005,0.00034491337,0.00024654978,0.9867496],"genre_scores_gemma":[0.00061169517,0.002227352,0.000012025934,0.000024374913,0.00026838263,0.0000020140828,0.00000462205,0.00015996679,0.99668956],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987459,0.00018284516,0.0001296949,0.00045388073,0.00003465249,0.000453002],"domain_scores_gemma":[0.9985086,0.00012426695,0.00025923614,0.0010075134,0.00006762412,0.0000327671],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007954562,0.00038231962,0.00042479188,0.00025714212,0.0003883337,0.00004743017,0.0007605983,0.00074430055,0.0022263566],"category_scores_gemma":[0.00002891604,0.0002877984,0.0001910068,0.00020878135,0.00018119237,0.000083311825,0.0003821536,0.00046043753,0.0012689151],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008116752,0.000047657384,0.0000032095577,0.000029514516,0.00044575636,0.0000067809488,0.000052128045,0.0000019879433,0.00074421964,0.0020218897,0.99588233,0.00068337214],"study_design_scores_gemma":[0.0017387134,0.00009085051,0.000006516713,0.00008433077,0.00016291904,0.0000050587955,0.00023389269,8.1084397e-7,0.00030376104,0.000023532291,0.99697304,0.00037659067],"about_ca_topic_score_codex":0.002776955,"about_ca_topic_score_gemma":0.006020139,"teacher_disagreement_score":0.009939948,"about_ca_system_score_codex":0.000078549274,"about_ca_system_score_gemma":0.00010535404,"threshold_uncertainty_score":0.99995744},"labels":[],"label_agreement":null},{"id":"W6926264750","doi":"10.20381/ruor-25918","title":"Médicaments psychotropes et placement sous garde à l’adolescence : les perceptions et les attitudes des intervenant(e)s","year":2021,"lang":"fr","type":"other","venue":"uO Research (University of Ottawa)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Social justice; Poison control; Economic Justice; Personal autonomy","score_opus":0.0836357848849377,"score_gpt":0.3569529386221675,"score_spread":0.27331715373722976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926264750","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.677527,0.008835171,0.0047670393,0.009197835,0.0015974393,0.0014501426,0.0011370886,0.00015119069,0.29533708],"genre_scores_gemma":[0.37797165,0.020095581,0.0012761068,0.000029788358,0.00008992777,0.000004373287,0.00042819107,0.00007799643,0.60002637],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99593544,0.002313665,0.00027165294,0.0006572738,0.00012564781,0.0006963351],"domain_scores_gemma":[0.99836373,0.00022801262,0.00020507185,0.0005192024,0.00057471875,0.00010926323],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010167913,0.00034177612,0.0005767466,0.0006571392,0.0011856223,0.00006978255,0.0007119414,0.00075377926,0.125297],"category_scores_gemma":[0.00014827712,0.00037465838,0.00028556256,0.00034233258,0.0020275407,0.00014085711,0.0006866705,0.0013927702,0.00068516575],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022837959,0.005660226,0.35741153,0.0027619193,0.0034750784,0.00010345733,0.0054416666,0.00004813447,0.31866613,0.033541374,0.21116391,0.06149819],"study_design_scores_gemma":[0.0012260057,0.0006198145,0.33570877,0.002034541,0.00008447484,0.000046619487,0.004438166,0.0000042637485,0.00027951912,0.000037716803,0.6552102,0.0003099001],"about_ca_topic_score_codex":0.004554714,"about_ca_topic_score_gemma":0.03435763,"teacher_disagreement_score":0.4440463,"about_ca_system_score_codex":0.00021651226,"about_ca_system_score_gemma":0.0002907212,"threshold_uncertainty_score":0.99987054},"labels":[],"label_agreement":null},{"id":"W6926287196","doi":"10.25316/ir-9547","title":"Nanaimo Free Press [Friday, August 5, 1898]","year":2019,"lang":"en","type":"other","venue":"VIUSpace (Vancouver Island University Library)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Race (biology); Caliber; Table (database); White (mutation)","score_opus":0.006912569047895737,"score_gpt":0.18023257780223675,"score_spread":0.173320008754341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926287196","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014321652,0.0011526393,0.00007315433,0.00021507363,0.0060403575,0.0004330926,0.0011391905,0.00064300257,0.9901603],"genre_scores_gemma":[0.0007168381,0.0010012966,0.00008381196,0.000055284432,0.00028302128,0.0000013734712,0.00006320406,0.00026854387,0.99752665],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998669,0.00015818748,0.00014699026,0.0005566316,0.00003184848,0.00043731733],"domain_scores_gemma":[0.99871194,0.000059980146,0.0002454989,0.0009094134,0.000022271326,0.00005086487],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000022964447,0.0004472756,0.00056744507,0.00038289095,0.00016685408,0.00004756765,0.0007332248,0.0009936648,0.014589125],"category_scores_gemma":[0.000009826882,0.0004255532,0.00021960276,0.00022573068,0.000120296725,0.00041000865,0.0005842839,0.00047513345,0.0012637541],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014013518,0.00009809281,0.000037620382,0.000074315474,0.00041772146,0.000014505468,0.000049336297,0.0000015396004,0.00039262848,0.001197414,0.99741995,0.00015675159],"study_design_scores_gemma":[0.0022698038,0.00011112735,0.000043322456,0.00013521791,0.00015187044,0.000006011411,0.00013649215,5.468287e-7,0.0007528591,0.000028245324,0.9958348,0.0005296546],"about_ca_topic_score_codex":0.0032833936,"about_ca_topic_score_gemma":0.1632737,"teacher_disagreement_score":0.15999031,"about_ca_system_score_codex":0.00003716786,"about_ca_system_score_gemma":0.00012744333,"threshold_uncertainty_score":0.99981964},"labels":[],"label_agreement":null},{"id":"W6926299308","doi":"10.25318/1110000101-fra","title":"Enfants de 17 ans et moins vivant dans des familles à faible revenu (revenu de 1995), en proportion des enfants de 17 ans et moins vivant dans des familles économiques, Canada, provinces, territoires et régions socio-sanitaires, 1996","year":2019,"lang":"fr","type":"dataset","venue":"Statistics Canada Dissemination","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Child care; Public health; Food intake; Research methodology","score_opus":0.010361596872275732,"score_gpt":0.2717408758903824,"score_spread":0.2613792790181067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926299308","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32067028,0.0030390383,0.007322912,0.00063711114,0.0015968933,0.0011708089,0.66542417,0.0000612284,0.00007760505],"genre_scores_gemma":[0.2768666,0.036426995,0.005176671,0.00038420846,0.00020346521,0.00035021326,0.67760974,0.00018113511,0.0028009485],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99384964,0.0018147083,0.0013930554,0.0010832022,0.00021732936,0.0016420872],"domain_scores_gemma":[0.99604976,0.0013214302,0.0010685137,0.000809149,0.00041182767,0.00033929426],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0009844856,0.0011279287,0.0011295036,0.00034406778,0.0016563849,0.00041962738,0.0007530779,0.0009835655,0.00022280632],"category_scores_gemma":[0.0009962859,0.0011950043,0.00016057731,0.00032347962,0.0008740633,0.0010519365,0.0002560811,0.001151046,0.0000073381148],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00020918297,0.00072819175,0.032774754,0.0016311944,0.0009444288,0.00028518194,0.013068085,0.0004641534,0.057759076,0.004168143,0.8724949,0.015472727],"study_design_scores_gemma":[0.001886393,0.0011955766,0.59388345,0.007775786,0.0016757287,0.001219044,0.048199784,0.00045193013,0.011216617,0.00824012,0.32087758,0.003377961],"about_ca_topic_score_codex":0.98470557,"about_ca_topic_score_gemma":0.999614,"teacher_disagreement_score":0.5611087,"about_ca_system_score_codex":0.007174068,"about_ca_system_score_gemma":0.013731365,"threshold_uncertainty_score":0.9996433},"labels":[],"label_agreement":null},{"id":"W6926337519","doi":"10.25316/ir-13117","title":"Nanaimo Free Press [Saturday, April 28, 1894]","year":2019,"lang":"en","type":"other","venue":"VIUSpace (Vancouver Island University Library)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.006817216895589993,"score_gpt":0.1801694711992276,"score_spread":0.1733522543036376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926337519","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022256337,0.0015579393,0.000059419177,0.00030512668,0.0069850353,0.00044952452,0.0010455403,0.0006268209,0.988748],"genre_scores_gemma":[0.00079423666,0.001367758,0.000098145414,0.00006868267,0.00031382008,0.0000013434035,0.00009678857,0.00026111817,0.99699813],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985949,0.00017032112,0.00015098012,0.0005914805,0.000034878423,0.0004574508],"domain_scores_gemma":[0.9986454,0.00006343844,0.00025829644,0.0009556346,0.000024618328,0.000052583924],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000025911977,0.00047160863,0.00060272834,0.0003859933,0.00018013641,0.000049801332,0.0007564483,0.0011140478,0.009150456],"category_scores_gemma":[0.000011077332,0.00044276705,0.00023620127,0.00023454793,0.00012418824,0.00040409697,0.00061047927,0.0005378325,0.0011437266],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014733995,0.00009447431,0.000062981315,0.000075832366,0.0004497685,0.000015779242,0.00007763185,0.0000016075891,0.00058807235,0.000807511,0.99745923,0.00021975015],"study_design_scores_gemma":[0.0023075636,0.00011117444,0.000054552595,0.00012536366,0.0001333404,0.000007196782,0.00013228793,6.998121e-7,0.00075820443,0.000029107467,0.9957864,0.0005541049],"about_ca_topic_score_codex":0.0023515536,"about_ca_topic_score_gemma":0.12587981,"teacher_disagreement_score":0.12352825,"about_ca_system_score_codex":0.000039255046,"about_ca_system_score_gemma":0.00013066854,"threshold_uncertainty_score":0.9998024},"labels":[],"label_agreement":null},{"id":"W6926342110","doi":"10.25316/ir-12955","title":"Nanaimo Free Press [Wednesday, January 17, 1894]","year":2019,"lang":"en","type":"other","venue":"VIURRSpace (Vancouver Island University)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.009031780853554753,"score_gpt":0.19881006220594633,"score_spread":0.18977828135239158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926342110","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000025548708,0.0013161174,0.00009740807,0.000098127755,0.014053744,0.00047549824,0.0007228586,0.00034204338,0.9828687],"genre_scores_gemma":[0.0002575399,0.00082602794,0.000027927128,0.00003886972,0.00027973577,0.0000019044181,0.000013583931,0.00018752883,0.9983669],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986177,0.0001471485,0.00014313737,0.0005915682,0.00003477071,0.00046569586],"domain_scores_gemma":[0.99862665,0.000060511862,0.000265345,0.00093868165,0.00006410748,0.000044707598],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000051370065,0.00046762073,0.000605022,0.000577809,0.00017164103,0.000028060109,0.000619529,0.0010344457,0.003788255],"category_scores_gemma":[0.00001724575,0.0004464657,0.00022620648,0.00027286552,0.00012823394,0.00013341063,0.00037874153,0.0004816279,0.0011361734],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011068766,0.00010373961,0.000007802261,0.0000638516,0.00048163996,0.000019435047,0.000069976224,0.000003309983,0.0012443997,0.00060124166,0.9970994,0.00019451896],"study_design_scores_gemma":[0.0025123695,0.00013346503,0.000010652417,0.00015089074,0.00022517475,0.000011854145,0.00019688669,6.998582e-7,0.00029581037,0.000013433932,0.9959027,0.00054602546],"about_ca_topic_score_codex":0.0036761465,"about_ca_topic_score_gemma":0.0063060313,"teacher_disagreement_score":0.015498228,"about_ca_system_score_codex":0.000088081244,"about_ca_system_score_gemma":0.000116027964,"threshold_uncertainty_score":0.9997987},"labels":[],"label_agreement":null},{"id":"W6926345706","doi":"10.25316/ir-14648","title":"Nanaimo Free Press [Wednesday, October 20, 1886]","year":2020,"lang":"en","type":"other","venue":"VIUSpace (Vancouver Island University Library)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.007951363180644695,"score_gpt":0.18319483364760109,"score_spread":0.1752434704669564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926345706","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007591107,0.0012266851,0.00006221814,0.00065840076,0.007850081,0.00036287832,0.0015942117,0.00079035136,0.98737925],"genre_scores_gemma":[0.00037245912,0.0010045498,0.000112248104,0.0001387898,0.0004163236,0.0000015627601,0.00014666717,0.00026895717,0.99753845],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986003,0.0001749718,0.0001607537,0.000606119,0.00003473869,0.00042309327],"domain_scores_gemma":[0.9989315,0.000051607552,0.00023705856,0.0006798032,0.000018981202,0.000080995575],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000018258588,0.00047945417,0.0005984538,0.0002844987,0.0002031035,0.00004875275,0.0007291169,0.00091197545,0.020347225],"category_scores_gemma":[0.0000135006385,0.00045494694,0.00023703995,0.0002909242,0.00014468569,0.00037505417,0.000639904,0.00052931294,0.00071299047],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016007827,0.000071155504,0.000052729243,0.000065268,0.00047443804,0.000035758967,0.000116592564,0.0000013418683,0.0008222634,0.00056929496,0.9974896,0.00014151106],"study_design_scores_gemma":[0.001953855,0.00011623471,0.00003282619,0.00010365128,0.0001846351,0.0000062064964,0.00012778926,0.0000010951919,0.00088255526,0.000034999375,0.99600595,0.0005502072],"about_ca_topic_score_codex":0.002577263,"about_ca_topic_score_gemma":0.20384443,"teacher_disagreement_score":0.20126717,"about_ca_system_score_codex":0.00003924254,"about_ca_system_score_gemma":0.00016717492,"threshold_uncertainty_score":0.99979025},"labels":[],"label_agreement":null},{"id":"W6926363317","doi":"10.25384/sage.c.6955513","title":"Alignment Among Patient, Caregiver, and Health Care Provider Perspectives on Hemodialysis Vascular Access Decision-Making: A Qualitative Study","year":2023,"lang":"en","type":"other","venue":"Sage Journals Data","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Thematic analysis; Qualitative research; Health care; Vascular access; Autonomy; Hemodialysis; Experiential knowledge; Quality (philosophy); Patient satisfaction","score_opus":0.058255785717048154,"score_gpt":0.40208471841716276,"score_spread":0.3438289327001146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926363317","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2043086,0.74129254,0.0009989928,0.0013456247,0.009737617,0.0094778575,0.024518188,0.001246946,0.0070736487],"genre_scores_gemma":[0.9177884,0.06979906,0.00013458691,0.00016604071,0.0006944734,0.0002053576,0.00086872035,0.0009677795,0.009375622],"study_design_codex":"not_applicable","study_design_gemma":"qualitative","domain_scores_codex":[0.99715567,0.00097635336,0.0005070308,0.00090910343,0.000094866875,0.00035699745],"domain_scores_gemma":[0.99761015,0.000290652,0.00070451957,0.0012375173,0.00010100265,0.000056160767],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00072551874,0.00040527195,0.0008096775,0.00057428854,0.00037809118,0.00019327557,0.0006477535,0.00028624517,0.0028602013],"category_scores_gemma":[0.00022678556,0.00031774217,0.00012572028,0.00029442733,0.00009618794,0.00026877952,0.000904371,0.00047632583,0.00006682299],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017100076,0.0009870486,0.0037899953,0.000110680216,0.0064859744,0.000035275538,0.23278055,0.0000035167532,0.000047675723,0.000006413571,0.5317065,0.22387537],"study_design_scores_gemma":[0.0037162383,0.0014756229,0.013058479,0.006614544,0.00080018485,0.00002178443,0.7535832,9.5085807e-7,0.00002023751,0.00006561625,0.2196553,0.0009878352],"about_ca_topic_score_codex":0.0048899003,"about_ca_topic_score_gemma":0.0092178965,"teacher_disagreement_score":0.71347976,"about_ca_system_score_codex":0.00019026425,"about_ca_system_score_gemma":0.00012781926,"threshold_uncertainty_score":0.99992746},"labels":[],"label_agreement":null},{"id":"W6926377731","doi":"10.25316/ir-13014","title":"The Nanaimo Free Press [Tuesday, June 25, 1889]","year":2019,"lang":"en","type":"other","venue":"VIUSpace (Vancouver Island University Library)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.0060684711589096725,"score_gpt":0.1795567484291368,"score_spread":0.17348827727022711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926377731","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000092052025,0.0026218903,0.000036362882,0.00086831534,0.011023901,0.00045520737,0.00059979106,0.00043728188,0.9838652],"genre_scores_gemma":[0.0003709383,0.0032046032,0.000031450127,0.000048997004,0.00027600996,0.0000017306594,0.000051518393,0.00019927243,0.99581546],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987075,0.00020737763,0.00014653282,0.00045751542,0.0000339459,0.00044716525],"domain_scores_gemma":[0.99853545,0.00013590643,0.00025533378,0.0010084105,0.000024967507,0.000039941733],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000039835108,0.00039314805,0.00044064905,0.00020359375,0.00040064345,0.00007262458,0.0009139738,0.00076133624,0.003384201],"category_scores_gemma":[0.000015001849,0.00029347127,0.0002079871,0.00021005255,0.00018667488,0.0003036725,0.00060713285,0.00048460782,0.00082629477],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012284073,0.000056189918,0.000038460355,0.000033912434,0.0004247639,0.000007179993,0.00006199686,8.740634e-7,0.0002398755,0.0019313095,0.99680626,0.0002763516],"study_design_scores_gemma":[0.0016928958,0.000076551085,0.00004325986,0.00009039143,0.00012384057,0.000004704643,0.00019206265,7.3786913e-7,0.00041206717,0.00004301007,0.9969267,0.0003937475],"about_ca_topic_score_codex":0.0019931418,"about_ca_topic_score_gemma":0.2728723,"teacher_disagreement_score":0.27087918,"about_ca_system_score_codex":0.000031358453,"about_ca_system_score_gemma":0.000115377516,"threshold_uncertainty_score":0.9999517},"labels":[],"label_agreement":null},{"id":"W6926378363","doi":"10.25316/ir-13225","title":"The Nanaimo Free Press [Tuesday, June 24, 1890]","year":2019,"lang":"en","type":"other","venue":"VIURRSpace (Vancouver Island University)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.008648986266901547,"score_gpt":0.19605559540745143,"score_spread":0.18740660914054988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926378363","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000134890115,0.0024212466,0.00010256184,0.0003188906,0.024558824,0.00043729687,0.00037055454,0.00024606186,0.9715311],"genre_scores_gemma":[0.00026655826,0.002513443,0.000014377883,0.000021178153,0.00026245846,0.0000020038722,0.0000050117687,0.00015813504,0.99675685],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99875796,0.00017911982,0.00013053855,0.0004481831,0.000033834112,0.00045034604],"domain_scores_gemma":[0.9985349,0.00011850187,0.00026017296,0.0009888726,0.00006523673,0.00003230806],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007555372,0.00037938255,0.00043015438,0.00028025772,0.00038263176,0.000045745524,0.00074155896,0.0007319283,0.0012996432],"category_scores_gemma":[0.000027828084,0.0002851927,0.00019415088,0.00024176456,0.0001522419,0.00009006836,0.00036650148,0.00047733542,0.0008751934],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010611716,0.000051526356,0.0000034475431,0.000029079654,0.00044798097,0.0000073950832,0.000049556664,0.0000027115977,0.0006244456,0.001789873,0.9965483,0.0003395648],"study_design_scores_gemma":[0.001815621,0.000079113976,0.000004334151,0.0000876695,0.00017166446,0.000007682536,0.00022401521,9.173949e-7,0.00026267752,0.000021657463,0.99695206,0.00037257397],"about_ca_topic_score_codex":0.0024662253,"about_ca_topic_score_gemma":0.021367872,"teacher_disagreement_score":0.025225759,"about_ca_system_score_codex":0.00007150137,"about_ca_system_score_gemma":0.000096873344,"threshold_uncertainty_score":0.99996},"labels":[],"label_agreement":null},{"id":"W6926382505","doi":"10.21963/12754","title":"Benthic Marine Sponges Collected from Baffin Bay, North Labrador Sea, and Davis Strait aboard the CCGS Amundsen 2015 to 2017 as part of ArcticNet HiBio Project","year":2021,"lang":"en","type":"dataset","venue":"Canadian Cryospheric Information Network","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sponge; Benthic zone; Taxonomy (biology); Hook; Benthic habitat; Sponge spicule; Bay; Remotely operated vehicle","score_opus":0.010095928288120457,"score_gpt":0.22231320417527053,"score_spread":0.2122172758871501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926382505","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.070589386,0.0009467984,0.000003464844,0.00065636326,0.0030904044,0.0011716947,0.9231019,0.00003613118,0.0004038282],"genre_scores_gemma":[0.0024634127,0.0010694138,0.000115763054,0.001098575,0.00044751712,0.00011433625,0.99379563,0.000019722318,0.00087560824],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99816364,0.00023052197,0.000714298,0.0002753091,0.000055025917,0.00056122727],"domain_scores_gemma":[0.9982414,0.0001748069,0.0004661958,0.00067529705,0.0003016752,0.0001405826],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022752448,0.00039106578,0.00058645377,0.00012268338,0.00049486745,0.0001769513,0.0003890027,0.0005831399,0.005492185],"category_scores_gemma":[0.00015592763,0.00033024687,0.00009281106,0.0007126893,0.000121434525,0.0002720478,0.00019589989,0.0005110187,0.0002863944],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011364168,0.00001663686,0.0005266815,0.000056850316,0.00036358653,0.0000034177513,0.000245041,0.00010256844,0.0000046627197,0.000018845378,0.99603224,0.0025158054],"study_design_scores_gemma":[0.0005672799,0.00014863025,0.038039662,0.0001042508,0.00017615683,0.0000441867,0.00025309384,0.000007587741,0.0000075549674,0.0000095889445,0.9603032,0.00033883494],"about_ca_topic_score_codex":0.34383264,"about_ca_topic_score_gemma":0.9092675,"teacher_disagreement_score":0.5654349,"about_ca_system_score_codex":0.00016372843,"about_ca_system_score_gemma":0.0015729329,"threshold_uncertainty_score":0.99991494},"labels":[],"label_agreement":null},{"id":"W6926411279","doi":"10.25384/sage.17057104","title":"sj-docx-2-cjn-10.1177_08445621211058328 - Supplemental material for Measuring Scope of Practice Enactment Among Primary Care Registered Nurses","year":2021,"lang":"en","type":"article","venue":"Sage Journals Data","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Primary care; Scope (computer science); Scope of practice; Primary health care; Nursing practice; Primary nursing","score_opus":0.06613716921063713,"score_gpt":0.33350786070514565,"score_spread":0.26737069149450854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926411279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8392719,0.080668084,0.0004924073,0.0014071852,0.011090562,0.0015537281,0.062434584,0.00010866786,0.002972893],"genre_scores_gemma":[0.91813684,0.014015087,0.0039288537,0.0002490909,0.001250604,0.00011155846,0.057347655,0.0001127368,0.0048475782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981519,0.00032359784,0.00067889784,0.00042219184,0.000056261735,0.0003671803],"domain_scores_gemma":[0.99787265,0.00018322213,0.00055740325,0.0009663732,0.00037833073,0.000042000196],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005710698,0.00021835779,0.00045222192,0.000093073846,0.00031101887,0.00013378018,0.00047439503,0.00017187638,0.02410847],"category_scores_gemma":[0.00032120314,0.00019775619,0.00011801456,0.00011780584,0.000079912876,0.00093523716,0.0005137453,0.0002035776,0.000034144865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053953065,0.0003304186,0.00081419107,0.00016823226,0.00063134596,0.000017496395,0.00037656366,9.871799e-7,0.93145645,0.000007416321,0.042569157,0.023088237],"study_design_scores_gemma":[0.0027034786,0.00022691388,0.0058418405,0.0006899719,0.00037317356,0.00042867748,0.0019312818,2.9342567e-7,0.5190611,0.0000116287965,0.4685001,0.00023152771],"about_ca_topic_score_codex":0.00033488567,"about_ca_topic_score_gemma":0.00023775145,"teacher_disagreement_score":0.42593095,"about_ca_system_score_codex":0.00010317663,"about_ca_system_score_gemma":0.00022222298,"threshold_uncertainty_score":0.97678363},"labels":[],"label_agreement":null},{"id":"W6926487232","doi":"10.25316/ir-11509","title":"Nanaimo Free Press [Wednesday, November 13, 1895]","year":2019,"lang":"en","type":"other","venue":"VIURRSpace (Vancouver Island University)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.009390370637706069,"score_gpt":0.20034282794371658,"score_spread":0.19095245730601051,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926487232","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003643144,0.00093013555,0.000111588095,0.00011127697,0.01600554,0.0004335261,0.0006730228,0.00032646323,0.981372],"genre_scores_gemma":[0.0007123909,0.0005898866,0.000024017321,0.00003786052,0.00028084923,0.000001749222,0.0000105646095,0.00022599142,0.9981167],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986317,0.00012931717,0.00014248826,0.00059313007,0.00003581571,0.0004675152],"domain_scores_gemma":[0.99861354,0.000058126174,0.00026820714,0.00094356306,0.000072879404,0.000043716034],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000049490245,0.0004696584,0.00059912546,0.0005229792,0.00015321396,0.00002937372,0.0005832377,0.0010390306,0.0058295336],"category_scores_gemma":[0.000019785399,0.0004438703,0.00022350927,0.0002767472,0.00012423331,0.00012856768,0.000371135,0.0004660896,0.001578145],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010121863,0.000111243535,0.000011315041,0.000065846194,0.0004878207,0.000014954164,0.00006277138,0.0000037361465,0.0014967998,0.0007954732,0.9966347,0.00021410557],"study_design_scores_gemma":[0.002863796,0.00010889924,0.000014379317,0.00013725038,0.0002225275,0.000011464227,0.00013337613,8.7349616e-7,0.00035307152,0.00001209787,0.99559253,0.0005497238],"about_ca_topic_score_codex":0.006146188,"about_ca_topic_score_gemma":0.014941356,"teacher_disagreement_score":0.016744675,"about_ca_system_score_codex":0.0000871891,"about_ca_system_score_gemma":0.000108210654,"threshold_uncertainty_score":0.9998013},"labels":[],"label_agreement":null},{"id":"W6926525862","doi":"10.25318/4110006401-eng","title":"Regular child care use and reasons for not using child care, First Nations people living off reserve, Métis and Inuit, aged 1 to 5 years","year":2024,"lang":"en","type":"dataset","venue":"Statistics Canada Dissemination","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Child care; Poverty; Developing country; Developed country; Child poverty","score_opus":0.008046116475745798,"score_gpt":0.25293563616919135,"score_spread":0.24488951969344555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926525862","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04560325,0.0014629135,0.000078568046,0.000096176394,0.0011097695,0.0006162076,0.95101076,0.000019130297,0.0000032202024],"genre_scores_gemma":[0.11651255,0.00053609203,0.0004029488,0.000027876999,0.00008837397,0.00008783397,0.8821415,0.000036803394,0.00016605356],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99892306,0.000068790985,0.00027715517,0.00041535505,0.000049122682,0.00026651818],"domain_scores_gemma":[0.9985237,0.0007544892,0.00012971839,0.00026525534,0.0002703321,0.00005646513],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000094886695,0.00024681893,0.00029602484,0.00030340673,0.0008840185,0.00017214213,0.00010470751,0.00026336848,0.00006454181],"category_scores_gemma":[0.0014152159,0.00027624806,0.000028079903,0.00024490402,0.00003760496,0.00009259754,0.00014476084,0.0002667106,0.0000030655785],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002154494,0.0000126201685,0.00022664915,0.00065453077,0.00009748027,0.000003791082,0.00090119895,0.000006287553,0.0002084065,0.00018606127,0.9970579,0.0006234882],"study_design_scores_gemma":[0.00029964308,0.00011692978,0.10647846,0.0016974722,0.00053050864,0.000080553524,0.0017399758,0.0000078578405,0.00012776886,0.000008785511,0.8884042,0.00050783536],"about_ca_topic_score_codex":0.22504784,"about_ca_topic_score_gemma":0.9875501,"teacher_disagreement_score":0.7625022,"about_ca_system_score_codex":0.00028838107,"about_ca_system_score_gemma":0.00022198001,"threshold_uncertainty_score":0.99996895},"labels":[],"label_agreement":null},{"id":"W6926582803","doi":"10.25384/sage.22097728","title":"Supplemental Material - Sex-specific frailty and chronological age normative carotid artery intima-media thickness values using the Canadian longitudinal study of aging","year":2023,"lang":"en","type":"article","venue":"Sage Journals Data","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Normative; Longitudinal study; Carotid arteries; Ageing; Common carotid artery; Longitudinal data; Ultrasound; Vascular disease","score_opus":0.13348188944179995,"score_gpt":0.34376007790118446,"score_spread":0.2102781884593845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926582803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942302,0.0006111213,0.000037492362,0.0002099072,0.001446866,0.00027827997,0.003144878,0.000026166927,0.000015076848],"genre_scores_gemma":[0.998345,0.0005089068,0.00004168808,0.000016692637,0.00024102874,0.00000603852,0.0008091531,0.000011067911,0.000020391815],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998557,0.0004022427,0.00039406598,0.00026361097,0.000039750652,0.00034333934],"domain_scores_gemma":[0.99916047,0.00013503965,0.0001585045,0.0004595291,0.000045541095,0.000040910818],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00087259745,0.00016131719,0.00030220856,0.00019380433,0.00078751845,0.00015781874,0.00042648296,0.000120175224,0.0035419948],"category_scores_gemma":[0.00003943511,0.00010913903,0.000029910858,0.00021492712,0.00019298389,0.00033556324,0.0005603448,0.0003592398,0.000023457196],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012313075,0.00041811157,0.33168587,0.00004036481,0.0012502768,0.00014778883,0.016966648,0.00002200206,0.62490404,0.000018684723,0.010737273,0.0136858],"study_design_scores_gemma":[0.0016676777,0.00023325926,0.97255385,0.00016275336,0.00012963101,0.0007122629,0.015542941,0.000022133947,0.0056226454,0.00012349496,0.00296502,0.0002643576],"about_ca_topic_score_codex":0.03185473,"about_ca_topic_score_gemma":0.08981038,"teacher_disagreement_score":0.64086795,"about_ca_system_score_codex":0.000053255248,"about_ca_system_score_gemma":0.00007140267,"threshold_uncertainty_score":0.99736893},"labels":[],"label_agreement":null},{"id":"W6926599770","doi":"10.25318/1310090401-fra","title":"Évolution des caractéristiques de santé des jeunes entre 2019 et 2023, Enquête canadienne sur la santé des enfants et des jeunes, 2023 Échantillon longitudinal","year":2025,"lang":"fr","type":"dataset","venue":"Statistics Canada Dissemination","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Ethnic group; Research methodology; Population; Socialization","score_opus":0.008511967291368643,"score_gpt":0.2901199775017149,"score_spread":0.28160801021034626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926599770","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2840644,0.010769509,0.0038447203,0.00005089981,0.0022357367,0.00047719158,0.69836694,0.000045213586,0.00014534539],"genre_scores_gemma":[0.16708861,0.035237398,0.001398275,0.000052205127,0.00022971327,0.00011758495,0.78912395,0.000060559618,0.006691691],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.994962,0.0015660586,0.0010009645,0.0008942555,0.00012996391,0.0014467578],"domain_scores_gemma":[0.9944679,0.0028278509,0.000662356,0.00052121666,0.0012802812,0.00024036934],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010585134,0.00094022916,0.00095801405,0.000484907,0.001321211,0.00024864016,0.00044673838,0.0009247076,0.0013333703],"category_scores_gemma":[0.0036991844,0.0010187787,0.0001282508,0.0006383356,0.0011384597,0.0004854339,0.00020423178,0.0008672342,0.000018577564],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023927013,0.00031204676,0.026847528,0.0016269869,0.00066925795,0.00011126989,0.0008284422,0.00003130298,0.008925137,0.0015575085,0.9247176,0.034133654],"study_design_scores_gemma":[0.0009333841,0.0004238429,0.72731835,0.0034949451,0.001255705,0.0005222423,0.0021437514,0.00008077543,0.004119054,0.0026605367,0.25557384,0.0014735572],"about_ca_topic_score_codex":0.9425092,"about_ca_topic_score_gemma":0.9970348,"teacher_disagreement_score":0.70047086,"about_ca_system_score_codex":0.0025841428,"about_ca_system_score_gemma":0.0027104802,"threshold_uncertainty_score":0.99997896},"labels":[],"label_agreement":null},{"id":"W6926617799","doi":"10.25384/sage.19288093","title":"sj-pdf-1-roa-10.1177_01640275211070001 - Supplemental Material for Prospective Associations between Physical Activity and Memory in the Canadian Longitudinal Study on Aging: Examining Social Determinants","year":2022,"lang":"en","type":"article","venue":"Sage Journals Data","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Longitudinal study; Physical activity; Prospective cohort study; Longitudinal data; Social support; Social determinants of health; Association (psychology)","score_opus":0.13519372699336532,"score_gpt":0.38132568900290553,"score_spread":0.2461319620095402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926617799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9765445,0.00003366361,0.0000028888153,0.0004964843,0.00045226858,0.00075121335,0.021637736,0.00001026015,0.000070971626],"genre_scores_gemma":[0.9979172,0.000003970796,0.0000038428293,0.000025584597,0.00049720996,0.00012846454,0.0012671244,0.000013811857,0.00014282354],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99841493,0.0005959169,0.0002208188,0.00033581207,0.000057047266,0.0003754952],"domain_scores_gemma":[0.999241,0.0002554108,0.00018870676,0.00025651083,0.000030229126,0.000028124432],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012307746,0.00015741486,0.00031000533,0.00015393205,0.002200715,0.00015275193,0.00040743258,0.00006609644,0.0037389253],"category_scores_gemma":[0.000073496776,0.00013064145,0.000038763184,0.0001571333,0.00004803029,0.00027171333,0.00032532154,0.0004574879,0.000012482982],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024321307,0.001453287,0.9414074,0.0000064406704,0.0004969198,0.000021489663,0.006796879,7.103607e-7,0.018991832,0.000008783413,0.009428652,0.021144394],"study_design_scores_gemma":[0.0019441318,0.0005824361,0.991724,0.000010583688,0.0001239836,0.000032440417,0.0030019337,0.0000029571727,0.0007565709,0.000057738514,0.0016153393,0.00014789126],"about_ca_topic_score_codex":0.024545398,"about_ca_topic_score_gemma":0.0955112,"teacher_disagreement_score":0.070965804,"about_ca_system_score_codex":0.0002528274,"about_ca_system_score_gemma":0.00013989309,"threshold_uncertainty_score":0.9990983},"labels":[],"label_agreement":null},{"id":"W6926620871","doi":"10.25316/ir-12738","title":"Nanaimo Free Press [Friday, July 14, 1893]","year":2019,"lang":"en","type":"other","venue":"VIUSpace (Vancouver Island University Library)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.006620033373089109,"score_gpt":0.17884414705640295,"score_spread":0.17222411368331383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926620871","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000058811307,0.0012826916,0.000074817704,0.00023043591,0.0065483097,0.0004397385,0.0013150381,0.0006013226,0.98944885],"genre_scores_gemma":[0.0004969347,0.001080872,0.00008967582,0.00006420577,0.00028159533,0.0000014419516,0.000053382926,0.00025549324,0.9976764],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99863327,0.0001653291,0.00015259732,0.00056799606,0.000034507142,0.0004463107],"domain_scores_gemma":[0.9986948,0.000062918116,0.00025458494,0.0009083647,0.00002761416,0.000051741255],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000025101612,0.00045704714,0.00058048044,0.0003854963,0.00017572485,0.00004746495,0.0007286314,0.0010296141,0.007399033],"category_scores_gemma":[0.000011866225,0.00043344402,0.0002286802,0.00022453198,0.00011658187,0.00041361578,0.0005558915,0.0005180446,0.0017907014],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000142204,0.00009777928,0.000015890375,0.000076521996,0.0004353448,0.0000151091335,0.0000644738,0.0000017064804,0.0003193068,0.0006467522,0.99799925,0.00018567278],"study_design_scores_gemma":[0.0023589262,0.00012090798,0.000024633924,0.00014540028,0.00015571393,0.0000063446228,0.00007055185,4.4126827e-7,0.0008370703,0.000033849392,0.9957064,0.00053976645],"about_ca_topic_score_codex":0.0013945121,"about_ca_topic_score_gemma":0.09248204,"teacher_disagreement_score":0.09108753,"about_ca_system_score_codex":0.00003513231,"about_ca_system_score_gemma":0.00012636639,"threshold_uncertainty_score":0.9998117},"labels":[],"label_agreement":null},{"id":"W6926641093","doi":"10.25549/pcra-c14-181879","title":"Yevanhelʹsʹkyy holos = Evangelical Voice, 2000, no. 2 (2000 April-June), whole no. 130","year":2021,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Slavic languages; Christianity; Interpretation (philosophy); Symbol (formal)","score_opus":0.006352995439982174,"score_gpt":0.17197370220515046,"score_spread":0.1656207067651683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926641093","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0054431804,0.0009846103,0.000004210792,0.00016983632,0.00095809664,0.00021161,0.9905368,0.00014701561,0.0015446153],"genre_scores_gemma":[0.00013161812,0.00017333827,0.00002602035,0.00009688592,0.00031014136,7.3574756e-7,0.9644884,0.000046099718,0.034726765],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984103,0.00013006676,0.000360297,0.00058545714,0.000060076378,0.0004538072],"domain_scores_gemma":[0.9986606,0.0001120367,0.00029490434,0.0006579078,0.00017594156,0.00009860331],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005003144,0.00045512352,0.00070206117,0.0002328775,0.00023876512,0.00011855885,0.0006326971,0.0009728899,0.0061349366],"category_scores_gemma":[0.000069940594,0.0004547912,0.00040350997,0.00024186449,0.00034436607,0.00036546018,0.00069118687,0.0006641336,0.7217506],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036901102,0.00038853814,0.00024103861,0.00012393488,0.00034270572,0.00005053777,0.00002371371,7.2391356e-7,0.0006725863,8.974589e-8,0.99736154,0.00042560094],"study_design_scores_gemma":[0.0009288917,0.00011435773,0.000014346514,0.00015161214,0.00015839677,0.000038105885,0.00037985275,8.0692223e-7,0.00012758891,0.000015375505,0.9975981,0.00047257412],"about_ca_topic_score_codex":0.00009645404,"about_ca_topic_score_gemma":0.00002469218,"teacher_disagreement_score":0.7156157,"about_ca_system_score_codex":0.000060986476,"about_ca_system_score_gemma":0.00047496904,"threshold_uncertainty_score":0.9997904},"labels":[],"label_agreement":null},{"id":"W6926656391","doi":"10.25318/2710030301-fra","title":"Facteur de motivation principal pour l'utilisation ou le développement des bioproduits, selon l'industrie et la taille de l'entreprise","year":2019,"lang":"fr","type":"dataset","venue":"Statistics Canada Dissemination","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Statistical analysis; Principal (computer security); Context (archaeology); Agrégation","score_opus":0.022779362626172486,"score_gpt":0.28340653795972354,"score_spread":0.26062717533355106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926656391","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24719626,0.00027080573,0.015229194,0.0017739817,0.001613979,0.000717224,0.7331026,0.000033397297,0.000062565385],"genre_scores_gemma":[0.123107225,0.0009731872,0.0011964662,0.00009007108,0.00011859866,0.00007668264,0.8685842,0.000047509322,0.0058060666],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973242,0.0007438816,0.0006493771,0.00055914547,0.00010425716,0.000619125],"domain_scores_gemma":[0.99754226,0.0008594945,0.0005918177,0.0004089288,0.00049580383,0.000101673904],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006843077,0.00046677396,0.00040955414,0.00020238136,0.00051086815,0.00012146973,0.0002390136,0.0007358883,0.001096876],"category_scores_gemma":[0.0017132648,0.0005276754,0.00005093606,0.00026145048,0.0001142177,0.00017965343,0.00010918241,0.00063824723,0.00008193873],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008749571,0.00034963756,0.017370349,0.0003659716,0.00023601779,0.000012345053,0.00037149873,0.0001468501,0.02517088,0.0020394074,0.938763,0.015086551],"study_design_scores_gemma":[0.0008763299,0.0001309299,0.47650054,0.00035932116,0.00027102805,0.00007737535,0.0008263467,0.000086450906,0.0144977365,0.00042601395,0.5053722,0.00057570037],"about_ca_topic_score_codex":0.14043571,"about_ca_topic_score_gemma":0.25973237,"teacher_disagreement_score":0.45913017,"about_ca_system_score_codex":0.001469485,"about_ca_system_score_gemma":0.0030207944,"threshold_uncertainty_score":0.99981624},"labels":[],"label_agreement":null},{"id":"W6926683126","doi":"10.25384/sage.22309878","title":"Supplemental material - Social support and social strain from children and subsequent health and well-being among older U.S. adults","year":2023,"lang":"en","type":"article","venue":"Sage Journals Data","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Social support; Strain (injury); Life course approach; Social relationship; Social isolation; Social environment","score_opus":0.018985540616829784,"score_gpt":0.2907333090791728,"score_spread":0.271747768462343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926683126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9797255,0.0007986746,0.0000041326734,0.0018019889,0.0005558095,0.0002185389,0.016838854,0.000045498236,0.000011000642],"genre_scores_gemma":[0.97862756,0.0029591601,0.000016710728,0.00014881646,0.0005227129,0.000004501474,0.017649997,0.000018115856,0.000052445637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987557,0.00017784974,0.00034234556,0.0003467687,0.000027442627,0.00034989385],"domain_scores_gemma":[0.9996023,0.000028984303,0.00016435594,0.00013945554,0.0000142292865,0.000050657974],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045737863,0.00016290274,0.0002962169,0.000090559806,0.00074450095,0.00015967379,0.00014204328,0.00015510964,0.0044038394],"category_scores_gemma":[0.000009248495,0.0001489827,0.00002492537,0.00006550447,0.0001291161,0.00033995148,0.00047031336,0.00021966535,0.000018251685],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005560902,0.00023473661,0.4142945,0.00010016067,0.0012433965,0.000028613475,0.018247293,2.9125724e-8,0.16337854,0.00006819766,0.10841293,0.29343548],"study_design_scores_gemma":[0.0023674958,0.00008967534,0.99260277,0.00008441699,0.00004409028,0.000115075774,0.0013932944,0.0000010603401,0.0005480597,0.00009954918,0.002482963,0.00017156552],"about_ca_topic_score_codex":0.0017445559,"about_ca_topic_score_gemma":0.0005706586,"teacher_disagreement_score":0.5783082,"about_ca_system_score_codex":0.000016453458,"about_ca_system_score_gemma":0.00004252312,"threshold_uncertainty_score":0.9965063},"labels":[],"label_agreement":null},{"id":"W6926721481","doi":"10.25316/ir-11313","title":"Nanaimo Free Press [Thursday, October 24, 1895]","year":2019,"lang":"en","type":"other","venue":"VIUSpace (Vancouver Island University Library)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.007396062672604213,"score_gpt":0.1811350416239967,"score_spread":0.1737389789513925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926721481","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023724392,0.0014411159,0.00005433496,0.00032127055,0.008764587,0.00046172802,0.0010650993,0.0006059425,0.9870487],"genre_scores_gemma":[0.0005716637,0.0011309796,0.00008688233,0.00007632388,0.0002965059,0.0000015126084,0.000093268216,0.00027388855,0.99746895],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985637,0.00017346907,0.00016021787,0.00059731345,0.000035850244,0.00046941964],"domain_scores_gemma":[0.99863523,0.0000639573,0.00026117873,0.0009603812,0.000025059837,0.000054207667],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00002607008,0.00047862154,0.0006017413,0.00039230924,0.0001697059,0.00004829501,0.0007360321,0.0010709505,0.0132407835],"category_scores_gemma":[0.000010563112,0.0004494495,0.0002476964,0.00023462098,0.0001306171,0.00042648852,0.0005835784,0.0005173966,0.0013582098],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015307413,0.00010898247,0.000095177995,0.00007013894,0.0004671716,0.00001486702,0.000080493846,0.0000015629158,0.00046805132,0.00087080325,0.9974989,0.00017077508],"study_design_scores_gemma":[0.0025201878,0.00011467177,0.00005949983,0.0001438758,0.00016993361,0.0000067633528,0.0001289678,6.370493e-7,0.00079626654,0.000032434513,0.99545914,0.00056762766],"about_ca_topic_score_codex":0.0027586112,"about_ca_topic_score_gemma":0.15497786,"teacher_disagreement_score":0.15221924,"about_ca_system_score_codex":0.000037840462,"about_ca_system_score_gemma":0.00012469506,"threshold_uncertainty_score":0.99979573},"labels":[],"label_agreement":null},{"id":"W6926722162","doi":"10.25384/sage.c.5568228","title":"Disrupted and Restored Patient Experience With Transition to New Electronic Health Record System","year":2021,"lang":"en","type":"other","venue":"Sage Journals Data","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Patient experience; Electronic health record; Health care; Patient record; Patient care; Health records; Healthcare system; Quarter (Canadian coin); Medical record","score_opus":0.02802687645700724,"score_gpt":0.2970710933875575,"score_spread":0.26904421693055025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926722162","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.103170134,0.8236004,0.03763665,0.0065557132,0.008513306,0.0038124504,0.007492255,0.00072359404,0.008495466],"genre_scores_gemma":[0.2304876,0.2852761,0.0076859146,0.0036117032,0.00489331,0.0003313785,0.023452714,0.002209835,0.44205147],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987335,0.00021675101,0.00029114602,0.00041156492,0.000023860584,0.00032318576],"domain_scores_gemma":[0.99898165,0.000016159058,0.00025490997,0.0006481951,0.000023695235,0.000075370204],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013635374,0.00020167533,0.000411186,0.00014968624,0.00013322396,0.00005516542,0.00020100338,0.00019312462,0.0046031885],"category_scores_gemma":[0.000014309115,0.00015581843,0.000024538806,0.0001662348,0.000021692944,0.00007609191,0.00009630544,0.00030836312,0.000022721479],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036001616,0.00013460297,0.0001869457,0.00022497198,0.00064606324,0.000024223273,0.002046477,7.155712e-7,0.038545825,0.000015899892,0.56542444,0.3923898],"study_design_scores_gemma":[0.000714916,0.000569945,0.0003900015,0.0050298255,0.000049855378,0.000756271,0.0007770072,6.989689e-7,0.00026059404,0.000002076144,0.9912059,0.00024295576],"about_ca_topic_score_codex":0.0044189137,"about_ca_topic_score_gemma":0.005042447,"teacher_disagreement_score":0.53832436,"about_ca_system_score_codex":0.000079771366,"about_ca_system_score_gemma":0.00025546568,"threshold_uncertainty_score":0.9963067},"labels":[],"label_agreement":null},{"id":"W6926745604","doi":"10.25318/3710018001-eng","title":"Percentage of graduates who borrowed from government student loan programs and their average debt at graduation","year":2020,"lang":"en","type":"dataset","venue":"Statistics Canada Dissemination","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Graduation (instrument); Student loan; Government (linguistics); Debt; Student debt; Loan; Higher education","score_opus":0.007850350496226911,"score_gpt":0.23891372935855634,"score_spread":0.23106337886232944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926745604","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06065073,0.00029526075,0.00016595551,0.00007841341,0.0007522616,0.00038209467,0.93766,0.000010433211,0.0000048759125],"genre_scores_gemma":[0.13620356,0.00044344546,0.000021692538,0.0000216005,0.000036537163,0.000035673726,0.8630153,0.000014821379,0.0002073717],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989045,0.000109824454,0.00039661324,0.00032409313,0.00008607588,0.00017887841],"domain_scores_gemma":[0.9990693,0.00024856217,0.00036967167,0.0001861095,0.00008527889,0.000041132094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006501086,0.00027587634,0.00038452444,0.00003089748,0.00016099025,0.000034721263,0.00012587813,0.00016946856,0.00023977229],"category_scores_gemma":[0.000089734975,0.00024392549,0.000029378523,0.000062471,0.000060874176,0.00004052249,0.000116731615,0.0001824347,0.0000066085827],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064809334,0.00010245334,0.00076254987,0.000091620735,0.0002072011,0.000003179204,0.00020467782,3.4254865e-7,0.01187086,0.000050858725,0.98163116,0.005010294],"study_design_scores_gemma":[0.0010419913,0.0004107685,0.09818216,0.0003771818,0.00042353853,0.00001199419,0.0010926138,0.000016691783,0.013189651,0.00010047515,0.88453764,0.0006152883],"about_ca_topic_score_codex":0.100864984,"about_ca_topic_score_gemma":0.5501496,"teacher_disagreement_score":0.4492846,"about_ca_system_score_codex":0.0002941492,"about_ca_system_score_gemma":0.00008724111,"threshold_uncertainty_score":0.99469924},"labels":[],"label_agreement":null},{"id":"W6926773010","doi":"10.25549/webster-c100-10385","title":"The 2000 Partnership: Our Many Voices: A New Composition, 1991","year":2021,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Commission; Interim; Newspaper; Royal Commission; Variety (cybernetics); Population","score_opus":0.008857898268263996,"score_gpt":0.18393594154279339,"score_spread":0.1750780432745294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926773010","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002018418,0.0010009031,0.0000045877723,0.0007258417,0.00023025245,0.00011452938,0.9954207,0.00006596008,0.00041881058],"genre_scores_gemma":[0.00066218735,0.00025774754,0.0000067176225,0.000050201023,0.00013850842,2.3919557e-7,0.9850985,0.000017114166,0.013768789],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991429,0.0000943997,0.00021262567,0.00026995354,0.000030492241,0.00024961916],"domain_scores_gemma":[0.9992013,0.00006786329,0.00023177246,0.00040401725,0.000040607887,0.00005445283],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00003767233,0.0002362503,0.00032860137,0.000081573766,0.0003811776,0.0001461249,0.00048134508,0.00039071016,0.002856197],"category_scores_gemma":[0.000011219181,0.00019349961,0.00024037546,0.00015011005,0.00012748329,0.00018384281,0.00032245988,0.0003335823,0.014955892],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015098209,0.00009464699,0.00028522892,0.000031621596,0.00026299857,0.00001053291,0.000028264321,6.575033e-7,0.0000770236,0.0000054288116,0.9985734,0.00047919634],"study_design_scores_gemma":[0.0004901607,0.000037139365,0.000019076693,0.00009186189,0.00010482672,0.000030638246,0.0014015612,1.8601678e-7,0.000049369057,0.000060734343,0.99750286,0.0002115905],"about_ca_topic_score_codex":0.0003959258,"about_ca_topic_score_gemma":0.00005540583,"teacher_disagreement_score":0.013349979,"about_ca_system_score_codex":0.000024189876,"about_ca_system_score_gemma":0.00026336382,"threshold_uncertainty_score":0.99805534},"labels":[],"label_agreement":null},{"id":"W6926789003","doi":"10.25318/1410026501-fra","title":"Nombre d'employés, (EERH), selon le type d'employé et la Classification type des industries, 1980 (CTI)","year":2020,"lang":"fr","type":"dataset","venue":"Statistics Canada Dissemination","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Type (biology); Identification (biology); Identity (music); Subject (documents)","score_opus":0.023717272630377578,"score_gpt":0.28378811394797004,"score_spread":0.26007084131759245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926789003","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008396383,0.0010568429,0.000691725,0.0011168162,0.0054853153,0.00049238384,0.98247576,0.00007484179,0.0002099553],"genre_scores_gemma":[0.039330497,0.0018513027,0.00038758834,0.00014714123,0.00021954653,0.000035425644,0.95464754,0.00007766614,0.003303302],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740887,0.00067887007,0.00070341915,0.000621356,0.00010251306,0.00048497095],"domain_scores_gemma":[0.99712306,0.0008078161,0.0005397304,0.0004409344,0.00095405383,0.00013438104],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028216487,0.00054256804,0.00056238193,0.0001617616,0.0006561994,0.00015248854,0.00033332384,0.000990311,0.00068746624],"category_scores_gemma":[0.0016090655,0.00060913566,0.00003873614,0.0008107869,0.00030291206,0.00019882189,0.000121651,0.0010637857,0.00029958648],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016490112,0.00019076234,0.00043916763,0.00029494817,0.00027733904,0.000020291094,0.00014357464,0.0000060634993,0.0137934545,0.014944842,0.95836604,0.011358636],"study_design_scores_gemma":[0.00041516792,0.00034907545,0.048885837,0.0002484672,0.00031952496,0.0000766927,0.00046248588,0.000016374552,0.0011675274,0.0002113192,0.9472612,0.00058630644],"about_ca_topic_score_codex":0.22786099,"about_ca_topic_score_gemma":0.5913086,"teacher_disagreement_score":0.3634476,"about_ca_system_score_codex":0.00049102586,"about_ca_system_score_gemma":0.003192085,"threshold_uncertainty_score":0.999636},"labels":[],"label_agreement":null},{"id":"W6926791742","doi":"10.25549/wpacards-m24679","title":"WPA block face card for household census of Second, Third, Mott, Fickett Streets, in Los Angeles","year":2012,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Census; Block (permutation group theory); Face (sociological concept); Quarter (Canadian coin); Population","score_opus":0.01290259711855314,"score_gpt":0.1778246336897219,"score_spread":0.16492203657116877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926791742","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10285638,0.00053313497,0.000001417736,0.000017148663,0.00013256105,0.00025158367,0.8959989,0.00003832238,0.00017053133],"genre_scores_gemma":[0.02149739,0.000050257666,0.0000142238105,0.000011435203,0.000055940392,6.3046383e-7,0.97760427,0.00002570665,0.0007401197],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99909747,0.00005069407,0.000285031,0.00025563248,0.000024433062,0.00028671543],"domain_scores_gemma":[0.9991886,0.00011359808,0.00031021997,0.00031716964,0.000031236057,0.00003915708],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000045830177,0.00026246658,0.00053347176,0.00022591675,0.00007283702,0.00001853506,0.00036070176,0.00057067635,0.00036704174],"category_scores_gemma":[0.000013929113,0.0002627909,0.00024483714,0.00011630184,0.00018024558,0.00018907021,0.00024602466,0.0002632965,0.0002238793],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037275365,0.0002632011,0.0034332443,0.00026895734,0.000183369,0.0000027690871,0.000021316198,0.0000032612622,0.00041780568,0.0000024567807,0.9947437,0.00028713606],"study_design_scores_gemma":[0.00093805214,0.00006868571,0.00013611729,0.00010480084,0.00009315687,0.000008963171,0.00080691563,3.2348288e-7,0.0005893787,0.000016884893,0.99699116,0.0002455809],"about_ca_topic_score_codex":0.00019202646,"about_ca_topic_score_gemma":0.0001738027,"teacher_disagreement_score":0.08160538,"about_ca_system_score_codex":0.000019921532,"about_ca_system_score_gemma":0.00007298322,"threshold_uncertainty_score":0.9999824},"labels":[],"label_agreement":null},{"id":"W6926829280","doi":"10.25549/one-c4-4457","title":"Weathers photograph album 12, 1988-1992","year":2021,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Photography; Line drawings; Feature (linguistics); Subject (documents)","score_opus":0.006229192885555545,"score_gpt":0.16112642283258033,"score_spread":0.1548972299470248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926829280","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00932251,0.0005020234,0.000004091193,0.000086800086,0.00024973036,0.00012537531,0.98859745,0.00009228079,0.001019733],"genre_scores_gemma":[0.0007075362,0.00026590689,0.000011798967,0.000047019403,0.000057875804,3.173241e-7,0.9958649,0.00002623097,0.0030183604],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99902457,0.000092246504,0.00021690232,0.00036725713,0.000028747085,0.0002702763],"domain_scores_gemma":[0.9991797,0.00007889814,0.00022231611,0.00044146652,0.00002827067,0.000049317638],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000038205897,0.0002969083,0.00046594834,0.00021950474,0.00017143603,0.00007037355,0.0004241585,0.000593552,0.021125875],"category_scores_gemma":[0.000016055665,0.0003025079,0.00039009642,0.00018473789,0.00026219792,0.00018816449,0.00037415454,0.00036087926,0.012099925],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020524155,0.00020666364,0.00074666174,0.00007236029,0.0003772047,0.000021772115,0.000019927866,3.6773358e-7,0.00058343954,8.9863e-7,0.99718773,0.0005777281],"study_design_scores_gemma":[0.00059919147,0.000047381753,0.000018803054,0.00011189715,0.00012389164,0.000030479125,0.0009956888,8.3901256e-8,0.00028483846,0.000022012535,0.9974627,0.00030303965],"about_ca_topic_score_codex":0.00040028448,"about_ca_topic_score_gemma":0.000050094943,"teacher_disagreement_score":0.00902595,"about_ca_system_score_codex":0.00001450652,"about_ca_system_score_gemma":0.0001316473,"threshold_uncertainty_score":0.9999427},"labels":[],"label_agreement":null},{"id":"W6926832594","doi":"10.25549/webster-c100-10170","title":"Voter Information Pamphlet, 1992-06-02","year":2021,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Commission; Newspaper; Economic Justice; Variety (cybernetics); Royal Commission; Criminal justice","score_opus":0.004845705356590195,"score_gpt":0.15291831725530228,"score_spread":0.14807261189871207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926832594","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004322159,0.00012999773,0.000014688383,0.00013744575,0.00014034701,0.00009803615,0.994301,0.00006922246,0.0007870932],"genre_scores_gemma":[0.00082802254,0.00007377012,0.000011534874,0.00006892535,0.000048119367,2.0751914e-7,0.9978172,0.000010517789,0.0011417094],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993421,0.000045664547,0.0002293055,0.00017213916,0.000024621086,0.00018620666],"domain_scores_gemma":[0.99933827,0.00004004097,0.00024036938,0.00031010184,0.000039719533,0.000031512882],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000024171437,0.00021151298,0.00032519334,0.0001703147,0.00012630294,0.000087898625,0.00028218632,0.00049017405,0.010705547],"category_scores_gemma":[0.000016002405,0.000211198,0.00020225582,0.00013002072,0.00010624915,0.0005805601,0.00034195973,0.00027398553,0.039152626],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000770133,0.000078425786,0.00024751198,0.00007918944,0.00014782944,0.0000047611593,0.000020025553,0.0000010790941,0.00005631804,0.000002305833,0.9986074,0.0006781142],"study_design_scores_gemma":[0.00046610364,0.000032523414,0.000011243359,0.00008845273,0.000057682322,0.000021568172,0.0005080619,3.1756895e-7,0.00008612392,0.000028855478,0.9984807,0.00021836282],"about_ca_topic_score_codex":0.00017338997,"about_ca_topic_score_gemma":0.000014709719,"teacher_disagreement_score":0.028447077,"about_ca_system_score_codex":0.000015789488,"about_ca_system_score_gemma":0.00012037986,"threshold_uncertainty_score":0.9901988},"labels":[],"label_agreement":null},{"id":"W6926853429","doi":"10.25919/fm13-fs15","title":"Parkes observations for project P885 semester 2022OCTS_14","year":2022,"lang":"en","type":"dataset","venue":"CSIRO","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Event (particle physics); Track (disk drive); Swift; Flux (metallurgy); Cadence","score_opus":0.06600437109744967,"score_gpt":0.3054830743845131,"score_spread":0.23947870328706344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926853429","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019026926,0.0007625557,0.000008118177,0.00020779792,0.0053419587,0.0007769904,0.99089825,0.000061266444,0.000040362134],"genre_scores_gemma":[0.000009374117,0.00025839786,0.000025871848,0.00020639997,0.00023432249,0.0010127318,0.99066645,0.000022750251,0.0075637205],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989269,0.0001259641,0.00029061848,0.00035139616,0.000013151338,0.00029198802],"domain_scores_gemma":[0.9990763,0.00018656843,0.0001692853,0.00048885157,0.00006840092,0.000010581688],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00015107988,0.00024391116,0.00034271597,0.0001676108,0.00047330375,0.00003722001,0.00028665568,0.00036465997,0.0023456637],"category_scores_gemma":[0.00011218738,0.00021897483,0.00017307991,0.00016233328,0.000045248544,0.000075641496,0.00016654325,0.00034599603,0.000014254542],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054410688,0.00012651816,0.000032975513,0.000084347754,0.00018724501,5.590295e-7,0.000017940982,5.746764e-7,0.0036578323,0.000039073893,0.99559736,0.00020115996],"study_design_scores_gemma":[0.0005767229,0.00020134197,0.00031754424,0.000015751779,0.00016719413,0.00002854298,0.000038758422,1.6437961e-7,0.00014229555,0.000037633945,0.99822086,0.00025316034],"about_ca_topic_score_codex":0.00046547738,"about_ca_topic_score_gemma":0.00021601237,"teacher_disagreement_score":0.0075233583,"about_ca_system_score_codex":0.000043143154,"about_ca_system_score_gemma":0.00014490723,"threshold_uncertainty_score":0.9985663},"labels":[],"label_agreement":null},{"id":"W6926950213","doi":"10.25446/oxford.25781907","title":"54018: Canadian Field Ambulance","year":2024,"lang":"en","type":"other","venue":"Open MIND","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Field (mathematics)","score_opus":0.022878303096525766,"score_gpt":0.2894882982458011,"score_spread":0.2666099951492753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926950213","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005037823,0.002350323,0.0000011784813,0.00045447404,0.0038132688,0.00021589693,0.00024731492,0.0000061151773,0.9924076],"genre_scores_gemma":[0.0027198475,0.00006390791,0.00009657759,0.00008440679,0.00020432488,0.000014387905,0.00015964369,0.000109207285,0.9965477],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999444,0.00002321093,0.00009370106,0.0002474563,0.0000036901877,0.00018793666],"domain_scores_gemma":[0.99967986,0.000010093219,0.000036985308,0.00024086882,0.000008359263,0.000023825258],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000048537662,0.00013146747,0.00019386905,0.00013769683,0.000039458457,0.00008275431,0.00025421003,0.00045254914,0.3032043],"category_scores_gemma":[0.00001097022,0.000112879985,0.000039099083,0.000063776715,0.000018339751,0.000020743168,0.0000858812,0.00020597162,0.072731905],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004119692,0.000007093947,0.000022843173,0.0000059702156,0.00010899293,0.000004739059,0.000027528815,7.504412e-9,0.0017223761,0.000044696742,0.9690569,0.028994702],"study_design_scores_gemma":[0.00012191254,0.000034865367,0.000018660256,0.000120675926,0.000033988203,0.0000265212,0.000012516732,3.034868e-8,0.0016285134,0.00001746872,0.9978413,0.00014355686],"about_ca_topic_score_codex":0.2761501,"about_ca_topic_score_gemma":0.58914185,"teacher_disagreement_score":0.31299177,"about_ca_system_score_codex":0.000020665699,"about_ca_system_score_gemma":0.00013038679,"threshold_uncertainty_score":0.9279901},"labels":[],"label_agreement":null},{"id":"W6926954021","doi":"10.25549/webster-c100-10685","title":"The Administration of Justice Under Emergency Conditions in the District of Columbia, 1973-03","year":2021,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Commission; Administration (probate law); Newspaper; Economic Justice; Administration of justice; Criminal justice","score_opus":0.009083748223340772,"score_gpt":0.19555122710355705,"score_spread":0.18646747888021628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926954021","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07702548,0.0002342217,0.000004051959,0.00013867457,0.00014540773,0.00011471748,0.92194474,0.0000064722267,0.00038624727],"genre_scores_gemma":[0.10366662,0.0002930069,0.0000015856352,0.00000819117,0.00002010579,4.819376e-7,0.8952694,0.000005649775,0.0007349388],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999339,0.00011941637,0.0002764557,0.00012831484,0.000028702014,0.000108098626],"domain_scores_gemma":[0.9991448,0.00019412904,0.00032103524,0.0002796104,0.000049664814,0.00001074522],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000053814616,0.00010306284,0.00021879814,0.000053373107,0.00016831928,0.00002421967,0.00033992433,0.0002043239,0.00260612],"category_scores_gemma":[0.00003302589,0.00008649776,0.00014377263,0.00021537197,0.00024152423,0.00009933879,0.000112616195,0.00018617375,0.00029057413],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012836828,0.00028664316,0.00096593116,0.00010612589,0.00013273227,0.0000033616998,0.000035788627,0.000001823684,0.00021061963,0.000028752713,0.9979761,0.00012373201],"study_design_scores_gemma":[0.00028021086,0.00007631162,0.0012180419,0.00005241633,0.0001756314,0.000011556176,0.005073447,2.2364922e-7,0.00006768021,0.00013320087,0.9928181,0.000093164505],"about_ca_topic_score_codex":0.00050527573,"about_ca_topic_score_gemma":0.00075918424,"teacher_disagreement_score":0.026675304,"about_ca_system_score_codex":0.000007211893,"about_ca_system_score_gemma":0.00016088116,"threshold_uncertainty_score":0.9983056},"labels":[],"label_agreement":null},{"id":"W6927018318","doi":"10.25904/1912/4756","title":"Culture for Climate: A preliminary study into how Australian performing arts organisations are responding to the global environmental crisis","year":2023,"lang":"en","type":"other","venue":"Griffith Research Online (Griffith University, Queensland, Australia)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Performing arts; Context (archaeology); Sustainability; The arts; Best practice; Action (physics); Climate change; Action research; Public sector; Training (meteorology)","score_opus":0.08604313409198838,"score_gpt":0.3655865871880911,"score_spread":0.27954345309610273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927018318","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.928213,0.00036173762,0.00006998641,0.025911478,0.0038686492,0.010305625,0.028363442,0.001361042,0.0015450243],"genre_scores_gemma":[0.32965842,0.00038931728,0.00033864184,0.00003730151,0.0009682045,0.000076671124,0.001998898,0.0004073773,0.6661252],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962008,0.0007162079,0.00035467854,0.0011400655,0.0002364078,0.0013518471],"domain_scores_gemma":[0.9981664,0.00022958925,0.00029972248,0.0009068882,0.00019302031,0.00020437982],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00086532586,0.00065073796,0.0007164895,0.0013591304,0.0018023937,0.00018957007,0.0010612363,0.0010099387,0.0011090022],"category_scores_gemma":[0.00018055613,0.00052458775,0.00027041757,0.0017306942,0.0002718145,0.00020081445,0.00090564456,0.0013637174,0.00073036057],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012288676,0.0009562824,0.04026313,0.00015714226,0.0008844723,0.00007950879,0.0017982319,0.000016602633,0.0010908345,0.00021907891,0.95285994,0.0004459122],"study_design_scores_gemma":[0.002205207,0.0018552995,0.06204873,0.00028879454,0.00034143377,0.00005606069,0.048391942,0.0000015361236,0.00009881164,0.000016901782,0.8840833,0.0006120065],"about_ca_topic_score_codex":0.0040264055,"about_ca_topic_score_gemma":0.034752507,"teacher_disagreement_score":0.66458017,"about_ca_system_score_codex":0.0007594714,"about_ca_system_score_gemma":0.00015344935,"threshold_uncertainty_score":0.99980414},"labels":[],"label_agreement":null},{"id":"W6927031475","doi":"10.25549/wpacards-m99481","title":"WPA block face card for household census of 9th, Francisco, Olympic, Georgia Streets, in Los Angeles","year":2012,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Census; Block (permutation group theory); Face (sociological concept); Quarter (Canadian coin)","score_opus":0.011006526458966277,"score_gpt":0.17690202436366698,"score_spread":0.1658954979047007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927031475","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06397298,0.00076635316,0.0000044605013,0.000018444705,0.00020709963,0.00026853374,0.9346214,0.000040673825,0.00010007898],"genre_scores_gemma":[0.01559241,0.000061897874,0.000019132092,0.000008887521,0.000065098495,7.099021e-7,0.9836318,0.00002903125,0.000591016],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990478,0.000051239545,0.00029639367,0.00026705288,0.00002827035,0.0003092139],"domain_scores_gemma":[0.9991738,0.000110393,0.0003097101,0.00033141184,0.000032709442,0.00004194814],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00004609249,0.00027579538,0.0005670654,0.0002330333,0.00007935077,0.000018423823,0.000371175,0.00059100194,0.00027587978],"category_scores_gemma":[0.000015480628,0.00027587105,0.00021814193,0.00012905285,0.00020085744,0.00018630121,0.00024704463,0.00023859242,0.00024336194],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044792416,0.0003225137,0.0044706366,0.00025989243,0.00020108522,0.0000034581492,0.00002742364,0.0000043821883,0.0008004809,0.0000029605924,0.9928336,0.00062565506],"study_design_scores_gemma":[0.0010812911,0.00007431705,0.00012531754,0.00012253369,0.00011229275,0.000008689979,0.00059289084,3.219156e-7,0.00063723355,0.00001776276,0.99696785,0.0002594819],"about_ca_topic_score_codex":0.0003544875,"about_ca_topic_score_gemma":0.00009585749,"teacher_disagreement_score":0.04901044,"about_ca_system_score_codex":0.000025889996,"about_ca_system_score_gemma":0.00010641474,"threshold_uncertainty_score":0.99996936},"labels":[],"label_agreement":null},{"id":"W6927064277","doi":"10.25949/21606354.v1","title":"The Ethics of Climate Change","year":2022,"lang":"en","type":"dissertation","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Climate change; Perspective (graphical); Political economy of climate change; Business ethics; Applied ethics; Global warming","score_opus":0.07008031145631569,"score_gpt":0.33248217175234396,"score_spread":0.2624018602960283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927064277","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011844644,0.024967927,5.1212417e-9,0.00032340304,0.0075179623,0.0008352825,0.92528033,0.0001254276,0.029105034],"genre_scores_gemma":[0.021416433,0.0012274714,4.7596666e-7,0.000040692543,0.00012257784,0.0009089474,0.96859574,0.000027312217,0.007660345],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99944067,0.00011911853,0.00016539486,0.00011493,0.000012929945,0.00014693242],"domain_scores_gemma":[0.9992154,0.00026788577,0.00021642895,0.00018844218,0.00010732927,0.00000447316],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007493204,0.00010487526,0.00014594178,0.000038950646,0.0004944382,0.000012005342,0.0001783097,0.00038542988,0.38832745],"category_scores_gemma":[0.00037907792,0.00007619224,0.00009350809,0.000078094476,0.000003834265,0.000026499414,0.000060877996,0.00067167333,0.0010058339],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000403398,0.00013950616,0.0000436412,0.001715085,0.00041451177,0.0000017251779,0.0047453293,3.4880625e-7,0.019459324,0.0016577048,0.8960536,0.07536581],"study_design_scores_gemma":[0.00010040663,0.000053302298,0.0030662988,0.00037480748,0.000018979987,0.0000039274373,0.0003954506,7.880997e-8,0.0031056993,0.000017400274,0.9927772,0.00008643012],"about_ca_topic_score_codex":0.000044370026,"about_ca_topic_score_gemma":0.00033277294,"teacher_disagreement_score":0.38732162,"about_ca_system_score_codex":0.000011080944,"about_ca_system_score_gemma":0.00004973872,"threshold_uncertainty_score":0.999772},"labels":[],"label_agreement":null},{"id":"W6927171641","doi":"10.25549/wpacards-m84329","title":"WPA block face card for household census of Caswell, Barbara Streets, in Los Angeles County","year":2012,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Census; Block (permutation group theory); Face (sociological concept); Quarter (Canadian coin)","score_opus":0.012191013526369178,"score_gpt":0.17772620506427186,"score_spread":0.1655351915379027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927171641","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06945805,0.00059275917,0.000001979606,0.00001590083,0.0001404033,0.00024706378,0.9294004,0.000035028268,0.000108449494],"genre_scores_gemma":[0.02190491,0.00008760612,0.000011079774,0.000009170602,0.0000547238,5.422249e-7,0.97764564,0.000025239831,0.00026109826],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991268,0.000047921705,0.00027300973,0.00024468606,0.000027188986,0.00028037213],"domain_scores_gemma":[0.99923664,0.00010460263,0.0002842034,0.00030000068,0.000035184905,0.000039368882],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00004705277,0.00025582756,0.0005182675,0.0001974764,0.000073932126,0.000017971264,0.00032784507,0.00054114236,0.00013842633],"category_scores_gemma":[0.000013527105,0.00025546885,0.00021233849,0.00011650275,0.00019807996,0.0001747601,0.00021217822,0.000235148,0.00011358058],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004015188,0.0002776229,0.004016095,0.00023352292,0.00015600384,0.0000036349393,0.000012049906,0.0000049503883,0.0003471322,0.000002894326,0.9943043,0.00024027778],"study_design_scores_gemma":[0.0008468597,0.000058440637,0.00010714999,0.000106209525,0.000114414135,0.000010209452,0.00064077927,4.590126e-7,0.00041511861,0.000011923695,0.99744886,0.00023955236],"about_ca_topic_score_codex":0.00046712335,"about_ca_topic_score_gemma":0.00008759226,"teacher_disagreement_score":0.048245266,"about_ca_system_score_codex":0.000026060043,"about_ca_system_score_gemma":0.00008679094,"threshold_uncertainty_score":0.99998975},"labels":[],"label_agreement":null},{"id":"W6927179641","doi":"10.3389/fneur.2024.1444873.s002","title":"Table 1_Effect of acupuncture on the gait disturbance and hemodynamic changes in the prefrontal cortex: a study protocol for a randomized controlled trial.docx","year":2025,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Hemodynamics; Gait; Acupuncture; Randomized controlled trial; Cognition; Gait Disturbance; Effects of sleep deprivation on cognitive performance","score_opus":0.01807312802332052,"score_gpt":0.29981940731585977,"score_spread":0.28174627929253926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927179641","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015989723,0.00009885715,7.016226e-8,0.00006878261,0.00015571948,0.35659435,0.6428918,0.000007928482,0.00002259949],"genre_scores_gemma":[0.00027826527,0.0000023501773,1.9072851e-7,0.000053630774,0.000045613593,0.48665574,0.51270884,0.000004536597,0.0002508472],"study_design_codex":"not_applicable","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99770933,0.0012419298,0.00045045055,0.00034315046,0.000031833002,0.00022330447],"domain_scores_gemma":[0.9941842,0.0047300383,0.0004930126,0.00050393306,0.00008184482,0.0000069704474],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006145992,0.0004336857,0.0018864456,0.00010453586,0.00018369828,0.000051552906,0.0003904147,0.00036403813,0.010441343],"category_scores_gemma":[0.0024842727,0.00015541475,0.00029125274,0.00013533863,0.000030533534,0.000026191512,0.00011781609,0.00043697015,0.000010809418],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.36891967,0.0003809279,3.35817e-7,0.00028630925,0.00032574462,4.9732404e-7,0.00003914601,2.3574566e-7,0.000075117285,0.0000023752623,0.62994057,0.000029081077],"study_design_scores_gemma":[0.5274686,0.0009836007,0.000047867667,0.00091038214,0.00021210963,0.0000031358036,0.000039896848,0.0000038365056,0.000021819085,0.000007781109,0.47018856,0.0001124062],"about_ca_topic_score_codex":0.00012791195,"about_ca_topic_score_gemma":0.0013340862,"teacher_disagreement_score":0.15975198,"about_ca_system_score_codex":0.000020407038,"about_ca_system_score_gemma":0.00009354448,"threshold_uncertainty_score":0.99046326},"labels":[],"label_agreement":null},{"id":"W6927191001","doi":"10.3389/fnut.2023.1336509.s001","title":"Data_Sheet_1_Promoting healthy eating in early pregnancy in individuals at risk of gestational diabetes mellitus: does it improve glucose homeostasis? A study protocol for a randomized control trial.docx","year":2024,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gestational diabetes; Pregnancy; Randomized controlled trial; Glycemic; Motivational interviewing; Diabetes mellitus; Intervention (counseling); Prenatal care; Glucose homeostasis","score_opus":0.027608144058443442,"score_gpt":0.32493334600861645,"score_spread":0.29732520195017303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927191001","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0070845895,0.0009889053,8.767132e-8,0.000022196964,0.00029467698,0.23628777,0.75529295,0.000027245022,0.0000015643891],"genre_scores_gemma":[0.0004735097,0.000025240191,0.0000086954615,0.000011222536,0.000070213675,0.43758595,0.5617861,0.000024921197,0.000014161292],"study_design_codex":"not_applicable","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9951883,0.0015313794,0.0018359907,0.00080356473,0.00006753512,0.00057321374],"domain_scores_gemma":[0.9941667,0.0036558625,0.0014648961,0.0005064995,0.00017355682,0.00003251941],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001285486,0.00051994325,0.0018447113,0.00058042596,0.00017016957,0.000108156695,0.00041486527,0.0006191613,0.01798759],"category_scores_gemma":[0.005676916,0.00037396172,0.00030098998,0.00031937406,0.000029976314,0.00022731692,0.00034546776,0.00079161447,0.00037999536],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.10958046,0.0022266167,0.0007761284,0.006718895,0.0013750062,0.000004633045,0.0009011505,0.0000029927846,0.0001420528,0.000001121764,0.8760735,0.002197488],"study_design_scores_gemma":[0.7196506,0.0023208186,0.0005718762,0.015857339,0.00032292548,0.0000014272027,0.00013651096,0.000009398411,0.0003244874,0.000060223665,0.26025194,0.0004924021],"about_ca_topic_score_codex":0.0005285662,"about_ca_topic_score_gemma":0.0020808282,"teacher_disagreement_score":0.61582154,"about_ca_system_score_codex":0.00012268077,"about_ca_system_score_gemma":0.0002885529,"threshold_uncertainty_score":0.99987125},"labels":[],"label_agreement":null},{"id":"W6927270189","doi":"10.3204/pubdb-2020-00738","title":"Invisible and displaced dark matter signatures at Belle II","year":2020,"lang":"en","type":"article","venue":"DESY Publication Database (PUBDB) (Deutsches Elektronen-Synchrotron)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Science and Technology Facilities Council; Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Dark matter; Vertex (graph theory); Parameter space; Weakly interacting massive particles; Dark energy; Sensitivity (control systems); Signature (topology); Photon","score_opus":0.016233327306128666,"score_gpt":0.23291312771462988,"score_spread":0.2166798004085012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927270189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981664,0.0017623722,0.0005200883,0.012553419,0.00036676318,0.001098374,0.000860454,0.00030841265,0.0008661207],"genre_scores_gemma":[0.98759717,0.00009311087,0.00037633113,0.001911401,0.000219412,0.00037829997,0.006591059,0.00006832536,0.0027648832],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99725884,0.0003132736,0.0006391743,0.0010256122,0.00007751139,0.0006856064],"domain_scores_gemma":[0.9982229,0.00015223306,0.0003144577,0.0008952724,0.0002231498,0.00019200669],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00035534406,0.00048342397,0.0005192883,0.0002415579,0.0031640918,0.000101575846,0.00047022593,0.00032840914,0.0050907847],"category_scores_gemma":[0.00023299949,0.0004440231,0.00011736566,0.0005085644,0.00020555277,0.0012230902,0.0024153062,0.00054573576,0.001137614],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004000398,0.0004937986,0.031394385,0.00007163564,0.00030108797,0.0000016472881,0.0012758287,0.000004656085,0.71589345,0.001127814,0.24822664,0.00080900145],"study_design_scores_gemma":[0.0037348121,0.00056624535,0.04403325,0.000029029861,0.00019697403,0.000061867715,0.00022061482,0.00007605583,0.050591256,0.000040154362,0.8996794,0.00077032397],"about_ca_topic_score_codex":0.00025523262,"about_ca_topic_score_gemma":0.00015485691,"teacher_disagreement_score":0.6653022,"about_ca_system_score_codex":0.000094098985,"about_ca_system_score_gemma":0.00008654187,"threshold_uncertainty_score":0.99980116},"labels":[],"label_agreement":null},{"id":"W6927305297","doi":"10.3389/fvets.2018.00100.s002","title":"Table2_Herd-Level Mastitis-Associated Costs on Canadian Dairy Farms.pdf","year":2018,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Milking; Mastitis; Total cost; Herd; Somatic cell count; Dairy industry; Economic cost; Dairy cattle; Economic impact analysis","score_opus":0.040123136005804465,"score_gpt":0.2575571471288115,"score_spread":0.21743401112300703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927305297","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000061357176,0.0002126324,6.7648536e-9,0.000054709115,0.0024682444,0.0003197387,0.99509835,0.000061689716,0.0017232449],"genre_scores_gemma":[0.00028503707,0.000025758145,6.6131423e-7,0.00052149355,0.00035020593,0.00017170444,0.9924198,0.00003254432,0.006192794],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984626,0.00014226796,0.0002871472,0.00044368574,0.000024420166,0.00063984975],"domain_scores_gemma":[0.9987908,0.00012831316,0.00021459741,0.00054284843,0.00022599388,0.00009744679],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000055904962,0.00040160536,0.00043493905,0.0002804343,0.0004540193,0.00007629986,0.00043823672,0.0014582921,0.84824675],"category_scores_gemma":[0.00080801215,0.0003881488,0.00011936808,0.00019564398,0.00001993016,0.000066908724,0.00012225348,0.0007190281,0.18366653],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001704722,0.00006681385,0.000006478165,0.000043885644,0.00019690189,0.000012840814,0.0000035742175,1.2133701e-7,0.000067436704,0.0000013657908,0.9993489,0.00023467181],"study_design_scores_gemma":[0.00056987215,0.00021318778,0.0016305007,0.0015322402,0.00004650111,0.00003680628,0.0000045896863,9.502779e-8,0.0002267548,0.0000019462125,0.9953183,0.00041918966],"about_ca_topic_score_codex":0.104567245,"about_ca_topic_score_gemma":0.5541141,"teacher_disagreement_score":0.66458017,"about_ca_system_score_codex":0.00044312232,"about_ca_system_score_gemma":0.00054498046,"threshold_uncertainty_score":0.99985707},"labels":[],"label_agreement":null},{"id":"W6927344256","doi":"10.26008/1912/bco-dmo.842972.1","title":"CTD profiles acquired in Puget Sound, WA aboard R/V Clifford A. Barnes during cruises CB1073 and CB1078 in 2017.","year":2021,"lang":"en","type":"dataset","venue":"Open Access Server of the Woods Hole Scientific Community (Woods Hole Scientific Community)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Division of Ocean Sciences","keywords":"Nucleofection; Gestational period; TSG101; Diafiltration; Dysgeusia; Liquation; Triacetin; Fusible alloy; Proteogenomics","score_opus":0.09128128759183061,"score_gpt":0.3562841287337832,"score_spread":0.26500284114195255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927344256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7674319,0.0010690545,5.6370146e-7,0.00031454914,0.006751896,0.0017619296,0.22224997,0.000049194437,0.00037095087],"genre_scores_gemma":[0.6134473,0.0002808794,0.000032386208,0.00007116991,0.000053740227,0.00028669956,0.37876156,0.00007721772,0.0069890283],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9829579,0.011700221,0.002195525,0.0013477891,0.00034896386,0.0014495936],"domain_scores_gemma":[0.98652107,0.0009710122,0.0015010209,0.0100744525,0.0007631978,0.00016924029],"candidate_categories":["metaepi_narrow","sts","scholarly_communication","open_science","research_integrity","insufficient_payload"],"consensus_categories":["sts","open_science"],"category_scores_codex":[0.010136173,0.0011480275,0.002083561,0.0023907162,0.008952308,0.008542743,0.019566309,0.001072534,0.0014144846],"category_scores_gemma":[0.0011765347,0.0010013863,0.00048944156,0.0061388807,0.0045245485,0.0031733494,0.03709357,0.0045647603,0.00009293444],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000730286,0.009273885,0.0230464,0.003038386,0.00066069694,0.000021275348,0.0050652386,0.00040777127,0.051325,0.0001509113,0.90495545,0.0013246811],"study_design_scores_gemma":[0.0075355805,0.00027233624,0.07620733,0.004180541,0.0004463692,0.00012007,0.010236924,0.000026274092,0.043805577,0.0032143127,0.85133576,0.0026188968],"about_ca_topic_score_codex":0.043449,"about_ca_topic_score_gemma":0.22928104,"teacher_disagreement_score":0.18583204,"about_ca_system_score_codex":0.00032221075,"about_ca_system_score_gemma":0.0007839,"threshold_uncertainty_score":0.99949837},"labels":[],"label_agreement":null},{"id":"W6927365621","doi":"10.3389/fnetp.2021.754477.s002","title":"Table2_Comparison of Gait Speed Reserve, Usual Gait Speed, and Maximum Gait Speed of Adults Aged 50+ in Ireland Using Explainable Machine Learning.DOCX","year":2021,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gait; Standard deviation; Feature selection; Histogram; Stepwise regression; Feature (linguistics); Cognition; Logistic regression","score_opus":0.03824121711692306,"score_gpt":0.27603817533239133,"score_spread":0.23779695821546826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927365621","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17277288,0.004177253,1.3863244e-7,0.000012451093,0.00034499922,0.00040670496,0.8221662,0.000024723766,0.000094612304],"genre_scores_gemma":[0.010758575,0.0003015111,0.000023491793,0.000014644523,0.000119348704,0.000011785401,0.98787284,0.00004778788,0.0008499979],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99716306,0.0004870622,0.00097641366,0.0007022795,0.000074296055,0.0005968665],"domain_scores_gemma":[0.9979059,0.0002818239,0.0008582976,0.0006400221,0.00025507718,0.000058870763],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000230862,0.00055918423,0.001389964,0.00045673223,0.00019759055,0.000059317856,0.00040631715,0.0010108758,0.1451403],"category_scores_gemma":[0.0010063815,0.0005559544,0.00018997489,0.0005230403,0.000051302937,0.00019608848,0.00075127126,0.0012898443,0.00023089488],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075164106,0.0003519008,0.0024129276,0.0015437396,0.00022810281,0.000043534197,0.00007713847,0.00015872165,0.015034218,3.609691e-7,0.97931504,0.00008266512],"study_design_scores_gemma":[0.004191908,0.00048347152,0.0052599204,0.0057353047,0.0001575212,0.00020204403,0.00020694699,0.00012373753,0.006924954,0.000007709739,0.9760239,0.00068255194],"about_ca_topic_score_codex":0.009730295,"about_ca_topic_score_gemma":0.0028385366,"teacher_disagreement_score":0.16570662,"about_ca_system_score_codex":0.000076546465,"about_ca_system_score_gemma":0.00015340111,"threshold_uncertainty_score":0.9996892},"labels":[],"label_agreement":null},{"id":"W6927396308","doi":"10.3389/fenvs.2024.1353802.s001","title":"Table1_Soil carbon dynamics in drained prairie pothole wetlands.DOCX","year":2024,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Soil carbon; Wetland; Soil organic matter; Histosol; Hydrology (agriculture); Carbon sequestration; Ecosystem; Soil biodiversity; Drainage","score_opus":0.014921264957299119,"score_gpt":0.2519678432388738,"score_spread":0.23704657828157466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927396308","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012483292,0.0012864118,7.1724573e-9,0.00018492354,0.0016345547,0.00026425882,0.995425,0.00010475114,0.0009752847],"genre_scores_gemma":[0.00038284363,0.000026760614,9.700902e-7,0.000055828983,0.00023526391,0.00027922998,0.99624205,0.000035938352,0.0027411226],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986736,0.000095772935,0.00034705782,0.00046102103,0.000019288693,0.00040322187],"domain_scores_gemma":[0.99920523,0.000087973414,0.0001303232,0.0004906802,0.00006269597,0.00002307696],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000061262486,0.0003643938,0.00045982533,0.00031352913,0.000075067066,0.00007819843,0.0003095865,0.0010480724,0.13599338],"category_scores_gemma":[0.000345212,0.00032999038,0.00011932353,0.00031668282,0.000012532441,0.000060400605,0.0002867039,0.0009609698,0.026954284],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022841616,0.00006356545,0.000015345757,0.00039402777,0.00008403684,0.000026859461,0.000009094737,0.0000010408314,0.00012226544,0.0000037647794,0.99912417,0.00013300231],"study_design_scores_gemma":[0.0004192598,0.00007681115,0.00014659869,0.0015927511,0.00005182055,0.00007194647,0.000024191962,0.000011006061,0.000073600655,0.00002341291,0.99715257,0.00035601042],"about_ca_topic_score_codex":0.00074479444,"about_ca_topic_score_gemma":0.012726723,"teacher_disagreement_score":0.10903909,"about_ca_system_score_codex":0.0001889236,"about_ca_system_score_gemma":0.00017797064,"threshold_uncertainty_score":0.99991524},"labels":[],"label_agreement":null},{"id":"W6927491633","doi":"10.34675/l39315","title":"Exclusive option to acquire 80% interest in mineral claims located in the Sudbury Mining District, Ontario, Canada, with formation of joint venture to explore, develop and operate the property for ores, metals, minerals and any concentrates therefrom.","year":2022,"lang":"en","type":"article","venue":"RoyaltyStat Library","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Joint venture; Joint (building); Property (philosophy); Venture capital; Real property","score_opus":0.03688774266223792,"score_gpt":0.2230727081048815,"score_spread":0.18618496544264357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927491633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99605364,0.0005832231,0.0000376315,0.0020586788,0.00013144963,0.000916603,0.00018424369,0.000007987837,0.000026564996],"genre_scores_gemma":[0.99786407,0.000021493084,0.00008916614,0.00044249723,0.00001286696,0.00031563468,0.0006052409,0.0000115329685,0.0006374758],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991144,0.00021059431,0.0002815928,0.00017542882,0.000019834384,0.00019815892],"domain_scores_gemma":[0.99969125,0.000069217494,0.000082148275,0.00010943365,0.00002702898,0.000020916435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013778509,0.00013539488,0.00021185122,0.00007449235,0.0001805691,0.000041989984,0.00012192665,0.000041464795,0.00006745626],"category_scores_gemma":[0.000013136757,0.000067196466,0.000013357854,0.00025399934,0.000029940682,0.00024284153,0.00013498425,0.00012601852,1.7698915e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010359124,0.0007327867,0.15560189,0.00051193195,0.0005556301,0.000057972917,0.1381606,0.0045407903,0.55585414,0.0023410916,0.12016904,0.011115035],"study_design_scores_gemma":[0.0058740093,0.0027821374,0.7498799,0.0005025237,0.00010424581,0.00028127254,0.07383969,0.00059068075,0.047609143,0.00011038819,0.11760578,0.0008202229],"about_ca_topic_score_codex":0.107328944,"about_ca_topic_score_gemma":0.39546475,"teacher_disagreement_score":0.59427804,"about_ca_system_score_codex":0.0000596129,"about_ca_system_score_gemma":0.00022920524,"threshold_uncertainty_score":0.8986154},"labels":[],"label_agreement":null},{"id":"W6927498695","doi":"10.3389/fenvs.2025.1513704.s001","title":"Data Sheet 1_Agricultural nitrate attenuation in a small groundwater-influenced wetland system.pdf","year":2025,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nitrate; Wetland; Hydrology (agriculture); Groundwater; Sink (geography); Riparian zone; Surface water; Surface runoff","score_opus":0.03906686676977119,"score_gpt":0.26349982894998825,"score_spread":0.22443296218021705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927498695","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00193054,0.0003205827,8.440818e-8,0.000035631474,0.00095034816,0.0004989311,0.9960655,0.00006547417,0.0001329158],"genre_scores_gemma":[0.00067399675,0.000026836708,0.0000020992645,0.000047525446,0.0001794605,0.00027658234,0.9977906,0.000006529932,0.000996416],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984103,0.00020485486,0.00045695537,0.0005761122,0.000016567297,0.00033525436],"domain_scores_gemma":[0.9986353,0.000122002144,0.00023021664,0.0008723437,0.00012085889,0.00001930693],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008784698,0.0003439835,0.00046480558,0.00019622018,0.00015561761,0.00012297506,0.0008113201,0.0007794665,0.06552661],"category_scores_gemma":[0.00025285056,0.0002597573,0.00006712362,0.00026917557,0.000008123799,0.00020687013,0.0005570227,0.0005409148,0.0053566],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029237066,0.000059017577,0.000023729152,0.00066146115,0.00009847936,0.000007957116,0.000005410897,0.0000017474754,0.0016863985,8.697906e-7,0.9973235,0.00010216428],"study_design_scores_gemma":[0.0006836125,0.00005117641,0.002017983,0.0034999654,0.000071322334,0.000068574016,0.000031380416,0.0000020675652,0.000200764,9.27523e-7,0.99305737,0.00031488025],"about_ca_topic_score_codex":0.0017176386,"about_ca_topic_score_gemma":0.008045054,"teacher_disagreement_score":0.06017001,"about_ca_system_score_codex":0.00010051717,"about_ca_system_score_gemma":0.00011445516,"threshold_uncertainty_score":0.99998546},"labels":[],"label_agreement":null},{"id":"W6927528362","doi":"10.3389/fmed.2022.849541.s001","title":"Table_1_Effects of Virtual Reality Education on Procedural Pain and Anxiety During Venipuncture in Children: A Randomized Clinical Trial.DOCX","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Venipuncture; Anxiety; Randomized controlled trial; Phlebotomy; Virtual reality; Clinical trial","score_opus":0.02147648010457806,"score_gpt":0.30589631119121574,"score_spread":0.2844198310866377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927528362","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.051717963,0.00059682573,1.8769486e-8,0.00003381977,0.0007606387,0.0019922405,0.94486964,0.000021662176,0.0000072026364],"genre_scores_gemma":[0.012073743,0.0001529606,4.6717344e-7,0.00010199794,0.00023534984,0.0012796038,0.9860682,0.000015042414,0.000072621464],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99599236,0.0025889177,0.0007154776,0.0004606902,0.000029956285,0.00021261559],"domain_scores_gemma":[0.9980144,0.0009881078,0.00054154586,0.00037518027,0.00005574574,0.000025013162],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011768371,0.0002939611,0.001041609,0.0001805169,0.00013110701,0.000020280791,0.00018891915,0.00066533725,0.17265612],"category_scores_gemma":[0.0063753976,0.00023765326,0.00023938493,0.00017214927,0.00002984428,0.00005569411,0.00018191853,0.00093941553,0.00005683664],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07786171,0.000505072,0.000033071115,0.00026086246,0.0001432809,3.7279187e-7,0.000012942869,0.0000022454194,0.00006644849,0.0000012326773,0.91959447,0.0015183153],"study_design_scores_gemma":[0.18766503,0.0008751513,0.0028833607,0.0009992592,0.00010440658,0.000045344077,0.000016923474,6.676859e-7,0.00011767192,0.0000063285943,0.806985,0.000300808],"about_ca_topic_score_codex":0.00027091592,"about_ca_topic_score_gemma":0.00007005824,"teacher_disagreement_score":0.17259929,"about_ca_system_score_codex":0.00005087889,"about_ca_system_score_gemma":0.0003010038,"threshold_uncertainty_score":0.96912193},"labels":[],"label_agreement":null},{"id":"W6927563685","doi":"10.3389/fnut.2023.1222536.s001","title":"Data_Sheet_1_The effect of breakfast on childhood obesity: a systematic review and meta-analysis.pdf","year":2023,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Overweight; Obesity; Observational study; Confidence interval; Odds ratio; Childhood obesity; Cohort study","score_opus":0.03348041020115465,"score_gpt":0.2844554811728713,"score_spread":0.2509750709717166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927563685","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000006986804,0.032447387,1.381153e-8,0.000027480673,0.00008943331,0.0013772845,0.96599716,0.00003827786,0.00001594679],"genre_scores_gemma":[0.00002979793,0.00080333743,1.9648262e-7,0.00015104708,0.000020929692,0.00079939765,0.9974147,0.000018715833,0.00076189876],"study_design_codex":"not_applicable","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9980294,0.0007073765,0.00058150396,0.00044223486,0.000032009626,0.00020748886],"domain_scores_gemma":[0.99750537,0.0006689957,0.00059324346,0.0011390466,0.00006956017,0.000023796398],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00028374276,0.00042334394,0.0037827,0.0002955836,0.000104062376,0.00003136321,0.00040054007,0.00040247093,0.23868872],"category_scores_gemma":[0.0012290373,0.00026065359,0.0009363993,0.0005048507,0.000011297133,0.00005200713,0.00028768342,0.0003762004,0.04007919],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000039811052,0.000053607575,1.18480045e-7,0.14469731,0.08142737,0.0000016143152,0.0000012361905,1.1214698e-7,0.000005160656,2.4630654e-7,0.7738083,9.662202e-7],"study_design_scores_gemma":[0.00020070084,0.00026020908,0.00006361428,0.017033927,0.61905736,0.00004571556,0.0000010649003,3.512374e-8,0.00008482007,5.3154827e-7,0.3629989,0.00025309427],"about_ca_topic_score_codex":0.00013364908,"about_ca_topic_score_gemma":0.00010741133,"teacher_disagreement_score":0.53763,"about_ca_system_score_codex":0.000012561082,"about_ca_system_score_gemma":0.00002307559,"threshold_uncertainty_score":0.99998456},"labels":[],"label_agreement":null},{"id":"W6927644905","doi":"10.3389/fpubh.2021.779090.s001","title":"Data_Sheet_1_Role of the Media in Health-Related Awareness Campaigns on Perception of COVID-19: A Pre-post Study in the General Population of Pakistan.PDF","year":2021,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarter (Canadian coin); Preparedness; Perception; Public health; Population; Isolation (microbiology); General knowledge; Health education","score_opus":0.04321174079617328,"score_gpt":0.345446878585576,"score_spread":0.3022351377894027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927644905","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27494603,0.00012207308,2.5382816e-8,0.000048486556,0.00023707902,0.00062221603,0.72401845,0.0000033347912,0.000002282022],"genre_scores_gemma":[0.23883939,0.00001692546,4.7550935e-7,0.000060663697,0.000020935613,0.00010000473,0.76093996,0.000006582735,0.000015090474],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9973922,0.0012695356,0.00085341925,0.00027020156,0.000053981366,0.00016067374],"domain_scores_gemma":[0.9982264,0.0002843083,0.00070064113,0.00068019837,0.000094338226,0.000014128807],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034753067,0.00018691517,0.0005221508,0.00019663082,0.00008763638,0.000008627065,0.0004261393,0.00036856468,0.056994617],"category_scores_gemma":[0.00093956763,0.000121374615,0.000092837414,0.0004344209,0.000018820276,0.000052129777,0.00015575936,0.00043156336,0.000038394122],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022418877,0.0011413792,0.004789004,0.0008773255,0.00007972813,0.000002219233,0.0021572234,0.00017475222,0.0016511177,0.0000033936262,0.988792,0.00010767666],"study_design_scores_gemma":[0.0022900326,0.00072083203,0.76851517,0.0026218155,0.00006471306,0.000024670255,0.0045715314,0.0000041446183,0.00013100187,0.000009788353,0.22078986,0.0002564483],"about_ca_topic_score_codex":0.027019696,"about_ca_topic_score_gemma":0.05674504,"teacher_disagreement_score":0.76800215,"about_ca_system_score_codex":0.00010224912,"about_ca_system_score_gemma":0.00038177363,"threshold_uncertainty_score":0.97945946},"labels":[],"label_agreement":null},{"id":"W6927645931","doi":"10.34943/f0297458-1e00-4132-9314-651599b4c8f4","title":"Patricia Bay pH Sensor Deployed 2014-01-29","year":2014,"lang":"en","type":"dataset","venue":"Ocean Networks Canada Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bay; Seawater; Software deployment; Water quality; Ocean chemistry","score_opus":0.005419340434873757,"score_gpt":0.19759664054919496,"score_spread":0.19217730011432121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927645931","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017694832,0.0025868611,0.00009714916,0.00033644802,0.010512286,0.0003482206,0.98421574,0.000113579255,0.000020249892],"genre_scores_gemma":[0.002919732,0.0019810083,0.000022161046,0.0017981546,0.0016601554,0.000010911918,0.9903144,0.00006368375,0.0012297872],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99771863,0.00026003874,0.0005268145,0.00061468704,0.000050003695,0.0008298346],"domain_scores_gemma":[0.9982721,0.0003462653,0.00038031448,0.0007935071,0.00011806484,0.00008972205],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026482664,0.0005834443,0.0007684224,0.000037945654,0.0005850125,0.00005564211,0.0004456211,0.0014107263,0.001118195],"category_scores_gemma":[0.00004192564,0.0005274027,0.00041820956,0.00020852368,0.00011472903,0.000048669834,0.00016085214,0.0013333871,0.000037201684],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024494464,0.00004553373,0.00017499979,0.00004807903,0.0005622219,0.0000035801822,0.0000066120892,0.00014159562,0.00006341158,0.0000029716134,0.99862546,0.000301066],"study_design_scores_gemma":[0.00076313573,0.00006046143,0.00031689517,0.000036765,0.0002963128,0.00005018111,0.000039064464,0.00003608307,0.000024223165,0.0000025989914,0.99780065,0.00057363295],"about_ca_topic_score_codex":0.44272748,"about_ca_topic_score_gemma":0.6315503,"teacher_disagreement_score":0.18882282,"about_ca_system_score_codex":0.0002687086,"about_ca_system_score_gemma":0.0005359566,"threshold_uncertainty_score":0.9998857},"labels":[],"label_agreement":null},{"id":"W6927662550","doi":"10.3389/fmars.2022.863693.s001","title":"DataSheet_1_Climate-Change Refugia for the Bubblegum Coral Paragorgia arborea in the Northwest Atlantic.docx","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bioregion; Habitat; Context (archaeology); Fishing; Ecosystem; Generalized additive model; Species distribution; Coral","score_opus":0.07552914370067315,"score_gpt":0.30177470279442226,"score_spread":0.2262455590937491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927662550","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018269109,0.0013817986,2.5849529e-8,0.00032033547,0.0013629376,0.0013436173,0.9953558,0.000033638127,0.000019179777],"genre_scores_gemma":[0.0004373016,0.00022269548,7.5603464e-7,0.0005081684,0.0003752945,0.0045356955,0.9938109,0.000027015922,0.000082154045],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984469,0.0002283263,0.00037076935,0.00043409684,0.00003659368,0.00048331372],"domain_scores_gemma":[0.9977079,0.0008530565,0.00027468725,0.0010872063,0.00006236948,0.000014799732],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021154806,0.0003594066,0.00039762162,0.00011128062,0.0006115034,0.00010301376,0.0012126849,0.0004114013,0.6221374],"category_scores_gemma":[0.00031127638,0.00021172965,0.00017211739,0.00025647305,0.000025302661,0.00011046176,0.00045350604,0.0008888556,0.0018767632],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007877839,0.00011183776,0.00005016966,0.00014844644,0.00009311059,0.000009115092,0.000038296515,6.5230967e-7,0.000018124565,0.000009666041,0.9993018,0.0001400308],"study_design_scores_gemma":[0.0005588769,0.00015941617,0.0042150994,0.00018336433,0.00011781033,0.00010375208,0.00007842992,7.836367e-7,0.000008984242,0.000004080334,0.9942939,0.00027548],"about_ca_topic_score_codex":0.004411679,"about_ca_topic_score_gemma":0.0136803035,"teacher_disagreement_score":0.62026066,"about_ca_system_score_codex":0.00004433225,"about_ca_system_score_gemma":0.0000742116,"threshold_uncertainty_score":0.9989004},"labels":[],"label_agreement":null},{"id":"W6927682421","doi":"10.34943/c4f519a7-79ff-46a1-997f-3f7138c85a19","title":"Juan de Fuca Strait Current Meter Deployed 2021-12-17","year":2023,"lang":"en","type":"dataset","venue":"Ocean Networks Canada Society","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Current meter; Current (fluid); Measure (data warehouse); Acoustic Doppler current profiler; Metre; Mooring; Tilt (camera); Head (geology); Pressure sensor","score_opus":0.012605734918876267,"score_gpt":0.23416033975821096,"score_spread":0.2215546048393347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927682421","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013590148,0.0026772104,0.000036467227,0.0002257232,0.011776206,0.00029250843,0.9835255,0.00009765564,0.000009714352],"genre_scores_gemma":[0.0006085235,0.0040186034,0.000011949828,0.00039508494,0.0013970451,0.00002370414,0.99171287,0.000065589775,0.0017666523],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99784595,0.0001791176,0.00045614835,0.00055461284,0.000048220845,0.00091597246],"domain_scores_gemma":[0.99879754,0.00018631575,0.00024945204,0.0005931625,0.000075996235,0.00009752617],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00026277333,0.0005057599,0.00059598597,0.00003986738,0.0004819903,0.00006557266,0.0004601799,0.00088874885,0.0006553212],"category_scores_gemma":[0.000025590347,0.00047879064,0.00041841308,0.00024537035,0.000101529884,0.00005222452,0.00019708283,0.0014714749,0.000040103176],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001700048,0.000051919968,0.0000697397,0.000055403074,0.00071256794,0.0000050218073,0.000013895796,0.00014255708,0.000064288964,0.0000032694975,0.9977396,0.0011247273],"study_design_scores_gemma":[0.000505067,0.000045898334,0.00064218935,0.00009270089,0.00030354442,0.000024772646,0.000054321612,0.000025322715,0.000016090133,0.000008691185,0.9978003,0.00048112826],"about_ca_topic_score_codex":0.4119343,"about_ca_topic_score_gemma":0.76057816,"teacher_disagreement_score":0.3486439,"about_ca_system_score_codex":0.00041546553,"about_ca_system_score_gemma":0.0011517007,"threshold_uncertainty_score":0.99976635},"labels":[],"label_agreement":null},{"id":"W6927708855","doi":"10.3389/fpsyg.2020.00771.s001","title":"Table_1_Online Validation of a Battery of Questionnaires for the Assessment of Family Functioning and Related Factors.DOCX","year":2020,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Intraclass correlation; Scale (ratio); Anxiety; Interpersonal communication; Depression (economics); Confidence interval; Rating scale","score_opus":0.044013106315667835,"score_gpt":0.30082788066767446,"score_spread":0.2568147743520066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927708855","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023428889,0.00062910595,0.000007994232,0.00003677123,0.00046491754,0.00031301167,0.9961897,0.000010366391,0.000005252793],"genre_scores_gemma":[0.02685697,0.00007341886,0.000011269855,0.0000079851425,0.000035213223,0.00006879429,0.9729101,0.000008061877,0.000028181283],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99928415,0.000073002455,0.0003945336,0.00014981788,0.000017201537,0.0000812798],"domain_scores_gemma":[0.99859405,0.00045793017,0.0005513905,0.00018339977,0.00020578217,0.0000074694535],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006079599,0.00013306508,0.0003314929,0.00007530877,0.00007911758,0.000007961085,0.00010532924,0.000274525,0.015809575],"category_scores_gemma":[0.0005023616,0.00009472617,0.00008723997,0.00010292633,0.000019499857,0.00005429254,0.000078765326,0.00017607474,0.000014318838],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024479408,0.000045702225,0.00008367953,0.0006064659,0.00025486352,5.008244e-8,0.000015896887,0.00001804745,0.0136389565,0.0000031043103,0.9851473,0.00016147572],"study_design_scores_gemma":[0.00051152497,0.00032189582,0.019998549,0.0014429371,0.00023557279,0.000004115306,0.00005576505,0.000011897166,0.0076759397,0.000009395601,0.9696176,0.00011480081],"about_ca_topic_score_codex":0.00014140828,"about_ca_topic_score_gemma":0.000011701915,"teacher_disagreement_score":0.024514081,"about_ca_system_score_codex":0.000010616668,"about_ca_system_score_gemma":0.0000892416,"threshold_uncertainty_score":0.98509014},"labels":[],"label_agreement":null},{"id":"W6927744145","doi":"10.3389/fpsyg.2022.938116.s002","title":"Table_2_Exploring the links between alexithymia and cognitive emotion regulation strategies in internet addiction: A network analysis model.DOCX","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Alexithymia; Cognition; The Internet; Context (archaeology); Addiction; Psychological intervention; Cognitive reappraisal","score_opus":0.040174329960663016,"score_gpt":0.26880135600995275,"score_spread":0.22862702604928975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927744145","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024406458,0.0015698264,0.000017422652,0.000021843984,0.00022841142,0.00028602,0.9953487,0.000037008358,0.000050100174],"genre_scores_gemma":[0.016596442,0.00009491453,0.0000020420844,0.000022589062,0.00026816677,0.00038854202,0.9824429,0.000012356251,0.00017201164],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99880165,0.00025393753,0.00032318756,0.0003583622,0.000026285932,0.00023655711],"domain_scores_gemma":[0.999204,0.0002347241,0.00025601586,0.00023263642,0.000058699487,0.000013947503],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012538389,0.0002336205,0.00037345148,0.0002519061,0.00027216587,0.00010948301,0.00016319013,0.000612247,0.32884824],"category_scores_gemma":[0.000091156864,0.00019588662,0.00010751769,0.00059212116,0.000016851478,0.00021941065,0.0002590921,0.0010982192,0.00013495208],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035743247,0.00001692092,0.00019205338,0.00003798218,0.00066327635,8.613915e-7,0.00009236073,0.0023838894,0.0000052809264,0.0000036569643,0.99573654,0.0008314441],"study_design_scores_gemma":[0.00037129357,0.0000913771,0.030878391,0.001009235,0.0008094238,0.0000082628985,0.00019054231,0.00048557698,0.000015112964,0.00006265905,0.9658026,0.0002755364],"about_ca_topic_score_codex":0.0003618508,"about_ca_topic_score_gemma":0.00068479066,"teacher_disagreement_score":0.32871327,"about_ca_system_score_codex":0.00005208033,"about_ca_system_score_gemma":0.00005922596,"threshold_uncertainty_score":0.7988025},"labels":[],"label_agreement":null},{"id":"W6927792891","doi":"10.3389/frans.2022.934639.s002","title":"Table1_Validating the Use of Amputated Limbs Used as Cadaver Detection Dog Training Aids.XLSX","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cadaver; Context (archaeology); Odor; Training (meteorology); Human anatomy","score_opus":0.11465417551908531,"score_gpt":0.2897138993768892,"score_spread":0.17505972385780388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6927792891","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038709952,0.00019098693,3.243428e-7,0.000011999707,0.00086277846,0.00035522584,0.9946291,0.000066063316,0.000012563836],"genre_scores_gemma":[0.0032513267,0.000017462819,0.0000029855025,0.00007835517,0.000105956926,0.00025097348,0.99583113,0.000029357732,0.00043246243],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985195,0.00037563074,0.0004188159,0.00033711048,0.000038433427,0.000310546],"domain_scores_gemma":[0.9982539,0.00061793224,0.00050231704,0.00048688194,0.00012166148,0.000017312192],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011527853,0.00028600026,0.00040788227,0.00016543128,0.0005346533,0.000080813144,0.0003248041,0.0004717827,0.73009586],"category_scores_gemma":[0.0013607141,0.0002234059,0.00017657073,0.00035084374,0.000018171882,0.00015723339,0.0003131089,0.0008621422,0.0008790884],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003243088,0.000055189885,0.0000014065805,0.00008554426,0.00022195495,0.0000025823522,0.00010625002,0.00007705091,0.008394259,4.127231e-7,0.9894682,0.0015547193],"study_design_scores_gemma":[0.00038616345,0.00031417143,0.00005914651,0.00029835515,0.000098102086,0.000105950094,0.000111675225,0.000002886218,0.004583219,0.0000021895287,0.99380183,0.00023632472],"about_ca_topic_score_codex":0.0015950397,"about_ca_topic_score_gemma":0.00032042878,"teacher_disagreement_score":0.72921675,"about_ca_system_score_codex":0.00005325324,"about_ca_system_score_gemma":0.00013197171,"threshold_uncertainty_score":0.99989885},"labels":[],"label_agreement":null},{"id":"W6929518349","doi":"10.48550/arxiv.astro-ph/0411775","title":"Cosmic Star Formation History and its Dependence on Galaxy Stellar Mass","year":2004,"lang":"en","type":"preprint","venue":"arXiv (Cornell University)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Toronto; Herzberg Institute of Astrophysics","funders":"","keywords":"Star formation; Galaxy; Stellar mass; Galaxy formation and evolution; Redshift; Galaxy merger; COSMIC cancer database; Lenticular galaxy; Peculiar galaxy","score_opus":0.05347572546034357,"score_gpt":0.17795887419799888,"score_spread":0.12448314873765531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929518349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940246,0.0010571053,0.0014924972,0.000027754151,0.0015815136,0.00027550658,0.0000436646,0.000104953455,0.0013924441],"genre_scores_gemma":[0.99553835,0.0012630781,0.000009580883,0.000036424495,0.000033491815,0.0000010418458,0.0001042909,0.000014222799,0.0029994901],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990459,0.0001177299,0.00015364359,0.00045695924,0.000008632024,0.00021711113],"domain_scores_gemma":[0.99934477,0.00004228074,0.00018294143,0.00030681645,0.00009101692,0.000032198197],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000101035395,0.00023196,0.00024992987,0.00020066851,0.0001402182,0.00001408564,0.0002084059,0.00048699597,0.00044159152],"category_scores_gemma":[0.000015979589,0.00025708188,0.00008645682,0.00007042068,0.00006464826,0.0001824724,0.00020821235,0.00051184953,0.0003529393],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037961379,0.0011817184,0.00811741,0.0020151671,0.0021096338,0.00033864751,0.0028222904,0.07258813,0.6904317,0.20359328,0.011059483,0.0019463655],"study_design_scores_gemma":[0.041691985,0.006293909,0.08314836,0.0050466796,0.0037707346,0.0008957381,0.0034391305,0.01720048,0.2959706,0.12141814,0.4080349,0.013089369],"about_ca_topic_score_codex":0.00017002344,"about_ca_topic_score_gemma":0.00006289754,"teacher_disagreement_score":0.3969754,"about_ca_system_score_codex":0.00057046267,"about_ca_system_score_gemma":0.00012872014,"threshold_uncertainty_score":0.99998814},"labels":[],"label_agreement":null},{"id":"W6929678610","doi":"10.5061/dryad.5757d42","title":"Data from: Evidence for contemporary and historical gene flow between guppy populations in different watersheds, with a test for associations with adaptive traits","year":2019,"lang":"en","type":"dataset","venue":"Data Archiving and Networked Services (DANS)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of British Columbia; McGill University","funders":"","keywords":"Gene flow; Biological dispersal; Gene; Flooding (psychology); Event (particle physics); Selection (genetic algorithm); Guppy; Negative selection; Variation (astronomy)","score_opus":0.21113531600237168,"score_gpt":0.3221002091255978,"score_spread":0.1109648931232261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929678610","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05322617,0.0015951026,0.0018663245,0.00018948622,0.00029662822,0.001044505,0.9417549,0.00002550579,0.0000013761576],"genre_scores_gemma":[0.046984356,0.00029863894,0.0012716361,0.000035572488,0.00039162562,0.00012005791,0.95081204,0.000030670635,0.00005542296],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980232,0.00018393833,0.00043753086,0.00096149865,0.00003670366,0.00035710787],"domain_scores_gemma":[0.99617255,0.002342586,0.00033360184,0.0010521202,0.00004836475,0.000050807488],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029799112,0.00040190973,0.00077517546,0.00012857601,0.00036683306,0.00008842935,0.0009003005,0.00027375526,0.000008748231],"category_scores_gemma":[0.0000533694,0.000276026,0.000029965859,0.00010624127,0.00006178616,0.00045762627,0.0006231555,0.00034766458,0.0000027482702],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001755144,0.0003496285,0.1307188,0.00054024125,0.0012146458,0.00000233914,0.00060770684,0.00004348086,0.0010050202,0.0000030424371,0.8620896,0.0016703922],"study_design_scores_gemma":[0.004860183,0.0015437374,0.4748875,0.0026053812,0.001757064,0.000021575539,0.0002149566,0.005389402,0.000016400527,0.00008854212,0.50751656,0.0010987377],"about_ca_topic_score_codex":0.0063383617,"about_ca_topic_score_gemma":0.035060428,"teacher_disagreement_score":0.354573,"about_ca_system_score_codex":0.000066831984,"about_ca_system_score_gemma":0.000084380066,"threshold_uncertainty_score":0.9999692},"labels":[],"label_agreement":null},{"id":"W6930128254","doi":"10.5281/zenodo.12066914","title":"Iso 4572 pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Filtration (mathematics); Filter (signal processing); Test method; Cartridge; Fluid power; Calibration","score_opus":0.022673905664579504,"score_gpt":0.24331189775297157,"score_spread":0.22063799208839208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930128254","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012732389,0.001557306,0.00011954372,0.00026894567,0.0013655567,0.00028497985,0.0004764109,0.0016115708,0.99418837],"genre_scores_gemma":[0.0027076858,0.00032363,0.00001923966,0.00004664924,0.00038401398,4.5116376e-8,0.0039137998,0.006189653,0.98641527],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988759,0.00021120433,0.00018077316,0.00040947596,0.000028173414,0.00029447567],"domain_scores_gemma":[0.9993501,0.000007414419,0.00008739144,0.00040389778,0.00011477911,0.000036433656],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019368471,0.00019322816,0.00020606734,0.0003794888,0.0006192939,0.0003395243,0.0005160468,0.00030909,0.5695083],"category_scores_gemma":[0.00010400768,0.00018444745,0.00008042366,0.00027774062,0.00012254516,0.000047534242,0.0007054992,0.00041606586,0.6065704],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015692554,0.00005695105,1.734859e-7,0.00008161473,0.0001729919,0.0000030870742,0.00008300307,1.2684593e-7,0.013921564,0.0017945921,0.9686074,0.01526278],"study_design_scores_gemma":[0.00028047687,0.0001222585,0.0000128029915,0.000099949015,0.000043362426,0.00018088693,0.000044970697,5.5766714e-7,0.00035909467,0.00008355158,0.99857813,0.00019395084],"about_ca_topic_score_codex":0.00007960636,"about_ca_topic_score_gemma":0.0000015634,"teacher_disagreement_score":0.037062116,"about_ca_system_score_codex":0.000052639472,"about_ca_system_score_gemma":0.0000026749735,"threshold_uncertainty_score":0.7521549},"labels":[],"label_agreement":null},{"id":"W6930210549","doi":"10.5281/zenodo.12435227","title":"driving test handbook ontario pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Test (biology); Government (linguistics); Driving test; Christian ministry; Download; Ministry of Transport; Resource (disambiguation)","score_opus":0.019614869191283878,"score_gpt":0.22624941035776983,"score_spread":0.20663454116648594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930210549","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002603853,0.0011043265,0.00011473622,0.000121201345,0.0010841991,0.00031344942,0.00021336578,0.0012988664,0.9954895],"genre_scores_gemma":[0.002533729,0.00015187671,0.00002787501,0.0000297401,0.0002765024,5.8134237e-8,0.0025921513,0.004637267,0.9897508],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989026,0.00013250817,0.00019545526,0.0004262462,0.000030807136,0.00031238867],"domain_scores_gemma":[0.9993468,0.000016043117,0.00009731234,0.00038491632,0.00011274217,0.0000421932],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018128232,0.00020932837,0.00021910958,0.00034847294,0.00074646727,0.0004290303,0.00048493608,0.00029234134,0.5764356],"category_scores_gemma":[0.0001573843,0.00020317937,0.00007925277,0.00019321301,0.000115975534,0.000056420045,0.0007421083,0.00052420574,0.42387787],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008148802,0.0000759043,0.0000043945856,0.00005263214,0.00014150124,0.000004025447,0.00022065654,1.2184675e-7,0.021539621,0.00028261333,0.9712551,0.00641525],"study_design_scores_gemma":[0.0003051947,0.00015466008,0.00009236521,0.00024509645,0.000049868424,0.00019060688,0.000030141491,3.4020806e-7,0.00042993686,0.00004213398,0.9982457,0.000213948],"about_ca_topic_score_codex":0.0013690931,"about_ca_topic_score_gemma":0.00034619626,"teacher_disagreement_score":0.15255776,"about_ca_system_score_codex":0.00015358227,"about_ca_system_score_gemma":0.00000729651,"threshold_uncertainty_score":0.8285414},"labels":[],"label_agreement":null},{"id":"W6930657995","doi":"10.5281/zenodo.15160347","title":"TABLE 1 in A new species of the Thelepus cincinnatus complex from Saint-Pierre and Miquelon Archipelago (NW Atlantic) and genetic diversity of Amphitrite figulus (Dalyell, 1853) (Annelida, Terebelliformia)","year":2025,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Bay; Taxon; Archipelago; Section (typography); Genetic diversity; GenBank; Taxonomy (biology)","score_opus":0.026499272226241467,"score_gpt":0.2211900005762336,"score_spread":0.19469072834999213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930657995","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45564106,0.0013261985,0.000028027323,0.00022213855,0.00023323929,0.0005267356,0.541434,0.000044924156,0.00054368784],"genre_scores_gemma":[0.21508095,0.0037773575,0.00004969062,0.00007684006,0.000093708826,6.0813306e-8,0.7788069,0.00017819689,0.0019362703],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998704,0.00036437772,0.00032634687,0.0003246565,0.000049229333,0.00023135012],"domain_scores_gemma":[0.9990579,0.000072732284,0.00022225294,0.00044033412,0.00017062809,0.000036139052],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001657499,0.00017984294,0.00035771047,0.00024332818,0.00077780086,0.000084497384,0.00063685083,0.00020133515,0.004839964],"category_scores_gemma":[0.00023907941,0.00015222067,0.000051294075,0.00030243114,0.00028648606,0.000060355644,0.0029472155,0.0003863639,0.00006996655],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020737584,0.000116364194,0.0006510448,0.00020359285,0.00014901007,0.0000024565402,0.00035201243,0.0000043693954,0.025559708,0.000082848885,0.9669588,0.005712381],"study_design_scores_gemma":[0.0008830045,0.0001414463,0.06782646,0.00015958474,0.0000720111,0.000033082713,0.00011504041,0.0000053710214,0.0008254819,0.000101924285,0.9297021,0.00013446379],"about_ca_topic_score_codex":0.009288519,"about_ca_topic_score_gemma":0.00030629884,"teacher_disagreement_score":0.24056011,"about_ca_system_score_codex":0.00004293997,"about_ca_system_score_gemma":0.000016395963,"threshold_uncertainty_score":0.99730873},"labels":[],"label_agreement":null},{"id":"W6930812246","doi":"10.5281/zenodo.14104059","title":"PM_071826_B_Sint_Maria_Latem","year":2012,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pulpit; Period (music); Style (visual arts); Quarter (Canadian coin)","score_opus":0.026317827356740268,"score_gpt":0.23610220357012857,"score_spread":0.2097843762133883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930812246","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021409417,0.0010111604,0.00019968391,0.00016107033,0.0013399185,0.00034132248,0.00044828458,0.0017219507,0.9945625],"genre_scores_gemma":[0.016717007,0.00037399272,0.000056964123,0.000056433713,0.00080051954,6.438841e-8,0.010762311,0.0099343965,0.9612983],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987894,0.0003076281,0.00018667513,0.00030815275,0.000027215232,0.00038087627],"domain_scores_gemma":[0.9992232,0.000011709933,0.00014932676,0.00044038598,0.00012637264,0.00004900391],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025721773,0.00019760703,0.00022557385,0.00030717306,0.0009956309,0.00020172233,0.0005413376,0.00034902876,0.3982266],"category_scores_gemma":[0.000113140915,0.00019130655,0.00007126332,0.00021170833,0.0001173701,0.000073308096,0.0006836517,0.00034413018,0.11683926],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022545835,0.0000908599,0.000001074263,0.000034722678,0.00014229713,6.8058426e-7,0.00006870684,1.1695724e-7,0.012109699,0.002727558,0.93070436,0.05409738],"study_design_scores_gemma":[0.00044097868,0.000079021884,0.000072065304,0.000044479268,0.00004006911,0.00015255046,0.000024058812,2.8211346e-7,0.00036754043,0.000020533143,0.99855006,0.000208364],"about_ca_topic_score_codex":0.00009054476,"about_ca_topic_score_gemma":8.940641e-7,"teacher_disagreement_score":0.28138733,"about_ca_system_score_codex":0.000054436245,"about_ca_system_score_gemma":0.0000020625055,"threshold_uncertainty_score":0.88384837},"labels":[],"label_agreement":null},{"id":"W6931104742","doi":"10.5281/zenodo.4228732","title":"~Read !Book Business Plan, Business Reality: Starting and Managing Your Own Business in Canada (4th Edition) Full PDF","year":2020,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"New business development; Business analysis; Electronic business; Business relationship management; Business transformation; Line of business; Business rule; Business case; Business process modeling","score_opus":0.035105365399812016,"score_gpt":0.21910721433476196,"score_spread":0.18400184893494995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931104742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9329676,0.000796805,0.002633367,0.02798641,0.0013372462,0.0009548369,0.0007081308,0.0007425187,0.031873085],"genre_scores_gemma":[0.993526,0.00038584176,0.000031275737,0.0006856323,0.00033527662,2.1109352e-7,0.0034702038,0.00048603682,0.0010795179],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986161,0.00024095995,0.00032194142,0.00039275334,0.00005489949,0.0003733218],"domain_scores_gemma":[0.99889284,0.000028404253,0.0001285088,0.00020698404,0.00067238585,0.0000708539],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00024387846,0.0001701965,0.00022987978,0.00014863184,0.0011035613,0.00024468402,0.00032109144,0.00007875012,0.015452573],"category_scores_gemma":[0.00047533412,0.00017434751,0.000015680293,0.00097471755,0.00008615336,0.00035060424,0.0005661295,0.0002586179,0.0015972877],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011455386,0.00027349842,0.00077016366,0.00080420275,0.00024203198,0.00009851063,0.0020001999,0.0006231591,0.21406493,0.0013694813,0.67489535,0.10371294],"study_design_scores_gemma":[0.0009563597,0.000050527946,0.038007103,0.000072886505,0.000018777419,0.00013652885,0.0004942306,0.00006189328,0.0004166257,0.00003714283,0.9595199,0.00022797733],"about_ca_topic_score_codex":0.076140046,"about_ca_topic_score_gemma":0.004841619,"teacher_disagreement_score":0.2846246,"about_ca_system_score_codex":0.00016429804,"about_ca_system_score_gemma":0.000041401287,"threshold_uncertainty_score":0.9991801},"labels":[],"label_agreement":null},{"id":"W6931314518","doi":"10.5281/zenodo.3254699","title":"Opening the Magnetic Window: New Surveys of the Polarised Radio Sky","year":2019,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Sky; Radio wave; Radio telescope; Radio astronomy; Noise (video)","score_opus":0.019515936062097377,"score_gpt":0.22412612704749318,"score_spread":0.20461019098539582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931314518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9534106,0.004336044,0.0000011256428,0.0006177056,0.0019611083,0.000990673,0.031196466,0.000060317012,0.0074259187],"genre_scores_gemma":[0.9855819,0.0000019624629,0.00000230992,0.000048250193,0.000054228134,0.000011797908,0.0037248163,0.000009362384,0.010565398],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993636,0.0002540662,0.00012791141,0.00010652778,0.000010712087,0.00013720321],"domain_scores_gemma":[0.999394,0.00014480526,0.00008094994,0.0003296754,0.00004244047,0.000008129753],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000097825054,0.000080673104,0.00012363971,0.000018166764,0.000112026624,0.000018755789,0.00029788568,0.000107344684,0.31802154],"category_scores_gemma":[0.00018181192,0.000043057393,0.0000796158,0.0001209216,0.000008728411,0.00004935897,0.00013263659,0.00016971058,0.0032586078],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003277369,0.00004384617,0.017740311,0.00004403908,0.00013410306,2.7314562e-7,0.0003470527,0.000011123973,0.5080749,0.000058053985,0.46596476,0.007548769],"study_design_scores_gemma":[0.0007659077,0.0000848279,0.5704645,0.00020000094,0.000015383876,0.000036393092,0.000036407553,0.0000015890665,0.034965456,0.000014546537,0.39331868,0.00009633616],"about_ca_topic_score_codex":0.00028823887,"about_ca_topic_score_gemma":0.00004030997,"teacher_disagreement_score":0.5527242,"about_ca_system_score_codex":0.000007133883,"about_ca_system_score_gemma":0.000063862244,"threshold_uncertainty_score":0.99751747},"labels":[],"label_agreement":null},{"id":"W6931483998","doi":"10.5281/zenodo.4511162","title":"Mozi-Filmek.Hu HD Teljes Film 【Magyarul】 - Parallel (2021) filmek Videa nxl","year":2021,"lang":"hu","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Parallel port; Noise (video); Filter (signal processing); Feature (linguistics); Window (computing); Frame (networking)","score_opus":0.02863022371963671,"score_gpt":0.24436252655200977,"score_spread":0.21573230283237305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931483998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4772337,0.015598465,0.0045599495,0.012382384,0.009525397,0.0026639742,0.0051434226,0.0031635216,0.4697292],"genre_scores_gemma":[0.8458679,0.0077026277,0.0005976027,0.00071531633,0.0016715203,5.8648817e-7,0.022046475,0.0038929512,0.11750504],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99554896,0.0015026116,0.00075139845,0.0010559926,0.00012632957,0.0010146996],"domain_scores_gemma":[0.9968897,0.00011729734,0.00029189888,0.0010942444,0.0014001408,0.0002067249],"candidate_categories":["metaepi_narrow","sts","scholarly_communication","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00073622883,0.0004709208,0.0005737719,0.00033969045,0.00454663,0.0012239787,0.0010805264,0.000494463,0.34808442],"category_scores_gemma":[0.0013276718,0.0005067825,0.00025386238,0.0009877414,0.00040623324,0.00045309233,0.0022421603,0.0009454506,0.08366749],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003423029,0.000811035,0.000032025215,0.00012748736,0.00060635986,0.0000713593,0.0011892032,0.00006514582,0.22038835,0.006168738,0.70458984,0.06560812],"study_design_scores_gemma":[0.0017375583,0.00049841404,0.0020027703,0.0001143496,0.00012046223,0.00069348083,0.00095454266,0.00004966184,0.011551101,0.0001968344,0.98154324,0.00053755497],"about_ca_topic_score_codex":0.00016288087,"about_ca_topic_score_gemma":0.0000074496625,"teacher_disagreement_score":0.36863416,"about_ca_system_score_codex":0.00017973589,"about_ca_system_score_gemma":0.000038021248,"threshold_uncertainty_score":0.99981284},"labels":[],"label_agreement":null},{"id":"W6931508295","doi":"10.5281/zenodo.5103045","title":"Devia prospera","year":2003,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Synonym (taxonomy); Halting problem; Type (biology); Transitive relation","score_opus":0.026907964178532896,"score_gpt":0.23642299761295812,"score_spread":0.20951503343442524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931508295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6331637,0.0005249736,0.0015332658,0.00051115005,0.0009912638,0.0006075902,0.00013047011,0.0013792538,0.36115834],"genre_scores_gemma":[0.99470985,0.000045377292,0.00007044171,0.000056287223,0.000042722746,3.1826225e-8,0.00061249826,0.0004543158,0.0040085013],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99910533,0.00027556383,0.00014274853,0.00021566328,0.000018562494,0.0002421454],"domain_scores_gemma":[0.99945253,0.000010486405,0.00004351251,0.00023870144,0.00022430297,0.000030460946],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029512643,0.000088015295,0.00009712578,0.00009487765,0.0016837616,0.00019058565,0.00025843596,0.00007848046,0.05445637],"category_scores_gemma":[0.00030835174,0.00008357851,0.00003585427,0.00023251335,0.00007728094,0.00011780746,0.00017572557,0.00016864315,0.024513073],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006105669,0.00026633625,0.00005177937,0.0000260343,0.00010352691,0.0000020546418,0.0005020563,0.000004530348,0.63168955,0.05067471,0.26110154,0.055516805],"study_design_scores_gemma":[0.00045863842,0.0001300647,0.0008440997,0.000006691117,0.000008210818,0.0002342996,0.00007203259,9.653332e-7,0.01566941,0.0001338233,0.9823423,0.00009946661],"about_ca_topic_score_codex":0.000009644925,"about_ca_topic_score_gemma":1.9795371e-7,"teacher_disagreement_score":0.72124076,"about_ca_system_score_codex":0.00003926851,"about_ca_system_score_gemma":0.0000020809216,"threshold_uncertainty_score":0.9996159},"labels":[],"label_agreement":null},{"id":"W6931552080","doi":"10.5281/zenodo.7900428","title":"FIGURE 4 in Typification and taxonomy of Echinophora scabra (Echinophoreae, Apioideae)","year":2023,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Typification; Taxonomy (biology); IUCN Red List; Nomenclature","score_opus":0.03053099125938886,"score_gpt":0.23365999320387307,"score_spread":0.20312900194448422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931552080","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038354944,0.0024608895,0.00021219288,0.0003568961,0.0011481041,0.0019457162,0.0018510425,0.0026774479,0.95099276],"genre_scores_gemma":[0.3844444,0.005853323,0.00025475738,0.000061056,0.00044403903,0.0000012184983,0.013734372,0.018876212,0.57633066],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990025,0.00021876795,0.00024177646,0.0003176337,0.000025015279,0.00019427465],"domain_scores_gemma":[0.9993637,0.000023227964,0.0001721759,0.00031503543,0.00010101969,0.000024844243],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00027358066,0.00014912998,0.0002335803,0.000510733,0.00029798446,0.00007806383,0.00031563907,0.00026665046,0.024792612],"category_scores_gemma":[0.00018513117,0.00015060892,0.000034526896,0.0003772783,0.00012415064,0.000056483186,0.00035426463,0.000276228,0.0053781294],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059540835,0.00011323489,0.000058087928,0.00012067206,0.000097904005,0.0000014496094,0.00017803357,0.0000012374934,0.03355033,0.0018883996,0.905045,0.05888612],"study_design_scores_gemma":[0.00044775597,0.00009730137,0.0023270838,0.000106408355,0.000015243048,0.00002205949,0.0000719529,0.0000022328659,0.0007776033,0.000035941983,0.995961,0.00013539952],"about_ca_topic_score_codex":0.00045743457,"about_ca_topic_score_gemma":0.000015926484,"teacher_disagreement_score":0.37466213,"about_ca_system_score_codex":0.000039843846,"about_ca_system_score_gemma":0.000003833882,"threshold_uncertainty_score":0.9953963},"labels":[],"label_agreement":null},{"id":"W6931665728","doi":"10.5281/zenodo.7127659","title":"Citation Scores for Greco-Roman Historians in North America, Fall 2022","year":2022,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Citation; Scholarship; Representation (politics); Measure (data warehouse); Citation analysis","score_opus":0.026050614267407606,"score_gpt":0.2322057096237394,"score_spread":0.2061550953563318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931665728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986917,0.00027984192,0.0009395081,0.0006838237,0.0012680164,0.0007921397,0.0010196364,0.00044467184,0.0076553235],"genre_scores_gemma":[0.98740923,0.000050533672,0.00006053095,0.00010295477,0.000100099955,0.0000011470875,0.009022929,0.00047778466,0.0027747657],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99884814,0.00036140438,0.00021274836,0.00028177182,0.000035975536,0.00025996048],"domain_scores_gemma":[0.99946696,0.000033988224,0.0000971326,0.00021130456,0.00016553541,0.000025068415],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00029730724,0.0000964302,0.00013160713,0.00030009844,0.0021654752,0.00008998932,0.00039632872,0.00004042994,0.017116683],"category_scores_gemma":[0.00021720493,0.00010950796,0.00004868961,0.00053499354,0.00006377053,0.00012148171,0.00042913086,0.00023822248,0.0013369936],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068033015,0.0006811803,0.00051897677,0.000059765058,0.00012750122,0.0000047799313,0.004577558,0.00033883215,0.14895006,0.0032925317,0.6831341,0.15763439],"study_design_scores_gemma":[0.00081700995,0.00051182765,0.0050145043,0.0000030168867,0.000009600784,0.00004216382,0.0004474023,0.000027468714,0.00017035878,0.000065592954,0.9927682,0.00012284778],"about_ca_topic_score_codex":0.00019462768,"about_ca_topic_score_gemma":0.000034385597,"teacher_disagreement_score":0.30963412,"about_ca_system_score_codex":0.00021819262,"about_ca_system_score_gemma":0.0000048325796,"threshold_uncertainty_score":0.9994406},"labels":[],"label_agreement":null},{"id":"W6931844269","doi":"10.5683/sp3/yzy9tn","title":"Data from: Offspring of older parents are smaller—but no less bilaterally symmetrical—than offspring of younger parents in the aquatic plant Lemna turionifera","year":2020,"lang":"en","type":"dataset","venue":"Borealis","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Offspring; Maternal effect; Paternal care; Reproduction; Lemna","score_opus":0.05768950997968579,"score_gpt":0.2711120328562731,"score_spread":0.2134225228765873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931844269","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12598412,0.00051017123,0.0000042495785,0.000091039,0.0008059172,0.0003928424,0.87217146,0.00001822109,0.000021970436],"genre_scores_gemma":[0.16464092,0.0007238754,0.000013615915,0.000074230906,0.00014470781,0.00003073391,0.8343351,0.00002309381,0.000013721509],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974118,0.00042693497,0.0010441092,0.0006417476,0.00009523505,0.00038017312],"domain_scores_gemma":[0.9971677,0.0003762612,0.0008063678,0.0015259378,0.000087688575,0.000036064925],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032549957,0.0004280483,0.0010129168,0.000320208,0.00009889406,0.000046691097,0.0016513288,0.0005511722,0.00014871809],"category_scores_gemma":[0.00033839882,0.00030799187,0.00014758244,0.00032098166,0.0000971625,0.00015886631,0.00071867,0.0006449,0.00007750613],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025426754,0.0005101217,0.016235953,0.00029495134,0.0006451698,0.000019206538,0.0001595246,0.0000019183162,0.0047321157,0.0000068656377,0.97689104,0.00024884118],"study_design_scores_gemma":[0.001992478,0.00016716727,0.25033683,0.0011453949,0.00049207226,0.00002578592,0.00035008186,0.000017508251,0.0014912054,0.00001581676,0.7434184,0.00054725265],"about_ca_topic_score_codex":0.1647238,"about_ca_topic_score_gemma":0.026427437,"teacher_disagreement_score":0.23410088,"about_ca_system_score_codex":0.000037092846,"about_ca_system_score_gemma":0.000094577896,"threshold_uncertainty_score":0.99993724},"labels":[],"label_agreement":null},{"id":"W6931919705","doi":"10.5683/sp3/vuqem6","title":"Perth Ontario. 1:50,000. Map Sheet 031C16, ed. 4, 1994","year":2021,"lang":"en","type":"dataset","venue":"Borealis","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Georeference; General partnership; Raster graphics; Natural (archaeology); Aerial photography; Digital mapping; Geographic information system; Government (linguistics)","score_opus":0.013023526859047042,"score_gpt":0.23882158513413235,"score_spread":0.2257980582750853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931919705","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00049942767,0.0025652845,0.0000018150631,0.00014850522,0.004260124,0.00020652216,0.99150395,0.000075179,0.0007392098],"genre_scores_gemma":[0.000031992462,0.0009867568,0.000017999502,0.0003141023,0.0005348064,0.00006982999,0.99209034,0.00003063578,0.0059235385],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982774,0.00018216265,0.00044127426,0.0005761388,0.000027744141,0.00049522915],"domain_scores_gemma":[0.9985391,0.0000724493,0.00019950091,0.0010554523,0.00008687765,0.000046603403],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013610252,0.00045782863,0.00068234,0.00015984854,0.00028136428,0.00008908198,0.00040502916,0.0011149162,0.027320001],"category_scores_gemma":[0.000042148677,0.0004033544,0.00026760716,0.0000870802,0.000094999974,0.00008348007,0.0002527808,0.00080730324,0.0005878238],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005802475,0.00018781735,0.00007689611,0.00005434014,0.00038887473,0.0000175273,0.000042892694,3.3309152e-7,0.0015639104,0.000023691555,0.99715436,0.00043131763],"study_design_scores_gemma":[0.0005754643,0.000116850984,0.0018457718,0.00008923463,0.00024332528,0.00016689861,0.000031484,2.48973e-8,0.0002784848,0.00001581964,0.9961715,0.0004651494],"about_ca_topic_score_codex":0.7956204,"about_ca_topic_score_gemma":0.763142,"teacher_disagreement_score":0.032478373,"about_ca_system_score_codex":0.00014560434,"about_ca_system_score_gemma":0.0003085495,"threshold_uncertainty_score":0.9998418},"labels":[],"label_agreement":null},{"id":"W6932128070","doi":"10.5281/zenodo.8369272","title":"handley-lab/anesthetic: v2.3.3","year":2023,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Process (computing); Identification (biology); Product (mathematics)","score_opus":0.02872568982386964,"score_gpt":0.2438703792141137,"score_spread":0.21514468939024406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6932128070","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010895908,0.000771469,0.00018064637,0.0004417749,0.0017878794,0.0006168668,0.00085706206,0.0076212953,0.9866334],"genre_scores_gemma":[0.0077641006,0.00079433306,0.000026364025,0.00005792952,0.0004307293,1.2946857e-7,0.0053329947,0.018326733,0.9672667],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99868804,0.00028816992,0.00020541367,0.00041334625,0.000037339687,0.0003676894],"domain_scores_gemma":[0.999168,0.000019826593,0.00013540288,0.0004762675,0.00015534404,0.00004515165],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00026787128,0.00021451963,0.00024833347,0.00039848522,0.0011347741,0.00025571982,0.0006068143,0.0003442743,0.14955938],"category_scores_gemma":[0.00020068092,0.00020823322,0.00007786678,0.0003530247,0.00015339177,0.000057314217,0.0006129283,0.0003518094,0.14684474],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023837692,0.0000745918,0.0000016221578,0.000034689114,0.00012506705,0.0000043022396,0.000094291,4.6356334e-7,0.0069054454,0.0012898373,0.9612638,0.03018206],"study_design_scores_gemma":[0.0005353852,0.0001571681,0.000099502,0.00008316713,0.000032495875,0.00022780192,0.00004665632,6.3713566e-7,0.00043095913,0.000025815856,0.9981379,0.00022251344],"about_ca_topic_score_codex":0.00017496367,"about_ca_topic_score_gemma":0.000007219655,"teacher_disagreement_score":0.036874104,"about_ca_system_score_codex":0.000057472796,"about_ca_system_score_gemma":0.0000032259936,"threshold_uncertainty_score":0.8727879},"labels":[],"label_agreement":null},{"id":"W6939421333","doi":"10.60692/mpkda-b5424","title":"The half-life of maternal transplacental antibodies against diphtheria, tetanus, and pertussis in infants: an individual participant data meta-analysis","year":2022,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Transplacental; Antibody; Tetanus; Diphtheria; Vaccination; Pertussis vaccine; Toxoid; Gestational age","score_opus":0.12704100131863358,"score_gpt":0.2728612887250169,"score_spread":0.14582028740638334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939421333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99642044,0.00028527883,0.00005257766,0.00006994209,0.0002871052,0.0002159336,0.0025829924,0.000031250303,0.00005446886],"genre_scores_gemma":[0.99932563,0.0000038525977,0.000010747945,0.000038159065,0.000009574951,0.000067528556,0.00050560123,0.000005215205,0.000033711847],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842846,0.00041448654,0.00073591346,0.0001586862,0.00005648166,0.00020598495],"domain_scores_gemma":[0.99910736,0.000024666975,0.00032106522,0.0004819862,0.000040573963,0.000024318904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009164272,0.0001456512,0.0005111511,0.000246077,0.0004183691,0.00009936672,0.00033247046,0.000062633044,0.00019410411],"category_scores_gemma":[0.000014166883,0.00008999563,0.00012959918,0.0002586992,0.00006797624,0.00057283684,0.00021787797,0.00011990745,0.000013397975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006587985,0.00003639185,0.83260626,0.00014493546,0.07233234,0.0000017975581,0.09221397,0.000469378,0.0006318256,0.00021970602,0.00007379866,0.000610792],"study_design_scores_gemma":[0.0021991595,0.00016087241,0.88737434,0.00001339022,0.041027036,0.000086972796,0.064011306,0.001015608,0.0012163763,7.710497e-7,0.0025377534,0.00035641325],"about_ca_topic_score_codex":0.00030150593,"about_ca_topic_score_gemma":0.000043918903,"teacher_disagreement_score":0.054768067,"about_ca_system_score_codex":0.000012975755,"about_ca_system_score_gemma":0.00002781306,"threshold_uncertainty_score":0.36699152},"labels":[],"label_agreement":null},{"id":"W6939950463","doi":"10.6084/m9.figshare.27750154","title":"Additional file 2 of Probiotic bacteria-released extracellular vesicles enhance macrophage phagocytosis in polymicrobial sepsis by activating the FPR1/2 pathway","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"","keywords":"Probiotic; Macrophage; Phagocytosis; Extracellular vesicles; Extracellular; Sepsis; Inflammation","score_opus":0.011431447948794369,"score_gpt":0.22179861788540328,"score_spread":0.21036716993660892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939950463","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03581995,0.0013250527,4.7670406e-7,0.000063701045,0.00017123067,0.00022204564,0.9621449,0.00006915906,0.00018345461],"genre_scores_gemma":[0.29449892,0.0000036558959,0.000026613103,0.000027620188,0.0000897021,0.00045398177,0.70225316,0.000023916884,0.0026224016],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99900883,0.00012721692,0.00030049877,0.00028220922,0.000019713912,0.00026153625],"domain_scores_gemma":[0.9985736,0.0010637078,0.00011704887,0.0001824621,0.000048104008,0.000015081237],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000036797817,0.00017836905,0.00019917646,0.00008087661,0.00013753901,0.000055523113,0.00018001405,0.0001981293,0.98391944],"category_scores_gemma":[0.00050451723,0.00013719803,0.00011388362,0.00028533136,0.000026977925,0.00015793258,0.00007749699,0.00028331048,0.002418115],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012372863,0.000043040975,4.015193e-7,0.00005918947,0.000030435425,0.0000014908487,0.00004021104,2.756793e-7,0.4830598,0.0000014876327,0.51308465,0.0036666447],"study_design_scores_gemma":[0.00010531393,0.000031915344,0.00029277793,0.0012369773,0.00000411209,0.000013585665,0.000022590692,0.0000057636635,0.4444787,0.000002752893,0.5537083,0.00009717043],"about_ca_topic_score_codex":0.000044024262,"about_ca_topic_score_gemma":0.000018861747,"teacher_disagreement_score":0.9815013,"about_ca_system_score_codex":0.00004251621,"about_ca_system_score_gemma":0.00011301371,"threshold_uncertainty_score":0.9983586},"labels":[],"label_agreement":null},{"id":"W6940041956","doi":"10.6084/m9.figshare.28043019.v1","title":"Pertactin deficiency of <i>Bordetella pertussis</i>: Insights into epidemiology, and perspectives on surveillance and public health impact","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pertactin; Pertussis vaccine; Whooping cough; Bordetella pertussis; Public health; Vaccination; MEDLINE","score_opus":0.06381759842169192,"score_gpt":0.32588655185597387,"score_spread":0.26206895343428194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6940041956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8460005,0.13966356,0.0000018533219,0.0017727189,0.00022432624,0.00019508053,0.011579698,0.00009521394,0.00046702163],"genre_scores_gemma":[0.9946822,0.0012158091,0.000009113746,0.00007371544,0.000039287417,0.000021705124,0.003879406,0.000012179364,0.00006656807],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988643,0.00029589864,0.00023048818,0.00034015364,0.000009884581,0.00025926164],"domain_scores_gemma":[0.9988469,0.0007983362,0.00008516142,0.0001537874,0.000069237765,0.00004657957],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017099823,0.00015512014,0.0003311086,0.00015496253,0.00018011221,0.000027590142,0.000067893474,0.00015092675,0.009668532],"category_scores_gemma":[0.0013418667,0.000107196734,0.00006642835,0.00017091681,0.00004971458,0.00010274648,0.00006518139,0.00020672673,0.00011944068],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004023279,0.0011442513,0.05136515,0.003217705,0.0011691061,0.000010213076,0.048862226,0.000011756738,0.12106471,0.0099970065,0.50102425,0.26173133],"study_design_scores_gemma":[0.0008245464,0.0023659992,0.48568702,0.0013164212,0.000014047461,0.0002526597,0.0033919187,0.000085216474,0.0013550406,0.00035316462,0.5037852,0.00056874397],"about_ca_topic_score_codex":0.00032193106,"about_ca_topic_score_gemma":0.00012189944,"teacher_disagreement_score":0.43432188,"about_ca_system_score_codex":0.00003941223,"about_ca_system_score_gemma":0.00011373399,"threshold_uncertainty_score":0.99123675},"labels":[],"label_agreement":null},{"id":"W6948916202","doi":"10.5281/zenodo.10149921","title":"Vendor-neutrality and upgrade immunity: Post-upgrade assessment of vendor-neutral qMRI from two perspectives","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"","keywords":"Upgrade; Key (lock); Field (mathematics); Process (computing); Scope (computer science)","score_opus":0.03284992474109569,"score_gpt":0.29215459578632785,"score_spread":0.25930467104523214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6948916202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99346954,0.0002957706,0.000037511032,0.00076136936,0.00031266804,0.00023755664,0.0007237289,0.00045230266,0.0037095665],"genre_scores_gemma":[0.9964371,0.0003502905,0.00003831442,0.000014393974,0.00008251402,9.9365245e-8,0.0025168913,0.00028519594,0.00027525454],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985223,0.0005593071,0.00024924267,0.00032742354,0.00003948255,0.00030225381],"domain_scores_gemma":[0.99912,0.0000856502,0.00011700575,0.00034938628,0.0002809105,0.000047051937],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00038534086,0.0001433844,0.0002214089,0.00021895945,0.001214417,0.00014846274,0.00037611122,0.000088724104,0.004032094],"category_scores_gemma":[0.00021216924,0.00014288342,0.00007054101,0.00040762196,0.00024362018,0.00016974377,0.0006463891,0.00033275943,0.0009272636],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028691744,0.0002361808,0.00027019356,0.000041867082,0.00037372808,0.0000044784874,0.0034961253,0.000021229824,0.9571689,0.011269252,0.010460599,0.016370524],"study_design_scores_gemma":[0.004949476,0.0012356095,0.29897946,0.00006397347,0.00011875997,0.000130341,0.007081364,0.000053397704,0.038139526,0.0006731289,0.6481119,0.00046307986],"about_ca_topic_score_codex":0.0005844598,"about_ca_topic_score_gemma":0.000005609273,"teacher_disagreement_score":0.91902936,"about_ca_system_score_codex":0.00006231272,"about_ca_system_score_gemma":0.0000068617555,"threshold_uncertainty_score":0.99985063},"labels":[],"label_agreement":null},{"id":"W6958103069","doi":"10.60692/731p4-eh711","title":"Three Epidemics of Invasive Multidrug-ResistantSalmonellaBloodstream Infection in Blantyre, Malawi, 1998–2014","year":2015,"lang":"en","type":"article","venue":"UCL Discovery (University College London)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Blood culture; Epidemiology; Cerebrospinal fluid; Meningitis; Outbreak; Pandemic","score_opus":0.018893572926892952,"score_gpt":0.21711885277789064,"score_spread":0.1982252798509977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958103069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99610704,0.00025863588,0.00033505965,0.00011393561,0.0008371339,0.00032133737,0.00074352405,0.00005178243,0.0012315644],"genre_scores_gemma":[0.9958755,0.0003356131,0.000094194846,0.00001974399,0.00003342997,0.0000017791167,0.00015516998,0.000014975486,0.003469625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988607,0.00018432156,0.00027458288,0.00033384445,0.000034324607,0.00031220258],"domain_scores_gemma":[0.9991112,0.00019828923,0.00022145525,0.0003182521,0.000103514634,0.0000473096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002348814,0.00021184882,0.00044225634,0.00039014706,0.00014124696,0.000010492004,0.0001996382,0.00029771478,0.00010445926],"category_scores_gemma":[0.00010402663,0.00022596185,0.00013621953,0.0005313171,0.00017256262,0.0007091244,0.00018991236,0.0002382687,0.00020105414],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025963623,0.0010394171,0.8581666,0.000095925745,0.00039219318,0.00006658935,0.0005287452,0.00029596456,0.098736115,0.010628437,0.027076332,0.0003773567],"study_design_scores_gemma":[0.023264905,0.0013143902,0.8610702,0.0003791322,0.000469109,0.0002157491,0.004712971,0.00030728066,0.04751946,0.00223072,0.05706655,0.0014495325],"about_ca_topic_score_codex":0.013270482,"about_ca_topic_score_gemma":0.039185412,"teacher_disagreement_score":0.051216654,"about_ca_system_score_codex":0.00017802141,"about_ca_system_score_gemma":0.00021006119,"threshold_uncertainty_score":0.99330026},"labels":[],"label_agreement":null},{"id":"W6958455448","doi":"10.6084/m9.figshare.27750154.v1","title":"Additional file 2 of Probiotic bacteria-released extracellular vesicles enhance macrophage phagocytosis in polymicrobial sepsis by activating the FPR1/2 pathway","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"","keywords":"Probiotic; Macrophage; Phagocytosis; Extracellular vesicles; Extracellular; Sepsis; Inflammation","score_opus":0.011431447948794369,"score_gpt":0.22179861788540328,"score_spread":0.21036716993660892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958455448","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03581995,0.0013250527,4.7670406e-7,0.000063701045,0.00017123067,0.00022204564,0.9621449,0.00006915906,0.00018345461],"genre_scores_gemma":[0.29449892,0.0000036558959,0.000026613103,0.000027620188,0.0000897021,0.00045398177,0.70225316,0.000023916884,0.0026224016],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99900883,0.00012721692,0.00030049877,0.00028220922,0.000019713912,0.00026153625],"domain_scores_gemma":[0.9985736,0.0010637078,0.00011704887,0.0001824621,0.000048104008,0.000015081237],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000036797817,0.00017836905,0.00019917646,0.00008087661,0.00013753901,0.000055523113,0.00018001405,0.0001981293,0.98391944],"category_scores_gemma":[0.00050451723,0.00013719803,0.00011388362,0.00028533136,0.000026977925,0.00015793258,0.00007749699,0.00028331048,0.002418115],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012372863,0.000043040975,4.015193e-7,0.00005918947,0.000030435425,0.0000014908487,0.00004021104,2.756793e-7,0.4830598,0.0000014876327,0.51308465,0.0036666447],"study_design_scores_gemma":[0.00010531393,0.000031915344,0.00029277793,0.0012369773,0.00000411209,0.000013585665,0.000022590692,0.0000057636635,0.4444787,0.000002752893,0.5537083,0.00009717043],"about_ca_topic_score_codex":0.000044024262,"about_ca_topic_score_gemma":0.000018861747,"teacher_disagreement_score":0.9815013,"about_ca_system_score_codex":0.00004251621,"about_ca_system_score_gemma":0.00011301371,"threshold_uncertainty_score":0.9983586},"labels":[],"label_agreement":null},{"id":"W6958576571","doi":"10.6084/m9.figshare.29115407","title":"Additional file 1 of Understanding the value of meningococcal vaccination for adolescents and young adults in the United States: insights from a steady-state modelling approach","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Young adult; Value (mathematics); Sensitivity (control systems); Vaccination; Meningococcal disease","score_opus":0.038704080903214644,"score_gpt":0.24318305599730897,"score_spread":0.20447897509409432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958576571","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025888426,0.000087973465,0.00060144067,0.000014827671,0.000038035425,0.00040077307,0.9728169,0.000008380427,0.00014325249],"genre_scores_gemma":[0.503754,0.0000031125467,0.00003336956,0.000015290347,0.0000065644017,0.00024224892,0.49591202,0.0000029891626,0.000030408957],"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9995053,0.00009937257,0.0001825996,0.0001145952,0.000014070986,0.000084101215],"domain_scores_gemma":[0.99885267,0.0008617697,0.0001116433,0.00008793473,0.000082190374,0.0000037728803],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000030261644,0.00007383708,0.00011159674,0.00010526049,0.00011452475,0.00001196976,0.00009577387,0.000074750125,0.070906885],"category_scores_gemma":[0.00017659205,0.000047120564,0.00003252567,0.00019589503,0.000009710362,0.00005394514,0.000034514567,0.00010309132,0.0000037899956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003916485,0.00021257674,0.0000491245,0.00033067458,0.00012673334,1.3402371e-7,0.0047028926,0.0034302354,0.0004516231,0.0005266357,0.9894537,0.0003240258],"study_design_scores_gemma":[0.014000039,0.0007079431,0.06746951,0.031188022,0.00021826713,0.00002027144,0.040115032,0.42032835,0.0034658446,0.020055888,0.4014356,0.0009952415],"about_ca_topic_score_codex":0.00014076252,"about_ca_topic_score_gemma":0.00006326697,"teacher_disagreement_score":0.5880181,"about_ca_system_score_codex":0.000021941269,"about_ca_system_score_gemma":0.000026153704,"threshold_uncertainty_score":0.9299424},"labels":[],"label_agreement":null},{"id":"W6958855509","doi":"10.6084/m9.figshare.c.3825379_d1.v1","title":"Additional file 1: Table S1. of How well do ICD-9 physician claim diagnostic codes identify confirmed pertussis cases in Alberta, Canada? A Canadian Immunization Research Network (CIRN) Study","year":2017,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Immunization; Diagnosis code; Pertussis vaccine; MEDLINE","score_opus":0.03907385791760786,"score_gpt":0.2917761595308481,"score_spread":0.25270230161324025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958855509","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035853025,0.00014372052,1.777898e-8,0.00024161352,0.00023984503,0.00051187474,0.9607999,0.000008935037,0.0022011213],"genre_scores_gemma":[0.61536896,0.0000040131845,0.0000010730113,0.000026329133,0.000087848755,0.00043825823,0.38207886,0.000011901844,0.001982732],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99869055,0.0002722133,0.00020576063,0.00026001653,0.00004711782,0.00052434386],"domain_scores_gemma":[0.9955354,0.0033846793,0.00017459254,0.00046702346,0.000384072,0.00005424036],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000085435495,0.00014911672,0.0002720366,0.00013706519,0.0011344816,0.00013857512,0.00036341764,0.00016059312,0.87365675],"category_scores_gemma":[0.0069870595,0.00014719492,0.000039325518,0.00021903992,0.000040901938,0.00019890963,0.00013975344,0.0002957882,0.00084919855],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016781512,0.000098720084,0.0025760548,0.000021627338,0.00006920454,0.00001749945,0.00006377266,0.0000140169695,0.00008460755,0.000009464991,0.99668723,0.0003410391],"study_design_scores_gemma":[0.00036542595,0.00009779848,0.33825532,0.0007731826,0.000010073159,0.000010742012,0.0004069326,0.000007037608,0.00014729882,0.000009491069,0.65977544,0.00014123821],"about_ca_topic_score_codex":0.9658012,"about_ca_topic_score_gemma":0.99839044,"teacher_disagreement_score":0.87280756,"about_ca_system_score_codex":0.00016471664,"about_ca_system_score_gemma":0.0013106494,"threshold_uncertainty_score":0.9999288},"labels":[],"label_agreement":null},{"id":"W6960965236","doi":"10.14288/1.0228098","title":"Diversity of Canadian meningococcal serogroup B isolates and estimated coverage of an investigational meningococcal serogroup B vaccine (4CMenB)","year":2016,"lang":"en","type":"article","venue":"Open Collections","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Multilocus sequence typing; Neisseria meningitidis; Serotype; Typing; Meningococcal vaccine; Antigen; Population","score_opus":0.026453581297123437,"score_gpt":0.24983626763341787,"score_spread":0.22338268633629443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6960965236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99493873,0.000046221325,0.00009338997,0.00028597473,0.00027771818,0.0003966497,0.00035450264,0.000028896633,0.0035778938],"genre_scores_gemma":[0.99421763,0.000051709423,0.00034962778,0.000023661692,0.000020033533,0.00003214542,0.00008127035,0.000011217472,0.0052126963],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990701,0.00014845737,0.00029089508,0.00024861714,0.000014876746,0.00022702981],"domain_scores_gemma":[0.99926716,0.00013676172,0.00014236511,0.00018313275,0.0001762003,0.00009436799],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022536225,0.00014318743,0.0002924714,0.0002819885,0.0022863906,0.00006305837,0.00020983796,0.00017709771,0.001869306],"category_scores_gemma":[0.0000788351,0.00011560314,0.000042091728,0.0007472867,0.00012226742,0.00040091548,0.0003921905,0.000098558514,0.0000063432835],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054210814,0.00042575176,0.10029656,0.000023213055,0.00063921686,0.0000012225881,0.0009864423,0.000026751395,0.87326336,0.0013099294,0.019896837,0.0025886006],"study_design_scores_gemma":[0.022063049,0.0048793918,0.5551713,0.0004851474,0.0006899101,0.00063374103,0.0009346483,0.0003547505,0.29965356,0.0056917276,0.10789663,0.0015461644],"about_ca_topic_score_codex":0.33274597,"about_ca_topic_score_gemma":0.19615607,"teacher_disagreement_score":0.5736098,"about_ca_system_score_codex":0.000062505474,"about_ca_system_score_gemma":0.00017721622,"threshold_uncertainty_score":0.9990431},"labels":[],"label_agreement":null},{"id":"W6968239106","doi":"10.5281/zenodo.12953637","title":"2018 diabetes canada guidelines","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Diabetes mellitus; MEDLINE; Population; Disease; Type 1 diabetes","score_opus":0.033446998255448716,"score_gpt":0.25036172167184584,"score_spread":0.21691472341639711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6968239106","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005230629,0.0049533467,0.00003587677,0.0012093239,0.0034381142,0.00035158588,0.0019651896,0.001683488,0.98584],"genre_scores_gemma":[0.0032224513,0.00037086592,0.00003108558,0.00017235977,0.0006520093,6.633516e-8,0.0057297093,0.007457434,0.982364],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989007,0.0001557429,0.00022738354,0.00036831386,0.00003582514,0.00031204915],"domain_scores_gemma":[0.9992632,0.000009063525,0.00009538538,0.00037334586,0.00022035356,0.00003861617],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018218975,0.00019312551,0.00021087418,0.00023443076,0.000560658,0.0002344421,0.00050410663,0.00020645249,0.1459931],"category_scores_gemma":[0.00022811977,0.00017812595,0.00005337586,0.00022660254,0.000084349136,0.000035101137,0.000613375,0.00028837856,0.048722144],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005006236,0.000020442938,6.736325e-7,0.000076254684,0.00017577206,0.0000019142083,0.000020153584,3.0264766e-7,0.0076111997,0.00038314244,0.978773,0.012932139],"study_design_scores_gemma":[0.00017725657,0.000060683207,0.000014369832,0.00012245083,0.000037839818,0.000041060135,0.00003168884,0.0000012289639,0.00041787518,0.000028870032,0.9988747,0.00019192885],"about_ca_topic_score_codex":0.03248357,"about_ca_topic_score_gemma":0.0023300643,"teacher_disagreement_score":0.09727095,"about_ca_system_score_codex":0.00010461194,"about_ca_system_score_gemma":0.000012292733,"threshold_uncertainty_score":0.9739592},"labels":[],"label_agreement":null},{"id":"W6969534820","doi":"10.5683/sp3/7wtfso","title":"Small Area Data?and Retrieving Data","year":2018,"lang":"en","type":"dataset","venue":"Borealis","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Data collection; Feature (linguistics); Data source; Key (lock)","score_opus":0.08780147764389785,"score_gpt":0.29350522469637275,"score_spread":0.2057037470524749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6969534820","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021929658,0.0016115563,0.000008592527,0.00011533084,0.0012988336,0.00015067212,0.9964268,0.000049326187,0.000119561235],"genre_scores_gemma":[0.000015705471,0.0024241107,0.00003744483,0.00009297301,0.00051940756,0.000005179029,0.9966767,0.000017189572,0.00021133435],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998582,0.000110630615,0.0002969572,0.0007253887,0.00001269803,0.00027229165],"domain_scores_gemma":[0.99560905,0.00012453082,0.0001878015,0.003988232,0.00006339152,0.000026987705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039248995,0.0002606517,0.00038464958,0.00010635919,0.00022011825,0.0000771452,0.0015400503,0.00063131703,0.0008272047],"category_scores_gemma":[0.0004431309,0.00021763761,0.000024219167,0.00008222419,0.000155448,0.0001600811,0.0025892826,0.0003524992,0.00009252802],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035360572,0.000037746806,0.000035183846,0.00003968768,0.00018950648,0.0000022783163,0.0000048689317,3.0383613e-9,0.00042690863,0.0000047071453,0.99818456,0.0010391978],"study_design_scores_gemma":[0.00031183625,0.00006766384,0.0003693806,0.00007690647,0.00024288993,0.000115274954,0.000007373763,0.0000011002743,0.000062867315,0.000013019572,0.9984862,0.00024547105],"about_ca_topic_score_codex":0.04417292,"about_ca_topic_score_gemma":0.04251844,"teacher_disagreement_score":0.0032628435,"about_ca_system_score_codex":0.000012306604,"about_ca_system_score_gemma":0.00007735513,"threshold_uncertainty_score":0.9749531},"labels":[],"label_agreement":null},{"id":"W6976757328","doi":"10.6084/m9.figshare.13269842.v1","title":"Additional file 1 of Revisiting the epidemiology of pertussis in Canada, 1924–2015: a literature review, evidence synthesis, and modeling study","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"York University","funders":"","keywords":"Incidence (geometry); Table (database); Epidemiology; Bootstrapping (finance); Age groups; Distribution (mathematics)","score_opus":0.06312534173390245,"score_gpt":0.2868000838134756,"score_spread":0.22367474207957316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976757328","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018326959,0.044801448,1.02706096e-7,0.0010980131,0.000015061702,0.0002066552,0.9520168,0.0000045984766,0.000024670106],"genre_scores_gemma":[0.59605724,0.0018594069,0.000064992324,0.0012050986,0.00016754607,0.0010661562,0.3995136,0.000015814436,0.000050130275],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990057,0.0003655224,0.00034862847,0.00015833984,0.000012396515,0.000109431916],"domain_scores_gemma":[0.9945184,0.00505663,0.00018210021,0.00011932604,0.00011029769,0.0000132325],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010262946,0.00008488371,0.00033619837,0.000021454283,0.00005017394,0.000001977122,0.00011454162,0.000056879595,0.8254593],"category_scores_gemma":[0.023875346,0.00005673513,0.000040342842,0.00015926883,0.0000070121205,0.000057774534,0.00008356062,0.00017331299,0.000025543583],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014081652,0.00000772605,0.0003144922,0.00055385125,0.000028361392,0.0000010166244,0.00007595889,0.000010992261,0.000120774785,7.8993384e-7,0.9969624,0.001909553],"study_design_scores_gemma":[0.00044868368,0.00029092043,0.1057215,0.22299781,0.0001343185,0.00012943911,0.0011001687,0.002029785,0.00023190776,0.000011471755,0.6664111,0.0004928942],"about_ca_topic_score_codex":0.010551326,"about_ca_topic_score_gemma":0.0154207405,"teacher_disagreement_score":0.8254338,"about_ca_system_score_codex":0.000016804817,"about_ca_system_score_gemma":0.00019135937,"threshold_uncertainty_score":0.9960375},"labels":[],"label_agreement":null},{"id":"W6976795930","doi":"10.60692/vjw51-j0j55","title":"Three Epidemics of Invasive Multidrug-ResistantSalmonellaBloodstream Infection in Blantyre, Malawi, 1998–2014","year":2015,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Blood culture; Epidemiology; Cerebrospinal fluid; Meningitis; Outbreak; Pandemic","score_opus":0.04259926964434123,"score_gpt":0.23076706471446162,"score_spread":0.18816779507012038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976795930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957584,0.000022125307,0.00134868,0.000013660619,0.0011473013,0.00034307045,0.00013683329,0.00010182957,0.00112811],"genre_scores_gemma":[0.999664,0.0000024813357,0.000065717526,0.000015935759,0.000039194612,0.000039811282,0.000103774626,0.000008838518,0.000060216713],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986636,0.00011454059,0.0008205578,0.00013551762,0.000033955497,0.00023184123],"domain_scores_gemma":[0.99901134,0.000026326126,0.00045675022,0.000286395,0.00018453799,0.000034670236],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046811704,0.00018006527,0.0003627295,0.0003727714,0.00006343559,0.000026415877,0.00010234407,0.00027486563,0.000027243446],"category_scores_gemma":[0.00008052431,0.00015035129,0.00007147372,0.00023920319,0.000048796992,0.00047917207,0.000059987124,0.00013495533,0.0011566256],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020161177,0.000011456777,0.9905133,0.00016899685,0.00007201537,5.813733e-7,0.007287658,0.00014660635,0.00058718916,0.00014266573,0.0006882463,0.00017965821],"study_design_scores_gemma":[0.008481169,0.0003501457,0.93228453,0.00054583064,0.00010981585,0.00022565069,0.007929808,0.00040234748,0.045747295,0.000023664665,0.0033091367,0.0005906018],"about_ca_topic_score_codex":0.0012486649,"about_ca_topic_score_gemma":0.0001541665,"teacher_disagreement_score":0.05822878,"about_ca_system_score_codex":0.00010504095,"about_ca_system_score_gemma":0.00006831663,"threshold_uncertainty_score":0.9996211},"labels":[],"label_agreement":null},{"id":"W6977036011","doi":"10.6084/m9.figshare.27750148.v1","title":"Additional file 1 of Probiotic bacteria-released extracellular vesicles enhance macrophage phagocytosis in polymicrobial sepsis by activating the FPR1/2 pathway","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"","keywords":"Probiotic; Macrophage; Phagocytosis; Extracellular vesicles; Extracellular; Sepsis; Inflammation","score_opus":0.0117907335295169,"score_gpt":0.22221933460746612,"score_spread":0.21042860107794922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977036011","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036015753,0.0013053875,4.8600657e-7,0.00006397137,0.00017023984,0.00022229658,0.9619731,0.00006913998,0.00017963235],"genre_scores_gemma":[0.2968622,0.0000035619262,0.00002709721,0.000027556538,0.00008830645,0.00046103273,0.6998977,0.000023893477,0.0026086508],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990086,0.00012725631,0.00030037586,0.0002824025,0.000019718416,0.00026162426],"domain_scores_gemma":[0.9985594,0.0010776013,0.00011689871,0.00018278127,0.00004820155,0.000015083148],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000036982212,0.00017842086,0.00019913194,0.00008092499,0.00013752982,0.00005541331,0.00018010556,0.00019812825,0.98419195],"category_scores_gemma":[0.00051013957,0.000137239,0.000113903734,0.000285534,0.000026978265,0.00015783384,0.00007750694,0.00028337003,0.0024418563],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012421944,0.000043009648,4.1308505e-7,0.000058643716,0.000030403959,0.0000014530523,0.00004013889,2.741936e-7,0.4836841,0.0000014626243,0.51255524,0.0035724402],"study_design_scores_gemma":[0.00010476563,0.000031942738,0.00029744869,0.0012523218,0.0000041299086,0.00001357192,0.000022826378,0.000005804935,0.44620568,0.0000027357974,0.5519613,0.00009745553],"about_ca_topic_score_codex":0.00004362306,"about_ca_topic_score_gemma":0.000018760393,"teacher_disagreement_score":0.9817501,"about_ca_system_score_codex":0.000042505093,"about_ca_system_score_gemma":0.00011347485,"threshold_uncertainty_score":0.9983349},"labels":[],"label_agreement":null},{"id":"W6977045172","doi":"10.6084/m9.figshare.24070089","title":"Additional file 1 of Impact of national recommendations for routine pertussis vaccination during pregnancy on infant pertussis in Ontario, Canada: a population-based time-series study","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; Institute for Clinical Evaluative Sciences; Public Health Ontario; University of Toronto","funders":"","keywords":"Pregnancy; Pertussis vaccine; Vaccination; MEDLINE; Whooping cough; Population","score_opus":0.026613408986426938,"score_gpt":0.2667146699532953,"score_spread":0.24010126096686835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977045172","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08874024,0.000004420267,3.6146695e-8,0.0000736257,0.000042484804,0.0003723425,0.91063136,0.000020377602,0.00011510339],"genre_scores_gemma":[0.40056285,1.2225952e-7,0.000012696055,0.000003320802,0.000009377999,0.0008625234,0.5975081,0.000006442464,0.0010346038],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9993328,0.00005018109,0.00030078148,0.00015071403,0.00003514926,0.00013036963],"domain_scores_gemma":[0.9985521,0.0009129068,0.00019095531,0.00009289215,0.00024025564,0.000010934257],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000024129047,0.000105209656,0.0001855457,0.00023778559,0.00012295679,0.000006264206,0.00006570268,0.00007230539,0.96089894],"category_scores_gemma":[0.0014570905,0.00009415564,0.00008467229,0.00025699497,0.0000020345356,0.000101319834,0.000023406104,0.00008132242,0.00006855222],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009810371,0.0002027567,0.005954445,0.000030039519,0.0000797729,2.6947788e-7,0.00009346753,0.00023548958,0.00024030056,0.0000018237895,0.99281454,0.00024898988],"study_design_scores_gemma":[0.00074258813,0.0002418094,0.9824849,0.0008211307,0.000005772138,0.0000016880641,0.000042375133,0.000061832354,0.00024873478,0.0000062310373,0.015248317,0.00009466655],"about_ca_topic_score_codex":0.2129624,"about_ca_topic_score_gemma":0.74555254,"teacher_disagreement_score":0.97756624,"about_ca_system_score_codex":0.00035012446,"about_ca_system_score_gemma":0.00082689384,"threshold_uncertainty_score":0.7922785},"labels":[],"label_agreement":null},{"id":"W6983293576","doi":"","title":"Making Peace with the Earth (2014-04-08)","year":2014,"lang":"en","type":"other","venue":"University of Minnesota Digital Conservancy (University of Minnesota)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Earth (classical element); Earth observation; Earth system science; Earth observation satellite; Climate change","score_opus":0.011664522675215791,"score_gpt":0.18102610969126257,"score_spread":0.16936158701604678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6983293576","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29336447,0.005464264,0.00312312,0.0042156586,0.0015016574,0.0016671453,0.0030412897,0.00066277495,0.6869596],"genre_scores_gemma":[0.20009023,0.00094616413,0.0004462089,0.00004267473,0.0000793896,1.4498332e-7,0.00039120548,0.00017599949,0.797828],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986152,0.00016228847,0.00017288899,0.00055215677,0.00007992184,0.00041754558],"domain_scores_gemma":[0.99797344,0.00019929178,0.0007612235,0.0007745305,0.00024058328,0.00005095369],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00013769719,0.00044100714,0.0008345057,0.00038348572,0.00039394698,0.000022665337,0.0008993603,0.000569965,0.0065010665],"category_scores_gemma":[0.000021374655,0.00043166973,0.00032482255,0.00030883332,0.0012293668,0.00031663527,0.0003949518,0.0003690822,0.0008313831],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083815394,0.00026860094,0.0032292963,0.00028096777,0.0011319417,0.000046078432,0.0008030277,0.00000396352,0.0022528714,0.0010337253,0.9865325,0.0035788557],"study_design_scores_gemma":[0.0021138052,0.00031869073,0.0024499611,0.00040578833,0.00036424457,0.00008103738,0.0038098912,0.00000345733,0.00007335642,0.000008318545,0.98990375,0.00046768738],"about_ca_topic_score_codex":0.0012891925,"about_ca_topic_score_gemma":0.005160615,"teacher_disagreement_score":0.11086836,"about_ca_system_score_codex":0.000033045166,"about_ca_system_score_gemma":0.00015595397,"threshold_uncertainty_score":0.9999466},"labels":[],"label_agreement":null},{"id":"W6987491878","doi":"","title":"Structure analysis of the lipopolysaccharide epitopes expressed by Haemophilus influenzae non-typeable strain 176","year":2002,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Strain (injury); Haemophilus influenzae; Lipopolysaccharide; Epitope; Pasteurellaceae","score_opus":0.011458053281610267,"score_gpt":0.22375608042445508,"score_spread":0.21229802714284482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6987491878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968876,0.00030433675,0.00002803396,0.00038126463,0.0005287803,0.000115711984,0.0005719623,0.00002624675,0.001156059],"genre_scores_gemma":[0.9978746,0.00004335915,0.000038901217,0.00011914973,0.00003748533,0.000006129504,0.000041353545,0.0000094746365,0.0018295062],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992397,0.00008818835,0.00025060313,0.00019284275,0.00002046863,0.00020820156],"domain_scores_gemma":[0.99933606,0.000052519925,0.00013555858,0.00040118804,0.000059342357,0.000015311783],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000062756786,0.00013461032,0.00030695493,0.00011161205,0.00016776456,0.000016670434,0.00025022108,0.00019223141,0.011755428],"category_scores_gemma":[0.000041271913,0.00009080219,0.00016332272,0.00038058872,0.0000948433,0.00007789959,0.000070733826,0.00018412937,0.000037983587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014212391,0.0000549288,0.0025971544,0.0000053878066,0.000647443,1.2920512e-7,0.00021109253,0.000039397157,0.9800588,0.0001743194,0.014075578,0.0021215498],"study_design_scores_gemma":[0.0006426046,0.00005929558,0.016150355,0.000013523051,0.00060314726,0.000006115291,0.00006239705,0.000096600765,0.94587165,0.00050543767,0.03580903,0.00017986086],"about_ca_topic_score_codex":0.00027437153,"about_ca_topic_score_gemma":0.000105356885,"teacher_disagreement_score":0.034187175,"about_ca_system_score_codex":0.0000124504395,"about_ca_system_score_gemma":0.0000091183665,"threshold_uncertainty_score":0.98914796},"labels":[],"label_agreement":null},{"id":"W6989578196","doi":"","title":"Biosynthesis of cryptic lipopolysaccharide glycoforms in Haemophilus influenzae involves a mechanism similar to that required for O-antigen synthesis.: J.Bacteriol.","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biosynthesis; Mechanism (biology); Lipopolysaccharide; Haemophilus influenzae; Bacteria","score_opus":0.02900897814635035,"score_gpt":0.2567417477110077,"score_spread":0.22773276956465738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6989578196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99662143,0.00009705418,0.0004999099,0.0010224516,0.00068663224,0.0007013872,0.000109868255,0.000076833414,0.0001844422],"genre_scores_gemma":[0.99719685,0.00009013609,0.0020566727,0.00020465399,0.000059605565,0.00025630678,0.000016604434,0.00003567516,0.00008348672],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854773,0.000063601685,0.0005020298,0.00037277717,0.000028932069,0.00048494758],"domain_scores_gemma":[0.9990548,0.00023176374,0.00017455222,0.00040131027,0.0000909689,0.000046598652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031992875,0.0002643364,0.00057679776,0.00038806102,0.00014504028,0.000023919294,0.00028884708,0.0003276924,0.00048739003],"category_scores_gemma":[0.00043450904,0.00022546803,0.00018614593,0.00020792973,0.00007782815,0.00020618625,0.000109089895,0.00012275096,0.000110762776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041625937,0.00016813837,0.000515242,0.000051364037,0.00013128784,0.0000013030308,0.00042222132,0.000009767954,0.98676544,0.008772227,0.00009282473,0.0026539112],"study_design_scores_gemma":[0.0010566147,0.00028654258,0.0030856922,0.0002011968,0.00005452505,0.000016270234,0.0002116665,0.0000022405236,0.97640276,0.014909121,0.0035034842,0.0002698831],"about_ca_topic_score_codex":0.00036695838,"about_ca_topic_score_gemma":0.00021553818,"teacher_disagreement_score":0.010362689,"about_ca_system_score_codex":0.00009062345,"about_ca_system_score_gemma":0.00009697119,"threshold_uncertainty_score":0.9194319},"labels":[],"label_agreement":null},{"id":"W6990156226","doi":"","title":"Control of invasive meningococcal disease: is it achievable?","year":2016,"lang":"en","type":"article","venue":"Oxford University Research Archive (ORA) (University of Oxford)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Meningococcal vaccine; Vaccination; Immunization; Incidence (geometry); Meningitis; Disease; Conjugate vaccine","score_opus":0.025450646010225873,"score_gpt":0.2538857461473395,"score_spread":0.22843510013711363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6990156226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.971775,0.00009373123,0.0087483,0.005358797,0.00016925755,0.0005869097,0.0020186072,0.000052136224,0.011197264],"genre_scores_gemma":[0.9848779,0.0012891209,0.00025332207,0.0000264659,0.000023291483,3.1306402e-7,0.00006924198,0.00001398852,0.013446359],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979484,0.00064598763,0.00018294858,0.00046945587,0.000116472474,0.00063674536],"domain_scores_gemma":[0.99770236,0.0008748257,0.00020561164,0.00052672194,0.0005164115,0.00017409396],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046486524,0.00020724192,0.00046411136,0.00073617586,0.0007299511,0.000009060472,0.00090311596,0.00018630945,0.0034063214],"category_scores_gemma":[0.00016899695,0.00019907978,0.00029726123,0.0005014147,0.0014402615,0.00047310436,0.0006768936,0.00037560824,0.00007655011],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009585776,0.00067942246,0.056895614,0.00016738827,0.0011088422,0.00006463721,0.0019477956,0.000006057241,0.8619593,0.02203356,0.038593188,0.006958419],"study_design_scores_gemma":[0.009836662,0.0013153516,0.062163565,0.00033044055,0.0002133457,0.000015392245,0.006330116,0.000024844807,0.010742969,0.0015303819,0.9070511,0.00044583643],"about_ca_topic_score_codex":0.00090509496,"about_ca_topic_score_gemma":0.0005905281,"teacher_disagreement_score":0.8684579,"about_ca_system_score_codex":0.00012604379,"about_ca_system_score_gemma":0.00042605263,"threshold_uncertainty_score":0.9975047},"labels":[],"label_agreement":null},{"id":"W6991797659","doi":"","title":"Identification of a gene ( lpt-3 ) required for the addition of phosphoethanolamine to the lipopolysaccharide inner core of Neisseria meningitidis and its role in mediating susceptibility to bactericidal killing and opsonophagocytosis: Molecular Microbiol.","year":2002,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Lipopolysaccharide; Identification (biology); Gene; Core (optical fiber); Lipid A","score_opus":0.017188122205985385,"score_gpt":0.24383983402964468,"score_spread":0.22665171182365929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6991797659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99766326,0.00076236285,0.0002858653,0.0003569543,0.00015866618,0.0005471882,0.00021509107,0.0000062329673,0.0000043635264],"genre_scores_gemma":[0.9995149,0.00007564073,0.00021050124,0.0000220705,0.000019317347,0.00009110005,0.00003591637,0.000008375437,0.000022201504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919915,0.00005798436,0.00042066973,0.00018150338,0.000013485585,0.00012721987],"domain_scores_gemma":[0.99931055,0.00015317251,0.00020675547,0.00017652028,0.00014001527,0.000012968378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034660456,0.00009342031,0.00021158415,0.000073424,0.000076011565,0.0000075861053,0.000097458586,0.000082447325,0.00010072396],"category_scores_gemma":[0.00022568091,0.00006572646,0.000036808964,0.0001676972,0.000045643945,0.00006134786,0.00005263909,0.00005709235,0.0000013813956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012638087,0.000049898696,0.0006359844,0.000031248477,0.000042255724,2.7377888e-8,0.0013909166,0.0000146223165,0.9943148,0.00009903363,0.000030415642,0.003264417],"study_design_scores_gemma":[0.00043206947,0.00017089202,0.0076762643,0.00004014395,0.00003957826,0.0000047435515,0.0004308794,0.00027039007,0.99074954,0.000052600437,0.000070248076,0.00006262769],"about_ca_topic_score_codex":0.00010605346,"about_ca_topic_score_gemma":0.00007639814,"teacher_disagreement_score":0.00704028,"about_ca_system_score_codex":0.000012993601,"about_ca_system_score_gemma":0.000008309058,"threshold_uncertainty_score":0.2680247},"labels":[],"label_agreement":null},{"id":"W6992364469","doi":"","title":"Le processus d'empowerment dans le domaine de la rÃ©adaptation et de l'intÃ©gration sociale des personnes atteintes d'un traumatisme cranio-cÃ©rÃ©bral","year":2000,"lang":"fr","type":"other","venue":"Library and Archives Canada (Government of Canada)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Nucleofection; Gestational period; TSG101; Dysgeusia; Diafiltration; Liquation; Emperipolesis; Triacetin; Fusible alloy","score_opus":0.0031059371252822672,"score_gpt":0.16492551318021464,"score_spread":0.16181957605493238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6992364469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49866617,0.0018499371,0.002863768,0.0044564023,0.00046036742,0.0004400491,0.00068730995,0.000036558762,0.49053946],"genre_scores_gemma":[0.8562061,0.0012525964,0.0018595434,0.00041346657,0.00015970902,0.000040825795,0.00013527213,0.000082870676,0.1398496],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980247,0.00063920993,0.0003930154,0.00033523154,0.00015310333,0.00045472287],"domain_scores_gemma":[0.9991317,0.0003206629,0.00028707608,0.00014784276,0.0000017480746,0.00011098073],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000443415,0.00036823106,0.00044405734,0.000051807117,0.00069676706,0.000061299594,0.00019556,0.00021171839,0.0012052397],"category_scores_gemma":[0.000008239188,0.0003850127,0.00007843083,0.00008269321,0.00041242497,0.0003446991,0.00006148699,0.00028339878,5.966765e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011684684,0.000442182,0.007669296,0.00073661783,0.0008729078,0.000042291424,0.0060629672,0.00020915519,0.6072518,0.32256618,0.0027743902,0.050203707],"study_design_scores_gemma":[0.0049156053,0.0007332376,0.14998382,0.001394805,0.00037577923,0.0003590603,0.033885863,0.0005681246,0.3660139,0.017512344,0.42272913,0.0015282935],"about_ca_topic_score_codex":0.04788009,"about_ca_topic_score_gemma":0.21511759,"teacher_disagreement_score":0.41995475,"about_ca_system_score_codex":0.000036298272,"about_ca_system_score_gemma":0.0044244076,"threshold_uncertainty_score":0.99986017},"labels":[],"label_agreement":null},{"id":"W6992901883","doi":"","title":"Metodología para el establecimiento del ensayo de potencia de la\\nvacuna antipertussis de células completas","year":2010,"lang":"en","type":"article","venue":"TSpace (University of Toronto)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Potency; Linear regression; Regression analysis; Strain (injury); Effective dose (radiation); Logarithm","score_opus":0.01712311588025554,"score_gpt":0.26069117391660723,"score_spread":0.2435680580363517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6992901883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877878,0.00036232124,0.0024749546,0.0005011812,0.00029819674,0.000092579416,0.000030640997,0.00007320427,0.00837913],"genre_scores_gemma":[0.9927635,0.00021986017,0.003769498,0.000048462603,0.000037603797,4.7759966e-7,0.000024504448,0.000010837412,0.003125211],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990118,0.00027011687,0.00008859147,0.00021431665,0.000018454957,0.00039670576],"domain_scores_gemma":[0.9992836,0.0001783011,0.00010771066,0.00028191129,0.00008510435,0.000063363856],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039132583,0.00014603554,0.00027935137,0.000051308587,0.00034226855,0.000013430479,0.00028505136,0.00037109124,0.016777994],"category_scores_gemma":[0.000087317996,0.00016340248,0.0001330049,0.00004896996,0.00023463275,0.00022712235,0.00011753052,0.00025632107,0.000065719214],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015765676,0.00015636568,0.021264909,0.00001180076,0.00016958966,0.0000074707073,0.0033696843,0.0000079370875,0.9655289,0.0011752765,0.0023566415,0.005793759],"study_design_scores_gemma":[0.0015102413,0.00015307235,0.9167526,0.000017373886,0.000206574,0.00021090606,0.004228417,0.00012360275,0.024833774,0.00014071098,0.05153861,0.00028414492],"about_ca_topic_score_codex":0.16881095,"about_ca_topic_score_gemma":0.056043085,"teacher_disagreement_score":0.9406951,"about_ca_system_score_codex":0.00016185084,"about_ca_system_score_gemma":0.00013791848,"threshold_uncertainty_score":0.9841208},"labels":[],"label_agreement":null},{"id":"W6996694812","doi":"","title":"Structural and genetic characterisation of variant glycoforms of Haemophilus influenzae lipopolysacchride; implications for virulence.: Res.J.Microbiology","year":2006,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Bacteria; Strain (injury); Mutation; Genome","score_opus":0.0132026105629724,"score_gpt":0.24490817773547036,"score_spread":0.23170556717249796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6996694812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980959,0.00022027543,0.00032274053,0.00024753727,0.00031403493,0.00030008002,0.00039597577,0.000019572431,0.00008382519],"genre_scores_gemma":[0.9989177,0.00004067905,0.00065667473,0.000020431182,0.00006249603,0.000026520018,0.00020237149,0.000009329022,0.00006380604],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921036,0.00003711803,0.0004045493,0.00017362768,0.0000051255543,0.00016920349],"domain_scores_gemma":[0.9993446,0.00007570251,0.0002474583,0.00019194344,0.00013071483,0.000009567037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067525674,0.00010881137,0.00025082065,0.00009926424,0.00010898497,0.0000062183854,0.00008853852,0.00017154413,0.00014198208],"category_scores_gemma":[0.000030134514,0.00008990276,0.000057443216,0.00008359129,0.00015383844,0.000071820396,0.000040321003,0.000060228966,0.000003483733],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111570895,0.000028778935,0.0077520926,0.000028205908,0.00004189781,5.457495e-8,0.000049228314,0.000003439661,0.98198175,0.0058000265,0.00021362297,0.003989303],"study_design_scores_gemma":[0.0010710027,0.0002644541,0.5675387,0.00001605033,0.00005714201,0.0001958981,0.000014983638,0.0000091218735,0.4182456,0.010012541,0.0024468226,0.00012769192],"about_ca_topic_score_codex":0.00028067964,"about_ca_topic_score_gemma":0.000056601046,"teacher_disagreement_score":0.56373614,"about_ca_system_score_codex":0.000011873064,"about_ca_system_score_gemma":0.00003059692,"threshold_uncertainty_score":0.36661282},"labels":[],"label_agreement":null},{"id":"W6999758987","doi":"","title":"Development, characterization, and functional activity of a panel of specific monoclonal antibodies to inner core lipopolysaccharide epitopes in Neisseria meningitidis: Infect.Immun.","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Monoclonal antibody; Neisseria meningitidis; Epitope; Neisseriaceae; Lipopolysaccharide; Antibody; Immunofluorescence; Meningococcal disease","score_opus":0.036309100525019275,"score_gpt":0.24675460054455492,"score_spread":0.21044550001953566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6999758987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986739,0.00006337136,0.0004818943,0.000113289425,0.000376436,0.00015408029,0.00003686972,0.000018770668,0.00008138861],"genre_scores_gemma":[0.9990598,0.00009063572,0.00059230777,0.0000130692515,0.000028370898,0.000020709183,0.00008347613,0.000009494656,0.00010216494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928284,0.000032054024,0.00031843633,0.00018758595,0.000016330785,0.00016273471],"domain_scores_gemma":[0.99960256,0.00003606682,0.00013804594,0.00011610739,0.000090102854,0.000017098564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011773785,0.00013208277,0.00028432018,0.00020356283,0.00008222506,0.000009093623,0.00005674476,0.00010991429,0.0003814152],"category_scores_gemma":[0.00003539703,0.00012220777,0.000031166583,0.00016768716,0.0000748181,0.0001471901,0.000077382276,0.00010404117,0.000014812869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023507219,0.00016606793,0.03818569,0.000022264647,0.000059584392,2.661794e-7,0.000580647,0.000006188379,0.9535791,0.0018834193,0.000022381446,0.0052592773],"study_design_scores_gemma":[0.00051180256,0.00005360336,0.49282724,0.000045226418,0.0000050511026,0.000012267904,0.000038095677,3.2486264e-7,0.50461125,0.0001271937,0.001691041,0.00007691705],"about_ca_topic_score_codex":0.00010936364,"about_ca_topic_score_gemma":0.00008528793,"teacher_disagreement_score":0.45464155,"about_ca_system_score_codex":0.000027203565,"about_ca_system_score_gemma":0.0000774929,"threshold_uncertainty_score":0.49834883},"labels":[],"label_agreement":null},{"id":"W6999895260","doi":"","title":"Differential antigen expression among strains of Bacille Calmette-Guérin","year":2007,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Helse Vest","keywords":"Antigen; Expression (computer science); Differential (mechanical device); Gene expression; Gene; Bacteria","score_opus":0.015255433812937775,"score_gpt":0.2585378996076028,"score_spread":0.24328246579466503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6999895260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97162616,0.00030968324,8.258895e-7,0.0000024894393,0.0050888825,0.00056325906,0.0017295275,0.00017921624,0.020499932],"genre_scores_gemma":[0.9823731,0.00024332789,0.000065910004,0.000015394684,0.00007736077,0.00005158879,0.0043785702,0.0001305978,0.012664153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966858,0.00038624625,0.0011624612,0.00088575506,0.000113256894,0.0007664591],"domain_scores_gemma":[0.99781185,0.00014494605,0.0008332465,0.0007196864,0.00038326424,0.00010698803],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003937088,0.0007547638,0.0010596933,0.0006085705,0.0009318421,0.000033815308,0.00053845457,0.0020170063,0.004878174],"category_scores_gemma":[0.00023248274,0.00071204617,0.00053317094,0.00037515027,0.00012773136,0.0003786885,0.00015296332,0.0015227078,0.00029986052],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033480913,0.0003697503,0.0004596098,0.00016471834,0.00035576223,0.00000694376,0.000011724562,0.0000018550581,0.96445376,0.002629516,0.000035629342,0.03117592],"study_design_scores_gemma":[0.0015863943,0.00024338326,0.046217557,0.00040976025,0.00018508895,0.00002070366,0.00023046556,4.2693833e-7,0.9205263,0.0004158701,0.029432284,0.00073174236],"about_ca_topic_score_codex":0.001049985,"about_ca_topic_score_gemma":0.0020419203,"teacher_disagreement_score":0.045757946,"about_ca_system_score_codex":0.00016029118,"about_ca_system_score_gemma":0.00004347143,"threshold_uncertainty_score":0.99953306},"labels":[],"label_agreement":null},{"id":"W7000228173","doi":"","title":"Enhanced surveillance of invasive meningococcal disease in Canada, 2006-2011","year":2014,"lang":"en","type":"article","venue":"PubMed Central","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Neisseria meningitidis; Disease; Meningococcal Infections; Meningococcal vaccine","score_opus":0.007009047312121011,"score_gpt":0.18497116327755897,"score_spread":0.17796211596543796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7000228173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976145,0.00018646436,0.00004658866,0.00015782997,0.0014549459,0.00016428395,0.00007344613,0.000010745595,0.0002912003],"genre_scores_gemma":[0.99954295,0.000028094326,0.0000037179548,0.000036427355,0.000064785854,0.000050805014,0.00005896073,0.000006090336,0.0002081702],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99890476,0.000120013116,0.00020064457,0.00014849416,0.000012001795,0.0006140589],"domain_scores_gemma":[0.99960685,0.000086998014,0.00007258168,0.00013759498,0.00002585681,0.00007010574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013786771,0.0000901884,0.00018811836,0.000038412505,0.000031476415,0.0000035499809,0.00009287065,0.000049359878,0.0003628389],"category_scores_gemma":[0.00016173613,0.000081950406,0.000032951262,0.00006201945,0.000034559205,0.0000415221,0.00002674135,0.00009306429,0.00001454746],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018846939,0.000065904074,0.9172591,0.000019535879,0.000035854668,7.4497535e-7,0.00006856002,0.000052785774,0.07643904,0.00036757538,0.001602265,0.0039001557],"study_design_scores_gemma":[0.0006692926,0.000012547418,0.9486805,0.0000061520996,0.000005148073,0.0000011348957,0.00001338457,0.0000030666113,0.04505515,0.000026121306,0.0054394267,0.000088075605],"about_ca_topic_score_codex":0.5207273,"about_ca_topic_score_gemma":0.8703752,"teacher_disagreement_score":0.34964797,"about_ca_system_score_codex":0.00014534242,"about_ca_system_score_gemma":0.00040096117,"threshold_uncertainty_score":0.48246425},"labels":[],"label_agreement":null},{"id":"W7007934022","doi":"","title":"Analysis of bacterial glycolipids by capillary electrophoresis-electrospray mass spectrometry : Hamephilus influenzae and Neisseria meningitidis lipopolysaccharide.","year":2003,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Glycolipid; Mass spectrometry; Neisseria; Neisseriaceae; Bacteria","score_opus":0.005586705892205452,"score_gpt":0.21904191761553,"score_spread":0.21345521172332454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7007934022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957686,0.0016714009,0.0002497799,0.000070205366,0.0005589142,0.0001601264,0.00009104401,0.00005823082,0.0013716829],"genre_scores_gemma":[0.9984463,0.000550835,0.00032740258,0.00004157946,0.000056785364,0.000021755024,0.00015637132,0.000026127705,0.0003728497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983604,0.00022886257,0.00046395956,0.0004128108,0.000028144288,0.00050585065],"domain_scores_gemma":[0.9991919,0.0001028887,0.00021233068,0.0003472786,0.00009262028,0.000052995114],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023676503,0.00027773628,0.0006861496,0.00047951832,0.0001953744,0.00004464637,0.00014188826,0.00029781344,0.0065525486],"category_scores_gemma":[0.00011451285,0.0002590417,0.00018966643,0.00083489507,0.0001267027,0.00013148716,0.000036192396,0.00024143604,0.00002208057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023729117,0.00008723984,0.0076998416,0.0000103328375,0.0017558424,5.506606e-7,0.00006731674,0.0000011141848,0.9850067,0.0023710064,0.0025507354,0.00021201964],"study_design_scores_gemma":[0.00103789,0.00048414737,0.005842501,0.0000068322693,0.0009314412,0.000036265756,0.000046783396,0.0000049460045,0.967135,0.00052982685,0.023646016,0.00029835536],"about_ca_topic_score_codex":0.00018382914,"about_ca_topic_score_gemma":0.000054083284,"teacher_disagreement_score":0.02109528,"about_ca_system_score_codex":0.000055008735,"about_ca_system_score_gemma":0.00006887142,"threshold_uncertainty_score":0.9999862},"labels":[],"label_agreement":null},{"id":"W7008467376","doi":"","title":"Caracterização fenotípica e molecular de neisseria gonorrhoeae isoladas no Rio de Janeiro, 2002–2003","year":2004,"lang":"pt","type":"article","venue":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria gonorrhoeae; Tetracycline; Gonorrhea; Neisseriaceae; Ciprofloxacin; Antibiotic resistance; Serotype; Antibiotics; Molecular epidemiology","score_opus":0.014674486671188012,"score_gpt":0.23855000482686817,"score_spread":0.22387551815568016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7008467376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9204695,0.003856044,0.006917161,0.013472667,0.009162116,0.001494887,0.0004876541,0.00073738734,0.043402575],"genre_scores_gemma":[0.99149936,0.00079610234,0.0015674707,0.0006591445,0.0010105427,0.00027562157,0.000605779,0.00015873119,0.0034272526],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9938288,0.0011117262,0.0013862249,0.0014076562,0.00013284382,0.0021327964],"domain_scores_gemma":[0.99604356,0.00016958037,0.00077358884,0.0012416149,0.0011240626,0.00064756186],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00081629277,0.0011526616,0.0011734227,0.0006104482,0.0016327051,0.00047528345,0.0010578262,0.0022546803,0.00086855417],"category_scores_gemma":[0.0010297586,0.0012112631,0.0005649624,0.0012101519,0.00008211315,0.00066598365,0.00043944674,0.0018464376,0.0005585235],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012844598,0.0020906585,0.0010122278,0.00021876863,0.0011214762,0.0001751756,0.0021744797,0.00020199355,0.71400994,0.27355206,0.0030762826,0.0010824569],"study_design_scores_gemma":[0.0038858387,0.00046830348,0.017123977,0.00033036014,0.00044756473,0.0060870848,0.0003433764,0.000060105616,0.019938277,0.00021043267,0.94983697,0.0012677133],"about_ca_topic_score_codex":0.0000619203,"about_ca_topic_score_gemma":0.000511112,"teacher_disagreement_score":0.94676065,"about_ca_system_score_codex":0.0020111685,"about_ca_system_score_gemma":0.002980456,"threshold_uncertainty_score":0.99966705},"labels":[],"label_agreement":null},{"id":"W7008542276","doi":"","title":"Characterization of novel structure features in the lipopolysaccharide of non-disease assciated nontypeable Haemophilus influenzae .","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Lipopolysaccharide; Bacteria; Pasteurellaceae","score_opus":0.010439341159695381,"score_gpt":0.2404030962320307,"score_spread":0.22996375507233532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7008542276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99863863,0.000039583792,0.00007193258,0.00033025333,0.0003467044,0.0001968647,0.00017297,0.000011241118,0.00019180935],"genre_scores_gemma":[0.99958915,0.000012977513,0.000054150063,0.000081212114,0.000034368728,0.00000761603,0.00014682834,0.0000072503044,0.00006644375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994463,0.000046655372,0.00023317455,0.000120001816,0.000019582483,0.00013433986],"domain_scores_gemma":[0.99953413,0.000022532342,0.00014725492,0.0002070225,0.000078571364,0.000010471975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010677136,0.000098272314,0.0001851941,0.00010298946,0.000055370252,0.000007540658,0.0001506099,0.00013268886,0.00020787794],"category_scores_gemma":[0.000048843423,0.00006879326,0.000047861282,0.00018579743,0.000057887984,0.00009208893,0.000029102262,0.000149259,0.000004866911],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000120340774,0.00018093231,0.0027060194,0.000020503448,0.000030136554,4.3168114e-7,0.000315357,0.000050269187,0.99506605,0.001185775,0.00004037703,0.0002838045],"study_design_scores_gemma":[0.0014347268,0.00007046667,0.3762894,0.000050256076,0.00002903974,0.000011306791,0.00003482108,0.0000027728772,0.6209633,0.00071993575,0.000316516,0.00007749992],"about_ca_topic_score_codex":0.0004169388,"about_ca_topic_score_gemma":0.00017052528,"teacher_disagreement_score":0.3741028,"about_ca_system_score_codex":0.000015450314,"about_ca_system_score_gemma":0.00006828959,"threshold_uncertainty_score":0.28053078},"labels":[],"label_agreement":null},{"id":"W7009990691","doi":"","title":"Glycine is a common substitute of the lipopolysaccharide of Haemophilus influenzae","year":2001,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipopolysaccharide; Haemophilus influenzae; Glycine; Bacteria; Strain (injury)","score_opus":0.01830653745402559,"score_gpt":0.25485933264196653,"score_spread":0.23655279518794095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7009990691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99554783,0.0001941436,0.0000093078625,0.00063598866,0.00082041486,0.0001006008,0.000027416998,0.000016243283,0.0026480446],"genre_scores_gemma":[0.9989429,0.00006557539,0.000020322099,0.000121970326,0.000039741764,0.0000045416896,0.0000044977946,0.000005762196,0.0007946623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994771,0.000047093457,0.00024505824,0.00009364562,0.000012381349,0.00012474979],"domain_scores_gemma":[0.99944955,0.000035715726,0.00013324192,0.00030778517,0.00006580439,0.000007916332],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007338723,0.000080708625,0.00021001622,0.000046437242,0.000077178156,0.000002722156,0.00016625276,0.00010841163,0.0016759654],"category_scores_gemma":[0.000026410517,0.00005358472,0.00008947314,0.000134157,0.00012696031,0.000044761455,0.00007225099,0.000111684734,0.000039384704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010530333,0.00007553263,0.028878808,0.000009164873,0.00006574882,2.4613863e-7,0.00012394243,0.000001338277,0.9643847,0.0025168147,0.0021636444,0.001674784],"study_design_scores_gemma":[0.0008093764,0.00009351414,0.041973863,0.00003312785,0.000040984083,0.00006952606,0.000024601411,0.000001848539,0.89427704,0.0013383671,0.06126506,0.000072716444],"about_ca_topic_score_codex":0.0005549836,"about_ca_topic_score_gemma":0.00012791509,"teacher_disagreement_score":0.070107654,"about_ca_system_score_codex":0.000007794184,"about_ca_system_score_gemma":0.000023265216,"threshold_uncertainty_score":0.99923664},"labels":[],"label_agreement":null},{"id":"W7010452667","doi":"","title":"Immunogenicity of a tetravalent meningococcal glycoconjugate vaccine in infants: a randomized controlled trial.","year":2008,"lang":"en","type":"article","venue":"Oxford University Research Archive (ORA) (University of Oxford)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Reactogenicity; Neisseria meningitidis; Immunogenicity; Immunization; Meningococcal disease; Meningococcal vaccine","score_opus":0.020381287615025702,"score_gpt":0.2528516400454812,"score_spread":0.23247035243045552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7010452667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98722243,0.00026042823,0.0006742958,0.0002494803,0.00022256648,0.0030959495,0.00014716708,0.00004501879,0.008082662],"genre_scores_gemma":[0.9909989,0.004668127,0.00042985365,0.0000046771684,0.000021194463,0.0000032191854,0.0000920585,0.000014939168,0.00376703],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99582404,0.0023171548,0.0005369651,0.0004864345,0.00014348916,0.0006919019],"domain_scores_gemma":[0.9968817,0.0015959033,0.00043756308,0.0005061177,0.0004806066,0.00009810941],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019925898,0.0002808676,0.0019190523,0.0015494806,0.000699435,0.000007756408,0.0008593528,0.00027773005,0.0010637764],"category_scores_gemma":[0.00046280207,0.00028910686,0.0007424141,0.0009325984,0.0013337702,0.00037025576,0.0006849094,0.00081166346,0.000015279513],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9257016,0.00090707594,0.003845996,0.000046424193,0.0010142303,0.00005941596,0.0019909993,0.000017762122,0.062782265,0.002502841,0.0006318077,0.00049958937],"study_design_scores_gemma":[0.9542043,0.001450465,0.00859253,0.000116111514,0.0001772428,0.000044071076,0.0029555343,0.00014014244,0.0014295303,0.00036399558,0.030222584,0.00030348776],"about_ca_topic_score_codex":0.0048789424,"about_ca_topic_score_gemma":0.0015084252,"teacher_disagreement_score":0.061352737,"about_ca_system_score_codex":0.00014927881,"about_ca_system_score_gemma":0.00043544947,"threshold_uncertainty_score":0.99995613},"labels":[],"label_agreement":null},{"id":"W7014331816","doi":"","title":"Persistence of bactericidal antibodies following infant serogroup B meningococcal immunization (4CMenB) and booster dose response at 12, 18 or 24 months of age","year":2015,"lang":"en","type":"article","venue":"Oxford University Research Archive (ORA) (University of Oxford)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Booster dose; Booster (rocketry); Meningococcal vaccine; Persistence (discontinuity); Immunization; Meningococcal disease; Titer; Neisseria meningitidis","score_opus":0.05212024179449356,"score_gpt":0.27294464538627583,"score_spread":0.22082440359178226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7014331816","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99589837,0.000109224566,0.00027422415,0.0001537465,0.0001378468,0.0003838908,0.00021531746,0.000028721652,0.0027986758],"genre_scores_gemma":[0.99211776,0.00053442485,0.0011458099,0.0000033970018,0.000007891828,2.1147522e-7,0.00013641322,0.000012800939,0.006041313],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979565,0.00090936647,0.00021759314,0.00035642376,0.00012226003,0.0004378401],"domain_scores_gemma":[0.99845314,0.00047482084,0.00023280205,0.00038426573,0.00034109494,0.00011388307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086717994,0.00019500972,0.00051780266,0.00073708006,0.0005922851,0.000013576247,0.0005176057,0.00018951135,0.00024238623],"category_scores_gemma":[0.00017842968,0.00020602849,0.00019179401,0.0004944668,0.0011219,0.0005245165,0.0013682407,0.0003296469,0.0000038847274],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03130457,0.00035236488,0.12566671,0.00014104141,0.00063322025,0.00010226947,0.011983098,0.000016505383,0.8265285,0.0004030862,0.0014601849,0.0014084289],"study_design_scores_gemma":[0.01644748,0.0077212746,0.63632834,0.00055020937,0.0004228474,0.00013082426,0.08522327,0.00029193066,0.01950796,0.0002151401,0.23231304,0.0008476974],"about_ca_topic_score_codex":0.0015976976,"about_ca_topic_score_gemma":0.0017353265,"teacher_disagreement_score":0.80702055,"about_ca_system_score_codex":0.00014080573,"about_ca_system_score_gemma":0.00023585331,"threshold_uncertainty_score":0.8401598},"labels":[],"label_agreement":null},{"id":"W7015159675","doi":"","title":"Respiratory viruses do not trigger meningococcal disease in children","year":2007,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Meningococcal disease; Respiratory system; Disease; Vaccination; Pandemic; Virus; Respiratory tract infections; Immune system; Respiratory disease; Antibody","score_opus":0.025545367680558637,"score_gpt":0.29655008009322603,"score_spread":0.2710047124126674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7015159675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963639,0.000075478376,0.00001754637,0.00025313298,0.00017417697,0.00039737925,0.00008548146,0.00008066151,0.0025522946],"genre_scores_gemma":[0.99575925,0.000047367714,0.000009370427,0.00005694269,0.000095415126,0.0000020014643,0.000050779505,0.00001739927,0.003961467],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99802554,0.0004112249,0.0002511372,0.00044627325,0.0000857367,0.00078009727],"domain_scores_gemma":[0.9990302,0.00020244655,0.00006746491,0.0003575614,0.00018621064,0.00015617297],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011756945,0.00017952488,0.00024474462,0.00088969624,0.0004960601,0.00003150537,0.0003324383,0.00026296385,0.0017715654],"category_scores_gemma":[0.00015421059,0.00018278627,0.000119919634,0.0007168777,0.0003262494,0.0003016851,0.00029992315,0.0007858097,0.00039126276],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002821965,0.000726119,0.9145648,0.000018402265,0.0002243507,0.00030652952,0.00019028885,0.0000068577997,0.05795782,0.010293678,0.011137927,0.0017512447],"study_design_scores_gemma":[0.002183924,0.00021654935,0.7850368,0.000033228207,0.000021283004,0.000008028525,0.0003048708,2.1116449e-7,0.008757126,0.00003866264,0.20316195,0.00023737439],"about_ca_topic_score_codex":0.00279508,"about_ca_topic_score_gemma":0.00013954852,"teacher_disagreement_score":0.19202402,"about_ca_system_score_codex":0.00014157032,"about_ca_system_score_gemma":0.00023693402,"threshold_uncertainty_score":0.999141},"labels":[],"label_agreement":null},{"id":"W7020727469","doi":"","title":"Las vacunas conjugadas contra la enfermedad meningococica causadas por los serogrupos A, C, W-135, Y","year":2009,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Meningococcal vaccine; Diphtheria; Diphtheria toxin; Incidence (geometry); Conjugate vaccine; Vaccination","score_opus":0.1479164242695389,"score_gpt":0.5190947847656615,"score_spread":0.37117836049612263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7020727469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9678916,0.014460547,0.00010645112,0.00066544896,0.0017468419,0.00078854134,0.00014194482,0.00012840092,0.014070269],"genre_scores_gemma":[0.99202484,0.0042883945,0.000051505547,0.0006017068,0.00024270284,0.000048294456,0.00008174627,0.00004932357,0.0026114965],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969121,0.0006555552,0.0010876374,0.0005588203,0.000107018,0.00067882054],"domain_scores_gemma":[0.99749315,0.0004876191,0.00085708103,0.00057978753,0.00042452308,0.00015787028],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010068637,0.000504199,0.001173349,0.00060801685,0.0005323607,0.0007955474,0.0017050131,0.00047292284,0.026701532],"category_scores_gemma":[0.00026591777,0.0004370215,0.00031456395,0.0006219523,0.00022065938,0.0014551708,0.00042164148,0.0007823357,0.0001635095],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051472225,0.00058015843,0.040231723,0.000023022603,0.0005883689,0.000031924952,0.00013425194,0.0000074159248,0.8602584,0.0010240738,0.08179487,0.014811074],"study_design_scores_gemma":[0.0024394875,0.00009414029,0.4439792,0.00027853576,0.00023413036,0.00029314862,0.00006986901,0.0000024176654,0.25727147,0.0026093181,0.29207915,0.0006491471],"about_ca_topic_score_codex":0.00088833645,"about_ca_topic_score_gemma":0.000099351666,"teacher_disagreement_score":0.60298693,"about_ca_system_score_codex":0.000085285785,"about_ca_system_score_gemma":0.00020639386,"threshold_uncertainty_score":0.99980813},"labels":[],"label_agreement":null},{"id":"W7021158304","doi":"","title":"Nova Library by Hans Winkler","year":2005,"lang":"en","type":"other","venue":"Arca (British Columbia Electronic Library Network)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nova (rocket); Documentation; National library; Public access","score_opus":0.0037304462810099554,"score_gpt":0.1773315243188779,"score_spread":0.17360107803786792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7021158304","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029601727,0.07595675,0.0000025467593,0.0005097378,0.0034972066,0.000788317,0.0007372248,0.0021143355,0.9160979],"genre_scores_gemma":[0.030965855,0.016893964,0.00012318007,0.0012069992,0.0040784283,0.00012270894,0.007551107,0.001262094,0.93779564],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99626505,0.00029679507,0.0005770583,0.0009895223,0.000043819222,0.0018277492],"domain_scores_gemma":[0.99878216,0.000084261745,0.00033561842,0.0006914898,0.000012140063,0.00009435023],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007522355,0.00050208037,0.000887472,0.00010453668,0.0003381281,0.00082227483,0.0007526468,0.0014894569,0.92197067],"category_scores_gemma":[0.000006012569,0.0008367115,0.00032168825,0.00056625885,0.00020248994,0.0008199582,0.00037806833,0.0013506874,0.0018396587],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029503395,0.0002681968,0.0011407392,0.00003009725,0.00064572546,0.000009553951,0.000004517864,0.000001055191,0.00006479668,0.0028203651,0.9663948,0.028590638],"study_design_scores_gemma":[0.001289937,0.00031463345,0.00010563721,0.00035978635,0.00010982402,0.00031734887,0.0000029056553,0.0000014529606,0.000067627676,0.0054643005,0.99106807,0.00089848245],"about_ca_topic_score_codex":0.005972478,"about_ca_topic_score_gemma":0.032416616,"teacher_disagreement_score":0.920131,"about_ca_system_score_codex":0.000044613604,"about_ca_system_score_gemma":0.00044444174,"threshold_uncertainty_score":0.9998068},"labels":[],"label_agreement":null},{"id":"W7023838866","doi":"","title":"Prevalence of bordetella pertussis and respiratory viruses in children and adults","year":2009,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Bordetella pertussis; Respiratory system; Whooping cough; Respiratory disease; Respiratory tract infections; Virus; Epidemiology","score_opus":0.014736688162629345,"score_gpt":0.26927268806063465,"score_spread":0.2545359998980053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7023838866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984944,0.0003808684,9.747928e-7,0.00016957276,0.000024554529,0.00021256418,0.000057289235,0.000018540351,0.00064124906],"genre_scores_gemma":[0.99817497,0.0010112874,0.000011850562,0.000019861785,0.000012999458,4.0133983e-7,0.0000065419945,0.0000043030445,0.00075777655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902666,0.00025336407,0.0001362309,0.00027419731,0.000035917357,0.00027360787],"domain_scores_gemma":[0.9995425,0.00008655286,0.000048878665,0.00016484702,0.000114145645,0.00004307726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029957926,0.000098157674,0.00017007555,0.00036231865,0.00018278592,0.000009763092,0.0001253382,0.00015816247,0.00022916833],"category_scores_gemma":[0.00007687928,0.00009642905,0.000029490373,0.0002560609,0.00027638886,0.0001803507,0.00012799144,0.00029004258,0.000007772213],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006605667,0.0002774043,0.9397535,0.000067132074,0.00007301798,0.0000182802,0.00037236343,6.693075e-7,0.04698202,0.0018439108,0.0011622744,0.008788902],"study_design_scores_gemma":[0.0010921401,0.00059582683,0.98876387,0.00007481333,0.000012143506,0.000014043073,0.0002884332,3.7481408e-7,0.0056836,0.000030887502,0.0033427011,0.00010118634],"about_ca_topic_score_codex":0.0017366108,"about_ca_topic_score_gemma":0.00005540333,"teacher_disagreement_score":0.049010392,"about_ca_system_score_codex":0.000020182102,"about_ca_system_score_gemma":0.00006271872,"threshold_uncertainty_score":0.39322627},"labels":[],"label_agreement":null},{"id":"W7024458738","doi":"","title":"Should acellular pertussis vaccine be recommended to healthcare professionals?","year":2013,"lang":"en","type":"article","venue":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Health care; Epidemiology; Public health; Vaccination; Whooping cough; Christian ministry; Pertussis vaccine; Disease","score_opus":0.03120359037385237,"score_gpt":0.2758158602577537,"score_spread":0.2446122698839013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7024458738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60563135,0.0009532161,0.0006563728,0.37330908,0.0043269503,0.0017009937,0.0001168252,0.0006923998,0.012612803],"genre_scores_gemma":[0.9932243,0.00007984847,0.00095259433,0.0019512898,0.0003914151,0.0007337213,0.00046009317,0.00005636653,0.0021503312],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99693984,0.000588749,0.0007440424,0.0007459556,0.00012444874,0.00085699366],"domain_scores_gemma":[0.99796975,0.00022187317,0.00026005073,0.00064617954,0.0005868293,0.0003153378],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004403431,0.00046703717,0.00056130637,0.00044801846,0.0010063923,0.00014420178,0.00050951255,0.00078089134,0.0013715978],"category_scores_gemma":[0.00037727915,0.00039385186,0.00022109701,0.00060960517,0.0000094584475,0.0004402437,0.00032203048,0.0007625628,0.0003014166],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052431226,0.0017001035,0.0022297662,0.00014897334,0.0005221165,0.000022696862,0.002326715,0.0000120805325,0.4148217,0.47289056,0.096031,0.008769954],"study_design_scores_gemma":[0.0012666069,0.00017212202,0.010014906,0.00010740689,0.00004657625,0.0005965634,0.00054874644,0.000014759179,0.012807334,0.00019582875,0.97376204,0.00046712745],"about_ca_topic_score_codex":0.000024414958,"about_ca_topic_score_gemma":0.00026050798,"teacher_disagreement_score":0.877731,"about_ca_system_score_codex":0.00037032823,"about_ca_system_score_gemma":0.00031526838,"threshold_uncertainty_score":0.99985135},"labels":[],"label_agreement":null},{"id":"W7024723753","doi":"","title":"Skin for Skin: Death and Life for Inuit and Innu. By Gerald M. Sider.","year":2015,"lang":"en","type":"article","venue":"eScholarship (California Digital Library)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Disease; MEDLINE; Exposition (narrative); Epidemiology","score_opus":0.021120756200235635,"score_gpt":0.2331150129089224,"score_spread":0.21199425670868677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7024723753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98715353,0.0022799675,0.00028468692,0.0011558363,0.00031859765,0.0006607976,0.0074223666,0.00015621637,0.00056801457],"genre_scores_gemma":[0.99431634,0.000042164098,0.00038098518,0.0007460735,0.00015412543,0.00012636042,0.0015915214,0.00005807415,0.0025843668],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988509,0.000048183178,0.00032356524,0.00038154155,0.000019684197,0.0003761337],"domain_scores_gemma":[0.99925953,0.00024514424,0.00009916096,0.00017615066,0.000060229944,0.00015975938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015205401,0.0002553169,0.00032178877,0.00009342566,0.00019453629,0.0005525587,0.00013375765,0.00029993043,0.000111337584],"category_scores_gemma":[0.00036299668,0.00021991458,0.000089950314,0.000097571916,0.00008703237,0.0016066775,0.00015172557,0.00018846164,0.000113434304],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00427699,0.0010041641,0.23122695,0.00044643818,0.0009812062,0.0000030715205,0.00059884845,0.0000012910824,0.04323983,0.015295394,0.6382682,0.06465766],"study_design_scores_gemma":[0.0029836018,0.00047424185,0.0035920925,0.000026213218,0.000039371982,0.000037799164,0.00006290004,0.000005814256,0.012630564,0.008694016,0.97108406,0.00036932988],"about_ca_topic_score_codex":0.00001353154,"about_ca_topic_score_gemma":0.000005582071,"teacher_disagreement_score":0.33281592,"about_ca_system_score_codex":0.000014724682,"about_ca_system_score_gemma":0.00009295275,"threshold_uncertainty_score":0.8967856},"labels":[],"label_agreement":null},{"id":"W7030597663","doi":"","title":"A new structural type for Haemophilus influenzae lipopolysaccharide: structural analysis of lipopolysaccharide from non-typeable H. influenzae strain 486","year":2001,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Strain (injury); Haemophilus influenzae; Lipopolysaccharide; Pasteurellaceae; Bacteria","score_opus":0.02003352307144188,"score_gpt":0.2802107593399757,"score_spread":0.2601772362685338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7030597663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960227,0.00028751176,0.00037368832,0.00018650577,0.001690153,0.00038424184,0.00075011054,0.00009572331,0.00020938499],"genre_scores_gemma":[0.9962826,0.000032186,0.0015343294,0.0001613154,0.00031189987,0.000016548955,0.00066800276,0.000035944824,0.00095718564],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998106,0.00007451045,0.0007079563,0.0005080447,0.00004997714,0.0005535371],"domain_scores_gemma":[0.9985096,0.0001892862,0.00034901965,0.0005888305,0.00027569395,0.00008761249],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001209348,0.0003664269,0.0008510047,0.00045593994,0.0002645866,0.000056548994,0.00040555213,0.00037436158,0.007746413],"category_scores_gemma":[0.00014693664,0.00032198205,0.00036892932,0.00070370466,0.00010263256,0.00029752342,0.000118981596,0.0002892565,0.00006940509],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006969738,0.000023447848,0.037710365,0.000011900295,0.0025094503,0.0000014396142,0.000344589,0.00024102253,0.94296026,0.0010643137,0.0016039012,0.012832357],"study_design_scores_gemma":[0.009563591,0.0013937666,0.5417005,0.00009377729,0.0071289726,0.00009890532,0.0004937408,0.0027573812,0.3878591,0.02029568,0.026612403,0.0020021973],"about_ca_topic_score_codex":0.005889544,"about_ca_topic_score_gemma":0.0022482697,"teacher_disagreement_score":0.55510116,"about_ca_system_score_codex":0.00005928895,"about_ca_system_score_gemma":0.00016517818,"threshold_uncertainty_score":0.9999232},"labels":[],"label_agreement":null},{"id":"W7033407253","doi":"","title":"Rainbow Writes: Peer-Led Creative Writing Groups’ Potential for Promoting 2SLGBTQ+ Youth Wellbeing","year":2021,"lang":"en","type":"article","venue":"Scholars Commons (Wilfrid Laurier University)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Mainstream; Psychological intervention; Creative writing; Thematic analysis; Mental health; Identity (music); Social media; Qualitative research; Youth studies","score_opus":0.013274389433119156,"score_gpt":0.224382601955919,"score_spread":0.21110821252279985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7033407253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897516,0.00034445047,0.0017085886,0.0011528004,0.0011622512,0.0004155801,0.00038948384,0.00022375639,0.004851484],"genre_scores_gemma":[0.984839,0.000028822888,0.0008433665,0.000064970605,0.00015782117,0.000004778219,0.0008580568,0.000039593313,0.013163598],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99798214,0.0004888854,0.0003230994,0.0005663134,0.0000473025,0.000592275],"domain_scores_gemma":[0.99842894,0.00020264722,0.00019290143,0.00041026634,0.00068906846,0.00007616864],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0005017864,0.00030266156,0.00043313325,0.00034783955,0.0016284619,0.00017838586,0.0003404881,0.0003439701,0.00042879517],"category_scores_gemma":[0.00037508397,0.00034558616,0.00031369884,0.0006512964,0.00014151377,0.0006878021,0.00034150804,0.0006659383,0.000051161915],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009916902,0.0010856708,0.025028892,0.0001594963,0.0018995913,0.00020688948,0.0065415576,0.000058453563,0.9266812,0.026408404,0.0027974076,0.008140744],"study_design_scores_gemma":[0.020626146,0.00093116635,0.017935691,0.00079244113,0.0020418228,0.0005333464,0.06340847,0.00015610048,0.24397697,0.0017125243,0.6453433,0.002542026],"about_ca_topic_score_codex":0.0001031782,"about_ca_topic_score_gemma":0.0001711201,"teacher_disagreement_score":0.68270427,"about_ca_system_score_codex":0.00012110845,"about_ca_system_score_gemma":0.00017263897,"threshold_uncertainty_score":0.9998996},"labels":[],"label_agreement":null},{"id":"W7036642689","doi":"","title":"Changes in quarter yield and milking frequency during clinical mastitis","year":2007,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Milking; Yield (engineering); Mastitis; Quarter (Canadian coin)","score_opus":0.028020893421148777,"score_gpt":0.2885713624373583,"score_spread":0.26055046901620954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7036642689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99585205,0.0002899017,0.000074739066,0.0003460434,0.00086640863,0.000058223224,0.0000016006707,0.00003389796,0.0024771339],"genre_scores_gemma":[0.9989708,0.00012093222,0.000065938286,0.00008091667,0.00009722632,0.0000027267909,0.0000032764551,0.0000041200565,0.00065406016],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99946296,0.000023336317,0.00019185815,0.00013794484,0.0000035432479,0.00018033887],"domain_scores_gemma":[0.999765,0.000109246525,0.000027418288,0.000074386255,0.000012340628,0.000011626191],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024839604,0.00006367337,0.00012303692,0.00008413753,0.000060100094,0.000007921861,0.00003085557,0.00016244451,0.0010649413],"category_scores_gemma":[0.000037017817,0.00005307033,0.000020426254,0.000055090713,0.000036571426,0.00004622706,0.000025126634,0.00014208844,0.000056274883],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027926875,0.000037172405,0.49904045,0.000005865784,0.000016089298,0.0000037019997,0.00007098645,1.7062662e-8,0.49547294,0.00044105065,0.00018209967,0.0047017047],"study_design_scores_gemma":[0.00059417903,0.000107181484,0.9605904,0.000026694042,0.000005304328,0.00007370163,0.00014776384,1.3761725e-7,0.036237027,0.000083513,0.0020449648,0.00008910714],"about_ca_topic_score_codex":0.00052351115,"about_ca_topic_score_gemma":0.010709253,"teacher_disagreement_score":0.46154997,"about_ca_system_score_codex":0.000006512952,"about_ca_system_score_gemma":0.000004163134,"threshold_uncertainty_score":0.99984825},"labels":[],"label_agreement":null},{"id":"W7043023231","doi":"","title":"Rapid diagnosis of meningococcal disease","year":2010,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Meningococcal disease; Disease; Meningococcal meningitis; MEDLINE; Neisseria meningitidis","score_opus":0.019102737883454794,"score_gpt":0.27395496141433734,"score_spread":0.25485222353088255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7043023231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934318,0.00003470997,0.0000068039567,0.0011012268,0.00042936648,0.00024064828,0.00013723112,0.000057005185,0.0045611765],"genre_scores_gemma":[0.9929209,0.00022853572,0.000030617164,0.000005898472,0.000065128406,0.0000043764085,0.00010176307,0.000011440427,0.006631385],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987969,0.00025720568,0.0001584534,0.00028773557,0.000058351507,0.00044135697],"domain_scores_gemma":[0.99889827,0.00022321254,0.0000687836,0.00036543727,0.00032054223,0.00012374808],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00040595158,0.00012543245,0.00021126762,0.00036982988,0.00042287234,0.000014529479,0.0003136036,0.00020411474,0.008426575],"category_scores_gemma":[0.00019765731,0.00012379725,0.00013505426,0.00040344434,0.00045144168,0.00020067909,0.0002807854,0.0007155155,0.00022063013],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015331417,0.0019346987,0.3862763,0.00012760902,0.0006188935,0.00020541258,0.00040477028,0.0000028609786,0.4453705,0.06982051,0.08300275,0.010702533],"study_design_scores_gemma":[0.0015745105,0.00036971332,0.2343061,0.00003680354,0.00005897237,0.0000109523135,0.0005605259,0.000001299912,0.045856975,0.00015810972,0.71681297,0.00025303863],"about_ca_topic_score_codex":0.0015885585,"about_ca_topic_score_gemma":0.00007422458,"teacher_disagreement_score":0.6338102,"about_ca_system_score_codex":0.00002227068,"about_ca_system_score_gemma":0.00018468173,"threshold_uncertainty_score":0.99247986},"labels":[],"label_agreement":null},{"id":"W7043197970","doi":"","title":"Structural analysis of the lipooligosaccharide from the commensal Haemophilus influenzae m genome strain 129Pt.: Carbohyd.Res.","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Strain (injury); Haemophilus influenzae; Genome; Bacteria; Whole genome sequencing","score_opus":0.016630154575153235,"score_gpt":0.2404206098306435,"score_spread":0.22379045525549027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7043197970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99583054,0.000264728,0.000013697801,0.0018183892,0.00072469143,0.00015571255,0.0008973178,0.000027228822,0.00026769444],"genre_scores_gemma":[0.99922603,0.000015013243,0.00002761426,0.00040659247,0.00009236143,0.0000088173,0.00015738315,0.0000091332695,0.000057064095],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991192,0.00014488553,0.000298174,0.00018780648,0.00002576002,0.00022416857],"domain_scores_gemma":[0.9991236,0.00012223875,0.0001508526,0.00052515994,0.00006291888,0.0000152441025],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000118258264,0.00014805704,0.00030228577,0.00007594383,0.00030351273,0.000021918819,0.00039669542,0.00015249362,0.0013850867],"category_scores_gemma":[0.000047447254,0.00008177795,0.00023501717,0.00046516766,0.00019502408,0.000052951287,0.00014335818,0.00026321827,0.00002601908],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003403208,0.00002494169,0.011317757,0.000001537091,0.0014373404,3.6019497e-7,0.00074441277,0.00039724485,0.9835392,0.001823329,0.00014679023,0.0005330271],"study_design_scores_gemma":[0.0010598347,0.00005384834,0.9502683,0.00001102987,0.001050146,0.000008554534,0.00020828671,0.000015737973,0.03820432,0.004891232,0.0040590474,0.00016961944],"about_ca_topic_score_codex":0.0036838404,"about_ca_topic_score_gemma":0.0014862351,"teacher_disagreement_score":0.9453349,"about_ca_system_score_codex":0.00003952809,"about_ca_system_score_gemma":0.000055979406,"threshold_uncertainty_score":0.9995278},"labels":[],"label_agreement":null},{"id":"W7043619654","doi":"","title":"Structure of the Bordetella trematum LPS O-chain subuit","year":2005,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bordetella pertussis; Bacteria; Bordetella; Antibiotics","score_opus":0.0066021289807427245,"score_gpt":0.21710968202870776,"score_spread":0.21050755304796503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7043619654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919084,0.00015275512,0.0000065211966,0.00082358555,0.00079645996,0.00008216617,0.00003136353,0.000021169413,0.0061775823],"genre_scores_gemma":[0.9960309,0.000012563489,0.00006189157,0.000065084976,0.00008759208,0.0000014318773,0.000007344601,0.0000061691576,0.0037270123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995802,0.000059590075,0.00013546999,0.000091137765,0.000007985381,0.00012564166],"domain_scores_gemma":[0.9996666,0.00002120074,0.00006123571,0.00021378645,0.00003100794,0.0000061727533],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00003998244,0.00007238662,0.00011776677,0.00002600527,0.000091915506,0.000004675066,0.00012335999,0.00012438685,0.0047520665],"category_scores_gemma":[0.000021441734,0.000044453758,0.000062799576,0.00008087945,0.000058191843,0.000027641088,0.00004334839,0.00012211692,0.00005831467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013957743,0.000025716468,0.0007256689,0.000004335313,0.000027031243,2.9168671e-8,0.00008846893,0.000002654867,0.98382306,0.0033837166,0.006467518,0.005437817],"study_design_scores_gemma":[0.00038187372,0.000034174285,0.012751575,0.000009699086,0.000018219038,0.000028770173,0.000023853529,0.0000024781348,0.8078634,0.0011871251,0.17763221,0.0000665952],"about_ca_topic_score_codex":0.000023654407,"about_ca_topic_score_gemma":0.00013355675,"teacher_disagreement_score":0.17595966,"about_ca_system_score_codex":0.000009167682,"about_ca_system_score_gemma":0.000017049844,"threshold_uncertainty_score":0.9961577},"labels":[],"label_agreement":null},{"id":"W7045929743","doi":"","title":"Characterization of the a -1,2-N-acetyl-glucosaminyltransferase of Neisseria gonorrhoeae , a key control point in lipopolysaccharide biosynthesis.","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Neisseria gonorrhoeae; Key (lock); Lipopolysaccharide; Bacteria; Neisseriaceae","score_opus":0.006332553679099372,"score_gpt":0.20111022490670344,"score_spread":0.19477767122760406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7045929743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975433,0.00005257336,0.0003184528,0.0010639502,0.00047928104,0.0002799389,0.00009413721,0.000017851444,0.00015055596],"genre_scores_gemma":[0.9997424,0.000048478705,0.0000365162,0.00006378546,0.000021240952,0.00002267025,0.000017770633,0.000011075366,0.000036068155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917793,0.00011034444,0.00038484897,0.00014714854,0.000008071555,0.00017165078],"domain_scores_gemma":[0.99949646,0.000045224995,0.0001420835,0.00024818708,0.00005690195,0.000011145145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014550518,0.000121117155,0.00029600202,0.00009295966,0.000051686722,0.0000053681433,0.00014889744,0.00014379412,0.0006271383],"category_scores_gemma":[0.000045324377,0.00008822606,0.000108020795,0.00015902946,0.00008996499,0.00008795066,0.000022412287,0.00012152943,0.000018165638],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020196263,0.00021119024,0.002383539,0.000020166142,0.000049973794,7.199411e-8,0.00028987988,0.000009118487,0.99382126,0.0023764619,0.0000043860873,0.0006319943],"study_design_scores_gemma":[0.0018422423,0.00011898186,0.037980635,0.00007375059,0.00003971871,0.000013219832,0.00004273297,0.0000022000534,0.9590235,0.00028984973,0.0004889119,0.00008428374],"about_ca_topic_score_codex":0.00034154026,"about_ca_topic_score_gemma":0.00019653451,"teacher_disagreement_score":0.035597097,"about_ca_system_score_codex":0.00002699259,"about_ca_system_score_gemma":0.00006752602,"threshold_uncertainty_score":0.6866725},"labels":[],"label_agreement":null},{"id":"W7067314301","doi":"","title":"Les effets de richesse boursière et immobilière au Canada","year":2014,"lang":"fr","type":"other","venue":"uO Research (University of Ottawa)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Work (physics); Government (linguistics); Perspective (graphical); Context (archaeology)","score_opus":0.021260648632767307,"score_gpt":0.2803680544263295,"score_spread":0.2591074057935622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7067314301","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5792232,0.00061729754,0.00021518204,0.004467742,0.0013291849,0.0004965876,0.00037475355,0.00003946649,0.41323656],"genre_scores_gemma":[0.46788475,0.00035533178,0.00010815233,0.00002020465,0.00018398161,0.0000011672943,0.00014302139,0.000058537807,0.5312449],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965055,0.0017989194,0.0001789852,0.00047687927,0.000095067284,0.00094467413],"domain_scores_gemma":[0.9980147,0.00072180305,0.00019638344,0.00053627056,0.00038365915,0.00014718837],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012359305,0.00028902479,0.00060745905,0.0004800006,0.0008138604,0.000018463976,0.00076151127,0.00096504675,0.036521934],"category_scores_gemma":[0.00024362186,0.00033784178,0.0001776604,0.00036212208,0.0008131254,0.00008315563,0.0003766451,0.0012556452,0.0005642761],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012329996,0.0008818569,0.2078999,0.0014569339,0.0017259772,0.00011730907,0.0013022005,0.000026884174,0.09483758,0.102338545,0.5620156,0.027273938],"study_design_scores_gemma":[0.0010979164,0.00029639676,0.15496477,0.00025424777,0.000069982896,0.000036031255,0.00089112506,0.0000069512994,0.00097588665,0.000040983567,0.8411156,0.00025011337],"about_ca_topic_score_codex":0.9018827,"about_ca_topic_score_gemma":0.98366416,"teacher_disagreement_score":0.2791,"about_ca_system_score_codex":0.000933328,"about_ca_system_score_gemma":0.002724101,"threshold_uncertainty_score":0.9999074},"labels":[],"label_agreement":null},{"id":"W7071403419","doi":"","title":"The role of lex2b in LPS biosynthesis in Haemophilus influenzae .","year":2003,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biosynthesis; Haemophilus influenzae; Lipopolysaccharide; Bacteria; Antibiotics","score_opus":0.009911200956268596,"score_gpt":0.22755187013585354,"score_spread":0.21764066917958494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7071403419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98440754,0.0007416132,7.19708e-7,0.00014224672,0.00023789522,0.000079724065,0.0000039778492,0.0000087826575,0.014377519],"genre_scores_gemma":[0.99964863,0.00009226246,0.000022636477,0.000017526547,0.000007799449,0.000012895982,0.00000143834,0.0000047987237,0.00019198805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939954,0.00014646634,0.00019635577,0.00009125739,0.000006040572,0.00016034784],"domain_scores_gemma":[0.99962944,0.00014987461,0.00004397879,0.00015284537,0.00001868842,0.0000051645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021916337,0.00006334615,0.00012938747,0.00007930695,0.000056308178,0.000005285131,0.00008181066,0.00010682335,0.00044605063],"category_scores_gemma":[0.00015505763,0.00004456245,0.0000313417,0.00015869808,0.000059655307,0.000034054105,0.000018386037,0.000107436776,0.00006292902],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042159212,0.00006749874,0.037568852,0.0000020895798,0.000014138113,2.5848612e-7,0.000105189516,0.0000019062986,0.9393467,0.012165152,0.00012806032,0.010558012],"study_design_scores_gemma":[0.0006864116,0.000052555853,0.06467506,0.000021344504,0.0000059942754,0.0000145734275,0.00025881804,0.0000016632824,0.7112269,0.011485665,0.2114802,0.00009080986],"about_ca_topic_score_codex":0.00020738582,"about_ca_topic_score_gemma":0.0005332387,"teacher_disagreement_score":0.22811978,"about_ca_system_score_codex":0.000016019478,"about_ca_system_score_gemma":0.000025622254,"threshold_uncertainty_score":0.48839417},"labels":[],"label_agreement":null},{"id":"W7083442556","doi":"10.1016/j.eurpolymj.2025.114321","title":"Integrating advanced engineering strategies and multifunctional applications of sustainable lignin-based polyurethanes: A comprehensive review","year":2025,"lang":"en","type":"article","venue":"European Polymer Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Beijing Nova Program; Beijing Institute of Petrochemical Technology","keywords":"Compatibility (geochemistry); Scalability; Sustainability; Rational design; Sustainable production; Circular economy; Dependency (UML); Sustainable design","score_opus":0.006928960076928149,"score_gpt":0.2422213975529229,"score_spread":0.23529243747599476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7083442556","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46378773,0.4959365,0.029269874,0.0013760781,0.001332925,0.0008768226,0.000030673877,0.0001636177,0.007225745],"genre_scores_gemma":[0.9973193,0.0010029793,0.00022732436,0.00018325068,0.000045339733,0.000012817191,0.000020209114,0.000012724695,0.0011760729],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992644,0.0001492531,0.00030691767,0.000112675465,0.000012368753,0.00015434882],"domain_scores_gemma":[0.9994405,0.000105948115,0.00014092932,0.00010228887,0.00019278956,0.00001752697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017017635,0.00011408852,0.00019285629,0.00015389148,0.00022115848,0.000037665326,0.00008320129,0.000032521475,0.000099949226],"category_scores_gemma":[0.000052613286,0.000095248644,0.000062961175,0.00019122782,0.00006275542,0.00012978703,0.000037490747,0.0002526977,0.0000064846845],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006442281,0.00012850984,0.00031205948,0.0007069466,0.0002610199,0.000005951615,0.00012783373,0.00009044063,0.9618915,0.01504421,0.0018684323,0.019498684],"study_design_scores_gemma":[0.007992159,0.0007871586,0.020611351,0.009427428,0.00069314975,0.0011278883,0.011039665,0.0000927471,0.27683035,0.00027239666,0.6701157,0.0010100115],"about_ca_topic_score_codex":0.000018294104,"about_ca_topic_score_gemma":0.0000010351156,"teacher_disagreement_score":0.68506116,"about_ca_system_score_codex":0.000014324369,"about_ca_system_score_gemma":0.00009737684,"threshold_uncertainty_score":0.3884127},"labels":[],"label_agreement":null},{"id":"W7083709817","doi":"10.22141/2224-0721.21.6.2025.1624","title":"Mental disorders in patients with osteoarthritis combined with diabetes mellitus in the practice of a family doctor","year":2025,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF ENDOCRINOLOGY (Ukraine)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Anxiety; Osteoarthritis; Diabetes mellitus; Psychosocial; Depression (economics); Comorbidity; Mental health","score_opus":0.0048514209743631,"score_gpt":0.24615812295570672,"score_spread":0.2413067019813436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7083709817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938521,0.0008449128,0.0000123025175,0.0029246924,0.0009794093,0.00020961885,0.00002232957,0.0000042472057,0.001150405],"genre_scores_gemma":[0.9993095,0.00026939868,0.00007229661,0.00023251314,0.000019577275,0.0000133718795,0.000027538455,0.0000054463208,0.000050403913],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897045,0.00023595148,0.0004371311,0.000112970156,0.00005380771,0.00018971307],"domain_scores_gemma":[0.998892,0.00038093003,0.00030279197,0.00010154938,0.0003151736,0.0000075310872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015533296,0.00011899146,0.0002550847,0.0003992679,0.00003367343,0.000013943606,0.0003209509,0.00006146492,0.000051770858],"category_scores_gemma":[0.00013670533,0.000074003714,0.000050205133,0.00019015196,0.00015985727,0.00020982506,0.000048026912,0.0003129708,0.0000033062965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007623926,0.0021138068,0.95275,0.000011986772,0.0010457495,0.000024584986,0.00096501876,0.00003543869,0.009859992,0.0048336177,0.0005356419,0.020200236],"study_design_scores_gemma":[0.018572873,0.0033475847,0.9165385,0.00022095724,0.000064954314,0.00008984312,0.0008034703,0.000001074163,0.0018351639,0.00016746015,0.058228165,0.00012999444],"about_ca_topic_score_codex":0.00016096933,"about_ca_topic_score_gemma":0.00042248203,"teacher_disagreement_score":0.05769252,"about_ca_system_score_codex":0.000047246845,"about_ca_system_score_gemma":0.00006425073,"threshold_uncertainty_score":0.3017784},"labels":[],"label_agreement":null},{"id":"W7084041553","doi":"10.64628/aam.a6p5nx6ud","title":"How birders helped pinpoint hotspots for migratory bird conservation","year":2019,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Carleton University","funders":"","keywords":"Wildlife conservation; Conservation science; Endangered species; Biodiversity; Biodiversity conservation","score_opus":0.015095851583002931,"score_gpt":0.2259129809674181,"score_spread":0.21081712938441516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084041553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930141,0.00017269248,0.00045222684,0.0034687892,0.0019263807,0.00043686366,0.000015365753,0.00023168827,0.00028192517],"genre_scores_gemma":[0.9813475,0.000019391757,0.00013309656,0.0005000238,0.00004383211,0.000047335292,0.000044302906,0.00001960306,0.017844927],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994888,0.000035064862,0.00011905485,0.0001745439,0.000005698509,0.0001768966],"domain_scores_gemma":[0.9995973,0.00007565735,0.000057552956,0.00016500702,0.000094098206,0.000010395246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008993313,0.000101948826,0.00015294559,0.00007901319,0.00009065724,0.000029559487,0.000059540052,0.00016050627,0.0005876516],"category_scores_gemma":[0.00003212285,0.000081933,0.00007860456,0.000079306825,0.000028164131,0.00012572618,0.000017037584,0.00006245751,0.00059395324],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009291478,0.0000419022,0.021821877,0.000018349734,0.000065808184,3.6083687e-8,0.00004114676,3.3690537e-7,0.94967735,0.0026018906,0.02438055,0.0012578588],"study_design_scores_gemma":[0.002772811,0.00041723705,0.07434674,0.000017345003,0.00003273703,0.00001664521,0.0004221868,0.000017372187,0.21274377,0.00031206568,0.7086263,0.00027479994],"about_ca_topic_score_codex":0.00042404642,"about_ca_topic_score_gemma":0.00041956815,"teacher_disagreement_score":0.7369335,"about_ca_system_score_codex":0.000017281925,"about_ca_system_score_gemma":0.00003221458,"threshold_uncertainty_score":0.7634265},"labels":[],"label_agreement":null},{"id":"W7084132166","doi":"10.64628/aam.tdme5tcj3","title":"How our unconscious memory keeps us functioning efficiently in our daily lives","year":2025,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Unconscious mind; Feeling; Subconscious; Perspective (graphical)","score_opus":0.00994599263012147,"score_gpt":0.2417492130318746,"score_spread":0.23180322040175314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084132166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98441976,0.00083856395,0.00035702248,0.0025004696,0.004668954,0.00016361663,0.000004976075,0.00013180931,0.0069148173],"genre_scores_gemma":[0.9403352,0.000025488007,0.00003924135,0.00020510369,0.000055339897,0.00002040089,0.000020788186,0.000006840031,0.059291564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991842,0.00010834728,0.00018240944,0.00025464533,0.000008387495,0.00026200808],"domain_scores_gemma":[0.9996452,0.00003609285,0.00004729784,0.00020035448,0.00005957691,0.000011499629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001489017,0.00013901075,0.0002108876,0.00026703894,0.00020510238,0.00006649738,0.00010470774,0.00016637197,0.00010834496],"category_scores_gemma":[0.00008065031,0.00011662623,0.000069501875,0.00029815346,0.00001731484,0.00010553437,0.00007772553,0.00021948498,0.00020003896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019437609,0.0003174418,0.039802674,0.000029313724,0.00020303292,0.000004122273,0.00022600529,0.00010056309,0.9164165,0.00102949,0.031736273,0.009940196],"study_design_scores_gemma":[0.010532931,0.00077405595,0.32377565,0.00028901256,0.00021340628,0.00022238851,0.03950851,0.00005984535,0.4225637,0.00038047304,0.20051745,0.0011625899],"about_ca_topic_score_codex":0.0006534294,"about_ca_topic_score_gemma":0.0012971412,"teacher_disagreement_score":0.49385282,"about_ca_system_score_codex":0.000038946804,"about_ca_system_score_gemma":0.000061738494,"threshold_uncertainty_score":0.47558796},"labels":[],"label_agreement":null},{"id":"W7084305064","doi":"","title":"Chapitre 1. Rawls et le libéralisme politique","year":2025,"lang":"fr","type":"book-chapter","venue":"Industrias Culturais (Universidade de Coimbra)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Counterexample; Context (archaeology); Term (time)","score_opus":0.029348724450713747,"score_gpt":0.2496053808740296,"score_spread":0.22025665642331585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084305064","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024280299,0.002085931,0.00013961972,0.129986,0.005155489,0.001112281,0.0026064226,0.00045383707,0.8341801],"genre_scores_gemma":[0.13973032,0.0018850011,0.00010410734,0.0010763771,0.00061556883,0.00001931219,0.0020113,0.00008764575,0.8544704],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99675107,0.0005266289,0.0006461553,0.000981203,0.00006015672,0.0010347759],"domain_scores_gemma":[0.99759734,0.00048022266,0.000565542,0.00072319433,0.00043333546,0.00020036478],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.00033811168,0.0009915289,0.0011651802,0.0006759881,0.0009207541,0.00017928757,0.0007554422,0.0048912345,0.012658166],"category_scores_gemma":[0.00023837016,0.0010734713,0.0007147198,0.00031823548,0.0006719051,0.00061352336,0.0005025198,0.0028207784,0.001088192],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018720236,0.0001508911,0.00009143945,0.000058133213,0.0011765948,0.00006882239,0.00038072348,0.000010243676,0.034049504,0.89547426,0.06421348,0.004138709],"study_design_scores_gemma":[0.003645075,0.00030984727,0.009200335,0.0011803968,0.0005697537,0.0005815249,0.000992009,0.0000045719876,0.00558373,0.0020423683,0.974742,0.00114838],"about_ca_topic_score_codex":0.01063787,"about_ca_topic_score_gemma":0.0011579386,"teacher_disagreement_score":0.91052854,"about_ca_system_score_codex":0.00041069204,"about_ca_system_score_gemma":0.0011547903,"threshold_uncertainty_score":0.9996896},"labels":[],"label_agreement":null},{"id":"W7084579257","doi":"10.6084/m9.figshare.30276859.v1","title":"Additional file 1 of Comprehensive comparison of enzymatic and bisulfite DNA methylation analysis in clinically relevant samples","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AstraZeneca (Canada); Newborn Screening Ontario","funders":"","keywords":"Enzyme; DNA methylation; DNA; Bisulfite; Methylation","score_opus":0.049090382145256996,"score_gpt":0.32424239436914076,"score_spread":0.27515201222388375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084579257","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04075851,0.0002450375,0.000002363451,0.000015368434,0.00002405281,0.00008266124,0.958675,0.000008384762,0.00018857211],"genre_scores_gemma":[0.28729364,0.0000035022908,0.00016582024,0.000011501148,0.0000045300944,0.00006838392,0.71233183,0.0000020106884,0.00011878861],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9992871,0.00009766902,0.00042383108,0.00011436902,0.000009898025,0.000067079585],"domain_scores_gemma":[0.99626017,0.0032669997,0.00022148404,0.00010277245,0.00014311234,0.000005494637],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000023544564,0.00006373213,0.00033863995,0.0002455687,0.000030846935,0.0000039138777,0.0000497197,0.0001145553,0.9045609],"category_scores_gemma":[0.0013023005,0.000057716803,0.000076496566,0.0003976552,0.00001733116,0.000034299195,0.000049349837,0.00008348705,0.00007309699],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003861419,0.00008813673,0.000862138,0.000091550835,0.00031725582,6.0088475e-8,0.00004810427,0.000019342171,0.009243913,0.000020274385,0.9873655,0.0019051431],"study_design_scores_gemma":[0.00042770582,0.00010143079,0.5655751,0.0012183366,0.00011403061,8.171237e-7,0.00016259063,0.00013530572,0.0048034824,0.000088959096,0.42728406,0.00008817666],"about_ca_topic_score_codex":0.000026004729,"about_ca_topic_score_gemma":0.00010918861,"teacher_disagreement_score":0.90448785,"about_ca_system_score_codex":0.0000067376777,"about_ca_system_score_gemma":0.000033942437,"threshold_uncertainty_score":0.23536229},"labels":[],"label_agreement":null},{"id":"W7088077501","doi":"10.5281/zenodo.17319927","title":"Murina baletei Eger, Sedlock, Lim & Heaney, 2025, sp. nov.","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum","funders":"","keywords":"Holotype; Honour; Archipelago; Sequence (biology); Type locality; Fauna; Peninsula","score_opus":0.024210486588232445,"score_gpt":0.2511259058619842,"score_spread":0.22691541927375175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7088077501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5921749,0.0011762732,0.0022179168,0.004506282,0.002930741,0.0009686431,0.00040994215,0.0023232538,0.39329207],"genre_scores_gemma":[0.97584265,0.00023586192,0.00003898892,0.00024967227,0.00012308331,9.538562e-8,0.0015670758,0.00047374782,0.021468814],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986652,0.0003139547,0.00025586603,0.00036778097,0.000030526277,0.00036665492],"domain_scores_gemma":[0.9990982,0.00003188326,0.00006802674,0.00043192212,0.00032839787,0.000041560215],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003396523,0.00015379579,0.00018338657,0.00026987446,0.0020301933,0.00027188926,0.00057095935,0.00014415513,0.038409065],"category_scores_gemma":[0.00026416444,0.00015508686,0.00007235293,0.00051079714,0.00013512532,0.00014589063,0.00082866824,0.00031782413,0.020008748],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001409468,0.00026037,0.0000288826,0.00005364334,0.00013544523,0.0000032792348,0.00020321843,0.0000064134765,0.27896196,0.00796676,0.64501244,0.067226656],"study_design_scores_gemma":[0.0007668856,0.00019737465,0.002432056,0.000034535744,0.00002353878,0.00008584121,0.000114990165,0.0000057171947,0.009320066,0.00012981302,0.9867426,0.00014654791],"about_ca_topic_score_codex":0.00006694005,"about_ca_topic_score_gemma":0.0000012317086,"teacher_disagreement_score":0.3836678,"about_ca_system_score_codex":0.00008495755,"about_ca_system_score_gemma":0.0000066687867,"threshold_uncertainty_score":0.999269},"labels":[],"label_agreement":null},{"id":"W7095206305","doi":"","title":"Epidemiology of Haemophilus","year":2013,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Serotype; Epidemiology; Incidence (geometry); Indigenous; Vaccination; Haemophilus; Conjugate vaccine","score_opus":0.031666584578066974,"score_gpt":0.27544053110802325,"score_spread":0.24377394652995626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7095206305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98988134,0.0005078817,0.00020410893,0.00059594365,0.00064289034,0.00008831018,0.0000021721505,0.000036682493,0.0080406545],"genre_scores_gemma":[0.9942771,0.00001598314,0.00019027415,0.000103089296,0.000019280506,0.000012174303,0.000010650914,0.0000028804207,0.0053685275],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99954623,0.00007500324,0.00018291656,0.00007628556,0.0000012811187,0.00011829502],"domain_scores_gemma":[0.9996401,0.0001387015,0.00004923227,0.000118388496,0.00004711363,0.0000064335964],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000087505745,0.00004705034,0.00016590276,0.00003596562,0.000029521358,3.696048e-7,0.00005179789,0.000102989055,0.014357621],"category_scores_gemma":[0.00008396543,0.000032590353,0.000042342017,0.000040718747,0.00005862426,0.000042263924,0.000025817006,0.00004994389,0.0020292022],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000112465805,0.000076067954,0.1739291,0.0000069224043,0.00008190001,3.476313e-8,0.000025729902,0.0000012544235,0.75659233,0.032280065,0.029397272,0.0075981026],"study_design_scores_gemma":[0.0006669505,0.00022208145,0.8231988,0.000007056371,0.000015713225,0.000063880885,0.000059020153,0.0000044830185,0.12482004,0.0076502264,0.043157697,0.00013403212],"about_ca_topic_score_codex":0.00127323,"about_ca_topic_score_gemma":0.000012096353,"teacher_disagreement_score":0.6492697,"about_ca_system_score_codex":0.0000027718004,"about_ca_system_score_gemma":0.0000059960385,"threshold_uncertainty_score":0.9987478},"labels":[],"label_agreement":null},{"id":"W7096220557","doi":"","title":"http://www.smartgrowth.org/ (accessed","year":2012,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunogenicity; Neisseria meningitidis; Antigen; Neisseria; Bacterial outer membrane; Meningococcal vaccine","score_opus":0.02254913994506914,"score_gpt":0.26197985903314763,"score_spread":0.2394307190880785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096220557","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9704771,0.0005262167,0.00013474854,0.00022706672,0.002843286,0.000072481365,0.0000029540713,0.0001406673,0.02557548],"genre_scores_gemma":[0.97976613,0.00002158963,0.000030592786,0.00013541686,0.00020331853,0.000012899009,0.000031888223,0.000008442034,0.019789726],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99943614,0.000044575674,0.00013197983,0.00009688519,0.0000050028266,0.0002854266],"domain_scores_gemma":[0.9997201,0.000037948717,0.000032994783,0.00015659913,0.000031056352,0.000021331009],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011020784,0.00009458498,0.00012096171,0.00004879507,0.00013074407,0.000011002865,0.00007950056,0.0001392489,0.00855463],"category_scores_gemma":[0.000023312517,0.00006873593,0.00005264305,0.00009013129,0.00003152037,0.00021459797,0.00004999741,0.00010609691,0.008645004],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025879226,0.00016312576,0.11473421,0.000004705269,0.00006929624,8.1326014e-8,0.00007747983,6.613916e-8,0.83859026,0.031359185,0.0134508265,0.0015249131],"study_design_scores_gemma":[0.00048524028,0.000043066477,0.17276147,0.0000026743542,0.000021764214,0.00003259617,0.000052960222,5.7546623e-7,0.14115414,0.000047152196,0.6852675,0.00013086841],"about_ca_topic_score_codex":0.00014650996,"about_ca_topic_score_gemma":0.000015461308,"teacher_disagreement_score":0.6974361,"about_ca_system_score_codex":0.000009874377,"about_ca_system_score_gemma":0.000009293695,"threshold_uncertainty_score":0.9923517},"labels":[],"label_agreement":null},{"id":"W7096421404","doi":"","title":"The epidemiology of invasive disease due to Haemophilus influenzae serotype a in the Canadian North from","year":2000,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Epidemiology; Haemophilus influenzae; Serotype; Disease; Pasteurellaceae; Transmission (telecommunications); Disease transmission; Epiglottitis","score_opus":0.0262303374298575,"score_gpt":0.2601852764834026,"score_spread":0.2339549390535451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096421404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916094,0.0005193853,0.0000012661686,0.00595155,0.00024083909,0.00027792,0.00010155234,0.0000097370375,0.0012883742],"genre_scores_gemma":[0.9963299,0.000058831993,0.0000102358235,0.0029001648,0.000040857478,0.000045581008,0.0000670539,0.0000047463886,0.00054261874],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99887514,0.00041794038,0.00027108652,0.00015340511,0.0000069430366,0.0002754751],"domain_scores_gemma":[0.9987377,0.00079880527,0.000040116454,0.00033488421,0.000040366176,0.000048109956],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002545019,0.0000971382,0.00019606558,0.000059229085,0.00027275278,0.0000065786917,0.00025805685,0.00010086839,0.0014052524],"category_scores_gemma":[0.00035978496,0.000051089606,0.00005040547,0.00018377432,0.00009645752,0.000034416338,0.000023223069,0.00015691327,0.0005066267],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047906832,0.000079400175,0.96852714,0.000004239694,0.00012564201,0.000010575773,0.0009766436,0.00016774576,0.0011490308,0.0037765217,0.014788081,0.009915912],"study_design_scores_gemma":[0.00023659397,0.000055721204,0.9253656,0.0000071575387,0.000012784049,0.0000081475255,0.000059364458,0.0000010947979,0.00012126836,0.0010031264,0.073064074,0.000065016524],"about_ca_topic_score_codex":0.5829636,"about_ca_topic_score_gemma":0.9647835,"teacher_disagreement_score":0.38181987,"about_ca_system_score_codex":0.000029264253,"about_ca_system_score_gemma":0.00019625392,"threshold_uncertainty_score":0.9995076},"labels":[],"label_agreement":null},{"id":"W7096593866","doi":"","title":"Case Definition","year":2011,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Purpura fulminans; Meningococcal disease; Meningitis; Pneumonia; Gram staining; Streptococcus pneumoniae; Sepsis","score_opus":0.07453994568026388,"score_gpt":0.23856373580154452,"score_spread":0.16402379012128065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096593866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88444,0.000032177108,0.00014558485,0.000009183143,0.00050294487,0.000024224875,0.0000023770228,0.000062066254,0.11478143],"genre_scores_gemma":[0.9982725,0.0000044506783,0.00020648097,0.0000318296,0.000010890719,0.000004498845,0.000008331145,0.0000022890829,0.0014587222],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998189,0.00001627212,0.000051609226,0.0000501126,7.732801e-7,0.000062309955],"domain_scores_gemma":[0.999903,0.0000070783476,0.000010470889,0.000061041166,0.000014653529,0.0000037540026],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000024675193,0.00003047054,0.000035934925,0.000021838518,0.000064255866,0.0000020163145,0.000014745152,0.000051742212,0.015200553],"category_scores_gemma":[0.0000046578093,0.000023130393,0.00001770078,0.000025783655,0.000013767611,0.00003625197,0.00000952646,0.00003168522,0.0018604692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008842369,0.00031426293,0.0059484243,0.000005286657,0.00010861491,0.00012397727,0.0006819468,1.6459703e-8,0.7790214,0.18606022,0.013273,0.014374448],"study_design_scores_gemma":[0.0020079254,0.00050867687,0.021564124,0.0000071294626,0.00007680937,0.06389091,0.00067502743,5.3713376e-7,0.77517396,0.008451954,0.1272382,0.0004047363],"about_ca_topic_score_codex":0.0004872805,"about_ca_topic_score_gemma":0.00007155106,"teacher_disagreement_score":0.17760827,"about_ca_system_score_codex":0.0000021415551,"about_ca_system_score_gemma":0.0000030004642,"threshold_uncertainty_score":0.9989167},"labels":[],"label_agreement":null},{"id":"W7096652625","doi":"","title":"Can J Infect Dis Med Microbiol Vol 26 No 4 July/August 2015 183","year":2016,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunization; Meningococcal disease; Meningococcal vaccine; Vaccination; Public health; Vaccination policy; Vaccination schedule; Bacterial meningitis","score_opus":0.009007512198973574,"score_gpt":0.23282999366677354,"score_spread":0.22382248146779996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096652625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9615739,0.00041986548,0.00020359043,0.0034773338,0.00827736,0.0004937376,0.00027836682,0.00068455527,0.02459127],"genre_scores_gemma":[0.864802,0.00009088048,0.00002688434,0.00019135357,0.00022937228,0.000024612646,0.000053209966,0.000029288261,0.13455242],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99893415,0.00011092482,0.0002648162,0.00029194218,0.000008409676,0.00038976394],"domain_scores_gemma":[0.9992513,0.0001100195,0.00007733946,0.00033981312,0.00018593407,0.000035560155],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012358875,0.00021073314,0.00026574626,0.000096574695,0.0001539935,0.000021626485,0.00015647076,0.0002756135,0.019594885],"category_scores_gemma":[0.00012762847,0.000121138684,0.00011610826,0.00010408766,0.000109005545,0.00011695578,0.00009846358,0.00012156101,0.016160093],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040166196,0.0000630687,0.002335929,0.000003894283,0.000090046786,3.362678e-7,0.000015059133,2.0552422e-8,0.67782325,0.00016353716,0.31750572,0.0019589534],"study_design_scores_gemma":[0.0013838181,0.00016808837,0.0065141516,0.000025996298,0.00003363353,0.000044560406,0.000010224172,6.87595e-8,0.21560593,0.000056525245,0.77591854,0.00023846216],"about_ca_topic_score_codex":0.0013623992,"about_ca_topic_score_gemma":0.00074242405,"teacher_disagreement_score":0.46221733,"about_ca_system_score_codex":0.000045759876,"about_ca_system_score_gemma":0.000053468782,"threshold_uncertainty_score":0.98460597},"labels":[],"label_agreement":null},{"id":"W7096994874","doi":"","title":"Background","year":2016,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Hib vaccine; Incidence (geometry); Conjugate vaccine; Vaccination; Disease; Meningitis; Public health","score_opus":0.022283053355893284,"score_gpt":0.25445246806661337,"score_spread":0.23216941471072008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096994874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9737276,0.000063903295,0.00069706433,0.0007291762,0.00088321726,0.00002343203,0.000002676845,0.00007265973,0.02380029],"genre_scores_gemma":[0.94240266,0.0000138207915,0.00001901924,0.000040101768,0.000027215494,0.000002690797,0.0000015336858,0.0000023155405,0.057490647],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998003,0.000013807056,0.00004810616,0.000058717367,0.0000011595814,0.0000778929],"domain_scores_gemma":[0.9998711,0.000027901497,0.000008613385,0.00007543826,0.000013221229,0.000003722939],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000025919846,0.00003093288,0.0000400852,0.000016095652,0.00003809833,0.000003145781,0.000029209192,0.000044773515,0.020265765],"category_scores_gemma":[0.0000053073736,0.000014630604,0.000018582663,0.00002078072,0.000020037081,0.000046370576,0.000014007543,0.000013799208,0.006529914],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006773499,0.000011895687,0.0013811332,2.5135625e-7,0.00001236751,3.476999e-8,0.0000021710905,1.359034e-9,0.956012,0.011798098,0.015720041,0.015055242],"study_design_scores_gemma":[0.00045232603,0.00003579485,0.015000211,0.000003044182,0.0000029841565,0.000022263888,0.000009886195,6.637933e-9,0.20039877,0.00030821905,0.78371954,0.000046947112],"about_ca_topic_score_codex":0.000030442437,"about_ca_topic_score_gemma":0.0000142188355,"teacher_disagreement_score":0.7679995,"about_ca_system_score_codex":0.000004819462,"about_ca_system_score_gemma":0.00000427572,"threshold_uncertainty_score":0.9942436},"labels":[],"label_agreement":null},{"id":"W7097417264","doi":"","title":"after Mass Immunization Campaign","year":2013,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Immunization; Incidence (geometry); Conjugate vaccine; Meningococcal vaccine; Serotype","score_opus":0.005498706791862877,"score_gpt":0.19912233285246472,"score_spread":0.19362362606060185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7097417264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893975,0.00017181777,0.0014311075,0.0002160215,0.000720982,0.000117389616,0.0000018171162,0.000087239714,0.007856129],"genre_scores_gemma":[0.98289156,0.00001364758,0.00012222913,0.0001019942,0.000025712523,0.00005048639,0.000028917042,0.000005323804,0.016760146],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99969953,0.000033640088,0.00008664925,0.0000721618,0.0000024577896,0.00010556551],"domain_scores_gemma":[0.9997966,0.000013443339,0.000016346035,0.00011737187,0.000050371462,0.00000586447],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00002613474,0.000053519543,0.000061054,0.00003289268,0.000056753077,0.000018369798,0.000039120092,0.00008527025,0.043917716],"category_scores_gemma":[0.000007446195,0.00003925105,0.000023405562,0.000055604396,0.000017315235,0.00011657492,0.000016243988,0.000049653685,0.007856321],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010377873,0.000027540227,0.011732591,0.0000019279664,0.000028684914,6.052774e-8,0.000048039972,5.448369e-7,0.97527754,0.0007835191,0.009604477,0.0024847016],"study_design_scores_gemma":[0.0011580169,0.00016125609,0.4492761,0.000012754006,0.000029319908,0.00004001255,0.00029621075,0.000010751064,0.27732095,0.0015489326,0.26978123,0.00036446462],"about_ca_topic_score_codex":0.00036363507,"about_ca_topic_score_gemma":0.000018301034,"teacher_disagreement_score":0.6979566,"about_ca_system_score_codex":0.0000063394405,"about_ca_system_score_gemma":0.0000053244794,"threshold_uncertainty_score":0.99291617},"labels":[],"label_agreement":null},{"id":"W7097689285","doi":"","title":"Outcomes of Invasive Meningococcal Disease in Adults and Children in Canada Between 2002 and 2011: A Prospective Cohort Study","year":2016,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Neisseria meningitidis; Prospective cohort study; Meningitis; Odds ratio; Univariate analysis; Risk factor; Cohort study; Disease","score_opus":0.005244755846748831,"score_gpt":0.21064981955727408,"score_spread":0.20540506371052525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7097689285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99882686,0.00011981,5.7820023e-7,0.00014778663,0.00005313452,0.0007191236,0.000070602764,0.000005609658,0.00005649361],"genre_scores_gemma":[0.9996243,0.000036024303,0.0000021180351,0.000008930131,0.0000061948244,0.000045923265,0.000005716588,0.000004190043,0.00026659074],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993894,0.00007079242,0.00019961613,0.00019954289,0.000009590035,0.00013107364],"domain_scores_gemma":[0.99968445,0.00012436509,0.00004622282,0.000092186834,0.00002468198,0.000028075638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007617411,0.00009489842,0.00026806124,0.000074968695,0.000025815907,0.000002478306,0.000038222308,0.00004009528,0.00032759734],"category_scores_gemma":[0.00006760808,0.000057872425,0.0000100902325,0.00004424569,0.000042819775,0.00006293849,0.000063982414,0.000057021196,0.0000039714187],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010492217,0.00008617475,0.9981435,0.0000033547205,0.00010305463,8.4120035e-7,0.00011777354,3.79775e-8,0.0009165174,0.00002130671,0.000094960786,0.00040754446],"study_design_scores_gemma":[0.002821383,0.00010920118,0.996189,0.000024314662,0.000021258722,0.0000014141604,0.00011092033,5.218268e-8,0.0006100548,0.000023539787,0.0000067283636,0.0000821167],"about_ca_topic_score_codex":0.83082527,"about_ca_topic_score_gemma":0.9299859,"teacher_disagreement_score":0.099160634,"about_ca_system_score_codex":0.000058834936,"about_ca_system_score_gemma":0.0001530469,"threshold_uncertainty_score":0.3586961},"labels":[],"label_agreement":null},{"id":"W7099332047","doi":"","title":"Commentary","year":2006,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pertussis vaccine; Whooping cough; Incidence (geometry); Population; Bordetella pertussis","score_opus":0.0076278307067900696,"score_gpt":0.22150188777178018,"score_spread":0.2138740570649901,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7099332047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9609883,0.00013937622,0.000086071384,0.0022641507,0.00066401507,0.00003006013,0.0000033186423,0.00007572894,0.035748985],"genre_scores_gemma":[0.9906687,0.0000020503019,0.00003316854,0.00049221073,0.00005221355,0.0000025047402,0.000059183923,0.000001973573,0.008687967],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983525,0.000011932656,0.000049285118,0.000040979954,9.722637e-7,0.00006157765],"domain_scores_gemma":[0.9999252,0.000009133819,0.000007452709,0.00005011421,0.000006625832,0.0000014961996],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000016866257,0.00002751022,0.00003533994,0.000014781879,0.00005324532,0.0000035477608,0.00002129228,0.000031293417,0.004532633],"category_scores_gemma":[6.2957923e-7,0.000020726853,0.000016063363,0.000022001466,0.000012407642,0.000022243077,0.000010878698,0.000026015066,0.0006992733],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000399865,0.00003834612,0.0067392127,3.6511847e-7,0.0000070108617,5.6793784e-8,0.000001607105,2.0876244e-7,0.47880834,0.004340162,0.50927037,0.0007903144],"study_design_scores_gemma":[0.00025650946,0.000018417235,0.027467357,6.174543e-7,0.0000034139914,0.000012023468,0.0000068512513,1.3221646e-7,0.098517045,0.00031062384,0.87337196,0.00003502418],"about_ca_topic_score_codex":0.0014784356,"about_ca_topic_score_gemma":0.00011703801,"teacher_disagreement_score":0.3802913,"about_ca_system_score_codex":0.00000344839,"about_ca_system_score_gemma":0.0000012589346,"threshold_uncertainty_score":0.99637735},"labels":[],"label_agreement":null},{"id":"W7100081828","doi":"","title":"© 2002 Canadian Medical Association or its licensors Epidemiology: Seventeen pertussis-re-","year":2015,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Association (psychology); MEDLINE; Disease; Epidemiology","score_opus":0.06366855340025544,"score_gpt":0.3083799355635042,"score_spread":0.24471138216324873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100081828","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44252136,0.003081577,0.00008025843,0.08319187,0.011900187,0.0006550487,0.00016174115,0.000493065,0.4579149],"genre_scores_gemma":[0.18653978,0.00021129832,0.00006312991,0.004945351,0.0004019537,0.000029792833,0.00001874884,0.000018678627,0.80777127],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985142,0.0004573032,0.00032389117,0.00020729164,0.000025177513,0.00047213954],"domain_scores_gemma":[0.9989394,0.00039774558,0.00009250156,0.00014526713,0.00019838627,0.00022668681],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013825713,0.00012847944,0.0002929064,0.00010961622,0.00014892359,0.000008510957,0.00014358934,0.00083356124,0.50246847],"category_scores_gemma":[0.005083665,0.0000871064,0.00006449878,0.00013583554,0.000026181118,0.00009003216,0.000036874542,0.00031552208,0.059198108],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004457391,0.00004284438,0.0057931435,0.0000023048349,0.00013130005,0.0000023830783,0.00010695589,0.0000011873661,0.0005411022,0.00050785893,0.99116015,0.0016661821],"study_design_scores_gemma":[0.0008054999,0.0001068667,0.013864846,0.000010850071,0.000021877448,0.000069206966,0.00018920994,0.000019253433,0.0004565186,0.0000033294477,0.98432314,0.00012936763],"about_ca_topic_score_codex":0.03131366,"about_ca_topic_score_gemma":0.22295256,"teacher_disagreement_score":0.44327036,"about_ca_system_score_codex":0.00023335128,"about_ca_system_score_gemma":0.00065975956,"threshold_uncertainty_score":0.9751369},"labels":[],"label_agreement":null},{"id":"W7100502704","doi":"","title":"y o A","year":2016,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Bacteremia; Haemophilus; Transmission (telecommunications); Epiglottitis","score_opus":0.0121813427757409,"score_gpt":0.23141093862888595,"score_spread":0.21922959585314505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100502704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97180676,0.000049046936,0.00070605805,0.0010094603,0.0006481203,0.000019989573,0.0000019310226,0.00007805036,0.025680589],"genre_scores_gemma":[0.9549051,0.0000072509038,0.000012220204,0.000028381613,0.0000142021545,0.0000022103907,5.864933e-7,0.0000012920432,0.045028772],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998718,0.000008158363,0.000030372279,0.00003766157,6.174112e-7,0.00005138294],"domain_scores_gemma":[0.9999189,0.000016046302,0.0000050716462,0.000049607268,0.000008235864,0.0000021790447],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000015834876,0.000018952165,0.000025618843,0.000011650403,0.000022709104,0.0000013017485,0.000018293744,0.000027519667,0.01349543],"category_scores_gemma":[0.000007910705,0.000008377687,0.000012364629,0.000014201454,0.000011513135,0.000024013556,0.000008400206,0.0000080616255,0.004446727],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004107893,0.000007134731,0.0016187085,1.1363496e-7,0.0000066973685,1.8084492e-8,0.000002019023,5.778942e-10,0.95567924,0.007755448,0.0117924465,0.023134049],"study_design_scores_gemma":[0.00029898807,0.000022091812,0.009686104,0.0000018330162,0.0000014724935,0.000013828072,0.0000024695705,3.465913e-9,0.2974276,0.0002487558,0.6922711,0.000025750884],"about_ca_topic_score_codex":0.000015991489,"about_ca_topic_score_gemma":0.0000062220824,"teacher_disagreement_score":0.68047863,"about_ca_system_score_codex":0.0000022486984,"about_ca_system_score_gemma":0.0000026164366,"threshold_uncertainty_score":0.9963284},"labels":[],"label_agreement":null},{"id":"W7100826956","doi":"","title":"Wild Turkey Meleagris gallopavo Last updated: 1999","year":2012,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meleagris gallopavo; Subspecies; Predation; Range (aeronautics); Period (music)","score_opus":0.011405717139567739,"score_gpt":0.23134929379434788,"score_spread":0.21994357665478015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100826956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.968901,0.00089829246,0.00009760473,0.00025170075,0.0030648466,0.00009471787,0.000012837357,0.00018835749,0.026490647],"genre_scores_gemma":[0.9797216,0.000051324107,0.0000651677,0.00016344921,0.0002158816,0.000009257027,0.00012473819,0.000011294848,0.019637307],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99929917,0.00006333652,0.00016056803,0.00012368566,0.000006667851,0.00034656492],"domain_scores_gemma":[0.9996896,0.000028140914,0.00003992645,0.00018081316,0.000033214023,0.000028299124],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011875155,0.000121218,0.00015424895,0.000058675392,0.00014287891,0.000020011004,0.00008883471,0.00018391147,0.00840155],"category_scores_gemma":[0.000014048131,0.000088669396,0.00006099781,0.00010259566,0.000036709192,0.00029318454,0.000058195666,0.00015130537,0.0041113957],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037770078,0.00022241188,0.04556027,0.000003835516,0.00014043356,1.6842608e-7,0.000099677665,5.429484e-7,0.75017685,0.007930671,0.19371052,0.002116871],"study_design_scores_gemma":[0.00040451204,0.000046016212,0.034855135,0.000003195098,0.000023360986,0.00006273789,0.000067801455,1.6140697e-7,0.10255018,0.000014419636,0.8618409,0.00013159474],"about_ca_topic_score_codex":0.0005313487,"about_ca_topic_score_gemma":0.00006532035,"teacher_disagreement_score":0.66813034,"about_ca_system_score_codex":0.000013481823,"about_ca_system_score_gemma":0.0000107103315,"threshold_uncertainty_score":0.99666405},"labels":[],"label_agreement":null},{"id":"W7100856420","doi":"","title":"Columbia&amp;apos;s Children&amp;apos;s Hospital, and Epidemiology Services, British","year":2016,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Antibody; Meningitis; Meningococcal disease; Epidemiology; Outbreak; Immunization; Incidence (geometry)","score_opus":0.05834722046707829,"score_gpt":0.31219917142116255,"score_spread":0.25385195095408425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100856420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928471,0.0024398435,0.0001813083,0.0015059047,0.0014251287,0.00028420455,0.00015113526,0.00022175584,0.0009436622],"genre_scores_gemma":[0.95876765,0.0018929603,0.00037662504,0.0006617184,0.00020113376,0.000041247684,0.0002505117,0.000031443422,0.037776735],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981942,0.00025823814,0.00046724582,0.00052957115,0.000010566926,0.0005401876],"domain_scores_gemma":[0.9989873,0.000310741,0.00015462146,0.00038917383,0.00009740083,0.000060733313],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00034295107,0.00020133705,0.0005029872,0.00006007066,0.0003328175,0.000054999615,0.0001722149,0.0004674322,0.008528414],"category_scores_gemma":[0.0001428541,0.0001792638,0.00010606777,0.00010251781,0.00023923906,0.00020502161,0.00018323414,0.00016720184,0.0016622328],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004147693,0.0002548011,0.7328957,0.000024844901,0.00035984945,8.0881824e-7,0.000084091764,7.359193e-8,0.11742176,0.0007081622,0.10529971,0.04290873],"study_design_scores_gemma":[0.0014555907,0.00017497384,0.52583826,0.00006384931,0.000043409393,0.0005649717,0.00001592944,6.00602e-8,0.00041343554,0.000849734,0.47025985,0.00031995153],"about_ca_topic_score_codex":0.028137865,"about_ca_topic_score_gemma":0.048937194,"teacher_disagreement_score":0.36496013,"about_ca_system_score_codex":0.000023637069,"about_ca_system_score_gemma":0.000023699764,"threshold_uncertainty_score":0.9991151},"labels":[],"label_agreement":null},{"id":"W7101127045","doi":"","title":"Monthly Report Rapport mensuel A NEW TWIST ON AN OLD PROBLEM: A CASE OF PEDIATRIC MENINGITIS CAUSED BY MULTIDRUG-RESISTANT STREPTOCOCCUS","year":2015,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningitis; Streptococcus pneumoniae; Serotype; Streptococcaceae; Twist; Streptococcus suis","score_opus":0.03263899332327802,"score_gpt":0.27489544893822254,"score_spread":0.24225645561494452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7101127045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953096,0.0002125645,0.000028061982,0.000119236734,0.0004999318,0.0005534658,0.00015075419,0.00013746455,0.002988912],"genre_scores_gemma":[0.9827953,0.000010601174,0.00021285015,0.000029978399,0.00011121709,0.000056866404,0.00036023522,0.000026800615,0.016396139],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848086,0.0001214477,0.00063752633,0.00041728083,0.000027857423,0.000315009],"domain_scores_gemma":[0.99886346,0.000047320103,0.00025241193,0.00048698476,0.00022783452,0.0001219999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035144627,0.00024143749,0.0003937743,0.00015122953,0.00010848448,0.000022781023,0.00010542733,0.00023546554,0.00047149844],"category_scores_gemma":[0.00008767646,0.00019611683,0.00009064879,0.00019483884,0.000047383226,0.00013869189,0.00005115709,0.0001652425,0.00005662014],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052357774,0.00108702,0.009848331,0.00003051987,0.00030836818,0.000766391,0.0010904401,0.000018229952,0.70926,0.00035170835,0.27562645,0.0010889912],"study_design_scores_gemma":[0.027174067,0.00992289,0.009369125,0.00007702671,0.00123498,0.0066311164,0.0043812613,0.000057649806,0.6656633,0.0004140563,0.27262366,0.0024508643],"about_ca_topic_score_codex":0.016036509,"about_ca_topic_score_gemma":0.0014427307,"teacher_disagreement_score":0.043596685,"about_ca_system_score_codex":0.000044515244,"about_ca_system_score_gemma":0.00025748208,"threshold_uncertainty_score":0.99051577},"labels":[],"label_agreement":null},{"id":"W7103298040","doi":"","title":"Summary of the National Advisory Committee on Immunizationâs Update on quadrivalent meningococcal vaccines available in Canada","year":2015,"lang":"en","type":"article","venue":"PubMed Central","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Advisory committee; Meningococcal vaccine; Meningococcal disease; Neisseria meningitidis; Meningococcal Infections; Vaccination","score_opus":0.02305446162303555,"score_gpt":0.21674570534574156,"score_spread":0.19369124372270602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7103298040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99260724,0.00021241319,0.0000014057399,0.0010819713,0.0026133147,0.0002499866,0.00006655656,0.000013031407,0.0031541006],"genre_scores_gemma":[0.99799603,0.00003677084,0.000004099268,0.00030720135,0.000077813034,0.000043813106,0.000082335966,0.000008912157,0.0014430333],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989259,0.00018684487,0.00025305658,0.00013910074,0.000046328267,0.00044871678],"domain_scores_gemma":[0.99954784,0.00007234568,0.000098681565,0.00016159446,0.00007885508,0.000040687275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026252333,0.000112197675,0.0001580286,0.00006422135,0.00007737771,0.00000741822,0.00019637836,0.000070827926,0.00037481895],"category_scores_gemma":[0.0001506112,0.0000813076,0.00003778963,0.0001700245,0.000027079179,0.000057717898,0.000058798807,0.0001953472,0.000045994275],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050992117,0.0004048791,0.61182016,0.000014001946,0.00012463616,7.175746e-7,0.0001635812,0.0015036664,0.006073967,0.0030506435,0.37478447,0.0015493511],"study_design_scores_gemma":[0.001575147,0.000042494914,0.7948075,0.000024843099,0.000010186496,0.0000064126425,0.000075522184,0.000017968328,0.01561476,0.000077020435,0.18762745,0.00012069034],"about_ca_topic_score_codex":0.14128017,"about_ca_topic_score_gemma":0.26898664,"teacher_disagreement_score":0.18715702,"about_ca_system_score_codex":0.00053122704,"about_ca_system_score_gemma":0.00075618445,"threshold_uncertainty_score":0.8644381},"labels":[],"label_agreement":null},{"id":"W7103304601","doi":"","title":"Meningococco B: controllo di due focolai epidemici\\nmediante vaccinazione","year":2014,"lang":"en","type":"article","venue":"PubMed Central","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Population; Significant difference","score_opus":0.009841558531889772,"score_gpt":0.2129540229738331,"score_spread":0.2031124644419433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7103304601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876839,0.00051779585,0.0015436724,0.00128272,0.006089924,0.00065691874,0.000029633751,0.00019460791,0.002000839],"genre_scores_gemma":[0.99665815,0.00005028637,0.000025464147,0.00024933048,0.00075172307,0.0002998162,0.00007270481,0.000023218452,0.001869316],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99758804,0.0002578534,0.00035891603,0.000313543,0.000018011504,0.0014636634],"domain_scores_gemma":[0.9991965,0.00021135919,0.00013483319,0.00028248268,0.000043830503,0.00013094059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006039201,0.00021561701,0.00041632095,0.0000859607,0.0002291213,0.000033550543,0.00019174414,0.00025324296,0.00061820546],"category_scores_gemma":[0.00043300304,0.00018233946,0.00014546824,0.00012573654,0.000056461264,0.00014923619,0.0000633332,0.00028409468,0.00033312113],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008366781,0.0004921271,0.37324664,0.000048747155,0.00075023586,0.000006107631,0.0005050388,0.0000365807,0.463124,0.017413357,0.032545332,0.11099515],"study_design_scores_gemma":[0.0030423244,0.00008299537,0.6533789,0.000011138571,0.000066992114,0.00008276675,0.000020139349,0.000024419165,0.017831964,0.00027090704,0.3249442,0.00024325115],"about_ca_topic_score_codex":0.00015729872,"about_ca_topic_score_gemma":0.000116246265,"teacher_disagreement_score":0.44529203,"about_ca_system_score_codex":0.00008423058,"about_ca_system_score_gemma":0.000035317047,"threshold_uncertainty_score":0.7435587},"labels":[],"label_agreement":null},{"id":"W7103307739","doi":"","title":"Increase in Neisseria meningitidis serogroup W invasive disease in Canada: 2009â2016","year":2017,"lang":"en","type":"article","venue":"PubMed Central","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Disease; Neisseria; Serotype; Meningococcal disease","score_opus":0.011852120599247359,"score_gpt":0.2073717561023624,"score_spread":0.19551963550311502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7103307739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964975,0.00037183127,6.57757e-7,0.0005381018,0.0018539075,0.00027936115,0.000083503975,0.000013871804,0.00036125118],"genre_scores_gemma":[0.9991861,0.00009087159,0.0000030698252,0.00005484152,0.000090340414,0.00012933818,0.00008162859,0.000010367544,0.00035344544],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998459,0.00008803529,0.00021700264,0.00022638866,0.000011348402,0.0009982287],"domain_scores_gemma":[0.99938047,0.000042361364,0.00009827359,0.0003229099,0.000015426069,0.00014057386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014451866,0.00013899384,0.00020384454,0.00006777679,0.00016532447,0.00004380014,0.00022921934,0.000074564115,0.0003899748],"category_scores_gemma":[0.00034499686,0.00012881955,0.0000369253,0.000052881103,0.000047439415,0.00023033265,0.00008758859,0.0001695389,0.000023710707],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021706351,0.0000775907,0.99139905,0.0000093372755,0.00002450901,0.000028094762,0.00005083904,0.00000798929,0.0045043835,0.00017438883,0.0011840786,0.002322669],"study_design_scores_gemma":[0.0013645693,0.000008075327,0.99098164,0.00002487441,0.000011782364,0.0000068145046,0.000043664197,0.000002388144,0.001997664,0.000056403504,0.0053541698,0.00014795637],"about_ca_topic_score_codex":0.91039944,"about_ca_topic_score_gemma":0.9783598,"teacher_disagreement_score":0.06796033,"about_ca_system_score_codex":0.00050718896,"about_ca_system_score_gemma":0.00092796364,"threshold_uncertainty_score":0.5253109},"labels":[],"label_agreement":null},{"id":"W7103428512","doi":"","title":"Canadian paediatriciansâ approaches to managing patients with adverse events following immunization: The role of the Special Immunization Clinic network","year":2014,"lang":"en","type":"article","venue":"PubMed Central","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Adverse effect; Immunization; Vaccination; MEDLINE","score_opus":0.009229961698547702,"score_gpt":0.16725922828040812,"score_spread":0.15802926658186042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7103428512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933004,0.000093430455,0.00013077582,0.00046353356,0.0038502333,0.00062173133,0.000012207982,0.000015817204,0.0015119016],"genre_scores_gemma":[0.99877095,0.000008589518,0.000028746877,0.000109807486,0.00068319286,0.000038350932,0.00009822782,0.000014615216,0.0002475269],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99872273,0.00024110143,0.0002239503,0.00014162077,0.000029313582,0.00064128183],"domain_scores_gemma":[0.9994601,0.000045799512,0.00011897811,0.0002890475,0.000033502445,0.00005259577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031931614,0.000116473246,0.00014277844,0.000052800133,0.00045775558,0.000010761433,0.0002746479,0.00008996405,0.000090344874],"category_scores_gemma":[0.000064231215,0.00007113182,0.00008434739,0.0004057755,0.000027396478,0.00008731639,0.00007018606,0.00013959759,0.000020885418],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005235291,0.000042258638,0.98662454,0.0000025210368,0.00011125845,2.7705466e-8,0.0003663594,0.0008537616,0.000019609071,0.00062411604,0.00036659307,0.010936632],"study_design_scores_gemma":[0.00057210715,0.000028496408,0.9579699,0.0000127905505,0.000073427786,6.474374e-7,0.00013374396,0.00001507415,0.00010141247,0.00009645414,0.040900435,0.00009550981],"about_ca_topic_score_codex":0.0035575975,"about_ca_topic_score_gemma":0.014519221,"teacher_disagreement_score":0.04053384,"about_ca_system_score_codex":0.00010898408,"about_ca_system_score_gemma":0.00007957944,"threshold_uncertainty_score":0.81020665},"labels":[],"label_agreement":null},{"id":"W7103428790","doi":"","title":"Invasive disease due to Haemophilus influenzae type A in children in Canadaâs north: A priority for prevention","year":2015,"lang":"en","type":"article","venue":"PubMed Central","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nucleofection; Gestational period; TSG101; Liquation; Dysgeusia; Diafiltration; Emperipolesis; Triacetin; Durvalumab","score_opus":0.02284520913374969,"score_gpt":0.2448743517225669,"score_spread":0.22202914258881723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7103428790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967884,0.00023031996,0.000011761818,0.0004163775,0.0011382186,0.001289312,0.0000848884,0.000020636817,0.000020073387],"genre_scores_gemma":[0.999019,0.000008281098,0.000022492657,0.00013067335,0.000115253,0.00030885922,0.0002373958,0.000009035314,0.00014896427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988224,0.000080468926,0.00020363292,0.00020629918,0.000013674877,0.0006735284],"domain_scores_gemma":[0.99959064,0.0000240888,0.000042790754,0.00013092997,0.00005007488,0.00016150207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016649427,0.000107198604,0.00017676144,0.00012694146,0.000038816892,0.0000144148,0.000093472685,0.000085814725,0.000018699104],"category_scores_gemma":[0.0004933305,0.00010487423,0.00003786608,0.00023898213,0.000017089476,0.00010473154,0.000043561733,0.00011076522,0.000016281687],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005995741,0.0001759561,0.99358505,0.000008395372,0.000033995566,0.000002829992,0.00025780874,0.000073195995,0.00039441203,0.00010480833,0.0014524754,0.0033115107],"study_design_scores_gemma":[0.0018500409,0.00007209671,0.99215555,0.000012849679,0.00001676057,0.000012515566,0.000018257715,0.0000011442313,0.0004075353,0.00022167606,0.005110583,0.00012097696],"about_ca_topic_score_codex":0.006532735,"about_ca_topic_score_gemma":0.12629518,"teacher_disagreement_score":0.11976244,"about_ca_system_score_codex":0.0002685615,"about_ca_system_score_gemma":0.0003978252,"threshold_uncertainty_score":0.98755854},"labels":[],"label_agreement":null},{"id":"W7103529205","doi":"","title":"Parentsâ and adolescentsâ willingness to be vaccinated against serogroup B meningococcal disease during a mass vaccination in SaguenayâLac-St-Jean (Quebec)","year":2015,"lang":"en","type":"article","venue":"PubMed Central","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Mass vaccination; Meningococcal disease; Vaccination; Meningococcal vaccine; Meningitis; Incidence (geometry); Vaccination schedule","score_opus":0.018817763853477002,"score_gpt":0.2280485416754802,"score_spread":0.2092307778220032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7103529205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959092,0.00038262847,0.00007746908,0.0010813075,0.0015675292,0.00075667154,0.0000525449,0.00012279274,0.00004983395],"genre_scores_gemma":[0.99871314,0.000058552603,0.000015566695,0.00011960312,0.00015379186,0.00020430576,0.00025910186,0.000027648466,0.0004483059],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977954,0.00018452425,0.0003592901,0.00044366342,0.000038365564,0.0011787693],"domain_scores_gemma":[0.9991924,0.000027367576,0.000090947724,0.00021221788,0.00007512397,0.00040191016],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030260984,0.00025859431,0.00028736467,0.00018733513,0.00013994503,0.00007961975,0.00015297178,0.00017267752,0.00007001723],"category_scores_gemma":[0.00021954603,0.0002492746,0.000056326946,0.00030987457,0.000020122332,0.00030820607,0.00011044752,0.00024539832,0.000020315372],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012136777,0.00037742264,0.9608339,0.000067282344,0.000084046296,0.00001694056,0.0007982297,0.00028518992,0.023986587,0.00009714752,0.00069723674,0.011542329],"study_design_scores_gemma":[0.0037413265,0.0000355705,0.9854437,0.0000434281,0.000034237197,0.0000068631484,0.00022249766,0.000045054687,0.0044067563,0.000027989016,0.005693525,0.00029901363],"about_ca_topic_score_codex":0.0008468654,"about_ca_topic_score_gemma":0.0029978713,"teacher_disagreement_score":0.024609828,"about_ca_system_score_codex":0.00037369598,"about_ca_system_score_gemma":0.00007693306,"threshold_uncertainty_score":0.99999595},"labels":[],"label_agreement":null},{"id":"W7105910346","doi":"10.6084/m9.figshare.30637250","title":"Impact of a multicomponent intervention on maternal Tdap vaccination coverage during a major pertussis resurgence in the province of Quebec, Canada: A quasi-experimental study","year":2025,"lang":"","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; Intervention (counseling); Logistic regression; Pertussis vaccine; Pregnancy; Whooping cough","score_opus":0.01453951275302981,"score_gpt":0.2914467302318519,"score_spread":0.2769072174788221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7105910346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97292185,0.00067090656,5.0081377e-7,0.00004945439,0.0003110625,0.0011978858,0.02478691,0.0000070204273,0.000054434546],"genre_scores_gemma":[0.99708885,0.0000069986845,3.9755253e-7,0.000006827844,0.000015912008,0.00019539402,0.0022011388,0.000009249186,0.0004752189],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998037,0.00061123667,0.0007390772,0.0003069001,0.000057534435,0.00024829363],"domain_scores_gemma":[0.99890614,0.00017810795,0.00044603646,0.00032719158,0.00012726361,0.000015283405],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014128623,0.0002428877,0.00040898222,0.0002373392,0.00014700252,0.000031399257,0.00029498944,0.00013584578,0.035306234],"category_scores_gemma":[0.00023490978,0.00017944118,0.00021229225,0.00025834408,0.000008853545,0.00012735624,0.00015708143,0.00025451518,0.000014074169],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020818729,0.09844953,0.26760298,0.005020737,0.00458807,0.00016728319,0.009887173,0.0006265847,0.5402641,0.00010630219,0.037902646,0.014565808],"study_design_scores_gemma":[0.0029476103,0.001488382,0.9320444,0.002457476,0.0000371357,0.000007913116,0.0007578032,0.00003925636,0.05997626,0.000001182038,0.000108108165,0.00013446138],"about_ca_topic_score_codex":0.6274957,"about_ca_topic_score_gemma":0.73090565,"teacher_disagreement_score":0.6644414,"about_ca_system_score_codex":0.0005930829,"about_ca_system_score_gemma":0.0005312563,"threshold_uncertainty_score":0.96557564},"labels":[],"label_agreement":null},{"id":"W7105923002","doi":"10.6084/m9.figshare.30637250.v1","title":"Impact of a multicomponent intervention on maternal Tdap vaccination coverage during a major pertussis resurgence in the province of Quebec, Canada: A quasi-experimental study","year":2025,"lang":"","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; Intervention (counseling); Logistic regression; Pertussis vaccine; Pregnancy; Whooping cough","score_opus":0.01453951275302981,"score_gpt":0.2914467302318519,"score_spread":0.2769072174788221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7105923002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97292185,0.00067090656,5.0081377e-7,0.00004945439,0.0003110625,0.0011978858,0.02478691,0.0000070204273,0.000054434546],"genre_scores_gemma":[0.99708885,0.0000069986845,3.9755253e-7,0.000006827844,0.000015912008,0.00019539402,0.0022011388,0.000009249186,0.0004752189],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998037,0.00061123667,0.0007390772,0.0003069001,0.000057534435,0.00024829363],"domain_scores_gemma":[0.99890614,0.00017810795,0.00044603646,0.00032719158,0.00012726361,0.000015283405],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014128623,0.0002428877,0.00040898222,0.0002373392,0.00014700252,0.000031399257,0.00029498944,0.00013584578,0.035306234],"category_scores_gemma":[0.00023490978,0.00017944118,0.00021229225,0.00025834408,0.000008853545,0.00012735624,0.00015708143,0.00025451518,0.000014074169],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020818729,0.09844953,0.26760298,0.005020737,0.00458807,0.00016728319,0.009887173,0.0006265847,0.5402641,0.00010630219,0.037902646,0.014565808],"study_design_scores_gemma":[0.0029476103,0.001488382,0.9320444,0.002457476,0.0000371357,0.000007913116,0.0007578032,0.00003925636,0.05997626,0.000001182038,0.000108108165,0.00013446138],"about_ca_topic_score_codex":0.6274957,"about_ca_topic_score_gemma":0.73090565,"teacher_disagreement_score":0.6644414,"about_ca_system_score_codex":0.0005930829,"about_ca_system_score_gemma":0.0005312563,"threshold_uncertainty_score":0.96557564},"labels":[],"label_agreement":null},{"id":"W7111572710","doi":"","title":"Cost-effectiveness of vaccination against meningococcal B among Dutch infants: Crucial impact of changes in incidence","year":2013,"lang":"en","type":"article","venue":"Bristol Research (University of Bristol)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Vaccination; Incidence (geometry); Meningococcal disease; Disease; Meningococcal vaccine; Cohort","score_opus":0.05197489422563294,"score_gpt":0.33907372517250395,"score_spread":0.287098830946871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7111572710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979654,0.0001914234,0.00012436022,0.00004632211,0.00009453795,0.0008473392,0.000055160424,0.000013939685,0.0006615019],"genre_scores_gemma":[0.99955666,0.00015251643,0.0000359441,7.791925e-7,0.000010194798,0.000006529747,0.00004822739,0.000008603491,0.00018057284],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998252,0.000869776,0.00022193129,0.00025220058,0.00007869253,0.0003254406],"domain_scores_gemma":[0.99817556,0.00042513298,0.00024354908,0.00025959403,0.0008552098,0.000040928135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011952191,0.00012094945,0.00045989102,0.00073696143,0.0001565443,0.000008626953,0.00036674272,0.0002450771,0.00070165354],"category_scores_gemma":[0.00036131003,0.0001339775,0.00012313644,0.0007368361,0.00039454515,0.0003835951,0.00025478055,0.0003370892,0.00003095669],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007743719,0.00034396964,0.27429822,0.00016311918,0.00012284859,0.0000040621003,0.000979739,0.000031708398,0.7050322,0.00009935649,0.0008567912,0.01729356],"study_design_scores_gemma":[0.0016545644,0.00053043035,0.970744,0.00019743791,0.000011842558,0.000005547741,0.0011027262,0.000068222915,0.025176324,0.000082528684,0.00031092856,0.0001154033],"about_ca_topic_score_codex":0.05713962,"about_ca_topic_score_gemma":0.005513103,"teacher_disagreement_score":0.6964458,"about_ca_system_score_codex":0.00027726634,"about_ca_system_score_gemma":0.00019507436,"threshold_uncertainty_score":0.94913894},"labels":[],"label_agreement":null},{"id":"W7111790118","doi":"","title":"The Role of Economic Modelling Studies in Vaccine Decision Making: Focus on Meningococcal C Vaccination","year":2005,"lang":"en","type":"article","venue":"Bristol Research (University of Bristol)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; Meningococcal disease; Incidence (geometry); Meningococcal vaccine; Vaccination schedule; Mass vaccination; Conjugate vaccine; Economic impact analysis","score_opus":0.0604829962448401,"score_gpt":0.3426993959921655,"score_spread":0.2822163997473254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7111790118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935948,0.003684935,0.00045007517,0.0005105577,0.0001349475,0.00023495738,0.000012193541,0.000014762399,0.0013627729],"genre_scores_gemma":[0.99827474,0.0010240922,0.00021970534,0.0000014872477,0.000027785063,0.0000012086404,0.000004890484,0.000007758785,0.00043834318],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989429,0.00025940235,0.0002405954,0.0002339112,0.000050789506,0.00027238618],"domain_scores_gemma":[0.998619,0.0007031584,0.00015259258,0.0002614937,0.0002467414,0.000017008646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010005459,0.00009603886,0.00027237207,0.00039790472,0.00046693895,0.000009402295,0.00033352786,0.00012811042,0.00012508848],"category_scores_gemma":[0.000109318855,0.00009159179,0.00008107952,0.0002280598,0.0001321924,0.00016221633,0.00019759784,0.00030372446,0.00009584425],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0070796385,0.000822824,0.008052781,0.00006463403,0.0004943813,0.000008095629,0.0043565235,0.011872058,0.067651354,0.02537593,0.0140852975,0.8601365],"study_design_scores_gemma":[0.020161971,0.004653126,0.08152483,0.0014773492,0.00020721092,0.00014850729,0.06333388,0.046411507,0.0774068,0.061473295,0.6416571,0.0015444026],"about_ca_topic_score_codex":0.00110347,"about_ca_topic_score_gemma":0.0035150847,"teacher_disagreement_score":0.8585921,"about_ca_system_score_codex":0.00033696205,"about_ca_system_score_gemma":0.00007503304,"threshold_uncertainty_score":0.3735005},"labels":[],"label_agreement":null},{"id":"W7116785396","doi":"10.51200/bej.v6i1.6416","title":"CLOSING THE IMMUNITY GAP: A NARRATIVE REVIEW ON IMPROVING HEALTHCARE WORKER PERTUSSIS VACCINATION IN MALAYSIA THROUGH LESSONS FROM THE GLOBAL EXPERIENCE","year":2025,"lang":"","type":"article","venue":"Borneo Epidemiology Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Vaccination; Health care; Government (linguistics); Public health; Vaccination policy; Whooping cough; Health policy; Narrative review","score_opus":0.078716134149285,"score_gpt":0.40412255028627153,"score_spread":0.3254064161369865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7116785396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47185722,0.26341176,0.0015317369,0.25824732,0.0034018415,0.0008980106,0.000082807004,0.000026267091,0.00054301746],"genre_scores_gemma":[0.89708585,0.08603475,0.00018302626,0.015989708,0.0003528412,0.0001346257,0.00004211319,0.000017655475,0.00015943157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.982169,0.014076228,0.0019379604,0.0007221817,0.000048121776,0.0010465089],"domain_scores_gemma":[0.9910896,0.0060474384,0.0014669163,0.00093367003,0.00040069522,0.000061692685],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00489756,0.00060899975,0.0014115276,0.00009076313,0.003344112,0.000087462555,0.0009694003,0.00078814826,0.0008882773],"category_scores_gemma":[0.0051719807,0.000317722,0.00040609532,0.001017367,0.0005232888,0.00035984113,0.00031116782,0.003528385,0.000029607032],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004847863,0.0011114669,0.57817686,0.000454947,0.0026184442,0.000041569205,0.02396172,0.0003809398,0.001911149,0.05229877,0.04009203,0.29410425],"study_design_scores_gemma":[0.0024508787,0.0007130557,0.916165,0.011782369,0.0004913287,0.0010233066,0.01606599,0.00012604705,0.00012052916,0.01625642,0.034240533,0.00056456804],"about_ca_topic_score_codex":0.0065617985,"about_ca_topic_score_gemma":0.0027387552,"teacher_disagreement_score":0.42522863,"about_ca_system_score_codex":0.00075866334,"about_ca_system_score_gemma":0.0007404437,"threshold_uncertainty_score":0.99992746},"labels":[],"label_agreement":null},{"id":"W7117145486","doi":"10.64898/2025.12.22.696083","title":"Outer Membrane Vesicles Hijack TIM-1 for Cellular Uptake","year":2025,"lang":"","type":"article","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Gilead Sciences (Canada); McMaster University","funders":"","keywords":"Internalization; Bacterial outer membrane; Lipopolysaccharide; Proinflammatory cytokine; Transmembrane protein; Effector; Vesicle; Receptor","score_opus":0.011672630010606205,"score_gpt":0.21865838636313756,"score_spread":0.20698575635253136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117145486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9737543,0.0070169484,0.0041906205,0.0013410656,0.01138232,0.0013961451,0.0005359515,0.00033536102,0.000047311896],"genre_scores_gemma":[0.9961403,0.0006721912,0.0009935847,0.00032783774,0.0008154425,0.0002547633,0.0000012729445,0.000109245666,0.0006853873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99655014,0.00023778375,0.0009917365,0.0010985769,0.000041019608,0.0010807541],"domain_scores_gemma":[0.9974663,0.00021694113,0.0003474967,0.0011986273,0.00065351755,0.000117115575],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006525662,0.0007218139,0.00090967084,0.00044187283,0.00082924735,0.00022962954,0.00053872383,0.0010868603,0.0011595599],"category_scores_gemma":[0.000231356,0.000757316,0.00040007735,0.0008203127,0.00026989845,0.00031703195,0.00020449035,0.0005023028,0.00045405672],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032657417,0.00035863576,0.0010688803,0.00038503893,0.0009048611,0.0000059273084,0.000008192878,0.0000059836557,0.98636,0.005341341,0.0052087912,0.000025749187],"study_design_scores_gemma":[0.0019758085,0.00016473985,0.00942333,0.00019690092,0.00036740032,2.5293344e-8,0.0000048377296,0.000044905595,0.63714945,0.0000018306902,0.35017803,0.0004927298],"about_ca_topic_score_codex":0.000048349437,"about_ca_topic_score_gemma":0.0000050132066,"teacher_disagreement_score":0.34921056,"about_ca_system_score_codex":0.0001667455,"about_ca_system_score_gemma":0.00049033813,"threshold_uncertainty_score":0.99975353},"labels":[],"label_agreement":null},{"id":"W7117358089","doi":"10.61440/jidt.2025.v3.47","title":"A Global Review of Invasive Haemophilus Influenzae Diseases from 2000-2023: A Systematic Review of Current Status, Challenges, and Future Perspectives","year":2025,"lang":"","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Disease; Incidence (geometry); Transmission (telecommunications); Review article; Systematic review; Pathogen; Bacterial disease","score_opus":0.01802731529339077,"score_gpt":0.294041453029179,"score_spread":0.27601413773578826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117358089","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0059218765,0.98402345,0.0000061399887,0.0020534585,0.0016153137,0.0028565945,0.002495973,0.000027653836,0.0009995649],"genre_scores_gemma":[0.012488193,0.98652655,0.0000141765,0.0003984182,0.00012657189,0.00014472485,0.00014458755,0.000011328357,0.00014546979],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9957994,0.0012352715,0.0018407173,0.00067094003,0.00005727197,0.00039635925],"domain_scores_gemma":[0.9966961,0.00041285122,0.0010682384,0.00084563205,0.0008937447,0.000083429804],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00033156684,0.0005406709,0.0030553434,0.00014682689,0.0001279807,0.000014810801,0.00028797652,0.0002966568,0.0022212178],"category_scores_gemma":[0.0011034602,0.00040969416,0.00048545704,0.0005849463,0.00032875707,0.00017797972,0.0003501375,0.00025473538,0.000021014192],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012677939,0.0007065876,0.00046149804,0.97228384,0.0022372762,0.0000010673075,0.00046657666,2.0412418e-8,0.00019044246,0.013669483,0.0046009943,0.0052554226],"study_design_scores_gemma":[0.0011790761,0.00030085098,0.012058009,0.95507807,0.0062473775,0.000021753713,0.002725068,1.7480072e-7,0.00007012595,0.0005330142,0.021427127,0.0003593321],"about_ca_topic_score_codex":0.0004886714,"about_ca_topic_score_gemma":0.00022753784,"teacher_disagreement_score":0.017205762,"about_ca_system_score_codex":0.00017881222,"about_ca_system_score_gemma":0.00087890006,"threshold_uncertainty_score":0.9998355},"labels":[],"label_agreement":null},{"id":"W7118619183","doi":"10.1093/ofid/ofaf809","title":"Controlled Human Infection of Healthy Adults With Lyophilized <i>Neisseria lactamica</i> Induces Asymptomatic, Immunogenic Nasopharyngeal Carriage in the United Kingdom and Mali","year":2025,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Office of Community Development; National Institute for Health and Care Research; Novavax; Government of the United Kingdom; National Institute for Health Research Southampton Biomedical Research Centre; Sanofi; Seqirus; University Hospital Southampton NHS Foundation Trust; GlaxoSmithKline; University College London; AstraZeneca; Afromontane Research Unit, University of the Free State; Pfizer","keywords":"Carriage; Transmission (telecommunications); Meningitis; Nasal administration; Colonization; Bacterial meningitis; Clinical trial; Infection control","score_opus":0.012201510181925515,"score_gpt":0.2872415680813064,"score_spread":0.2750400578993809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7118619183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99522865,0.0008932353,0.0000055502956,0.0003086807,0.0004192012,0.0019313692,0.00005587275,0.00006932537,0.0010881099],"genre_scores_gemma":[0.9987231,0.00013439415,0.0000024044914,0.0003462113,0.000017121389,0.00044964268,0.0002476609,0.000017528188,0.000061922336],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998194,0.00059289124,0.0005373693,0.0003204411,0.00002632225,0.00032896953],"domain_scores_gemma":[0.9988749,0.0003087955,0.00030586676,0.00035884476,0.0001242154,0.000027382457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027368468,0.00027110963,0.0006714567,0.00039325122,0.00056185864,0.00013632476,0.00027014088,0.00017468969,0.00014895589],"category_scores_gemma":[0.00009817048,0.00018235213,0.00010656938,0.0007054015,0.00018044222,0.00027889237,0.00017170742,0.00023050264,0.0000065164118],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017122155,0.0023859942,0.8725156,0.00032043128,0.001390093,0.0000038899934,0.0006344677,0.000024620818,0.08739557,0.016045107,0.0011508069,0.0010112674],"study_design_scores_gemma":[0.0655932,0.0035248464,0.9199903,0.0006325646,0.0006941376,0.00011473118,0.00072202337,0.0000151197955,0.0030686413,0.0014881681,0.0036207738,0.0005355173],"about_ca_topic_score_codex":0.01607639,"about_ca_topic_score_gemma":0.0040960405,"teacher_disagreement_score":0.08432693,"about_ca_system_score_codex":0.000053400025,"about_ca_system_score_gemma":0.00012810137,"threshold_uncertainty_score":0.99047565},"labels":[],"label_agreement":null},{"id":"W7124844912","doi":"10.6084/m9.figshare.31097314","title":"Additional file 1 of Test-adjusted estimation for pertussis incidence in greater Toronto, Canada, 1993–2006","year":2025,"lang":"","type":"article","venue":"Open MIND","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Incidence (geometry); Estimation; Whooping cough; Epidemiology; Statistical analysis","score_opus":0.017709754031848567,"score_gpt":0.2683848197061611,"score_spread":0.2506750656743126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7124844912","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.059661586,0.0002741452,0.000031682554,0.00038432534,0.00094414875,0.001143244,0.92778605,0.0000014216847,0.009773382],"genre_scores_gemma":[0.59067863,0.00004349317,0.0077601257,0.00020386289,0.00013464486,0.0021165917,0.2096062,0.00003322337,0.1894232],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987405,0.00008412945,0.00054991985,0.00034175147,0.000018291461,0.00026543954],"domain_scores_gemma":[0.997453,0.0018854092,0.00022005814,0.00022857157,0.00019278373,0.000020212936],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000108168075,0.00018655526,0.00038133498,0.000078510806,0.00018707452,0.00004340856,0.000285881,0.0002642504,0.9344561],"category_scores_gemma":[0.0011151864,0.00018169924,0.00006266972,0.00017905177,0.00007405717,0.00030137197,0.00016371901,0.000110390676,0.00007549457],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020865437,0.00018024849,0.00081789016,0.00003096438,0.00009251762,8.216964e-7,0.00009857431,0.000011825522,0.0030251008,0.000011640336,0.9388888,0.05663299],"study_design_scores_gemma":[0.0011407111,0.00020483445,0.09716973,0.0008042281,0.00007350954,0.000013406502,0.00024351002,0.00036986705,0.0055752527,0.000023314755,0.8941716,0.00021005738],"about_ca_topic_score_codex":0.5205529,"about_ca_topic_score_gemma":0.9191146,"teacher_disagreement_score":0.93438065,"about_ca_system_score_codex":0.0003120225,"about_ca_system_score_gemma":0.0015953183,"threshold_uncertainty_score":0.740948},"labels":[],"label_agreement":null},{"id":"W7124904035","doi":"10.6084/m9.figshare.31097314.v1","title":"Additional file 1 of Test-adjusted estimation for pertussis incidence in greater Toronto, Canada, 1993–2006","year":2025,"lang":"","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Incidence (geometry); Estimation; Whooping cough; Epidemiology; Statistical analysis","score_opus":0.01578963483310759,"score_gpt":0.2368925077940945,"score_spread":0.2211028729609869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7124904035","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039623363,0.00045803722,0.0000011433224,0.00010418893,0.0002990735,0.00043776282,0.99690104,0.000014305255,0.0013882391],"genre_scores_gemma":[0.036985952,0.000004219906,0.00010903502,0.00011246859,0.00005651496,0.001980423,0.9496247,0.000011330018,0.011115366],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99883735,0.00006123631,0.00048299285,0.00030055316,0.000021995229,0.00029584137],"domain_scores_gemma":[0.99623835,0.0029855664,0.00022161234,0.00021401816,0.000319164,0.000021274433],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000024871782,0.0002091199,0.0003332375,0.000093847986,0.00016660485,0.000018114628,0.00016899053,0.00033688208,0.996466],"category_scores_gemma":[0.0061129746,0.00021005134,0.000096060125,0.00020338601,0.00001614013,0.00019313274,0.00009001593,0.00013657915,0.00019894102],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061900035,0.0000905055,0.00010922532,0.0002649073,0.00006064884,7.9352895e-7,0.000031130337,0.000012697993,0.00037323614,0.000005994978,0.99473923,0.0042497553],"study_design_scores_gemma":[0.0005692231,0.00012166235,0.11660202,0.005304384,0.000027452119,0.0000097495695,0.000057179135,0.0004602505,0.0012628594,0.000013486716,0.87537795,0.00019380964],"about_ca_topic_score_codex":0.16956733,"about_ca_topic_score_gemma":0.73746854,"teacher_disagreement_score":0.9962671,"about_ca_system_score_codex":0.00034824523,"about_ca_system_score_gemma":0.0012922228,"threshold_uncertainty_score":0.8565645},"labels":[],"label_agreement":null},{"id":"W7126162899","doi":"10.1016/j.jns.2025.123939","title":"Elsevier – Best clinical paper awards - The burden of chronic neuroinfectious diseases in sub-Saharan Africa: Preliminary insights from an ongoing cohort study in Maputo Central Hospital, Mozambique","year":2025,"lang":"en","type":"article","venue":"Journal of the Neurological Sciences","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Cohort study; Public health; Toxoplasmosis; Chronic disease; Cohort; Tuberculosis","score_opus":0.017302498637230136,"score_gpt":0.29131987777310187,"score_spread":0.2740173791358717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7126162899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918114,0.0026592189,0.0000012248015,0.002542559,0.0024351343,0.0004548205,0.0000053938315,0.0000074852146,0.000082798266],"genre_scores_gemma":[0.99883604,0.00081380253,0.000001629286,0.00014181434,0.00016551297,0.000010323103,7.3641036e-7,0.0000034287746,0.000026729633],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969138,0.0017026,0.00076310727,0.00028711304,0.0000695819,0.00026382154],"domain_scores_gemma":[0.99862844,0.000703958,0.00034677185,0.00023059137,0.000060130988,0.000030083955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007322096,0.00014366122,0.0004306132,0.00011551476,0.00024314599,0.00004545426,0.00073814957,0.00013860574,0.000048667123],"category_scores_gemma":[0.0005350131,0.00006594015,0.00017833056,0.00053342304,0.0005236636,0.00025252483,0.00023876726,0.00066071056,0.0000025183544],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026041246,0.0020852988,0.98453164,0.000003120266,0.000049018014,0.000016863438,0.00015456235,0.0010307851,0.008031155,0.00001479293,0.00025604694,0.0035662919],"study_design_scores_gemma":[0.00075753825,0.005909223,0.9894505,0.000045194116,0.00008142403,0.000019496058,0.00008479624,0.000088833556,0.00014560802,0.00042561913,0.002921346,0.00007041397],"about_ca_topic_score_codex":0.00032175475,"about_ca_topic_score_gemma":0.00038447493,"teacher_disagreement_score":0.007885546,"about_ca_system_score_codex":0.000029538724,"about_ca_system_score_gemma":0.00017052026,"threshold_uncertainty_score":0.28704953},"labels":[],"label_agreement":null},{"id":"W7126746117","doi":"","title":"Propuesta de REGLAMENTO DEL CONSEJO por el que se establece el modelo comunitario de clasificación de las canales de vacuno pesado","year":2005,"lang":"es","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Field (mathematics); Quarter (Canadian coin); Census","score_opus":0.019955684203731863,"score_gpt":0.2861553513245708,"score_spread":0.266199667120839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7126746117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834677,0.0025988147,0.0048757372,0.004014578,0.0003747186,0.0005345464,0.00019486404,0.00023483022,0.003704241],"genre_scores_gemma":[0.9714279,0.0017414968,0.00350049,0.0011731307,0.00030396285,0.0000890102,0.0001691979,0.00007646575,0.021518348],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.996272,0.00085378886,0.00071064814,0.0005700125,0.00003948226,0.0015540265],"domain_scores_gemma":[0.99826354,0.00030067255,0.00025363636,0.00067432027,0.00026750585,0.00024032564],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008454715,0.000573154,0.0006586089,0.0002669986,0.00076303835,0.00018486693,0.00046703892,0.0010191278,0.002250321],"category_scores_gemma":[0.00018149312,0.00054192566,0.00022066018,0.00026265887,0.00028791744,0.000286393,0.00017632713,0.0009198375,0.00030323135],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011215182,0.001741619,0.122586705,0.0002106589,0.0011779353,0.000044610795,0.0032836262,0.001322699,0.77426136,0.050302804,0.039327886,0.004618604],"study_design_scores_gemma":[0.0073060673,0.001559114,0.06770848,0.0005885487,0.0014607048,0.0052713878,0.0037324275,0.008041671,0.2325023,0.0033101325,0.66593826,0.0025809128],"about_ca_topic_score_codex":0.091355845,"about_ca_topic_score_gemma":0.067610234,"teacher_disagreement_score":0.62661034,"about_ca_system_score_codex":0.001098276,"about_ca_system_score_gemma":0.0026281907,"threshold_uncertainty_score":0.9997032},"labels":[],"label_agreement":null},{"id":"W7128516227","doi":"10.1016/s0014-2565(26)00305-x","title":"1732 - INFECCIÓN POR LEGIONELLA SPP.: ESPECTRO CLÍNICO Y SEVERIDAD EN UNA COHORTE PROVINCIAL (2015-2025)","year":2025,"lang":"en","type":"article","venue":"Revista Clínica Española","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Legionella; Work (physics); Quarter (Canadian coin); Dirt","score_opus":0.007648286852137751,"score_gpt":0.27661708996085255,"score_spread":0.2689688031087148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7128516227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95994896,0.010787552,0.00051564915,0.0034871297,0.0032460056,0.0014882025,0.00015738854,0.0006162823,0.019752815],"genre_scores_gemma":[0.9609179,0.001329683,0.00009850055,0.00046101862,0.00040742822,0.000100662786,0.0002709436,0.00005038307,0.036363486],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972469,0.00043586444,0.0008262164,0.00074038736,0.000045321936,0.0007052824],"domain_scores_gemma":[0.9982746,0.00027934884,0.00026862338,0.00092596305,0.00018477744,0.00006666817],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006085354,0.0004746052,0.0008165724,0.0002964587,0.00045644684,0.00017779307,0.0005009816,0.0006073863,0.001634889],"category_scores_gemma":[0.00027510928,0.0004305729,0.00035726314,0.00057791563,0.00018512261,0.0002147343,0.000324157,0.0007171045,0.0021506753],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013732937,0.0010854987,0.041457236,0.00047533357,0.0015007763,0.000026437752,0.00025234968,0.000006667348,0.5962587,0.10756937,0.22667697,0.023317393],"study_design_scores_gemma":[0.0016969182,0.00020863157,0.02376991,0.00020094597,0.0002296524,0.00008112274,0.000026022699,0.000004947554,0.008134021,0.00040418332,0.96478534,0.0004582984],"about_ca_topic_score_codex":0.00034007695,"about_ca_topic_score_gemma":0.0001365882,"teacher_disagreement_score":0.7381084,"about_ca_system_score_codex":0.00017551461,"about_ca_system_score_gemma":0.00041445348,"threshold_uncertainty_score":0.9998146},"labels":[],"label_agreement":null},{"id":"W7131938458","doi":"","title":"Application of CE-ESI-MS and LC-ESI-Msn to profile glycoform expression during Haemophilus pathogenesis in the chinchilla model of experimental otitis media","year":2008,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chinchilla; Pathogenesis; Otitis; Haemophilus; Pasteurellaceae","score_opus":0.014220472345698414,"score_gpt":0.2322270911053531,"score_spread":0.21800661875965469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7131938458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983732,0.00021650284,0.0001289322,0.000060883325,0.00008819138,0.0003131148,0.000060066002,0.000013201915,0.0007458729],"genre_scores_gemma":[0.99925244,0.00008557555,0.00043145852,0.000013087613,0.000028155697,0.000098996876,0.0000362462,0.000008507008,0.000045507797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993971,0.000051916668,0.00023312718,0.00016259882,0.000023082966,0.00013217088],"domain_scores_gemma":[0.9996487,0.00003405595,0.00008415826,0.00019291858,0.000026453865,0.000013719294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008320187,0.00009742701,0.0001852728,0.000086043074,0.000120997654,0.0000027135632,0.00010518138,0.000104105384,0.000109668465],"category_scores_gemma":[0.00001485262,0.00007065639,0.00003550251,0.00010209937,0.0000671091,0.000060184113,0.00007015115,0.000066597684,0.0000066353323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011066699,0.00013726944,0.0037856344,0.000013925071,0.0000074695945,3.626881e-7,0.002442641,0.000019741834,0.9922461,0.00016858404,0.00009444034,0.0009731709],"study_design_scores_gemma":[0.0005973184,0.00008042631,0.080781505,0.000022138638,0.0000058484693,0.000052595744,0.00020944589,0.0000688588,0.91790193,0.00012211964,0.000081554914,0.00007623388],"about_ca_topic_score_codex":0.0001095835,"about_ca_topic_score_gemma":0.000021016967,"teacher_disagreement_score":0.07699587,"about_ca_system_score_codex":0.000013746425,"about_ca_system_score_gemma":0.000015645515,"threshold_uncertainty_score":0.28812838},"labels":[],"label_agreement":null},{"id":"W7132024912","doi":"","title":"Meningococcal carriage as a correlate of protection","year":2009,"lang":"en","type":"article","venue":"Bristol Research (University of Bristol)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Carriage; Herd immunity; Meningococcal disease; Transmission (telecommunications); Meningococcal vaccine; Epidemiology; Incidence (geometry); Population","score_opus":0.04454830171853944,"score_gpt":0.2925368735566579,"score_spread":0.24798857183811848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132024912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99222136,0.00033879848,0.000518555,0.000514744,0.00018574222,0.00036323006,0.000023538441,0.000041542284,0.0057924804],"genre_scores_gemma":[0.9935952,0.00006814002,0.00006445527,0.000003989983,0.00001691711,6.2030614e-7,0.000021193027,0.000005815425,0.006223664],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989316,0.00032494814,0.00016080785,0.00023744642,0.000060165672,0.00028502932],"domain_scores_gemma":[0.99908704,0.00006003561,0.0001395108,0.00026804022,0.00040629972,0.000039062386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005502382,0.00009352973,0.00027883577,0.00034765556,0.0003788631,0.00000735347,0.00026866858,0.00022606945,0.00071009476],"category_scores_gemma":[0.00013965128,0.00011114274,0.00011850895,0.00045444057,0.00034875632,0.00015360076,0.00009566855,0.00041727314,0.00022855552],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00097193976,0.0003229955,0.00040701905,0.000033343073,0.00009384449,0.000011593074,0.000865812,0.000004717919,0.9592587,0.0016754187,0.008054192,0.028300429],"study_design_scores_gemma":[0.010753558,0.009850635,0.17881462,0.00046080252,0.00022209194,0.00059950317,0.010876654,0.00017461428,0.14929925,0.004236128,0.63374776,0.00096436625],"about_ca_topic_score_codex":0.007072375,"about_ca_topic_score_gemma":0.00021274653,"teacher_disagreement_score":0.8099595,"about_ca_system_score_codex":0.00009078245,"about_ca_system_score_gemma":0.00013512542,"threshold_uncertainty_score":0.9995396},"labels":[],"label_agreement":null},{"id":"W7132043242","doi":"","title":"Conjugation of meningococcal lipooligosaccharides through their lipid A terminus conserves their inner epitopes and results ion conjugate vaccines having improved immunological properties","year":2003,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Epitope; Conjugate; Lipid A; Glycolipid; Antibody; Monoclonal antibody; N-terminus; Peptide","score_opus":0.024876697627645914,"score_gpt":0.2301675256796897,"score_spread":0.2052908280520438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132043242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959244,0.0014952989,0.00003456092,0.0004781378,0.000731831,0.00039962976,0.000063060674,0.00009455885,0.0007785215],"genre_scores_gemma":[0.9986481,0.0005482588,0.00022821833,0.000050361956,0.00006626184,0.00006366975,0.000041731106,0.000017638784,0.00033572703],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827886,0.00036094608,0.00065267785,0.00037177154,0.000015581649,0.00032014845],"domain_scores_gemma":[0.99896586,0.00023520844,0.00031053895,0.00028295149,0.00018538383,0.00002005478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004007515,0.00028220707,0.0004842534,0.00007983521,0.0002938042,0.000050649036,0.0001360517,0.00030291567,0.00016738957],"category_scores_gemma":[0.00046536318,0.0001785841,0.00008821081,0.00012112017,0.00029614795,0.00027631462,0.00009919717,0.0002359348,0.000011171388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060092006,0.00011409246,0.0014186649,0.000031535597,0.00014355007,4.753317e-7,0.0014965187,6.400338e-7,0.98982537,0.0013629579,0.00017382641,0.0048314636],"study_design_scores_gemma":[0.0021079006,0.0005365019,0.008485863,0.00011192954,0.00003734075,0.00015215893,0.00093326136,0.00001529208,0.9739555,0.0013301886,0.012087612,0.00024644873],"about_ca_topic_score_codex":0.00026602266,"about_ca_topic_score_gemma":0.000043730342,"teacher_disagreement_score":0.015869852,"about_ca_system_score_codex":0.000017066199,"about_ca_system_score_gemma":0.00005287121,"threshold_uncertainty_score":0.7282448},"labels":[],"label_agreement":null},{"id":"W7132049649","doi":"","title":"Highly conserved Neisseria meningitidis inner-core lipopolysaccharide epitope confers protection against experimental meningococcal bacteremia","year":2003,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Neisseria meningitidis; Epitope; Monoclonal antibody; Lipopolysaccharide; Meningococcal disease; Bacteremia; Neisseriaceae; In vitro","score_opus":0.028257397686031915,"score_gpt":0.25221908546082444,"score_spread":0.22396168777479253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132049649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99028313,0.0001741903,0.00009891194,0.00016524378,0.0021897915,0.00048494292,0.000021032874,0.0002123565,0.0063704127],"genre_scores_gemma":[0.9980259,0.000027692418,0.00032599163,0.000098423756,0.00009501271,0.00018821872,0.0000869721,0.000035894118,0.0011159279],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998514,0.0002148263,0.0003925883,0.00040952515,0.000020453634,0.00044863037],"domain_scores_gemma":[0.9993485,0.00004453107,0.00015628959,0.00030263947,0.00009171939,0.00005627961],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001975914,0.00029154558,0.00034288433,0.00012592314,0.00038890776,0.000062740975,0.0001418598,0.0003289023,0.0036892614],"category_scores_gemma":[0.0000935117,0.00027103996,0.00012588424,0.00014003775,0.00012677307,0.00020285645,0.00005124183,0.00033387914,0.00035282955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017412135,0.00014462453,0.0010817917,0.000010168034,0.0001177807,0.0000016920055,0.00020439542,0.0000011633999,0.98935723,0.005628312,0.0015148927,0.0017638443],"study_design_scores_gemma":[0.0016251173,0.00027131868,0.0005569266,0.000034239743,0.000025845828,0.00009676294,0.00028965576,0.0000046434384,0.92950004,0.00019523881,0.067095414,0.00030481027],"about_ca_topic_score_codex":0.00017614686,"about_ca_topic_score_gemma":0.000036541696,"teacher_disagreement_score":0.065580525,"about_ca_system_score_codex":0.00009666429,"about_ca_system_score_gemma":0.00009177053,"threshold_uncertainty_score":0.9999742},"labels":[],"label_agreement":null},{"id":"W7132074505","doi":"","title":"Structural elucidation of lipopolysaccharide core oligosaccharides from lic1 and lic1/lic2 mutants of Haemophilus influenzae type b strain Eagan","year":2008,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Heptose; Mutant; Haemophilus influenzae; Gene; Locus (genetics); Strain (injury); Oligosaccharide; Lipid A; Escherichia coli","score_opus":0.03546585580781934,"score_gpt":0.26239557733921287,"score_spread":0.22692972153139354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132074505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984455,0.00028128736,0.000007358182,0.00005801855,0.00054677326,0.0001314953,0.00032973883,0.00003324267,0.00016658693],"genre_scores_gemma":[0.9993234,0.00015039794,0.00018710997,0.00003254931,0.00007244392,0.00000314946,0.00013012525,0.00001242934,0.00008836598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918264,0.00004939721,0.00037007788,0.00020417101,0.000023052176,0.00017064706],"domain_scores_gemma":[0.99931794,0.000081241495,0.0002162444,0.000225251,0.00013545902,0.000023883822],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006669504,0.00014675199,0.00033160954,0.00010317411,0.000119299475,0.000005520314,0.00011551532,0.00020579764,0.0011344429],"category_scores_gemma":[0.00009748768,0.00012865034,0.000049545604,0.00011823409,0.00024198592,0.000129801,0.00006518952,0.00014299442,0.000019745135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001553149,0.000029812572,0.024845453,0.000012480238,0.00010817685,0.0000010660076,0.00068766734,0.0000020871685,0.9698138,0.0005792616,0.00022006227,0.0035447888],"study_design_scores_gemma":[0.0009569734,0.000261083,0.24405307,0.000038711914,0.000051826446,0.00009716167,0.00014038543,0.00001778533,0.7519438,0.0017820476,0.0004946211,0.00016252173],"about_ca_topic_score_codex":0.0010074555,"about_ca_topic_score_gemma":0.000108939355,"teacher_disagreement_score":0.21920761,"about_ca_system_score_codex":0.000010880584,"about_ca_system_score_gemma":0.000050665665,"threshold_uncertainty_score":0.9997786},"labels":[],"label_agreement":null},{"id":"W7132177476","doi":"","title":"Learning and behavioral problems and quality of life of children after bacterial meningitis:Vigilance is needed","year":2003,"lang":"","type":"article","venue":"Pure Amsterdam UMC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Psychosocial; Cohort; Quality of life (healthcare); Cognition; Disease; Incidence (geometry); Perception; Competence (human resources)","score_opus":0.02052268160719172,"score_gpt":0.2710300891577733,"score_spread":0.2505074075505816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132177476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918717,0.0063650147,0.000012543076,0.000090527334,0.00081359193,0.00046950686,0.00018650574,0.000021381822,0.00016923646],"genre_scores_gemma":[0.9982332,0.0008731198,0.00006809668,0.000025285255,0.00008521153,0.000032348693,0.000043822554,0.000029389063,0.00060950476],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974457,0.0006215898,0.0009850471,0.0004954865,0.000037929414,0.0004142262],"domain_scores_gemma":[0.9987814,0.00008618142,0.00063986,0.00026129175,0.00015223658,0.000079039106],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043973455,0.00036599278,0.00094213657,0.00012686386,0.00019946073,0.00006364334,0.00009648618,0.00050838897,0.00162277],"category_scores_gemma":[0.00008803091,0.00035441207,0.00013526417,0.00015580097,0.00043962148,0.00022473127,0.00015270458,0.0003921792,0.0000072575417],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072938856,0.00027753494,0.6032888,0.00027498757,0.00028657774,2.6245812e-7,0.0022464767,4.3752294e-7,0.391332,0.000120568395,0.00006154355,0.0013813761],"study_design_scores_gemma":[0.010098941,0.0034109033,0.85012764,0.00056806917,0.0006655997,0.00024331895,0.0010320154,0.0000015925654,0.12271762,0.00011253143,0.009916401,0.00110539],"about_ca_topic_score_codex":0.0007776377,"about_ca_topic_score_gemma":0.00009336674,"teacher_disagreement_score":0.26861438,"about_ca_system_score_codex":0.000012766545,"about_ca_system_score_gemma":0.00005981078,"threshold_uncertainty_score":0.9998908},"labels":[],"label_agreement":null},{"id":"W7132192177","doi":"","title":"Phosphorylation of the lipid A region of meningococcal lipopolysaccharide: identification of a phosphoethanolamine transferase.","year":2003,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Phosphorylation; Identification (biology); Lipid A; Lipid metabolism","score_opus":0.013716269418309338,"score_gpt":0.23008749519110788,"score_spread":0.21637122577279855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132192177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752975,0.00015508113,0.00072999933,0.00008307942,0.00061841053,0.0002002822,0.000015377635,0.000010490708,0.00065755215],"genre_scores_gemma":[0.9994341,0.000055946068,0.0000360843,0.0000042856936,0.000011008919,0.000013378874,0.000008742999,0.0000069881708,0.0004294241],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992062,0.00012137247,0.00044015475,0.00011743726,0.000020061452,0.000094776326],"domain_scores_gemma":[0.9992898,0.000051057803,0.00026501235,0.00025452717,0.00013334016,0.000006237206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020333532,0.000079673046,0.00019877839,0.00005662148,0.00005228755,0.0000022076936,0.000102392136,0.00012818673,0.00038618833],"category_scores_gemma":[0.00010000441,0.000059388043,0.00010699082,0.00018012195,0.00011180796,0.00005464782,0.000011770507,0.000086887085,0.000003858264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008236604,0.00013165848,0.0030128222,0.0000277427,0.000049924936,2.364669e-8,0.0003192254,0.0000026079456,0.98388505,0.010549489,0.00015617235,0.0017829228],"study_design_scores_gemma":[0.0005876696,0.000089952344,0.009348962,0.000032024236,0.000048732807,0.0000134237425,0.000064661195,0.0000043990103,0.9879626,0.0005648307,0.001231367,0.00005136823],"about_ca_topic_score_codex":0.000077634504,"about_ca_topic_score_gemma":0.000012769842,"teacher_disagreement_score":0.009984658,"about_ca_system_score_codex":0.000010797021,"about_ca_system_score_gemma":0.00003790412,"threshold_uncertainty_score":0.42284915},"labels":[],"label_agreement":null},{"id":"W7132345499","doi":"","title":"Novel globoside-like oligosaccharide expression patterns in nontypeable Haemophilus influenzae lipopolysaccharide","year":2007,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Heptose; Oligosaccharide; Lipopolysaccharide; Haemophilus influenzae; Strain (injury); Carbohydrate conformation; Lipid A; Phosphocholine; Tandem mass spectrometry","score_opus":0.0184935323834414,"score_gpt":0.26042354512768834,"score_spread":0.24193001274424694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132345499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932215,0.00015479146,0.0018275221,0.00013461447,0.0020029964,0.00020774812,0.00004142396,0.00011081948,0.0022985467],"genre_scores_gemma":[0.99820846,0.000046705212,0.00040156965,0.00029839444,0.00014256692,0.00002077065,0.000044060514,0.000024213597,0.0008132429],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985581,0.00004411922,0.00045433527,0.00035281404,0.00002796153,0.0005626658],"domain_scores_gemma":[0.99932444,0.00009878325,0.00011800911,0.0003580446,0.00005610453,0.000044628705],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039055038,0.00022078422,0.0002953514,0.00024089297,0.00016164087,0.000028184308,0.00022332305,0.00033008936,0.002374875],"category_scores_gemma":[0.000049848393,0.00019877509,0.00008322007,0.00014664499,0.000046421752,0.00021277266,0.00014554667,0.00035411055,0.0004900043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015786564,0.00018284559,0.057957437,0.000014050731,0.000023472769,0.000005443878,0.00015430365,0.0000059132058,0.9374492,0.0004794371,0.0013052179,0.0022648023],"study_design_scores_gemma":[0.0019451542,0.00009547253,0.114244044,0.00011162511,0.000017726756,0.0001270173,0.00009649512,0.0000042223505,0.862722,0.00035301197,0.019973371,0.00030986127],"about_ca_topic_score_codex":0.001433626,"about_ca_topic_score_gemma":0.0013185231,"teacher_disagreement_score":0.07472721,"about_ca_system_score_codex":0.000075822245,"about_ca_system_score_gemma":0.000034945315,"threshold_uncertainty_score":0.99853706},"labels":[],"label_agreement":null},{"id":"W7132351179","doi":"","title":"Structural characterization of Haemophilus parainfluenzae lipooligosaccharide and elucidation of its role in adherence using an outer core mutant","year":2008,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus parainfluenzae; Mutant; Haemophilus; Core (optical fiber); Mutation; Pasteurellaceae","score_opus":0.043960988530232316,"score_gpt":0.272059810865282,"score_spread":0.22809882233504972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132351179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99954224,0.00004619101,0.000017155531,0.00001003738,0.00018013651,0.000127895,0.000042265936,0.000009651005,0.000024455025],"genre_scores_gemma":[0.9997509,0.000051240902,0.000059967817,0.0000105820445,0.000021048889,0.0000033876202,0.00008140779,0.0000054334732,0.0000160065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994549,0.000046680772,0.00025701424,0.00012643865,0.000011696292,0.00010326543],"domain_scores_gemma":[0.9996472,0.000012878924,0.00015351192,0.00010109145,0.00007501144,0.000010293443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005590215,0.00007889412,0.0001814999,0.000089064,0.00005583418,0.00000326212,0.000049568524,0.00010637883,0.00020284687],"category_scores_gemma":[0.00002007537,0.00007137891,0.000017876904,0.00009336187,0.00005927322,0.00020516696,0.000025519079,0.000067900655,0.0000023837983],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008270859,0.000029301471,0.030087817,0.000014350594,0.000011641497,5.8798724e-7,0.0006128312,0.000006141801,0.9667579,0.0001163577,6.9211904e-7,0.0022796795],"study_design_scores_gemma":[0.00045512657,0.00010120921,0.4080633,0.000028656274,0.000008640364,0.00008436817,0.00002815654,0.00030825264,0.59070915,0.00011441171,0.000034094737,0.000064642525],"about_ca_topic_score_codex":0.0001383929,"about_ca_topic_score_gemma":0.000032067815,"teacher_disagreement_score":0.37797546,"about_ca_system_score_codex":0.000007757209,"about_ca_system_score_gemma":0.000025003392,"threshold_uncertainty_score":0.29107478},"labels":[],"label_agreement":null},{"id":"W7132361623","doi":"","title":"Structure of extended lipopolysaccharide glycoforms contianing two globotriose units in the Haemophilus influenzae serotype b strain, RM7004.","year":2003,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Serotype; Lipopolysaccharide; Bacteria; Strain (injury)","score_opus":0.01804532606845804,"score_gpt":0.2597003928721607,"score_spread":0.24165506680370263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132361623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99637145,0.00028157636,0.0000286307,0.00011485621,0.00063678325,0.0002493754,0.0000816129,0.00002884309,0.0022068764],"genre_scores_gemma":[0.9994808,0.000020873187,0.00010514009,0.00018122622,0.000036462137,0.000006962752,0.000031237687,0.000011363615,0.0001259526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893105,0.00022474158,0.00033462266,0.0001861861,0.000024760511,0.0002986363],"domain_scores_gemma":[0.9993054,0.0001122545,0.00013625239,0.0003070256,0.0001232515,0.000015803227],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022811884,0.0001671554,0.00026761906,0.00010952893,0.00013388378,0.000021123155,0.00021669341,0.00019002077,0.0012442447],"category_scores_gemma":[0.00027400203,0.000112229834,0.000051412637,0.00034998043,0.000093722774,0.00012304336,0.00003184314,0.0003368536,0.000025398358],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009056111,0.000054482745,0.0038653265,0.000010792699,0.000060347364,0.0000024004544,0.00055903185,0.000018013165,0.9657764,0.027030054,0.0003214448,0.0022111407],"study_design_scores_gemma":[0.007422344,0.00071564596,0.07922143,0.00016412672,0.00014999519,0.000771769,0.002772471,0.000009883913,0.8449938,0.034041446,0.029026188,0.0007108593],"about_ca_topic_score_codex":0.00025358147,"about_ca_topic_score_gemma":0.0006387788,"teacher_disagreement_score":0.120782554,"about_ca_system_score_codex":0.000020795886,"about_ca_system_score_gemma":0.0000920356,"threshold_uncertainty_score":0.9996688},"labels":[],"label_agreement":null},{"id":"W7132501075","doi":"","title":"Profiling structural elements of short-chain lipopolysaccharide of non-typeable Haemophilus influenzae","year":2008,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Lipopolysaccharide; Bacteria; Profiling (computer programming); Virulence","score_opus":0.022021477171599843,"score_gpt":0.2665588313121602,"score_spread":0.24453735414056033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132501075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99776244,0.00011079941,0.000030625582,0.000020462447,0.00052796147,0.00016256719,0.000034261408,0.0000214544,0.001329412],"genre_scores_gemma":[0.9988628,0.00003262298,0.0006799241,0.000014872307,0.000041132564,0.0000072783173,0.00003193024,0.000009933727,0.00031949623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99922884,0.000037452104,0.00037933493,0.00014186722,0.000018292103,0.0001941958],"domain_scores_gemma":[0.9995339,0.000026511456,0.00012143183,0.00020075815,0.00010388949,0.000013545304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009455033,0.00010911111,0.00026751347,0.000075234704,0.00010957685,0.0000021675182,0.000117152,0.00012369774,0.0008068873],"category_scores_gemma":[0.00003382023,0.00009390526,0.00007096433,0.00009143726,0.000103475184,0.00007618221,0.000062654086,0.00011917428,0.000021735566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007972801,0.000035261586,0.059787188,0.000021154858,0.00008746227,6.4325684e-7,0.0001026868,0.0000074938944,0.9380142,0.00045414353,0.0003057106,0.0011043313],"study_design_scores_gemma":[0.00057240936,0.00016177999,0.02079713,0.000020274436,0.000023459992,0.000051341103,0.00004431542,0.000024437146,0.97732455,0.0002714189,0.0006097518,0.000099135636],"about_ca_topic_score_codex":0.00017462828,"about_ca_topic_score_gemma":0.000017372317,"teacher_disagreement_score":0.03931035,"about_ca_system_score_codex":0.000012343761,"about_ca_system_score_gemma":0.00004511429,"threshold_uncertainty_score":0.883485},"labels":[],"label_agreement":null},{"id":"W7132509461","doi":"","title":"Digalactoside expression in the lipopolysaccharide of Haemophilus influenzae and its role in intracellular survival.","year":2005,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipopolysaccharide; Intracellular; Haemophilus influenzae; Bacteria; Intracellular parasite","score_opus":0.013513464773424022,"score_gpt":0.2413060730666549,"score_spread":0.2277926082932309,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132509461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969291,0.001361943,0.0000038464627,0.00049108866,0.00014378545,0.00013579833,0.000005514587,0.000010608416,0.000918285],"genre_scores_gemma":[0.9996333,0.00015045116,0.000025544921,0.000046506182,0.000040957395,0.000015572006,0.000005772238,0.000005852523,0.00007601051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993042,0.00015604864,0.00023651161,0.00013100126,0.000013624187,0.00015863252],"domain_scores_gemma":[0.9996656,0.000104894956,0.00006047111,0.00014108965,0.000019711184,0.000008211975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027265894,0.000087954584,0.00017178363,0.00009842222,0.000043310607,0.000008513722,0.000109168635,0.00013243349,0.0002985715],"category_scores_gemma":[0.000059486138,0.00006159347,0.000023807508,0.000091639486,0.000033324523,0.0001132441,0.000051764684,0.00019898807,0.000023799423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057779493,0.00009644432,0.011948862,0.000006542966,0.000006092354,5.6916235e-7,0.00063786295,0.000007203027,0.9830836,0.000883516,0.00008002442,0.0031915265],"study_design_scores_gemma":[0.0008176616,0.000048674792,0.04531426,0.00004124366,0.000006423288,0.000016215648,0.00022609494,0.00001656289,0.94486016,0.00057958096,0.007989664,0.00008343396],"about_ca_topic_score_codex":0.0001435437,"about_ca_topic_score_gemma":0.00033426774,"teacher_disagreement_score":0.038223393,"about_ca_system_score_codex":0.000010737507,"about_ca_system_score_gemma":0.000012849852,"threshold_uncertainty_score":0.32691485},"labels":[],"label_agreement":null},{"id":"W7132569624","doi":"","title":"Complex O-acetylation in non-typable Haemophilus influenzae lipopolysaccharide: evidence for a novel site of O-aceylation.","year":2005,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Haemophilus influenzae; Bacteria; Transmission (telecommunications); Antibiotics","score_opus":0.06288307151251735,"score_gpt":0.3167098355136642,"score_spread":0.2538267640011469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132569624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99354565,0.00017002836,0.0041973493,0.0008831458,0.00032455457,0.0004304254,0.00004774076,0.000032519987,0.00036858572],"genre_scores_gemma":[0.9948029,0.000026208581,0.0043922453,0.000113033435,0.00010391752,0.000053252956,0.000057171794,0.000011551695,0.00043970344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991971,0.000027927812,0.0003659738,0.00019034844,0.000015014904,0.00020360574],"domain_scores_gemma":[0.9993174,0.00017279,0.0001485645,0.00019019633,0.00015820564,0.000012821115],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021200042,0.00011330655,0.00023531934,0.00014160993,0.00009442547,0.00001182093,0.00008636403,0.00015203262,0.0009277687],"category_scores_gemma":[0.00017106468,0.000110565845,0.00006559795,0.00015145987,0.00004841088,0.00028978396,0.000039699004,0.000098641955,0.00008685032],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019936383,0.00010557506,0.00461445,0.000025786921,0.000022821516,3.1503113e-8,0.00019203614,0.0003068874,0.9885538,0.0011658078,0.0015396082,0.0032737863],"study_design_scores_gemma":[0.006427525,0.0004860621,0.18566597,0.00028663877,0.00007893376,0.000035610552,0.00009130019,0.0037033567,0.7323333,0.0010894255,0.069294654,0.00050722517],"about_ca_topic_score_codex":0.00022269448,"about_ca_topic_score_gemma":0.00029861176,"teacher_disagreement_score":0.25622055,"about_ca_system_score_codex":0.000045186716,"about_ca_system_score_gemma":0.000038035996,"threshold_uncertainty_score":0.9999855},"labels":[],"label_agreement":null},{"id":"W7132646981","doi":"","title":"An alternate pattern for globoside oligosaccharide expression in Haemophilus influenzae lipopolysaccharide: Structural diversity in non-typeable strain 1124.","year":2005,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Strain (injury); Haemophilus influenzae; Bacteria; Oligosaccharide; Haemophilus; Glycolipid","score_opus":0.02055568398211896,"score_gpt":0.27775429020151676,"score_spread":0.25719860621939783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132646981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979668,0.000051826228,0.00024751888,0.00030734026,0.0007001064,0.00036217377,0.00016974246,0.00004879477,0.00014566226],"genre_scores_gemma":[0.99906355,0.000018699744,0.00030643636,0.00019337937,0.00016518253,0.000030620846,0.0000985912,0.000015843823,0.000107666965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876857,0.000084852705,0.00032889008,0.00035505023,0.000022961638,0.0004396823],"domain_scores_gemma":[0.99949694,0.00005002051,0.00010085251,0.00027146772,0.00004328267,0.000037452533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002079829,0.00019777028,0.00028563346,0.00018826846,0.00021978933,0.000032247994,0.0002893688,0.00023231238,0.0007837672],"category_scores_gemma":[0.0000271706,0.00018403598,0.00006490777,0.00009369591,0.000042162457,0.0004433175,0.00019499946,0.00025795604,0.00005331066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016677339,0.0000827489,0.078232795,0.000012817254,0.000015978654,0.0000025138609,0.0004434857,0.00015998747,0.89794296,0.00009606631,0.00024932373,0.022594536],"study_design_scores_gemma":[0.0067032212,0.000371145,0.3435211,0.0001400534,0.000031127332,0.00006087903,0.0002374539,0.0011578618,0.64034224,0.0046993475,0.0020931736,0.0006423815],"about_ca_topic_score_codex":0.0020668535,"about_ca_topic_score_gemma":0.0034958508,"teacher_disagreement_score":0.2652883,"about_ca_system_score_codex":0.00010113537,"about_ca_system_score_gemma":0.000027517299,"threshold_uncertainty_score":0.8581701},"labels":[],"label_agreement":null},{"id":"W7132688327","doi":"","title":"Identification of sulfoquinovosyl diacylglycerol as a major polar lipid in Marinococcus halophilus and Salinicoccus hispanicus and substitution with phosphatidylglycerol.","year":2006,"lang":"en","type":"article","venue":"NPARC","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Substitution (logic); Identification (biology); Diacylglycerol kinase; Polar","score_opus":0.0050414822112927185,"score_gpt":0.21142251829716885,"score_spread":0.20638103608587613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132688327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974724,0.0010242619,0.000051864197,0.0002051768,0.0002990743,0.00032111953,0.000036297635,0.000035701127,0.0005541046],"genre_scores_gemma":[0.999257,0.00017425975,0.00005224174,0.000016130325,0.000047622423,0.000036001667,0.00007009416,0.000012904808,0.00033374433],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989785,0.00008186276,0.00040893035,0.0002951621,0.000022155973,0.00021339001],"domain_scores_gemma":[0.9994454,0.00006744438,0.00019024844,0.00020024911,0.00007762221,0.000019030338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019784035,0.00015934042,0.0002770159,0.000157471,0.00010962302,0.000029358565,0.000068502755,0.00019083905,0.00017789914],"category_scores_gemma":[0.000036165253,0.000135639,0.000033411176,0.00018263303,0.00018947702,0.00017740931,0.00004711172,0.00014776246,0.000026416707],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055158517,0.0001559271,0.12024654,0.000033249078,0.000044675366,0.0000019183294,0.00008125241,0.000002415266,0.8676485,0.008480836,0.00010376375,0.0026493687],"study_design_scores_gemma":[0.0043509463,0.00041477624,0.75172174,0.00005664493,0.00010302629,0.0001562326,0.00005698637,0.000012559562,0.23702215,0.0020361098,0.0038085317,0.00026028315],"about_ca_topic_score_codex":0.0020038083,"about_ca_topic_score_gemma":0.0008833582,"teacher_disagreement_score":0.6314752,"about_ca_system_score_codex":0.000028207724,"about_ca_system_score_gemma":0.00004112893,"threshold_uncertainty_score":0.5531198},"labels":[],"label_agreement":null},{"id":"W7134575401","doi":"","title":"PILI ON MENINGOCOCCI FROM PRIMARY CULTURES OF NASOPHARYNGEAL CARRIERS AND CEREBROSPINAL FLUID OF PATIENTS WITH ACUTE DISEASE*","year":2013,"lang":"en","type":"article","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pilus; Neisseria meningitidis; Virulence; Population; Fimbria; Neisseria; Neisseria gonorrhoeae; Meningococcal disease; Strain (injury)","score_opus":0.004234891348272688,"score_gpt":0.20399157496965734,"score_spread":0.19975668362138466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7134575401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986712,0.00017863938,0.000005523662,0.000053178937,0.00014348941,0.00022184757,0.00023050122,0.000016546239,0.00047908077],"genre_scores_gemma":[0.9991661,0.000024398198,0.00008125356,0.000058507234,0.0000148601075,0.000015884636,0.00028207296,0.0000067126193,0.00035024132],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995371,0.000032641274,0.00015540438,0.00015126026,0.000014849766,0.0001087268],"domain_scores_gemma":[0.99966115,0.000026793357,0.000079686564,0.000113307484,0.00009166126,0.00002743178],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000014263924,0.00010859185,0.00020567766,0.00003596505,0.000059664922,0.0000062950094,0.000056011395,0.00007005537,0.0011728324],"category_scores_gemma":[0.0000064060596,0.000067951645,0.000032725944,0.000040368086,0.000106077314,0.00009482918,0.000037363683,0.000060931725,0.000012761289],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001422554,0.00029275412,0.29698247,0.000025943784,0.0005939961,2.7346044e-7,0.00018998564,9.073669e-7,0.6935052,0.00032203682,0.0055278195,0.0011360536],"study_design_scores_gemma":[0.0015072296,0.0006413654,0.9600087,0.00002196341,0.00008500275,6.494622e-7,0.00003300372,4.0915398e-7,0.036532935,0.000052279654,0.0010283411,0.00008813036],"about_ca_topic_score_codex":0.0007549831,"about_ca_topic_score_gemma":0.000012327236,"teacher_disagreement_score":0.6630262,"about_ca_system_score_codex":0.000008607719,"about_ca_system_score_gemma":0.000021906162,"threshold_uncertainty_score":0.99974024},"labels":[],"label_agreement":null},{"id":"W7135908467","doi":"","title":"Updated post-licensure surveillance of meningococcal C conjugate vaccine in England and Wales: effectiveness, validation of serological correlate of protection and modelling predictions of the duration of herd immunity","year":2010,"lang":"en","type":"article","venue":"Bristol Research (University of Bristol)","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Herd immunity; Vaccination; Meningococcal vaccine; Meningococcal disease; Herd; Conjugate vaccine; Carriage; Vaccine efficacy","score_opus":0.022972118330152287,"score_gpt":0.24863157912953962,"score_spread":0.22565946079938734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7135908467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983939,0.00012680543,0.00069806754,0.00006371876,0.00007318723,0.0004901679,0.00013055533,0.000005625078,0.000017993598],"genre_scores_gemma":[0.99974483,0.00013348112,0.000049188555,1.8912277e-7,0.0000032187843,0.0000011497283,0.00004554725,0.0000039697525,0.000018443257],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99855477,0.0008264892,0.00030671695,0.00014807498,0.000055090262,0.000108869885],"domain_scores_gemma":[0.9983041,0.0002535861,0.00040754763,0.00019091745,0.00082917645,0.000014641731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001312003,0.00007576021,0.0003583742,0.00021356391,0.0001364784,0.0000020165915,0.0001247271,0.0002265616,0.000026004405],"category_scores_gemma":[0.00021501831,0.00007007087,0.00005038723,0.00036333132,0.00051987026,0.00012112924,0.00012647001,0.00038454236,2.0372832e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018853132,0.00019824089,0.102202766,0.00022392355,0.00007331209,1.9600282e-7,0.000721108,0.00036062542,0.8937858,0.000088746376,0.000004731471,0.00045527515],"study_design_scores_gemma":[0.002680585,0.000775598,0.84973717,0.00013038909,0.00003671815,0.000019862759,0.00058024283,0.00165199,0.14410788,0.00010338409,0.00011016178,0.00006600831],"about_ca_topic_score_codex":0.011424196,"about_ca_topic_score_gemma":0.001756728,"teacher_disagreement_score":0.7496779,"about_ca_system_score_codex":0.000018559558,"about_ca_system_score_gemma":0.00006795003,"threshold_uncertainty_score":0.9951588},"labels":[],"label_agreement":null},{"id":"W7136044182","doi":"10.6084/m9.figshare.5074111.v1","title":"Additional file 1: Table S1. of Epidemiology of pertussis in Alberta, Canada 2004â 2015","year":2017,"lang":"","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Epidemiology; Whooping cough; Pertussis vaccine; Bordetella pertussis","score_opus":0.035460921611074656,"score_gpt":0.26966892147071014,"score_spread":0.23420799985963547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136044182","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008456902,0.0010596153,3.415514e-8,0.00042807692,0.00052636064,0.00018273557,0.9928891,0.0000034610214,0.0040649194],"genre_scores_gemma":[0.055147547,0.000039545997,0.000025922232,0.00007670307,0.00013620713,0.0002767549,0.92728233,0.000017844106,0.016997114],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980158,0.00026335396,0.00082908024,0.00036458203,0.000021541726,0.0005056042],"domain_scores_gemma":[0.9932878,0.0044678953,0.0011615318,0.0007149869,0.00031503872,0.00005275417],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008260433,0.00025143783,0.0008483174,0.00010392931,0.00030489083,0.0000068032555,0.000496369,0.00055345584,0.99860954],"category_scores_gemma":[0.02215369,0.00024219367,0.00014379472,0.000091453025,0.00008640179,0.00017753702,0.00027530672,0.00033161952,0.0016340473],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006922551,0.00012658448,0.0012966262,0.00015079965,0.0001392926,0.0000017875483,0.000019073366,0.000007843409,0.00018230334,0.000024234341,0.99721956,0.0007626951],"study_design_scores_gemma":[0.0005004473,0.000113973794,0.10967225,0.002246898,0.000016751503,0.000023470484,0.000023081535,0.000017687324,0.000661873,0.000029709265,0.8864991,0.00019477331],"about_ca_topic_score_codex":0.75923526,"about_ca_topic_score_gemma":0.8801068,"teacher_disagreement_score":0.99697554,"about_ca_system_score_codex":0.00009168113,"about_ca_system_score_gemma":0.0016534684,"threshold_uncertainty_score":0.9991433},"labels":[],"label_agreement":null},{"id":"W7136048770","doi":"10.6084/m9.figshare.5202661","title":"Additional file 1: Table S1. of How well do ICD-9 physician claim diagnostic codes identify confirmed pertussis cases in Alberta, Canada? A Canadian Immunization Research Network (CIRN) Study","year":2017,"lang":"","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Immunization; Diagnosis code; Pertussis vaccine; MEDLINE","score_opus":0.041579158529685224,"score_gpt":0.2965401353710569,"score_spread":0.25496097684137164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136048770","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022810986,0.0005709505,2.3556698e-8,0.00046707926,0.00065678015,0.001221176,0.97166574,0.000009267275,0.002597991],"genre_scores_gemma":[0.5683587,0.00003072429,0.0000012370101,0.00003801998,0.0002555437,0.00079236063,0.42674544,0.000028999917,0.0037489878],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99652135,0.0008917155,0.0005562241,0.0006331139,0.000116044816,0.0012815568],"domain_scores_gemma":[0.9884003,0.008779843,0.00054889,0.0010508904,0.0010515639,0.00016851853],"candidate_categories":["metaresearch","metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020329883,0.0003988517,0.0007012351,0.00032398163,0.0030994746,0.00044859812,0.0008463635,0.00048085675,0.96486217],"category_scores_gemma":[0.017164089,0.00042626885,0.00010933322,0.00053099025,0.00013060209,0.00045292472,0.00040474613,0.0008177599,0.0016083524],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066274515,0.000352539,0.0033921984,0.0000995796,0.00027394842,0.0000675546,0.00018483684,0.000037378853,0.000062624946,0.000014044784,0.99476194,0.00068708655],"study_design_scores_gemma":[0.0007542848,0.00030247102,0.32835403,0.0032533268,0.0000413697,0.000025155816,0.0011019504,0.00002741622,0.00011396696,0.00001254805,0.66566724,0.00034625395],"about_ca_topic_score_codex":0.9844549,"about_ca_topic_score_gemma":0.9993256,"teacher_disagreement_score":0.96325386,"about_ca_system_score_codex":0.00048822278,"about_ca_system_score_gemma":0.004972517,"threshold_uncertainty_score":0.9998189},"labels":[],"label_agreement":null},{"id":"W7136062797","doi":"10.6084/m9.figshare.5202661.v1","title":"Additional file 1: Table S1. of How well do ICD-9 physician claim diagnostic codes identify confirmed pertussis cases in Alberta, Canada? A Canadian Immunization Research Network (CIRN) Study","year":2017,"lang":"","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Immunization; Diagnosis code; Pertussis vaccine; MEDLINE","score_opus":0.041579158529685224,"score_gpt":0.2965401353710569,"score_spread":0.25496097684137164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136062797","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022810986,0.0005709505,2.3556698e-8,0.00046707926,0.00065678015,0.001221176,0.97166574,0.000009267275,0.002597991],"genre_scores_gemma":[0.5683587,0.00003072429,0.0000012370101,0.00003801998,0.0002555437,0.00079236063,0.42674544,0.000028999917,0.0037489878],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99652135,0.0008917155,0.0005562241,0.0006331139,0.000116044816,0.0012815568],"domain_scores_gemma":[0.9884003,0.008779843,0.00054889,0.0010508904,0.0010515639,0.00016851853],"candidate_categories":["metaresearch","metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020329883,0.0003988517,0.0007012351,0.00032398163,0.0030994746,0.00044859812,0.0008463635,0.00048085675,0.96486217],"category_scores_gemma":[0.017164089,0.00042626885,0.00010933322,0.00053099025,0.00013060209,0.00045292472,0.00040474613,0.0008177599,0.0016083524],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066274515,0.000352539,0.0033921984,0.0000995796,0.00027394842,0.0000675546,0.00018483684,0.000037378853,0.000062624946,0.000014044784,0.99476194,0.00068708655],"study_design_scores_gemma":[0.0007542848,0.00030247102,0.32835403,0.0032533268,0.0000413697,0.000025155816,0.0011019504,0.00002741622,0.00011396696,0.00001254805,0.66566724,0.00034625395],"about_ca_topic_score_codex":0.9844549,"about_ca_topic_score_gemma":0.9993256,"teacher_disagreement_score":0.96325386,"about_ca_system_score_codex":0.00048822278,"about_ca_system_score_gemma":0.004972517,"threshold_uncertainty_score":0.9998189},"labels":[],"label_agreement":null},{"id":"W7136075800","doi":"10.6084/m9.figshare.5074111","title":"Additional file 1: Table S1. of Epidemiology of pertussis in Alberta, Canada 2004â 2015","year":2017,"lang":"","type":"article","venue":"Figshare","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Table (database); Epidemiology; Whooping cough; Pertussis vaccine; Bordetella pertussis","score_opus":0.035460921611074656,"score_gpt":0.26966892147071014,"score_spread":0.23420799985963547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136075800","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008456902,0.0010596153,3.415514e-8,0.00042807692,0.00052636064,0.00018273557,0.9928891,0.0000034610214,0.0040649194],"genre_scores_gemma":[0.055147547,0.000039545997,0.000025922232,0.00007670307,0.00013620713,0.0002767549,0.92728233,0.000017844106,0.016997114],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980158,0.00026335396,0.00082908024,0.00036458203,0.000021541726,0.0005056042],"domain_scores_gemma":[0.9932878,0.0044678953,0.0011615318,0.0007149869,0.00031503872,0.00005275417],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008260433,0.00025143783,0.0008483174,0.00010392931,0.00030489083,0.0000068032555,0.000496369,0.00055345584,0.99860954],"category_scores_gemma":[0.02215369,0.00024219367,0.00014379472,0.000091453025,0.00008640179,0.00017753702,0.00027530672,0.00033161952,0.0016340473],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006922551,0.00012658448,0.0012966262,0.00015079965,0.0001392926,0.0000017875483,0.000019073366,0.000007843409,0.00018230334,0.000024234341,0.99721956,0.0007626951],"study_design_scores_gemma":[0.0005004473,0.000113973794,0.10967225,0.002246898,0.000016751503,0.000023470484,0.000023081535,0.000017687324,0.000661873,0.000029709265,0.8864991,0.00019477331],"about_ca_topic_score_codex":0.75923526,"about_ca_topic_score_gemma":0.8801068,"teacher_disagreement_score":0.99697554,"about_ca_system_score_codex":0.00009168113,"about_ca_system_score_gemma":0.0016534684,"threshold_uncertainty_score":0.9991433},"labels":[],"label_agreement":null},{"id":"W7160069155","doi":"10.33979/2024-2-1","title":"MODERN FEATURES OF PNEUMONIA IN NEWBORNS AND CHILDREN IN THE FIRST MONTHS OF LIFE IN THE OREL REGION","year":2024,"lang":"","type":"article","venue":"Innovations in medicine and pharmacy","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iron Ore Company (Canada)","funders":"","keywords":"Epidemiology; Incidence (geometry); Pneumonia; Disease; Whooping cough; Bordetella pertussis; Immunization","score_opus":0.032963928307167475,"score_gpt":0.323508423664505,"score_spread":0.2905444953573375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7160069155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9432887,0.02519799,0.000012338553,0.03020094,0.00035703508,0.00056096,0.000022387667,0.0000047967205,0.00035487494],"genre_scores_gemma":[0.98825294,0.010684129,0.000005125472,0.0008186523,0.00012072318,0.000045740166,0.000037425794,0.000008826447,0.000026414627],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99839854,0.0002770105,0.00084249617,0.0002458847,0.00003822319,0.00019783422],"domain_scores_gemma":[0.99905473,0.000532333,0.00013615187,0.00020769384,0.00006008643,0.000009021286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010107702,0.00018410926,0.00040288913,0.0008827668,0.0000789404,0.000016873417,0.00020297775,0.00014344625,0.00004482975],"category_scores_gemma":[0.00018983838,0.00011055624,0.000024950501,0.0021478438,0.0003464611,0.00014026953,0.00005541148,0.00081887544,5.1149647e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043804213,0.000667154,0.847606,0.0003711605,0.00015262215,0.000018544562,0.052131306,0.000051692095,0.03541971,0.012174216,0.008177509,0.04279203],"study_design_scores_gemma":[0.0037221755,0.00020456847,0.98003495,0.0010105493,0.000060778715,0.00015769944,0.0021059965,0.00025180986,0.0002592064,0.001827547,0.010229609,0.00013513825],"about_ca_topic_score_codex":0.008299275,"about_ca_topic_score_gemma":0.0041884696,"teacher_disagreement_score":0.1324289,"about_ca_system_score_codex":0.000016091588,"about_ca_system_score_gemma":0.00009046442,"threshold_uncertainty_score":0.99830455},"labels":[],"label_agreement":null},{"id":"W80846023","doi":"10.1007/978-3-642-59681-0_20","title":"Animal Model Experiences with Moxifloxacin","year":2000,"lang":"en","type":"book-chapter","venue":"","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Hospital; Hamilton General Hospital","funders":"","keywords":"Moxifloxacin; Medicine; Ciprofloxacin; Vancomycin; Sparfloxacin; Microbiology; Penicillin; Trovafloxacin; Staphylococcus aureus; Streptococcus pneumoniae; Antibiotics; Ofloxacin; Biology; Bacteria","score_opus":0.017129568291758476,"score_gpt":0.22101703147565863,"score_spread":0.20388746318390016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W80846023","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08308382,0.0005701898,0.00006164831,0.000054511194,0.00024453335,0.0001487061,0.00002826932,0.00013927973,0.915669],"genre_scores_gemma":[0.26150072,0.00011919139,0.000063603955,0.000051944226,0.000056553108,0.000023949928,0.000073967014,0.000027277947,0.7380828],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992954,0.000007868567,0.00018864404,0.00030540593,0.0000108869,0.00019177409],"domain_scores_gemma":[0.9996383,0.000013335276,0.00006643822,0.00022902404,0.00003721597,0.000015646669],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000025511468,0.00027208662,0.00030758342,0.00008681756,0.00013320746,0.000019720586,0.000117051124,0.00046871812,0.04029145],"category_scores_gemma":[9.3198634e-7,0.00018367863,0.00007803047,0.000013100736,0.00012893394,0.00007142337,0.000029370713,0.00023752108,0.0012398984],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003864599,0.00034095053,0.000057818856,0.000061636325,0.0019151652,0.000022927226,0.007062906,0.00012864966,0.18232155,0.674,0.10496858,0.025255216],"study_design_scores_gemma":[0.0011363685,0.0010990669,0.000021439375,0.00010111468,0.00015413806,0.00029264152,0.00046942712,0.00003466263,0.012456258,0.0024094451,0.9807755,0.0010499675],"about_ca_topic_score_codex":0.000049447524,"about_ca_topic_score_gemma":0.000060323637,"teacher_disagreement_score":0.87580687,"about_ca_system_score_codex":0.000014013659,"about_ca_system_score_gemma":0.000056760724,"threshold_uncertainty_score":0.99953777},"labels":[],"label_agreement":null},{"id":"W83588962","doi":"10.1385/1-59259-148-5:41","title":"Purification of Capsular Polysaccharide","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Neisseria meningitidis; Polysaccharide; Peptidoglycan; Microbiology; Cell wall; Chemistry; Biochemistry; Biology; Bacteria","score_opus":0.0418536263362248,"score_gpt":0.25803926069085115,"score_spread":0.21618563435462634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W83588962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94905454,0.0037898337,0.0001620566,0.0000076022125,0.0007363003,0.00017897792,0.000010859793,0.00005883123,0.04600101],"genre_scores_gemma":[0.99332803,0.000046886154,0.000040150706,0.000010382528,0.000017172322,0.00001978265,0.0000073153406,0.000007662408,0.006522611],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995061,0.000080787955,0.00017162928,0.0001170848,0.000007229468,0.00011714655],"domain_scores_gemma":[0.9996265,0.000015217152,0.00008018199,0.00022274257,0.00004740823,0.000007903207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000088666005,0.00007124452,0.00011957253,0.00004503142,0.00008330285,0.000007135142,0.00007325454,0.00009322927,0.00030755682],"category_scores_gemma":[0.00002029196,0.000064441396,0.00004450226,0.000009868739,0.000049683065,0.000027786371,0.000013178608,0.00007117067,0.000029332623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010466651,0.000032835967,0.00003270677,0.0000100006955,0.000050792394,1.347297e-7,0.00017348089,7.549525e-7,0.8751872,0.120413296,0.00059719424,0.0034911048],"study_design_scores_gemma":[0.00030512648,0.00003164271,0.00062877114,0.0000064119795,0.000024666726,0.000009332461,0.00001778787,2.4750753e-7,0.74052227,0.00031898287,0.2580706,0.000064194006],"about_ca_topic_score_codex":0.0003772724,"about_ca_topic_score_gemma":0.000019717534,"teacher_disagreement_score":0.25747338,"about_ca_system_score_codex":0.000005876607,"about_ca_system_score_gemma":0.00001236929,"threshold_uncertainty_score":0.33675316},"labels":[],"label_agreement":null},{"id":"W838157302","doi":"10.1371/journal.pgen.1005338","title":"Common Cell Shape Evolution of Two Nasopharyngeal Pathogens","year":2015,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Agence Nationale de la Recherche","keywords":"Biology; Neisseria meningitidis; Peptidoglycan; Locus (genetics); Most recent common ancestor; Genetics; Gene; Commensalism; Genome; Immune system; Evolutionary biology; Microbiology; Bacteria","score_opus":0.030780653243141044,"score_gpt":0.25399274809108846,"score_spread":0.2232120948479474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W838157302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99432635,0.0033380042,0.000027793443,0.000026008582,0.00070135825,0.00010221432,0.000049231596,0.000033328048,0.0013956989],"genre_scores_gemma":[0.9994353,0.00003927216,0.00012976237,0.000013251483,0.00007774007,0.000005774918,0.000050049137,0.0000108646,0.00023795805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945176,0.000081712365,0.0001887678,0.000115345676,0.000014183504,0.00014823826],"domain_scores_gemma":[0.9995693,0.00002291868,0.00007979175,0.00018461933,0.00012002902,0.000023340752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007022418,0.00008812824,0.00016377472,0.000050917195,0.00004704294,0.000004638548,0.0000933323,0.00011107855,0.0002186976],"category_scores_gemma":[0.000011622208,0.00008166698,0.000042591724,0.00008302676,0.000046530575,0.000024176079,0.000059202088,0.000087334454,0.00021960896],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033020286,0.00021602126,0.022576319,0.000010558642,0.000033342323,3.3482462e-7,0.00011273962,0.000022561035,0.9752901,0.00015779461,0.0010064708,0.000540707],"study_design_scores_gemma":[0.0015485919,0.00043882243,0.005284432,0.000010624565,0.00009738316,0.000018852501,0.00009246674,0.0002810233,0.9833119,0.0004493587,0.008322394,0.00014417758],"about_ca_topic_score_codex":0.00003951404,"about_ca_topic_score_gemma":0.000034285524,"teacher_disagreement_score":0.017291887,"about_ca_system_score_codex":0.000029418357,"about_ca_system_score_gemma":0.00004941223,"threshold_uncertainty_score":0.33302826},"labels":[],"label_agreement":null},{"id":"W912569641","doi":"10.1016/j.vaccine.2015.06.011","title":"Vaccination with a multicomponent meningococcal B vaccine in prevention of disease in adolescents and young adults","year":2015,"lang":"en","type":"review","venue":"Vaccine","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meningococcal disease; Vaccination; Outbreak; Meningococcal vaccine; Medicine; Epidemiology; Carriage; Public health; Disease; Environmental health; Young adult; Pediatrics; Immunology; Virology; Neisseria meningitidis; Gerontology; Immunization; Antibody; Biology","score_opus":0.02019096756472555,"score_gpt":0.29321030208259474,"score_spread":0.2730193345178692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W912569641","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21039332,0.7879163,0.0000093304525,0.000014852366,0.00031614405,0.0012841247,0.000033433324,0.00002419892,0.000008307769],"genre_scores_gemma":[0.2731551,0.72607946,0.000022966215,0.0000016533219,0.000042603922,0.00010983101,0.00044454343,0.000036702513,0.00010711793],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9980984,0.0003248861,0.0008299457,0.00044615575,0.000029255196,0.00027139572],"domain_scores_gemma":[0.9991003,0.000028632174,0.00043653863,0.00027935923,0.00010579955,0.00004936726],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031198162,0.00037746076,0.0013368204,0.0006357156,0.00003200072,0.000011021168,0.00013179154,0.00030740202,0.00007286468],"category_scores_gemma":[0.000051116614,0.0002805389,0.00010069813,0.00042607824,0.0000049683513,0.00013503656,0.000109121735,0.00035826484,0.00001578868],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032344658,0.0017482355,0.09595472,0.014227918,0.00021248538,0.000010789628,0.0002310199,0.000004920543,0.00024273695,0.000040763316,0.000114333125,0.8839776],"study_design_scores_gemma":[0.03621256,0.0018172113,0.57880753,0.09318057,0.001538128,0.00018956127,0.00009717824,0.000051723564,0.00007719937,0.00006116646,0.2864998,0.0014673528],"about_ca_topic_score_codex":0.0006785249,"about_ca_topic_score_gemma":0.0014443735,"teacher_disagreement_score":0.88251024,"about_ca_system_score_codex":0.00012726428,"about_ca_system_score_gemma":0.00011602594,"threshold_uncertainty_score":0.99996465},"labels":[],"label_agreement":null},{"id":"W917250470","doi":"10.1371/journal.pone.0133209","title":"Correlation of Real Time PCR Cycle Threshold Cut-Off with Bordetella pertussis Clinical Severity","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Medicine; Bordetella pertussis; Indeterminate; Context (archaeology); Internal medicine; Gold standard (test); Public health; Gastroenterology; Pediatrics; Pathology; Biology","score_opus":0.05243706455503137,"score_gpt":0.27267345779944097,"score_spread":0.2202363932444096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W917250470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937686,0.00014015971,0.000012396529,0.00015471701,0.00021785172,0.00014666628,0.000022124597,0.000064907224,0.0054725916],"genre_scores_gemma":[0.9967392,0.00015021487,0.00019023052,0.000021985914,0.00008649016,0.0000071396166,0.000085059466,0.000012163306,0.00270748],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992762,0.00010647718,0.00027894406,0.00017168149,0.000024880108,0.00014179669],"domain_scores_gemma":[0.9993519,0.000083325795,0.00012347243,0.00022363632,0.00018664412,0.00003099502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023510974,0.00009636085,0.00030119118,0.0000398097,0.000060064256,0.000006983167,0.00007526096,0.00021818792,0.00051397923],"category_scores_gemma":[0.00008630411,0.000074782954,0.000046103683,0.000092454655,0.00009889364,0.0000857772,0.00004184555,0.00017178962,0.00044951288],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022864374,0.005939714,0.5447906,0.000053272594,0.0014221871,0.0000020644686,0.0004712562,0.00002324489,0.43410492,0.0002965513,0.0068418127,0.003767943],"study_design_scores_gemma":[0.015391914,0.008589882,0.7238696,0.0006296056,0.0017175646,0.00010050295,0.0003259269,0.0027033314,0.22904715,0.00081862445,0.0154343145,0.0013715483],"about_ca_topic_score_codex":0.00018101824,"about_ca_topic_score_gemma":0.000057228142,"teacher_disagreement_score":0.20505776,"about_ca_system_score_codex":0.000016418733,"about_ca_system_score_gemma":0.00005887647,"threshold_uncertainty_score":0.57777286},"labels":[],"label_agreement":null},{"id":"W944717703","doi":"10.1074/jbc.m115.672469","title":"The Protein BpsB Is a Poly-β-1,6-N-acetyl-d-glucosamine Deacetylase Required for Biofilm Formation in Bordetella bronchiseptica","year":2015,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Bordetella bronchiseptica; Biofilm; Glucosamine; Chemistry; Microbiology; Bordetella; Biochemistry; Bacteria; Biology","score_opus":0.03679690197933241,"score_gpt":0.2729627138629371,"score_spread":0.23616581188360466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W944717703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943676,0.0027779273,0.00016234783,0.0018442492,0.00027367033,0.00020965356,0.000022171438,0.000014434277,0.0003279609],"genre_scores_gemma":[0.9986041,0.00013891529,0.0003191095,0.00006113355,0.00020507438,0.000026500036,0.00002962434,0.000007014851,0.00060848123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988732,0.00007671105,0.00062894856,0.00012433114,0.00002363548,0.0002732188],"domain_scores_gemma":[0.9990758,0.00012357344,0.00040124793,0.00014149067,0.0002060045,0.000051940384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059373386,0.00014266786,0.00027427298,0.000029723942,0.00012316988,0.00003155097,0.00021292901,0.00032913114,0.000107509644],"category_scores_gemma":[0.00070780434,0.000080254795,0.00015196174,0.00011264959,0.00011460091,0.00010070655,0.000050810446,0.00027270336,0.00001669647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007903317,0.00011415898,0.00019870627,0.000014267523,0.00003757565,0.0000014418323,0.00005832321,5.337879e-7,0.991647,0.000028476798,0.0032825693,0.003826583],"study_design_scores_gemma":[0.0022941176,0.0006851651,0.00022257157,0.000039461032,0.000014637798,0.00029053024,0.00025776442,0.000009271819,0.89400375,0.00037769024,0.101696484,0.00010854699],"about_ca_topic_score_codex":0.000008909769,"about_ca_topic_score_gemma":0.0000047634453,"teacher_disagreement_score":0.098413914,"about_ca_system_score_codex":0.00007972401,"about_ca_system_score_gemma":0.00005729091,"threshold_uncertainty_score":0.32726955},"labels":[],"label_agreement":null},{"id":"W97172722","doi":"10.1093/pch/16.1.9","title":"Case 1: Immunizations: Are their administration and reactions ever ‘routine’?","year":2011,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Administration (probate law); Medicine; Pediatrics; Political science","score_opus":0.030865673388916652,"score_gpt":0.2589983235683826,"score_spread":0.22813265017946593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W97172722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98888826,0.0053992583,0.00042698154,0.0014951833,0.0014163335,0.00038805883,0.00015952603,0.00016280869,0.0016635763],"genre_scores_gemma":[0.9965164,0.0025531545,0.00016272224,0.00024505617,0.00015697461,0.000018846516,0.00013132542,0.000014671722,0.00020085572],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990655,0.00015755407,0.00033187,0.0002023757,0.000009534239,0.00023312547],"domain_scores_gemma":[0.9993365,0.000070933354,0.00023616794,0.00022528614,0.00008484266,0.000046266035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025766518,0.00013301085,0.00018180526,0.00013960597,0.0007954754,0.0000170436,0.00005453322,0.00015211433,0.00029416246],"category_scores_gemma":[0.00007676785,0.00011501211,0.000042708783,0.0002530647,0.000041893967,0.00012969063,0.00003932587,0.00025919266,0.00006615587],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008248799,0.0054602227,0.77580315,0.0008655649,0.0010172201,0.00015065965,0.033528283,0.000008569022,0.0057225837,0.06254629,0.044622503,0.0694501],"study_design_scores_gemma":[0.0037183324,0.0013487404,0.78390956,0.00010743395,0.00018315519,0.02168612,0.0056400085,0.00001956324,0.0023906932,0.0014332399,0.1785992,0.00096393767],"about_ca_topic_score_codex":0.0007789708,"about_ca_topic_score_gemma":0.0003767516,"teacher_disagreement_score":0.1339767,"about_ca_system_score_codex":0.0000323419,"about_ca_system_score_gemma":0.00009407028,"threshold_uncertainty_score":0.61182344},"labels":[],"label_agreement":null},{"id":"W98243737","doi":"10.1093/pch/10.4.221","title":"Case 1: The deadly danger of pertussis","year":2005,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Crackles; Respiratory rate; Tachypnea; Anesthesia; Chest radiograph; Emergency department; Pulse oximetry; Physical examination; Heart rate; Internal medicine; Lung; Blood pressure; Tachycardia","score_opus":0.015257780294132745,"score_gpt":0.26143754935497404,"score_spread":0.2461797690608413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W98243737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9645127,0.01647948,0.00009769964,0.015396194,0.0012022747,0.000294133,0.00008816935,0.00006041495,0.0018689126],"genre_scores_gemma":[0.996491,0.0014991037,0.00010858293,0.0010275728,0.00050599466,0.000010192021,0.000027623355,0.000011090228,0.000318838],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991075,0.00015431826,0.0003115572,0.00014581313,0.000013648537,0.0002671776],"domain_scores_gemma":[0.99935395,0.0001442757,0.00016651703,0.00025305766,0.00005435973,0.000027859001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037194838,0.00010286623,0.00019750696,0.000085879336,0.00043626706,0.000007716665,0.000104943545,0.00011124742,0.00039745987],"category_scores_gemma":[0.000054403394,0.00006564687,0.00008652751,0.000221198,0.00004738386,0.000049697406,0.000046435096,0.00024781554,0.00015947506],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023612024,0.0017513935,0.07718626,0.00028369477,0.00049623125,0.000021961467,0.009526608,0.00006514776,0.0068439743,0.018247487,0.26660702,0.6187341],"study_design_scores_gemma":[0.0011053199,0.0002549825,0.027154703,0.000012840862,0.00006585088,0.0025969981,0.00026217502,0.000008894637,0.0012167721,0.000049371127,0.9670822,0.000189889],"about_ca_topic_score_codex":0.001016993,"about_ca_topic_score_gemma":0.00050439243,"teacher_disagreement_score":0.7004752,"about_ca_system_score_codex":0.00003594967,"about_ca_system_score_gemma":0.00007663333,"threshold_uncertainty_score":0.43519068},"labels":[],"label_agreement":null}]}